mRNA_7335 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|168050
Unique NamemRNA_7335
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A835YXT5_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT5_9STRA)

HSP 1 Score: 609 bits (1570), Expect = 1.570e-220
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1
Query:    1 MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAEDYPASLIA 885
            MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAEDYPASLIA
Sbjct:    1 MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAEDYPASLIA 295          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: D8LCB9_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB9_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 6.210e-141
Identity = 207/301 (68.77%), Postives = 238/301 (79.07%), Query Frame = 1
Query:   25 INLVSAGEEGTLEYRIQHVMEDH--DSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAE------------DYPASLIA 885
            +N+  +GEEGTL+YR++  M +H    +VIS WHDIPLYV DE + K TG LNFVCEIPRCSRKKFEIAT E GNPIKQD KKG+LREFKKGDIFFNYGCFPRTWEDPEH HPDT   GDNDPLDVCEIG+RIV TGDVRQVKVLGVLAMID+ ETDWKVI ID +DRWAPELNDVEDVERLLPGVV +IREWFRTYK+PDGKP N F L ERCM R+YAMKV++EC+LAW+ LV  A LG EV  NLSVS+L+D+ +++E +   SA++ LE  +DG               +YP SLIA
Sbjct:   25 LNIFESGEEGTLDYRLRFAMAEHAHSQQVISVWHDIPLYVRDE-AEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTKFPGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDREDRWAPELNDVEDVERLLPGVVPAIREWFRTYKVPDGKPENKFALDERCMGRSYAMKVVSECHLAWRNLVGKAELG-EVKSNLSVSRLSDMGSDIELE---SATNALEDEADGXXXXXXXXXXXXXEGEYPTSLIA 320          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A7S2V803_9STRA (Inorganic diphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V803_9STRA)

HSP 1 Score: 382 bits (981), Expect = 5.370e-130
Identity = 188/293 (64.16%), Postives = 220/293 (75.09%), Query Frame = 1
Query:    4 RRNSNSSINLVSAGEEGTLEYRIQHV--MEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEA----TSDGEAED 864
            RR S+ ++     G   TLEYRIQHV   +  + +V+S WHD+PLY  DE+  + TG LNFVCEIPRCSRKK+EIAT EPGNPIKQDEKKG LR FKKGDIFFNYGCFPRTWEDP+  HPD G  GDNDPLDVCEIG+RIVPT +VRQVK+LGVL +IDDGE DWK+IAID  DRWAPELND++DVERLLPGV+ +IREWFRTYK+PDGKP NVFGL ERCMP+ YAM V+ EC+ AWK LV+      +  +NLSV  L DL+ E +P         L+A      DG+ ED
Sbjct:   58 RRRSSGTLVTEEVGHADTLEYRIQHVELTDSEEKRVLSLWHDLPLYCTDEYGLR-TGSLNFVCEIPRCSRKKYEIATDEPGNPIKQDEKKGQLRVFKKGDIFFNYGCFPRTWEDPDFVHPDVGVGGDNDPLDVCEIGIRIVPTAEVRQVKILGVLCLIDDGEADWKIIAIDETDRWAPELNDMDDVERLLPGVIGTIREWFRTYKVPDGKPENVFGLEERCMPKEYAMHVVAECHQAWKGLVTQQ----KPAKNLSVVNLKDLVMEADPSTDAPPQHQLDAYNAPAGDGDDED 345          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A6U4FME2_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FME2_9STRA)

HSP 1 Score: 360 bits (923), Expect = 5.100e-120
Identity = 168/242 (69.42%), Postives = 196/242 (80.99%), Query Frame = 1
Query:    4 RRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSN 729
            ++ S+SS++L S G+EGT  +R+Q   E   ++ IS WHD+ L+  +E SN  TG LNFVCEIP+ SRKKFE+AT EP NPIKQD KKG+LREFKKGDIFFNYGCFPRTWEDP   HPD G  GDNDPLDVCEIG++IVPTG VRQVKVLG L MIDDGE DWKVI ID +DRWAP+LNDVEDVERLLPG V ++REWFRTYKIPDGKPPN FGL ERCMPR YAM+++ E + AW+ LV +
Sbjct:  138 KKRSHSSVSLSSLGDEGTQSHRVQAACE-RSNEPISFWHDVALFHREEESNAATGALNFVCEIPKFSRKKFEVATNEPQNPIKQDTKKGMLREFKKGDIFFNYGCFPRTWEDPCFVHPDAGVGGDNDPLDVCEIGLQIVPTGAVRQVKVLGCLCMIDDGEADWKVIVIDVNDRWAPDLNDVEDVERLLPGTVSAVREWFRTYKIPDGKPPNRFGLNERCMPREYAMQIVGETHHAWRRLVQH 378          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: B8C276_THAPS (Inorganic diphosphatase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C276_THAPS)

HSP 1 Score: 346 bits (887), Expect = 2.240e-116
Identity = 169/268 (63.06%), Postives = 203/268 (75.75%), Query Frame = 1
Query:   13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGG---------EVPRNLSVSKLTDL 786
            SNS+++L+S G+E T EYRI+ V +   SK IS WHD+ L  +D  +++PT  LNFVCEIP+ SRKKFEIAT E GN IKQDEKKGVLREFKKGDIFFNYGC PRTWEDP + HPD  GC GDNDP+DVCEIG RIV TG++R VKVLG+L MID+GE DWKV+ IDA+D+WAP LNDV+DVE+ LPG + +IREWFRTYKIPDGKPPNVFGL E+ M + YA+++I EC  AWK L++     G          + R LS S L DL
Sbjct:   28 SNSNLDLLSHGDENTTEYRIKAVDKAGSSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFSRKKFEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTYIHPDAEGCRGDNDPVDVCEIGARIVKTGEIRPVKVLGILCMIDEGEADWKVVTIDAEDKWAPFLNDVDDVEKHLPGTLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKDLITGEKERGMEHCDDTVKTLVRKLSKSNLVDL 295          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A6S8XBJ4_9STRA (Inorganic diphosphatase n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S8XBJ4_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.780e-113
Identity = 168/273 (61.54%), Postives = 201/273 (73.63%), Query Frame = 1
Query:   13 SNSSINLVSAGEEGTLEYRIQHVMED---HDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGG---------EVPRNLSVSKLTDLMA 792
            SN+++ LV  GE  TLEYRI+ V ++      K IS WHDI L  +D  +++PT  LNFVCEIP+ +RKK+EIAT E GN IKQDEKKG LREFKKGDIFFNYGC PRTWEDP   HPD  GC GDNDPLDVCEIG +IVPTGDVR VK+LGVL MID+GE DWKV+ IDA+D+WAP LND+ DVE+ LPG + +IREWFRTYKIPDGKPPNVFGL E+ M ++YA+++I EC  AWK L++               ++ R LS S L DL A
Sbjct:   26 SNANLALVGTGESDTLEYRIKAVEKEGINKGKKEISLWHDITLVHVDPATDRPTPYLNFVCEIPKFTRKKYEIATDEVGNAIKQDEKKGKLREFKKGDIFFNYGCLPRTWEDPTFIHPDAEGCRGDNDPLDVCEIGAKIVPTGDVRPVKILGVLCMIDEGEADWKVVVIDAEDKWAPFLNDINDVEKHLPGQLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKSYALEIIKECNHAWKELITGEKERKMEHLDEGVKKLVRKLSKSNLVDLAA 298          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: K0RW68_THAOC (Inorganic diphosphatase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RW68_THAOC)

HSP 1 Score: 338 bits (866), Expect = 3.130e-113
Identity = 169/272 (62.13%), Postives = 205/272 (75.37%), Query Frame = 1
Query:   13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVS----------NASLGGEVPRNLSVSKLTDLMAE 795
            S+S++ L S G+E T E+RI+   +   SK IS WHD+ L  +D  +++PT  LNFVCEIP+ +RKKFEIAT E GN IKQDEKKGVLREFKKGDIFFNYGC PRTWEDP   HPD  GC GDNDP+DVCEIG RI+ TGD+R VKVLG+L MID+GE DWKV+ IDA+D+WAP LNDV+DVE+LLPG + +IREWFRTYKIPDGKPPNVFGL E+ M + YA+++I EC  AWK L++          +A + G V R LS S L DL A+
Sbjct:   26 SSSNLELSSHGDEQTTEFRIK-ASDKSGSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFTRKKFEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTFVHPDAEGCRGDNDPVDVCEIGSRIIGTGDIRPVKVLGILCMIDEGEADWKVVTIDAEDKWAPFLNDVDDVEKLLPGTLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKELITGEKERNLEKCDAEVRGLV-RKLSKSNLLDLDAD 295          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A6V1AFR6_9STRA (Inorganic diphosphatase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V1AFR6_9STRA)

HSP 1 Score: 337 bits (865), Expect = 4.430e-113
Identity = 166/271 (61.25%), Postives = 205/271 (75.65%), Query Frame = 1
Query:   13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVS----------NASLGGEVPRNLSVSKLTDLMA 792
            S++++ ++S G+E TLEYRI+   +   SK IS WHD+ L  +D  +++PT  LNFVCEIP+ SRKK+EIAT E GN IKQDEKKGVLREFKKGDIFFNYGC PRTWEDP   HPD  GC GDNDP+DVCEIG +IV TG++R VK+LG+L MID+GE DWKV+AIDA+D+WAP LND++DV + LPG +D+IREWFRTYKIPDGKPPNVFGL E+ M + YA+++I EC  AWK L++          N  + G V R LS S L DL A
Sbjct:   26 SSNNLEILSHGDEDTLEYRIK-ASDKTGSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFSRKKYEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTFVHPDAEGCRGDNDPVDVCEIGSKIVKTGEIRPVKILGILCMIDEGEADWKVVAIDAEDKWAPFLNDIDDVAKQLPGTLDAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKDLITGEKERQLEQCNDEVKGLV-RRLSKSNLVDLSA 294          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A7S3VDZ4_9STRA (Inorganic diphosphatase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDZ4_9STRA)

HSP 1 Score: 336 bits (862), Expect = 6.610e-113
Identity = 165/268 (61.57%), Postives = 201/268 (75.00%), Query Frame = 1
Query:   13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSN------ASLGGEVP---RNLSVSKLTDL 786
