mRNA_7249 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|168111
Unique NamemRNA_7249
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: A0A836CBJ2_9STRA (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ2_9STRA)

HSP 1 Score: 638 bits (1646), