mRNA_7265 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|168192
Unique NamemRNA_7265
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A836CAY7_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY7_9STRA)

HSP 1 Score: 1333 bits (3449), Expect = 0.000e+0
Identity = 775/775 (100.00%), Postives = 775/775 (100.00%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKGGMPVGSAAKSAPVAAAKAPPAAGDRHSISPTPLLTPLPAAPAAATGPGADIAAQITAVGDKIRDLKKAKADKAELKPHIDQLLQLKTQFKEATGAEYGAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIAAKIASTGDAIRDLKKAKADKAQLQPYIDALLDLKRQYKEATGADYAAPGAXXXXXXXXXXXXXXXXATDGGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPCTAVSDAGAIDFGALNAYLLAHSYVGGWLPSARDDKAAEAIVNGALHAEARQHPNVARWLEHMETFTAVERAAWQ 2325
            MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKGGMPVGSAAKSAPVAAAKAPPAAGDRHSISPTPLLTPLPAAPAAATGPGADIAAQITAVGDKIRDLKKAKADKAELKPHIDQLLQLKTQFKEATGAEYGAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIAAKIASTGDAIRDLKKAKADKAQLQPYIDALLDLKRQYKEATGADYAAPGAXXXXXXXXXXXXXXXXATDGGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPCTAVSDAGAIDFGALNAYLLAHSYVGGWLPSARDDKAAEAIVNGALHAEARQHPNVARWLEHMETFTAVERAAWQ
Sbjct:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKGGMPVGSAAKSAPVAAAKAPPAAGDRHSISPTPLLTPLPAAPAAATGPGADIAAQITAVGDKIRDLKKAKADKAELKPHIDQLLQLKTQFKEATGAEYGAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIAAKIASTGDAIRDLKKAKADKAQLQPYIDALLDLKRQYKEATGADYAAPGAXXXXXXXXXXXXXXXXATDGGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPCTAVSDAGAIDFGALNAYLLAHSYVGGWLPSARDDKAAEAIVNGALHAEARQHPNVARWLEHMETFTAVERAAWQ 775
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: D7FT02_ECTSI (Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT02_ECTSI)

HSP 1 Score: 766 bits (1978), Expect = 2.240e-268
Identity = 438/655 (66.87%), Postives = 502/655 (76.64%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKGGMPVGSAAKSAPVAAAKAPP------------AAGDRHSISPTPLLTPLPAAPAAATGPGAD-IAAQITAVGDKIRDLKKAKADKAELKPHIDQLLQLKTQFKEATGAEYGAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIAAKIASTGDAIRDLKKAKADKAQLQPYIDALLDLKRQYKEATGADYAAPGA 1926
            MP+DI  FR +    P+L+RESQRRRF  V +VDE+I +D+ WR  R ++D L K+RNR QK+V  ++K G  D E  A+IK + +E+K  EA++  L ++ ++LLPKIGNIVA DVP SNDEEKDN+V    GP PTGE+Y HHHEVL+RIGGYEPERGV VAGHRAYFLRDAGLLLNQALI +G+AFL +R YSVLQPPYFM+KDVM+GVAQLEQFDEELYKV G G EEKYLIATSEQP+CAFHKGEWL E+ LPLRYGG+STCFRKEAG+HGKDTWGIFRVHQFEKVEQF ICEGD EKS AMQ EM KA+EEFYQ+LG+SYRVVNIVSGELNNAA+KKYDLEAWFP YEE+RELVSCSNCTDYQSR ME+RSG KKMGQ EKK+VHMLN+TLCATTRT+SCILEN+QTP GV VP  LVP+MGG  F+ +VKELP    EAKG TKGG    ++AK  P     APP            A G     S       LP    A  G  AD IA +ITA G +IRDLKK+K DKA LKPHID LL LKT++KE TG +Y   PA    XXXXXXXXXXXXXXXXXXXXXXXX        I AKI + GD IR+LKK+K DKA +QP+IDAL+ LK QYK+ TG  Y APGA
Sbjct:    1 MPLDINMFRRE----PDLIRESQRRRFQPVEIVDEVIDLDTKWRESRSRIDFLNKDRNRYQKEVTKAKKAGGEDPENAAKIKEVAKEVKIVEAKMVELSQQVSKLLPKIGNIVADDVPVSNDEEKDNKVVSTFGPTPTGEKYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRNYSVLQPPYFMSKDVMAGVAQLEQFDEELYKVSGSGTEEKYLIATSEQPICAFHKGEWLGESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAAMQVEMSKASEEFYQSLGISYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRGMEVRSGHKKMGQVEKKFVHMLNSTLCATTRTMSCILENYQTPTGVTVPEVLVPFMGGITFLDYVKELPKGKREAKGATKGGY--ATSAKKPP-----APPXXXXXXXXXXXXANGGAAESS----ARGLPGLEEAKGGSEADAIADKITAKGLEIRDLKKSKPDKATLKPHIDTLLALKTEYKEKTGKDYAPPPAAAGAXXXXXXXXXXXXXXXXXXXXXXXXA-------ITAKIVAKGDEIRELKKSKPDKATIQPHIDALIALKTQYKDETGKAYVAPGA 633
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A4D9CLN9_9STRA (Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLN9_9STRA)

HSP 1 Score: 664 bits (1712), Expect = 2.200e-227
Identity = 385/785 (49.04%), Postives = 472/785 (60.13%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKGGMPVGSAAKSAPVAAAKA-PPAAGDRHSISPTPLLTPLPAAPAAATGPGADIAAQITAVGDKIRDLKKAKADKAELKPHIDQLLQLKTQFKEATGAEYGAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIAAKIASTGDAIRDLKKAKADKAQLQPYIDALLDLKRQYKEATGADYAAPGAXXXXXXXXXXXXXXXXATDGGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPCTAVSDA--------GAIDFGALNAYLLAHSYVGGWLPSARDDKAAEAIVNGALHAEAR-QHPNVARWLEHMETFTAVERAAWQ 2325
            MP+DI   R D+GGDP LVRESQRRRFA V LVDE++  D++WR      D   K RN VQ +V    K  +   +  A+I+   +++   +  + A ++E  +LLPKIGNIV   VP S DEE D EV    G   TG+   HHH++L+RIGG+EPERG  VAGHR YFLRDAGLLLN AL+ +G++FL  R YSVLQPPYFMN+DVM+GVAQLEQFDEELYKV G+  +EKYLIATSEQPLC FHKGEWLEE  LPLRYGG+STCFRKEAG+HGKD WGIFRVHQF+KVEQFV+CEGD E S  MQ EM+ AAE+FYQ+LG++YRVVNIVSGELNNAA+KK+DLE WFPGY+ YRELVSCSNCTDYQSRSMEIR G KK+GQ  KKYVHMLN+TLCA TRT+  ILENFQ  DG+RVP  LVP+MGG  F+PFV+E       AK   K         K    AA K   PA G   + + TP  T              D+A  I A G++IR LK  KADKA +KPH++ LL LK  +K ATG EY    A                                  A +   I + G+ IR LK  KA+K  L P+I  LL+LK +YK  TGAD+ AP A                +T    K                               A +   A+ D         G      LN YL   SY+ G++PS  D+  A A+++       + ++P+++RWL H+   ++ ER AWQ
Sbjct:    1 MPIDINLLRVDRGGDPALVRESQRRRFASVELVDEVLARDASWRKLVNDSDATRKARNAVQAEVSKKMKAKEECRDLVAKIQEFDKQVLEMDRAVKAAKEEVDKLLPKIGNIVDDSVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALVNYGVSFLRARKYSVLQPPYFMNRDVMAGVAQLEQFDEELYKVTGD--DEKYLIATSEQPLCGFHKGEWLEEKTLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEASQKMQEEMIMAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGTKKVGQEGKKYVHMLNSTLCACTRTICAILENFQVKDGIRVPEVLVPFMGGLTFLPFVREGRKDAATAKAADK---------KPKKTAAPKGMAPAVGKAQNGTGTPSET-------------EDLANAIAAKGEEIRQLKLKKADKATVKPHVETLLSLKRDYKAATGEEYAPPSAGQAQNPKPAVRAPNPPPLPSTGNAGEG-------AGVEEAITAKGEEIRALKARKAEKETLGPHIAELLNLKAKYKALTGADFVAPSAG---------------STSVHDKKVAASQPSQKVVSTSIPSTKKKTGTNKAEHVAGRNGGAIEDVQGPLLDAIGKPILANLNTYLQTRSYIRGFVPSQEDNVVAAAVISMEKDGVDKVRYPHLSRWLRHVGAVSSAERMAWQ 739
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A7S3MDB3_9STRA (Serine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDB3_9STRA)

HSP 1 Score: 573 bits (1477), Expect = 2.030e-193
Identity = 287/439 (65.38%), Postives = 336/439 (76.54%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKV-GGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKE 1314
            MP+DI  FR + GG+PEL+RESQRRRFA V +VDE+I  D  WR   G +D L K+RN VQK+V V  K  +      A IKAIGEEI A EAE  AL+ E  RL+  IGN+V   VP S DE+KDN V  + G         +HH++L+RIGGYEPERG Q+AGHR YFL+DAG+LLNQA I +G+AFL +R Y+VLQPPY M KD+M+GVAQLEQFDEELYKV GG   E+KYLIATSEQP+C +H  EWLEE +LP+RY GISTCFRKEAG HGKDTWGIFRVHQFEKVEQF I EGD E S+ MQ EM+  AEEFYQ+LG  Y V+NIVSG LNNAA++KYDLE WFPGY  YRELVSCSNCTDYQSR+MEIR G KK+G  EKKYVHMLNATLCAT R + C+LE +Q  DGVR+P  LVP+MGG  F+PFV++
Sbjct:    1 MPLDINLFRANAGGNPELIRESQRRRFASVEVVDEVIAKDEKWRILTGTIDDLRKKRNAVQKEVAVKMKAKEAADAQVAEIKAIGEEILAAEAEQKALKIEVDRLVGTIGNLVESGVPVSQDEDKDNLVVRKWGVPRDPAGMLNHHDLLWRIGGYEPERGAQIAGHRGYFLKDAGVLLNQAFINYGIAFLRKRNYNVLQPPYMMKKDMMAGVAQLEQFDEELYKVSGGSDGEDKYLIATSEQPICGYHANEWLEEKSLPIRYSGISTCFRKEAGKHGKDTWGIFRVHQFEKVEQFAIVEGDLETSNKMQEEMIATAEEFYQSLGFPYHVINIVSGALNNAAIRKYDLECWFPGYNAYRELVSCSNCTDYQSRAMEIRCGMKKLGDREKKYVHMLNATLCATGRAICCLLETYQEADGVRIPEVLVPFMGGITFLPFVRD 439
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A7S3Y3E5_HETAK (Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3E5_HETAK)

HSP 1 Score: 565 bits (1457), Expect = 1.930e-192
Identity = 282/439 (64.24%), Postives = 336/439 (76.54%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGK-PDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKE 1314
            M +DI   R D+GGDPE V+E QR+RFA V +VDE +  D+ WR     +D L KE+N VQK++G   K  + P  E   R  A+  EI  KEAE   LE    +LL +IGN+V  DVP S DE ++  V   HGP P+G QY++HH +L++IGGYEPERG +VAG+R YFLRDAG+ LNQALI +G+ F  +RGYS+L  PYFMNK++MSGVAQLEQFDEELYKV G G+++ YLIATSEQP+C FHK EWL+   LPLRY G STCFRKEAGS G+D WGIFRVHQFEK+EQF+ CE D E S AMQ EM+  AE FYQ+LG SYRV+N+VSGELNNAA+KKYDLEAWFPGY EYRELVSCSNCTDYQ+R+MEIR G KK G+ +KKYVHMLNATLCATTRT+ CILEN+QT  GVRVP  LVPYMGG  F+PF+ E
Sbjct:    1 MGIDINNLRVDRGGDPEKVKEWQRKRFAKVEIVDECVEKDNLWRTVVSTIDNLKKEKNAVQKEIGKHMKAKEQPPPELLERKAAVEAEILQKEAEKIDLEAVVQKLLNQIGNMVDDDVPVSQDEAENGTVRT-HGPTPSGPQYNNHHNLLHKIGGYEPERGSKVAGNRCYFLRDAGVRLNQALINYGMDFCRERGYSLLSTPYFMNKEIMSGVAQLEQFDEELYKVSGSGVQDSYLIATSEQPICGFHKDEWLQPGDLPLRYCGYSTCFRKEAGSSGRDVWGIFRVHQFEKIEQFIFCESDIEVSRAMQEEMIACAEAFYQSLGFSYRVINLVSGELNNAAIKKYDLEAWFPGYGEYRELVSCSNCTDYQARAMEIRCGTKKQGEKDKKYVHMLNATLCATTRTICCILENYQTETGVRVPEVLVPYMGGTTFLPFIWE 438
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A024TCC2_9STRA (Serine--tRNA ligase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TCC2_9STRA)

HSP 1 Score: 556 bits (1432), Expect = 2.330e-189
Identity = 287/442 (64.93%), Postives = 343/442 (77.60%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEA--RIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGP-KPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKV-GGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKE 1314
            MP+DI   R ++GG+PELVRESQR+RFADV+LVD +I +D AWR  +G L+ +    NR+Q  +    K  K D   E   + K + E   A + E DAL++   R L KIGNIV   VP S +E+ DN VT   G  +P  +   +HHEVL+RI GYEPE+GVQVAGHR YFL+  G++LNQALI +G  FL++R Y++LQPP+FMNKDVM+GVAQL +FDE LYKV G +  +EKYLIATSEQP+C FHKGEW+ E+ALP+RY G STCFRKEAGSHGKDTWGIFRVHQFEKVEQFV+CE   E+S AM  E+L  AE FYQ+LGL YRV+NIVSGELNNAA+KK+DLEAWFP Y E+RELVSCSNCTDYQSR+MEIR G KKM QTEKKYVH+LNATLCATTRT+SCILENFQTP+GVRVP  LVP+MGG  F+PFV E
Sbjct:    1 MPIDINLLRVERGGNPELVRESQRKRFADVDLVDRVIALDEAWRKKQGDLETVKMNMNRLQATIKDLYKAKKKDEAQELVEQRKKLEESEPALKLEADALKEVVDRELYKIGNIVDSSVPISQNED-DNVVTGTWGTCRPHDDSLHYHHEVLHRIDGYEPEKGVQVAGHRGYFLKGYGVMLNQALIMYGQQFLMKRKYTLLQPPFFMNKDVMAGVAQLSEFDEALYKVTGADANDEKYLIATSEQPMCGFHKGEWITESALPIRYAGTSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EQSPAMLDELLATAEAFYQSLGLPYRVINIVSGELNNAAIKKFDLEAWFPAYSEFRELVSCSNCTDYQSRAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVNE 439
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A485L5N7_9STRA (Serine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5N7_9STRA)

HSP 1 Score: 555 bits (1430), Expect = 5.790e-189
Identity = 288/452 (63.72%), Postives = 347/452 (76.77%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARI---KAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSH-HHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGM-EEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAK 1341
            MP+DI   R ++GG+P+LVRESQR+RFADV+LVD +I +D AWR  +G  + +    N +QKQ+    K  K D E +  I   K + E   A +AE DA+++   + L KIGN+V P VP S +E+ DNEV    G   T E   H HHEVL+RI GYEPE+GV+VAGHR YFL+  G++LNQALI +   FL+ R +++LQPP+FMNK+VM+GVAQL +FDE LYKV G+   +EKYLIATSEQP+C FHK EW+ E++LP+RY G STCFRKEAGSHGKDTWGIFRVHQFEKVEQFV+CE   EKS AM  EML  AE FYQ+LGL YRV+NIVSGELNNAA+KK+DLEAWFP Y E+RELVSCSNCTDYQSR+MEIR G KKM QTEKKYVH+LNATLCATTRT+SCILENFQTP+GVRVP  LVP+MGG  F+PFV+E P  L E K
Sbjct:    1 MPIDINMLRVERGGEPDLVRESQRKRFADVDLVDRVIALDEAWRKKQGDWETVKMNVNALQKQIQDLIKSKKKD-EAQPLIDERKRLAETEPALKAEADAIKETVDKELYKIGNLVDPTVPVSQNED-DNEVVATWGTCRTNEDSLHYHHEVLHRIDGYEPEKGVKVAGHRGYFLKGYGVMLNQALIMYSQQFLMARKHTLLQPPFFMNKEVMAGVAQLSEFDEALYKVTGQDANDEKYLIATSEQPMCGFHKDEWITESSLPIRYAGTSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EKSPAMLQEMLSTAEAFYQSLGLPYRVINIVSGELNNAAIKKFDLEAWFPAYAEFRELVSCSNCTDYQSRAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVQEAPVNLQEKK 448
[Close]
BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A7S2V1X7_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1X7_9STRA)

HSP 1 Score: 554 bits (1427), Expect = 2.180e-188
Identity = 285/446 (63.90%), Postives = 335/446 (75.11%), Query Frame = 1 
Query:   22 FRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYS-HHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKG 1356
             R D+GGDPE V+E QR+R+A V +VDE++  D AWR     +D LGK RN VQK+VG  +K  +P  +  A+IK   EEIK                    GN+V   VP S DEE++  V    GP P+ ++Y  HHHE L+RIGGYEPERGV VAGHRAYFLRDAG+LLNQALI +G+ FL  R YS+LQPP+FMNKD+M+ VAQLEQFDEELYKV G+  +EKYLIATSEQP+C FH+ EWL+E  LP RY G STCFRKEAGSHGKDTWGIFRVHQFEKVEQF   E D EKS AMQ EML+ A++FY++LGLSYRVVNIVSGELNNAA+KKYDLEAWFP Y+EYRELVSCSNCTDYQ+R+ME+R G KKMG  EK+Y HMLN+TL ATTRT+SCI+EN+QT DGVRVP  LVP+ GG  F PFV+EL       KG +KG
Sbjct:    2 LRVDRGGDPEKVKEFQRKRYAKVEVVDEVVEKDQAWRDLVKTVDELGKRRNAVQKEVGKKKKAKEPCDDLVAQIKGFDEEIKXXXXXXXXXXXXXXXXXXXXGNMVDESVPVSQDEEENITVCTV-GPTPSNDKYPLHHHEALWRIGGYEPERGVGVAGHRAYFLRDAGVLLNQALINYGMQFLRARQYSLLQPPFFMNKDLMAAVAQLEQFDEELYKVTGD--DEKYLIATSEQPMCGFHRNEWLQEAELPKRYCGYSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFCYVEDDLEKSQAMQEEMLQTAKDFYESLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYQEYRELVSCSNCTDYQARAMEVRCGTKKMGDKEKRYCHMLNSTLVATTRTISCIVENYQTTDGVRVPEVLVPFTGGVTFFPFVQEL-------KGASKG 437
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A067D7G8_SAPPC (Serine--tRNA ligase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D7G8_SAPPC)

HSP 1 Score: 540 bits (1390), Expect = 5.080e-183
Identity = 277/443 (62.53%), Postives = 340/443 (76.75%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARI---KAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGP-KPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKV-GGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKE 1314
            MP+DI Q R ++GG+P++VRESQ++RFA V+LVD++I +D  WR   G+ + +    N +Q Q+    K  K D E +  I   K +     A +AE DA++    R L KIGN+V P VP S +E+ DNEV    G  +P  +   +HHEVL+RI GYEPE+GV VAGHRAYFL+  G++LNQALI +G AFL++R Y++LQPPYFMNK+VM+GVAQL +FDE LYKV G +  +EKYLIATSEQP+C FHK EW+ E++LP+RY G STCFRKEAGSHGKDTWGIFRVHQFEKVEQFV+CE   EKS+ M  EM+  AE FYQ+LGL YRV+NIVSGELNNAA KKYDLEAWFP Y E+RELVS SNCTDYQ+R+MEIR G KKM QTEKKYVH+LNATLCATTRT+ CILEN QTP+GVRVP  LVP+MGG  F+PFV++
Sbjct:    1 MPIDINQLRVERGGNPDIVRESQKKRFASVDLVDQVIALDEEWRKKNGEWETMKMNINALQAQIKDLVKAKKQD-EAQPLIQKRKDMAASEPAAKAEADAIKVVVDRELSKIGNLVDPSVPVSQNED-DNEVVATWGACRPHDDALHYHHEVLHRIDGYEPEKGVAVAGHRAYFLKGYGVMLNQALIMYGQAFLMKRKYTLLQPPYFMNKEVMAGVAQLSEFDEALYKVTGADPSDEKYLIATSEQPMCGFHKDEWITESSLPIRYAGSSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EKSEEMLQEMISTAEAFYQSLGLPYRVINIVSGELNNAATKKYDLEAWFPAYAEFRELVSASNCTDYQARAMEIRCGGKKMNQTEKKYVHLLNATLCATTRTICCILENNQTPEGVRVPDVLVPFMGGVTFLPFVQD 439
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BLAST of jgi.p|Trimin1|168192 vs. uniprot
Match: A0A6G0XJV5_9STRA (Serine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJV5_9STRA)

HSP 1 Score: 537 bits (1384), Expect = 4.080e-182
Identity = 274/442 (61.99%), Postives = 332/442 (75.11%), Query Frame = 1 
Query:    1 MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEK---ECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGG-EGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKE 1314
            MP+DI   R ++GG+P+LVRESQR+RFADV+LVD +I +D +WR  +G L+ +    N++Q Q+ V  K  K D E +  +                      E  R L KIGNIV P VP S +E+++  V      +   E   +HHEVL RI GYEPE+GVQVAGHR YFL+  G++LNQALI +G  FL++R Y++LQPP+FMNK+VM+GVAQL +FDE LYKV G +  +EKYLIATSEQP+C FHK EW+ E+ALP+RY G STCFRKEAGSHG+DTWGIFRVHQFEKVEQFV+CE   EKS  M  EML  AE FYQ+LGL YRV+NIVSGELNNAA+KK+DLEAWFP Y+E+RELVSCSNCTDYQ+R+MEIR G KKM QTEKKYVH+LNATLCATTRT+SCILENFQTP+GVRVP  LVP+MGG  F+PFV E
Sbjct:    1 MPIDINLLRVERGGNPDLVRESQRKRFADVDLVDRVIALDESWRKKQGDLETVKMNSNKLQAQIKVLYKEKKKD-EAQGLVDXXXXXXXXXXXXXXXXXXXXXEVERELYKIGNIVDPTVPVSQNEDENEVVATWGACRQHDESLHYHHEVLQRIDGYEPEKGVQVAGHRGYFLKGYGVMLNQALIMYGQQFLMKRNYTLLQPPFFMNKEVMAGVAQLSEFDEALYKVTGVDANDEKYLIATSEQPMCGFHKDEWITESALPIRYAGTSTCFRKEAGSHGRDTWGIFRVHQFEKVEQFVLCEP--EKSPEMLQEMLSTAEAFYQSLGLPYRVINIVSGELNNAAIKKFDLEAWFPAYQEFRELVSCSNCTDYQARAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTISCILENFQTPEGVRVPDVLVPFMGGVTFLPFVHE 439
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168192 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAY7_9STRA0.000e+0100.00Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
D7FT02_ECTSI2.240e-26866.87Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A4D9CLN9_9STRA2.200e-22749.04Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S3MDB3_9STRA2.030e-19365.38Serine--tRNA ligase n=1 Tax=Spumella elongata TaxI... [more]
A0A7S3Y3E5_HETAK1.930e-19264.24Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma... [more]
A0A024TCC2_9STRA2.330e-18964.93Serine--tRNA ligase n=3 Tax=Aphanomyces TaxID=1008... [more]
A0A485L5N7_9STRA5.790e-18963.72Serine--tRNA ligase n=1 Tax=Aphanomyces stellatus ... [more]
A0A7S2V1X7_9STRA2.180e-18863.90Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa ... [more]
A0A067D7G8_SAPPC5.080e-18362.53Serine--tRNA ligase n=4 Tax=Saprolegniaceae TaxID=... [more]
A0A6G0XJV5_9STRA4.080e-18261.99Serine--tRNA ligase n=1 Tax=Aphanomyces euteiches ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_55contigContig_55:318268..327441 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|168192|e_gw1.55.132.1
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016
KEGG rclassRC00055,RC00523
KEGG ReactionR03661,R03662,R05578,R08218
KEGG ModuleM00121,M00359,M00360
KEGG Pathwayko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120
KEGG koko:K01875,ko:K01885,ko:K14163
EC6.1.1.11,6.1.1.15,6.1.1.17
GOsGO:0000122,GO:0000166,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001525,GO:0001568,GO:0001569,GO:0001763,GO:0001817,GO:0001818,GO:0001944,GO:0002009,GO:0002181,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0004812,GO:0004818,GO:0004819,GO:0004827,GO:0004828,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006424,GO:0006425,GO:0006433,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009069,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010574,GO:0010605,GO:0010608,GO:0010629,GO:0010876,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0016020,GO:0016043,GO:0016070,GO:0016259,GO:0016525,GO:0016874,GO:0016875,GO:0017076,GO:0017101,GO:0017102,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0022603,GO:0022607,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0035239,GO:0035295,GO:0035613,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042221,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043434,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044539,GO:0045087,GO:0045765,GO:0045892,GO:0045934,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0046942,GO:0046983,GO:0048514,GO:0048519,GO:0048523,GO:0048646,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051093,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0060429,GO:0060562,GO:0061138,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072358,GO:0072359,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097452,GO:0098619,GO:0140098,GO:0140101,GO:1901265,GO:1901342,GO:1901343,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902679,GO:1903506,GO:1903507,GO:1903670,GO:1903671,GO:1904046,GO:1990837,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000181,GO:2001141
Preferred nameEPRS
Descriptionseryl-tRNA aminoacylation
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0008@1|root,COG0172@1|root,KOG1147@2759|Eukaryota,KOG2509@2759|Eukaryota
Evalue3.68e-269
Seed ortholog2880.D7FT02
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSeryl-tRNA synthetase
Ec32 orthologEc-24_004300.1
TranscriptId168514
TrackFilteredModels1
ProteinId168192
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168192gene_7265Tribonema minus UTEX_B_3156 geneContig_55 318268..327441 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168192Trimin1|168192|e_gw1.55.132.1Tribonema minus UTEX_B_3156 polypeptideContig_55 318268..327441 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7265_1exon_7265_1Tribonema minus UTEX_B_3156 exonContig_55 318268..318372 +
exon_7265_2exon_7265_2Tribonema minus UTEX_B_3156 exonContig_55 319298..319468 +
exon_7265_3exon_7265_3Tribonema minus UTEX_B_3156 exonContig_55 320984..321159 +
exon_7265_4exon_7265_4Tribonema minus UTEX_B_3156 exonContig_55 321515..321680 +
exon_7265_5exon_7265_5Tribonema minus UTEX_B_3156 exonContig_55 322347..322507 +
exon_7265_6exon_7265_6Tribonema minus UTEX_B_3156 exonContig_55 324113..324263 +
exon_7265_7exon_7265_7Tribonema minus UTEX_B_3156 exonContig_55 325382..325581 +
exon_7265_8exon_7265_8Tribonema minus UTEX_B_3156 exonContig_55 325872..326168 +
exon_7265_9exon_7265_9Tribonema minus UTEX_B_3156 exonContig_55 326541..327441 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7265CDS_7265Tribonema minus UTEX_B_3156 CDSContig_55 318268..318372 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7265 ID=mRNA_7265|Name=jgi.p|Trimin1|168192|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2328bp|location=Sequence derived from alignment at Contig_55:318268..327441+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGTGGACATCCGGCAATTTCGTACGGATCAGGGAGGAGACCCGGA
GCTGGTCAGGGAGTCCCAGAGGCGGCGCTTTGCGGACGTGAACCTTGTGG
ATGAGATCATCAGGGTGGACTCCGCGTGGCGCGCCGGCCGCGGCAAGCTG
GACCTGCTGGGCAAGGAGCGCAACAGAGTGCAGAAGCAGGTGGGAGTGAG
CAGGAAGGGGGGCAAGCCGGACGTGGAGGGGGAGGCGCGCATCAAGGCCA
TTGGAGAGGAGATCAAGGCCAAAGAGGCGGAGCTCGACGCTCTAGAGAAG
GAATGCGCCCGGCTTTTGCCCAAAATCGGCAACATTGTCGCGCCGGATGT
GCCCACTTCCAACGACGAGGAGAAGGACAACGAGGTGACAGTTGAGCATG
GCCCCAAGCCGACTGGCGAGCAGTACTCGCATCACCACGAGGTGCTGTAC
CGCATCGGCGGTTACGAGCCGGAAAGGGGCGTGCAGGTGGCGGGGCACCG
CGCATACTTCCTAAGGGATGCTGGCCTGCTGCTCAACCAGGCGCTCATAC
AGTTTGGACTCGCGTTTCTGGTGCAGCGCGGCTACTCCGTGCTGCAGCCC
CCCTACTTCATGAACAAGGACGTCATGAGCGGCGTCGCCCAGCTCGAGCA
GTTTGACGAGGAGCTGTACAAGGTGGGGGGCGAGGGGATGGAGGAGAAGT
ACCTCATTGCCACCTCGGAGCAGCCGCTGTGCGCCTTCCACAAGGGCGAG
TGGCTCGAGGAGACTGCACTGCCTCTGAGGTATGGTGGTATCTCTACGTG
CTTCCGCAAGGAGGCTGGCTCGCACGGCAAGGACACGTGGGGAATCTTCC
GCGTGCACCAGTTTGAGAAGGTGGAGCAGTTTGTTATCTGTGAGGGGGAC
TTTGAGAAGTCCGACGCAATGCAACACGAGATGCTCAAGGCAGCCGAGGA
GTTCTACCAGGCTCTCGGCCTGTCCTACCGCGTCGTAAACATCGTGTCGG
GCGAGCTGAACAACGCCGCCGTCAAGAAGTACGACCTCGAGGCGTGGTTC
CCCGGCTACGAGGAGTACCGCGAGCTGGTCTCATGCTCCAACTGCACCGA
CTACCAGTCGCGCTCGATGGAGATCCGCAGTGGCCAGAAGAAGATGGGCC
AGACGGAGAAGAAGTACGTGCACATGCTCAACGCGACGCTGTGCGCGACG
ACGCGCACCCTCTCCTGCATCCTCGAGAACTTCCAGACGCCCGACGGCGT
GCGCGTCCCCCCCGCGCTCGTCCCCTACATGGGCGGCAAGGACTTCATCC
CTTTTGTCAAGGAGCTGCCCGCGGCGCTCGTGGAGGCTAAGGGGGTGACC
AAGGGGGGCATGCCAGTGGGCTCCGCGGCCAAGTCGGCGCCCGTTGCTGC
CGCCAAGGCGCCGCCCGCTGCGGGTGACCGCCACTCAATCAGTCCGACAC
CGCTCCTTACGCCGCTGCCCGCAGCCCCCGCCGCCGCGACGGGGCCCGGC
GCGGACATCGCTGCGCAGATCACCGCCGTAGGCGACAAGATCAGGGACCT
CAAGAAGGCCAAGGCCGACAAGGCTGAGCTCAAGCCCCACATCGATCAGC
TACTGCAGCTCAAGACCCAGTTCAAGGAGGCGACGGGAGCGGAATACGGC
GCAAAGCCTGCTGCCGCCGCCGCCGCTCCGGCGCCAACAGCGGCGCCCGC
TGCGCCGGCGGCAGCAGCAGCAGCTGCGCCGGCAGCAGCGGCGGCGCCTG
CCACCGGCCCTGGCGCCGAGATTGCGGCCAAGATCGCTTCGACCGGCGAC
GCGATCAGGGACTTGAAGAAGGCAAAGGCGGACAAGGCGCAGTTGCAGCC
CTACATCGACGCGCTGCTGGACCTCAAGAGGCAGTACAAGGAGGCGACAG
GAGCGGATTACGCCGCTCCCGGCGCCGCCGCCGCTAAACCCGCCGCCGCC
GCCGACAAAAAGGCCGCCGCCGCCGCCACAGACGGCGGCAAGAAGGGGGG
TGACAAAAAGGCGAATGGCAAGAAAGCGGAAGGCAAGCCGCCGGCGGCGG
CGGCAGCGGCGGCGCCGGCAGCAGCTGCGGCGCCGGCGGCGCCCAAGCCG
TGCACGGCCGTCTCCGACGCCGGCGCCATTGACTTCGGTGCGCTCAACGC
GTACCTGCTCGCGCACTCGTACGTGGGCGGGTGGCTGCCGAGCGCGCGCG
ACGACAAGGCGGCGGAGGCCATTGTGAACGGCGCGCTGCACGCGGAGGCG
CGCCAGCACCCCAACGTCGCGCGGTGGCTCGAGCACATGGAGACGTTCAC
GGCGGTGGAGCGCGCGGCGTGGCAATGA
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protein sequence of jgi.p|Trimin1|168192

>Trimin1|168192|e_gw1.55.132.1 ID=Trimin1|168192|e_gw1.55.132.1|Name=jgi.p|Trimin1|168192|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=776bp
MPVDIRQFRTDQGGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKL
DLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEK
ECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLY
RIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQP
PYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGE
WLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGD
FEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWF
PGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCAT
TRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVT
KGGMPVGSAAKSAPVAAAKAPPAAGDRHSISPTPLLTPLPAAPAAATGPG
ADIAAQITAVGDKIRDLKKAKADKAELKPHIDQLLQLKTQFKEATGAEYG
AKPAAAAAAPAPTAAPAAPAAAAAAAPAAAAAPATGPGAEIAAKIASTGD
AIRDLKKAKADKAQLQPYIDALLDLKRQYKEATGADYAAPGAAAAKPAAA
ADKKAAAAATDGGKKGGDKKANGKKAEGKPPAAAAAAAPAAAAAPAAPKP
CTAVSDAGAIDFGALNAYLLAHSYVGGWLPSARDDKAAEAIVNGALHAEA
RQHPNVARWLEHMETFTAVERAAWQ*
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mRNA from alignment at Contig_55:318268..327441+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7265 ID=mRNA_7265|Name=jgi.p|Trimin1|168192|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9174bp|location=Sequence derived from alignment at Contig_55:318268..327441+ (Tribonema minus UTEX_B_3156 )
ATGCCCGTGGACATCCGGCAATTTCGTACGGATCAGGGAGGAGACCCGGA
GCTGGTCAGGGAGTCCCAGAGGCGGCGCTTTGCGGACGTGAACCTTGTGG
ATGAGGTATGATGACCTTGAGGCTGCAGGATTTTCTCGTGCTGCCTGAGC
GGCGTGGTAGCCATGCGCAGCTTGAACGGCAAAGCAGGATGTGTTGACGC
TGGCTGCACACGCCAATGTTGCGAGGCTGCGACGTGCAGCGCAGCGCTTG
GTCCGAGACACTTGTCGAGTATCTTCCGGCGACATACCCGCTGACCGGCA
TCCCGTGGGCGACCACTGGCTAATGCACAGGCTCGCATTTGAAAAGACAC
ATAGTGAATTCATGTTGAGCTACTCTGCTGTGGCTGCTATTGGCGCTGAT
CTTCACCGCGCCAGAAGTCCCGCAAGTGATCCTTGCGGTGATCACAGGGC
TGCCAGGCAGCACTAGCTTCTCTTCACGTGAACTTTGGAATCCCAATGCA
AAACTTTCGAGCTATATTTCTATGGCCAATCCCAATTTCACAATAGTTTC
AAGCTCAAGTTCACAAAGCATGACCCGTAGATCACCCCAGAGACAAAGCA
TCATGTCTGAACACATTGCTCGAAGGCATGTTTCTGGGTCGCTGTCATTG
TTGAAAGATTGGCGAGGCTAACGGCAGTATGCACACATTGCTGTACTGTT
CTGTACTGTCAGGGGCAACAATTTGTGAATCACTGCGGCAACAGCTGCAT
GTGTGCCTTGATTCTCACCATGTCTTGTTGGCACCTAACTGTGCTGCTCA
TACGGTGAGATTGAGCTTGTCTGCGAGCGCAGCTGCGGCCATGCCGCCAT
GCCTACAAGCCGTTGATGATTGCAGTGATTTGCTGCATCATGCCCGCAAC
TGCTTGTGAAACTCACGCCCAAAGGCAAAGGCCATCACAGACAAACTCAC
CTACTGAGCATCCCTGCAGCGCAGCACAGCACAGCATACCAAAAGTACCC
CTTTGCGCCTGTTGCAACGATCACTCACAGATCATCAGGGTGGACTCCGC
GTGGCGCGCCGGCCGCGGCAAGCTGGACCTGCTGGGCAAGGAGCGCAACA
GAGTGCAGAAGCAGGTGGGAGTGAGCAGGAAGGGGGGCAAGCCGGACGTG
GAGGGGGAGGCGCGCATCAAGGCCATTGGAGAGGAGATCAAGGCCAAAGA
GGTAAGTGAAATATATGGAAAACCTTGGTGAACAACGCAAAGTCTCTACT
GCCATGAAGCACTTGCATCAAGGCCATACGAGAGGAGATCAAGGCCAAAG
AGGTACGATAACTGTGTTAAATATTTGTGAACCAGCCCGGGTGAACACCG
CGCTATCATAGATACCTGCCATGCATCAAGGCCATTGGAGAGGAGATCAA
GGCCAAAGAGGCGCGTAAATTTTGGCAGATACTCTTGAAAAACCTGGGTG
AAAATTGCAAAACTGAGAACGCTGGTTTACTCTATCGTATGTTTACTGCC
ACGAAGTACTTGCACCAGGGCCATTGGAGAGGAGATCAAGGCCAAAGAGG
CACGCAAACTGTAGGATGAAGTTGTGAAATTCCTGGGTGAACATCCCAGA
ACTGAGAACACTGGTCTACTCAATCGTATGTCTACTGCCATGAAGTACTT
GCACCAGGGCCATCAGATTGGAGATCAAGGCCAAAGAGGCGAGTGAATTG
TAGCAAAAGTTGTGGAAAAGCCTGGGTGAACATTGCCAAAGTTCTCTTTG
CTATCATATGCCTACTTCTATAACCTTGTGCATGACGCCTTCAAGTGGGA
GGCAAGGCCCCATCATGGCAAGTGCAGACAAGATAGGGTCAAGCGACGTT
TATGCAGCACCTTGAAGTTGCAGTTTCAGCTCGGCGCGCTGTCGCCACCA
TAGGGCGCCTGTTCGTGCCGATTGTCGTGCACAATCGGGGTGCAGCGGGT
TGATGAGGCAGTTGTTATCAGACTCTGCATGTCAATCTGGCGTGTGCACA
TTACCATGACTGTGAGCGGCTGCAGGCGGCTGCAGCATGCAGCTGCAGAG
ACAATGGAAAGCATCTAGGCTAGGCGCCAATGACCACAATGTTAGACGCG
ATGCATGGCGCTCCAGGAGTGCTGGGGGTGTCAGAATGAGGAAAAAAAAG
CTGCAACCGGTCTTGCAGCTTGTGCAGTGTGCCTCACTGAGTAACATTTG
CGCGTGCGCTTCAGCTTGCTCTACACAGTTGCGCGCATCTACTGCAGACC
AGCACAGACAGTGCTCAGAGGCAAAGTGCCCGTGGCTGCCAAGAAGTTGA
AGTTGAGCATTTGTGGATCTAGACATTTGTTGATTACACAGCGCACAATG
ACGCATAGAGCGCAGTGAGCCAAACCTCTGCTGATCGTTACTGTTTTAAG
CCTTCGTTGTGTGAGCAGTATCTCAGTCTTTGCAGTATTACGTGCTGTAG
ACAATTCATACGTGTCATTGTCGTCGTGGTCGAGTCTCATCATTCTCGAA
AGCAGCTTTGCTGCTAGTACAGGTGAAAGTTATTTGCGCTTGTCTGCAGT
GCGCACAGTTGCAACTTCAACTTTGACACCCATCATAGTGATCCACCTCA
TCGGCTGATGGCAACAGAACATGCGCCTTTGTCTGCCAGCTTTCAACTTT
TGTCGCAAAAATGACTTTCCACAGGGGTAGCTCACTGTTGAAGTTATCTT
GGATTTTGTGTTGCAGGCGGAGCTCGACGCTCTAGAGAAGGAATGCGCCC
GGCTTTTGCCCAAAATCGGCAACATTGTCGCGCCGGATGTGCCCACTTCC
AACGACGAGGAGAAGGACAACGAGGTGACAGTTGAGCATGGCCCCAAGCC
GACTGGCGAGCAGTACTCGCATCACCACGAGGTGCTGTACCGGTGAGTTC
TGCCCCTGGTGTGAGGTCTGCACTGTACAGTACATAGTGTGCTTTTAAAA
GTTGAAGTCTGTGCATGCCAGAAGTTGAAGCTGCAGCGGGCGAGGCTGCT