            SNS++ L+  GE   L YR++ V +    K IS WHD+ L  +D  +++PT  LNFVCEIP+ SRKK+EIAT E GNPIKQDEKKGVLREFKKGDIFFNYGC PRTWEDP   HPD  GC GDNDP+DVCEIG++IV  GDVR VK+LG+L MID+GE DWKV+ IDA+D+WAP LND+ DVE  LPG +D+IREWFRTYKIPDGKPPNVFGL E+ M ++YA+++I EC  AWK L++       +S+G +V    R LS S L  L
Sbjct:    9 SNSNLQLLHEGE--GLNYRMKTVPKVGGKKDISLWHDVTLVHVDPTTSRPTPYLNFVCEIPKFSRKKYEIATDEVGNPIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTFVHPDAEGCRGDNDPVDVCEIGLKIVKPGDVRPVKILGILCMIDEGEADWKVVTIDAEDKWAPYLNDINDVEEQLPGTLDAIREWFRTYKIPDGKPPNVFGLDEKFMDKSYALEIIKECNHAWKELITGEKERKISSMGDDVQKLVRKLSKSNLLSL 274          
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A7S0AEZ5_9STRA (Inorganic diphosphatase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEZ5_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.680e-112
Identity = 158/229 (69.00%), Postives = 183/229 (79.91%), Query Frame = 1
Query:   37 SAGEEGTLEYRIQHVMED---HDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAW 711
            S GEEGTLEYRI+   +D      K IS WHD+ L  +D  +++PT  LNFVCEIP+ SRKK+EIAT E GNPIKQDEKKG LREFKKGDIFFNYGC PRTWEDP   HPD  GC GDNDP+DVC+IGMRIV  G++R VKVLG+L MID+GE DWKV+AIDA+D+WAP LND+ DVE+ LPG +D+IREWFRTYKIPDGKPPNVFGLGER M + Y ++VI EC  AW
Sbjct:    2 SHGEEGTLEYRIKAHEKDGVAKGKKEISLWHDVTLVHIDPATDRPTPYLNFVCEIPKFSRKKYEIATDEVGNPIKQDEKKGKLREFKKGDIFFNYGCLPRTWEDPTFFHPDAEGCRGDNDPVDVCDIGMRIVQPGEIRPVKVLGILCMIDEGEADWKVVAIDAEDKWAPFLNDINDVEKHLPGQLDAIREWFRTYKIPDGKPPNVFGLGERFMDKAYCLEVIKECNHAW 230          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXT5_9STRA1.570e-220100.00Inorganic diphosphatase n=1 Tax=Tribonema minus Ta... [more]
D8LCB9_ECTSI6.210e-14168.77Inorganic diphosphatase n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V803_9STRA5.370e-13064.16Inorganic diphosphatase n=1 Tax=Fibrocapsa japonic... [more]
A0A6U4FME2_9STRA5.100e-12069.42Inorganic diphosphatase n=1 Tax=Phaeomonas parva T... [more]
B8C276_THAPS2.240e-11663.06Inorganic diphosphatase n=1 Tax=Thalassiosira pseu... [more]
A0A6S8XBJ4_9STRA1.780e-11361.54Inorganic diphosphatase n=2 Tax=Lithodesmiaceae Ta... [more]
K0RW68_THAOC3.130e-11362.13Inorganic diphosphatase n=1 Tax=Thalassiosira ocea... [more]
A0A6V1AFR6_9STRA4.430e-11361.25Inorganic diphosphatase n=1 Tax=Skeletonema marino... [more]
A0A7S3VDZ4_9STRA6.610e-11361.57Inorganic diphosphatase n=1 Tax=Chaetoceros debili... [more]
A0A7S0AEZ5_9STRA1.680e-11269.00Inorganic diphosphatase (Fragment) n=1 Tax=Minutoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_55contigContig_55:771801..775209 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|168050|e_gw1.55.196.1
BRITEko00000,ko00001,ko01000
KEGG Pathwayko00190,map00190
KEGG koko:K01507
EC3.6.1.1