GCTGCGTGTTGAGATTCATCTTCCGGTCAGCCATACCCCTGCCCGTGATC
TGTGACTGTCATGACTTCATGTGCGGTGCCGGCATTCTGAGGTCAGAGGT
GCTGTTCTCACCACTTGCGGTCCACTGAGCACACGTCAGTAACGCCATGC
CACTTGCCAGCAGCTACACCATAGTAAACTGTTTACGTCGAAGTATGCAA
GTCCTTTGTCACTTCTTGCTGATCACTGTCGCATTGTCGGCCCGCAGCAT
CGGCGGTTACGAGCCGGAAAGGGGCGTGCAGGTGGCGGGGCACCGCGCAT
ACTTCCTAAGGGATGCTGGCCTGCTGCTCAACCAGGCGCTCATACAGTTT
GGACTCGCGTTTCTGGTGCAGCGCGGCTACTCCGTGCTGCAGCCCCCCTA
CTTCATGAACAAGGTGAGCGTACGCGCAGCTTTTCTTGTGGTTGCATTCC
CGCTGCGTGTGTGGTGCTGCAGTCCCCCTGCTTCATGAACAAGGTGAGCG
TCCGCACCACCGACTTGTCGTTGCAGTGCCGTCGCGTGTGTGTGGTGCAC
GGGTGCGCCGCCTGTACAGACGCAGTACAGGGGCAGTACAGCTGTACCGC
TGCAACAGTCGCAACGGCCGCATGGCACTGTGTCACGCCTTGGAGTCATT
CATACTGTGTCATGAAGTCTGAATCACTGTCTGATGGAAACAGTGTCGTT
GCGTGCTATACGCTGCGCCGTTGATGGCAGCTGTGCATCCACGTGGCAAG
CTGCAGTGATTGTATCGGGAGCGTCCCTGATGTCTTCAGTTGCACTTTGA
GTGCGTGCATCAAAGCGCATATCTGTAGCTGTTGCGTTGGCCAAATATTG
TCATGTATGGTCGAGCATGAGGAAACGCCCAGCCCTATCAAATGCTGCTG
CATGCCTCCGTGGCACAGCTCAGCAGCTTGCCAACATGCAGTATTTGTGT
TTTGAAGTATACCACAGCCTGGCTTGATTGCATGGGTACATAACACCACG
TGGACATGCCCACAATTGCATCAAGCAACTCATACAAGCATCATCAATAG
GATACCTACCTACGTACTTGCCGTTGCAGGACGTCATGAGCGGCGTCGCC
CAGCTCGAGCAGTTTGACGAGGAGCTGTACAAGGTGGGGGGCGAGGGGAT
GGAGGAGAAGTACCTCATTGCCACCTCGGAGCAGCCGCTGTGCGCCTTCC
ACAAGGGCGAGTGGCTCGAGGAGACTGCACTGCCTCTGAGGTACGCAGAT
GTTGAAGTATGTCTCCTTCTTGAAGAGTTGTCTGTTCATGTGTTTTGTTT
CTTGAAGTTCGTCAATGGTGGTGGTGGGAATGGCGCGGAGCGGCCGCTAT
GCGCCTTTCACAAGGGCGAGTGGCTCGAGGAGACGGCACTGCCCCTGAGG
TACGCAGATGTTGAAATGTGTGTTGTTGAAGTACTCGTAAACTGGTTTTG
TTCTTGAAGTTTGTTTGTTTTGATCGTGGAAATTCGGGTACAGTGGGATC
GAGGGCACACGGTAGGCAGTACTGCAGGGAGCATTCGCTGGTGATGGCGA
CAACCATGCGTGGCGTCATAAACACACTCACACACACACACACACTCGCG
CTCACAAACATACACACACCAGCCCAAGGCGCAATCGACCCTTCCTGCGC
TGCCCGGCATGGTGCTTTCAACGCTCTGTCATCTGCAGCTGAGAAGCCAT
GGCATACCATTATAGCATTCCATATTGTCGACAAGCTTTCAAAGACTCTA
TGCATTGGGGCTGCGCAGTTGTGTGACTGCTAAGAACAAGCACTTCTGCC
ATGGACACTTGTGCCTGCTCGTTGACACAGACTGTACAGCCAGATGCGCT
GGTGTCTCCAGTTGCCTCTGCAAGGGTCCCGTGGAGTGTGCAAGGGCTTC
TGCTTCTGAATGACGGATTCTGCTGCTGTGCGTCAAAGTTTGCCAAATAG
ACCAGCACCGATCTTCATGCTGGCTGTTTGCAGTTCGACCATAGATGTAT
GGAAACGTTGTGATTACACCTCTGCAGGTGTCAGCAATGGCATATTCGCT
TCGTTTTCACCACAAGCGGCTGCACCTACACATTCCAGTGAAGTGTACCT
GTTGTGTGATGATTCAGCACCTGCGGCTGCACCTATACCAGTACGTATAC
CCGTCGTGTGATGGATCAGCGCCACTGACTTGTGGTGCACATGTTTGGTC
GTGTCATATGCTTCTTGTTGAAGTTGAACGAGTGAAATCACTTCTGATGA
ACAGCTAGCGCCAGCCTGATTTATTCCGCGCCATGTGTGCATGCACGGCG
AGGTCTCTTCGACAACAACCACATCATTCAGATGAACAAACAATGTGTCT
GCTTACAGAGACCAGACAACGCAATGTTGTTGGTGGCAGACCACATCTCC
TCTCACTCATCGTCATCGTCATCTTTCGCACTACATGTACTGTATGTAGG
TATGGCAGCATCTCCTCTCACTCATCGTCATCGTCATCTTTCGCACTACA
TGTACTGTATGTAGGTATGGCAGCACTCCCGCGACAACTACAACCAAGTA
CCTCAGTCACTACTTCAACAAACAACATGCATGAGTCAGTCTGTCTCGCG
GAGGGACTGCACAAAACATTTGTCGGGTGAATCACCGTATCCCCAATGCC
TCATCGCCGTTCTGCACTCTGCGGAATGTGTACAGGTATGGCGGCATCTC
CACTGTGACAACAATCACATCAAATAGGAGCACAAACAATGTGCAAGTCA
GTCTGCTCTGAGACCAGACAACACAACGCTTTTGGTGGCAGACCACATCT
CCTCCCACTCATCGTCATCTTCTGCACTACTTGTTCTGTATGTAGGTATG
GTGGTATCTCTACGTGCTTCCGCAAGGAGGCTGGCTCGCACGGCAAGGAC
ACGTGGGGAATCTTCCGCGTGCACCAGTTTGAGAAGGTGGAGCAGTTTGT
TATCTGTGAGGGGGACTTTGAGAAGTCCGACGCAATGCAACACGAGGTCA
GTGGTTAATGTGACGACGCATGCATCCAGTAGACCCAGGGCTAGCGTCTA
AAGTAAACTCTTGCGCCAAACACGTTGCGCCAGTGTGTTGCGCCAGTTGC
GCCAGCAGCCCCGGCAAGTGACTCGTGGCGCAACTGGCGATACTCGCACA
TTTACTCATGAGTATTACCTGTTACTCGCAAGTTTACTCGCGAGTCTTAC
CTAGGGTTAGCGCCATTAACTAGGGTTAGTCATGACCTTAACCCTAACCC
AAACCCTTATGTAAGCTCTATGGGCCTTAATAGTGACTGTAGAAGCACCA
GAAGCCTTAATAAGAGTTGCGCCAGTTGCGCCATGGCTAAACTAGTTTAG
CCAGGGCTCGAAACCCAAAGTCAGTTGCGCCAAGGCTGTCTGAATTTAGA
CGCTAGCCCTGAGTAGACCTACGTAAATGGTCAAAACAGATAAAATCAGA
CAAAAGCTACCAGCTGCAAGTGCACAATTGGCGTTTTGGTGTACCTCTGC
TTCGTCGAACAGTGCCCACATGTGTAGATGCGAAAACGCTGTTGTTTCGG
ACACCACAAGTCACTACATAGTGCCGCACACACGCATGCAGCAAAACAAC
TCAAGCTCCTTCACCTCGAACTCTCTCTGAGAATGCGCTCAGCAGCTGAG
CATCACCGAAAAATTACAGTACGGCTCCGGCCATTACGCTGTGTAACTCT
TGCCAGCTAATGACGGCAGTTGTGAGGCCATCCAGTGTCTCTCATAAAGC
TCTTGGCAGAGCACTCCTGCCTGGCGATTTGATCGCTTCACAGTCTTGGT
GACTCATCGTGTTCAATGCCCTTTGGTGGCCACTGCCTGAGCTGTGCTGA
CGAGACATTGCCCTTCTCCACCTGTATGTTATGTTGCTGTGTGTTCCACA
ATACATTCACTTCTAGCAGAAGCCGACGCCAGTCGTGTGCTGCTAGAAGT
GAATATACTGTGGTCGGTGTGTACCGGCAAGTGTATCTGCCGCAACCGTC
AAGCATGCACACGGCAATGGGCATGTGCATGTAACTGCCATATGCTCCAT
CACTCTTCACACCGCTTCTCCGGCGCTGACGCGGCACTGCATCTCACCGT
CATTGCCCCTGCAGATGCTCAAGGCAGCCGAGGAGTTCTACCAGGCTCTC
GGCCTGTCCTACCGCGTCGTAAACATCGTGTCGGGCGAGCTGAACAACGC
CGCCGTCAAGAAGTACGACCTCGAGGCGTGGTTCCCCGGCTACGAGGAGT
ACCGCGAGCTGGTCTCATGCTCCAACTGCACCGACTACCAGTCGCGCTCG
ATGGAGATCCGCAGGTGCGCAAGAGTTGAAGTTGACAGTGACGTGCCATG
CCAGACCCATTTGCGCGACCACAGCAGTGTGACGCTCCAGTCGAGTGCGA
CAGCGCCGTCTGCCACCTGCGAGCAAATGAGACTGTGCAGGGCGAGCGCA