Descriptioninorganic diphosphatase activity
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0221@1|root,KOG1626@2759|Eukaryota
Evalue1.02e-141
Seed ortholog2880.D8LCB9
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioninorganic pyrophosphatase
Ec32 orthologEc-14_005330.1
TranscriptId168372
TrackFilteredModels1
ProteinId168050
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168050gene_7335Tribonema minus UTEX_B_3156 geneContig_55 771801..775209 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7335_1exon_7335_1Tribonema minus UTEX_B_3156 exonContig_55 771801..771875 +
exon_7335_2exon_7335_2Tribonema minus UTEX_B_3156 exonContig_55 773134..773340 +
exon_7335_3exon_7335_3Tribonema minus UTEX_B_3156 exonContig_55 773807..773980 +
exon_7335_4exon_7335_4Tribonema minus UTEX_B_3156 exonContig_55 774778..775209 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7335CDS_7335Tribonema minus UTEX_B_3156 CDSContig_55 771801..771875 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168050Trimin1|168050|e_gw1.55.196.1Tribonema minus UTEX_B_3156 polypeptideContig_55 771801..775209 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7335 ID=mRNA_7335|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=888bp|location=Sequence derived from alignment at Contig_55:771801..775209+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGCGCAACAGCAACTCCTCTATCAATCTGGTGTCTGCGGGAGAGGA
GGGCACATTGGAGTACCGCATACAGCACGTGATGGAGGACCACGACAGCA
AGGTCATCTCCGCCTGGCACGACATCCCCCTCTACGTGCTGGACGAATTC
AGCAACAAGCCCACAGGGCTGCTCAACTTTGTGTGTGAGATCCCCCGCTG
CTCGCGCAAGAAGTTTGAGATTGCCACCAAGGAGCCCGGAAACCCCATCA
AGCAGGACGAGAAGAAGGGCGTGCTCAGAGAGTTCAAGAAGGGCGACATC
TTCTTCAACTACGGCTGCTTCCCCCGCACGTGGGAGGACCCTGAGCACAG
CCACCCTGACACGGGGTGCGCAGGCGACAATGACCCGCTGGACGTGTGTG
AGATTGGCATGCGCATTGTGCCCACCGGCGATGTGCGCCAGGTCAAGGTC
TTGGGGGTACTGGCAATGATTGATGACGGCGAAACCGACTGGAAGGTCAT
TGCCATTGACGCAGACGACAGGTGGGCCCCCGAGCTCAACGACGTGGAGG
ACGTAGAGCGCCTGCTGCCAGGTGTCGTCGACTCCATCCGCGAGTGGTTC
AGGACGTACAAGATCCCTGACGGCAAGCCCCCCAACGTCTTTGGCCTGGG
CGAGCGCTGCATGCCCCGCACCTACGCCATGAAGGTCATCAACGAGTGCT
ACCTGGCCTGGAAGACGCTGGTCAGCAATGCGAGCCTGGGGGGAGAGGTG
CCTCGCAACCTCAGCGTGTCCAAGCTCACGGACCTCATGGCAGAGTTGGA
GCCAGACCACGTGCTCAGCGCGAGCGATCACCTAGAGGCCACCTCAGACG
GCGAGGCAGAGGACTACCCTGCATCGCTCATCGCCTGA
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protein sequence of jgi.p|Trimin1|168050

>Trimin1|168050|e_gw1.55.196.1 ID=Trimin1|168050|e_gw1.55.196.1|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=296bp
MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEF
SNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDI
FFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKV
LGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWF
RTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEV
PRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAEDYPASLIA*
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mRNA from alignment at Contig_55:771801..775209+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7335 ID=mRNA_7335|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3409bp|location=Sequence derived from alignment at Contig_55:771801..775209+ (Tribonema minus UTEX_B_3156 )
ATGCGGCGCAACAGCAACTCCTCTATCAATCTGGTGTCTGCGGGAGAGGA GGGCACATTGGAGTACCGCATACAGGTGATCTCAAACTTCAAGTATATAA TAAGAAAGGGGAGGGAAACAAGAATTCAACAAGTCATACTGTTTGAGGCA TTTCAGTGACCACACACGTACAGTGAAAGCGCGGTTTACGCTGGGGGCCT GGGCCGCACACACTCAGAAATGCACAAGACCTACATGGCGGTTCCTTTGA GTGGTGACGTCTGATCATGAAAAAAAACCATCGCATGGTCAAACGTGATA TAGCCTACGTCTTGTCAGCATAAGCTAACAAGCCGAATGTGTGAGGACAC GACTCATGCAGTATTCACAGCACTAGCCTTCTCGATACGTGGCAGGTCTG AGGCCCCTGGCCTTGCCCTAACTTTGCCTCTATCCCAGAATAACGGTTTG TGCGCCAGAGACTCTGGTCACTTGCAAGTGAGGCACTTCAAGAGGCAATT CAAAGTTGAACACGCACGCTCTCACAGTGCGTCAGCAGTAGATTTTCATG CAGACGTGCGGACTGCATCCTCTGAGCAGTCCTCTTGATGCTATCAAGTA TGCTACTGTGACCGACCGGATGAGCATGCAGCTACTGCGGTGGCATTTCG ACTTTACCATGGCAAGCTCGGCAACATTGCTGACATATGAGCTACTTGAA AAAAGGTGGCTAATGACACAGGTATCATTGTAGTTTTGTGGCAAATGCCT GTTGAGATGGCTGTATAGCATATTGCGATGGTCCAGTGAATGATTGGTCC ACATTCTGGTCTAGAGGCTCTCATTAAAATCCACGGGTTCTCATGTTCAG CTCCAACAGCACGCAGAGCTACCTGCTGCCGGTGCGGCCCAGATGTTACT GTCTGGAGCGATACAAATCGTCATGATGTAGAAGTATACATGTACGCCTA TTAAGATTAGAGGCAATAGAGGCACTGACTTATGCATCCCCATATATGTC TTATTTGGTATTGGTTTGTGTCAGCTAGCTTTGATGGGCATTAGCACAAA CTAGCTCATTGTATCCCTGATGCTTGCTCGGTGAGGGTGTTGCTTGCATT TGAAGCACTCATCCCAAGTCATGCATACATACATGCAGATGTGAAAATGG CTTTATGAGTACGTATGGGGGGGGGGGTCATCAGGTTGCAATTGTAGTGC ATCTGAGCATACACTTGATGTTCACTCTCAAATCTCAGTCCTTCACTTTC ATATACGCGTCGTATCTGAATCATTGACTGCTCATGGATCCTAAGACTCA CTCACGTCCACTCTCCACTCACCCATTGCTCAGCACGTGATGGAGGACCA CGACAGCAAGGTCATCTCCGCCTGGCACGACATCCCCCTCTACGTGCTGG ACGAATTCAGCAACAAGCCCACAGGGCTGCTCAACTTTGTGTGTGAGATC CCCCGCTGCTCGCGCAAGAAGTTTGAGATTGCCACCAAGGAGCCCGGAAA CCCCATCAAGCAGGACGAGAAGAAGGGCGTGCTCAGAGAGGTGAGGTTAC ATCTTCTGGATTCTTGAAGATTATTGCTTTACCAAAGTGGTAGCATCTTG TAGATTGTAGGACATTGGTCTTCTCCTGAGGGGGTTGGGTGGCAGTGTTC AGCAGCTAGCTGCACAGTGCTCAACGGCATCAGTTCCACTGCTCAGCCGC TACTGCCACAGTGCTCAGAGAAGTCGGTGGCAGCGCTCATCGGTTGCTGG TGTCGCGGATGTGCCTTACAAACATCAGCCATGATGCTGACAAGTCTTGT GGGCTTGACTGACATGAGGGCTTGAGACTTGTGATCAAAGTTCATTGAAA TTCATCATGGCACCCGCAGCAATCATGCTGTGTGCTGCAGCTCAACACAA AGACGCACGGAAAAATGCTGACCGGTCCGCCTTTTACCTACATGCATCAT ACCTGCAAGCACCCCCTGAAAGCCGCACTTGCACTGCCTGTTCACGTCCA TTTCAGTTCAAGAAGGGCGACATCTTCTTCAACTACGGCTGCTTCCCCCG CACGTGGGAGGACCCTGAGCACAGCCACCCTGACACGGGGTGCGCAGGCG ACAATGACCCGCTGGACGTGTGTGAGATTGGCATGCGCATTGTGCCCACC GGCGATGTGCGCCAGGTCAAGGTCTTGGGGGTAAGTAGGAATAGTTAGGC TTCCACACATCGGCGCTTGACATGACAAGACACGTGTTGCAAGAACACAT GGATGGGTTGCATAGTGTACATACTGTGCGCTAGGGTTAGGATTAGGTTC AGGAGTTTGATTGATGCGTGGGTAGTTTGTAGTTTGAGTGCAGGTGTGTC CATACATTGAAGCACTATGTCGAGTCACCCATGCTCTTTCAGTAGCAAAA TGGCAGCTTGATGATGCCTTCAATGACTGGGGACATGTAGTGCGCTAATC CTAACTTGCTAACTAACCCAAAGGCGCAAATCGTCACCGCCATGAGCTTT GTGTGCATACTTACCTGAATGGCAGTCCATAGGGCAAGGAAACCAGGTTG ACCTCAATGCAATTGCTGTTGGTTTGCCTCAGAGTAGTGGGCTTTTAGCT TTGAGCCATGCTTGGCGTGTCGGACTGCAACAGTGTCTGTTGGATGTTTT TGGAGAGCACCACTGGTTCATCACCTGCAAGAGCCCATTCACCCCTGTGA GCACGTGCAGTCCTCAACCAGATAAATCCATGTGACACCTTGAACTTTTC AGTCAATCGTATTTTGCAGGTGCCATATCAACAACATGTACTGTACAGGT GCTGGCCATCATTAGTATTGGCCATCATCAATACCAAAACATGCCATCAG CACTGAGAACACGACATTGAGGACCTACGAGCTGGTATATAGAAGTATAA GGAAATGTGGGACCGCATTGACTGCCACGTGTCTCACCGCGCCCATTTGC ATATGGTCCCCTGGTACGCAACTGCAGGTACTGGCAATGATTGATGACGG CGAAACCGACTGGAAGGTCATTGCCATTGACGCAGACGACAGGTGGGCCC CCGAGCTCAACGACGTGGAGGACGTAGAGCGCCTGCTGCCAGGTGTCGTC GACTCCATCCGCGAGTGGTTCAGGACGTACAAGATCCCTGACGGCAAGCC CCCCAACGTCTTTGGCCTGGGCGAGCGCTGCATGCCCCGCACCTACGCCA TGAAGGTCATCAACGAGTGCTACCTGGCCTGGAAGACGCTGGTCAGCAAT GCGAGCCTGGGGGGAGAGGTGCCTCGCAACCTCAGCGTGTCCAAGCTCAC GGACCTCATGGCAGAGTTGGAGCCAGACCACGTGCTCAGCGCGAGCGATC ACCTAGAGGCCACCTCAGACGGCGAGGCAGAGGACTACCCTGCATCGCTC ATCGCCTGA
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Coding sequence (CDS) from alignment at Contig_55:771801..775209+

>mRNA_7335 ID=mRNA_7335|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=888bp|location=Sequence derived from alignment at Contig_55:771801..775209+ (Tribonema minus UTEX_B_3156 )
ATGCGGCGCAACAGCAACTCCTCTATCAATCTGGTGTCTGCGGGAGAGGA
GGGCACATTGGAGTACCGCATACAGCACGTGATGGAGGACCACGACAGCA
AGGTCATCTCCGCCTGGCACGACATCCCCCTCTACGTGCTGGACGAATTC
AGCAACAAGCCCACAGGGCTGCTCAACTTTGTGTGTGAGATCCCCCGCTG
CTCGCGCAAGAAGTTTGAGATTGCCACCAAGGAGCCCGGAAACCCCATCA
AGCAGGACGAGAAGAAGGGCGTGCTCAGAGAGTTCAAGAAGGGCGACATC
TTCTTCAACTACGGCTGCTTCCCCCGCACGTGGGAGGACCCTGAGCACAG
CCACCCTGACACGGGGTGCGCAGGCGACAATGACCCGCTGGACGTGTGTG
AGATTGGCATGCGCATTGTGCCCACCGGCGATGTGCGCCAGGTCAAGGTC
TTGGGGGTACTGGCAATGATTGATGACGGCGAAACCGACTGGAAGGTCAT
TGCCATTGACGCAGACGACAGGTGGGCCCCCGAGCTCAACGACGTGGAGG
ACGTAGAGCGCCTGCTGCCAGGTGTCGTCGACTCCATCCGCGAGTGGTTC
AGGACGTACAAGATCCCTGACGGCAAGCCCCCCAACGTCTTTGGCCTGGG
CGAGCGCTGCATGCCCCGCACCTACGCCATGAAGGTCATCAACGAGTGCT
ACCTGGCCTGGAAGACGCTGGTCAGCAATGCGAGCCTGGGGGGAGAGGTG
CCTCGCAACCTCAGCGTGTCCAAGCTCACGGACCTCATGGCAGAGTTGGA
GCCAGACCACGTGCTCAGCGCGAGCGATCACCTAGAGGCCACCTCAGACG
GCGAGGCAGAGGACTACCCTGCATCGCTCATCGCCTGA
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