TGTTACAAGTTGAAGTTCAGAGATGTCTCAACAGTCAGGCTGGTTTGCGA
CAAGAAGATGGATAACACGCACGTCTGCAGCCGATCAGTTGCACCGCCTG
AAACCGCCAACAACCTGTCCCCGCGCCCCCCCCCCCCCCCCCCCCGCGCC
GCAGTGGCCAGAAGAAGATGGGCCAGACGGAGAAGAAGTACGTGCACATG
CTCAACGCGACGCTGTGCGCGACGACGCGCACCCTCTCCTGCATCCTCGA
GAACTTCCAGACGCCCGACGGCGTGCGCGTCCCCCCCGCGCTCGTCCCCT
ACATGGGCGGCAAGGACTTCATCCCTTTTGTCAAGGAGCTGCCCGCGGCG
CTCGTGGAGGCTAAGGGGGTGACCAAGGGGGGCATGCCAGTGGGCTCCGC
GGCCAAGTCGGCGCCCGTTGCTGCCGCCAAGGCGCCGCCCGCTGCGGGTG
AGTGCGCGTGGCGTGTGGCGTATGCCCTCGTCGGCTGCACTGCGCAAGGC
TGCAGCATCCAAGAGTGTTGACCCCCGTTGAGCATTTGTTGATACTCTTG
AGTGCGCGTGTCGCGTTGCTCGGGGGTTGGCGCGCTGGATGCTGCTGCCT
CGCGCAGTGTGCCTACCTACGTGTGCTGGAGCCTATGGTGGATTGTTGAG
ACCGTTGTGGCGAGGAGAAGGCATCTGCGCGCCGCGCTTCGTCGAAGGAT
GCACCTTTGTAGCACATGCTTGGAGGATGCATATTTGAGCGCACACACTC
TTGCTGCAGGCAATGCTCAAGATCTCATGCAGATGCTGGCGGCTTGCGCA
CATGTTGCGAGACAACGAAACAGCCGCCACTCAATCAGTCCGACACCGCT
CCTTACGCCGCTGCCCGCAGCCCCCGCCGCCGCGACGGGGCCCGGCGCGG
ACATCGCTGCGCAGATCACCGCCGTAGGCGACAAGATCAGGGACCTCAAG
AAGGCCAAGGCCGACAAGGCTGAGCTCAAGCCCCACATCGATCAGCTACT
GCAGCTCAAGACCCAGTTCAAGGAGGCGACGGGAGCGGAATACGGCGCAA
AGCCTGCTGCCGCCGCCGCCGCTCCGGCGCCAACAGCGGCGCCCGCTGCG
CCGGCGGCAGCAGCAGCAGCTGCGCCGGCAGCAGCGGCGGCGCCTGCCAC
CGGCCCTGGCGCCGAGATTGCGGCCAAGATCGCTTCGACCGGCGACGCGA
TCAGGGACTTGAAGAAGGCAAAGGCGGACAAGGCGCAGTTGCAGCCCTAC
ATCGACGCGCTGCTGGACCTCAAGAGGCAGTACAAGGAGGCGACAGGAGC
GGATTACGCCGCTCCCGGCGCCGCCGCCGCTAAACCCGCCGCCGCCGCCG
ACAAAAAGGCCGCCGCCGCCGCCACAGACGGCGGCAAGAAGGGGGGTGAC
AAAAAGGCGAATGGCAAGAAAGCGGAAGGCAAGCCGCCGGCGGCGGCGGC
AGCGGCGGCGCCGGCAGCAGCTGCGGCGCCGGCGGCGCCCAAGCCGTGCA
CGGCCGTCTCCGACGCCGGCGCCATTGACTTCGGTGCGCTCAACGCGTAC
CTGCTCGCGCACTCGTACGTGGGCGGGTGGCTGCCGAGCGCGCGCGACGA
CAAGGCGGCGGAGGCCATTGTGAACGGCGCGCTGCACGCGGAGGCGCGCC
AGCACCCCAACGTCGCGCGGTGGCTCGAGCACATGGAGACGTTCACGGCG
GTGGAGCGCGCGGCGTGGCAATGA
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Coding sequence (CDS) from alignment at Contig_55:318268..327441+

>mRNA_7265 ID=mRNA_7265|Name=jgi.p|Trimin1|168192|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2328bp|location=Sequence derived from alignment at Contig_55:318268..327441+ (Tribonema minus UTEX_B_3156 )
ATGCCCGTGGACATCCGGCAATTTCGTACGGATCAGGGAGGAGACCCGGA
GCTGGTCAGGGAGTCCCAGAGGCGGCGCTTTGCGGACGTGAACCTTGTGG
ATGAGATCATCAGGGTGGACTCCGCGTGGCGCGCCGGCCGCGGCAAGCTG
GACCTGCTGGGCAAGGAGCGCAACAGAGTGCAGAAGCAGGTGGGAGTGAG
CAGGAAGGGGGGCAAGCCGGACGTGGAGGGGGAGGCGCGCATCAAGGCCA
TTGGAGAGGAGATCAAGGCCAAAGAGGCGGAGCTCGACGCTCTAGAGAAG
GAATGCGCCCGGCTTTTGCCCAAAATCGGCAACATTGTCGCGCCGGATGT
GCCCACTTCCAACGACGAGGAGAAGGACAACGAGGTGACAGTTGAGCATG
GCCCCAAGCCGACTGGCGAGCAGTACTCGCATCACCACGAGGTGCTGTAC
CGCATCGGCGGTTACGAGCCGGAAAGGGGCGTGCAGGTGGCGGGGCACCG
CGCATACTTCCTAAGGGATGCTGGCCTGCTGCTCAACCAGGCGCTCATAC
AGTTTGGACTCGCGTTTCTGGTGCAGCGCGGCTACTCCGTGCTGCAGCCC
CCCTACTTCATGAACAAGGACGTCATGAGCGGCGTCGCCCAGCTCGAGCA
GTTTGACGAGGAGCTGTACAAGGTGGGGGGCGAGGGGATGGAGGAGAAGT
ACCTCATTGCCACCTCGGAGCAGCCGCTGTGCGCCTTCCACAAGGGCGAG
TGGCTCGAGGAGACTGCACTGCCTCTGAGGTATGGTGGTATCTCTACGTG
CTTCCGCAAGGAGGCTGGCTCGCACGGCAAGGACACGTGGGGAATCTTCC
GCGTGCACCAGTTTGAGAAGGTGGAGCAGTTTGTTATCTGTGAGGGGGAC
TTTGAGAAGTCCGACGCAATGCAACACGAGATGCTCAAGGCAGCCGAGGA
GTTCTACCAGGCTCTCGGCCTGTCCTACCGCGTCGTAAACATCGTGTCGG
GCGAGCTGAACAACGCCGCCGTCAAGAAGTACGACCTCGAGGCGTGGTTC
CCCGGCTACGAGGAGTACCGCGAGCTGGTCTCATGCTCCAACTGCACCGA
CTACCAGTCGCGCTCGATGGAGATCCGCAGTGGCCAGAAGAAGATGGGCC
AGACGGAGAAGAAGTACGTGCACATGCTCAACGCGACGCTGTGCGCGACG
ACGCGCACCCTCTCCTGCATCCTCGAGAACTTCCAGACGCCCGACGGCGT
GCGCGTCCCCCCCGCGCTCGTCCCCTACATGGGCGGCAAGGACTTCATCC
CTTTTGTCAAGGAGCTGCCCGCGGCGCTCGTGGAGGCTAAGGGGGTGACC
AAGGGGGGCATGCCAGTGGGCTCCGCGGCCAAGTCGGCGCCCGTTGCTGC
CGCCAAGGCGCCGCCCGCTGCGGGTGACCGCCACTCAATCAGTCCGACAC
CGCTCCTTACGCCGCTGCCCGCAGCCCCCGCCGCCGCGACGGGGCCCGGC
GCGGACATCGCTGCGCAGATCACCGCCGTAGGCGACAAGATCAGGGACCT
CAAGAAGGCCAAGGCCGACAAGGCTGAGCTCAAGCCCCACATCGATCAGC
TACTGCAGCTCAAGACCCAGTTCAAGGAGGCGACGGGAGCGGAATACGGC
GCAAAGCCTGCTGCCGCCGCCGCCGCTCCGGCGCCAACAGCGGCGCCCGC
TGCGCCGGCGGCAGCAGCAGCAGCTGCGCCGGCAGCAGCGGCGGCGCCTG
CCACCGGCCCTGGCGCCGAGATTGCGGCCAAGATCGCTTCGACCGGCGAC
GCGATCAGGGACTTGAAGAAGGCAAAGGCGGACAAGGCGCAGTTGCAGCC
CTACATCGACGCGCTGCTGGACCTCAAGAGGCAGTACAAGGAGGCGACAG
GAGCGGATTACGCCGCTCCCGGCGCCGCCGCCGCTAAACCCGCCGCCGCC
GCCGACAAAAAGGCCGCCGCCGCCGCCACAGACGGCGGCAAGAAGGGGGG
TGACAAAAAGGCGAATGGCAAGAAAGCGGAAGGCAAGCCGCCGGCGGCGG
CGGCAGCGGCGGCGCCGGCAGCAGCTGCGGCGCCGGCGGCGCCCAAGCCG
TGCACGGCCGTCTCCGACGCCGGCGCCATTGACTTCGGTGCGCTCAACGC
GTACCTGCTCGCGCACTCGTACGTGGGCGGGTGGCTGCCGAGCGCGCGCG
ACGACAAGGCGGCGGAGGCCATTGTGAACGGCGCGCTGCACGCGGAGGCG
CGCCAGCACCCCAACGTCGCGCGGTGGCTCGAGCACATGGAGACGTTCAC
GGCGGTGGAGCGCGCGGCGTGGCAATGA
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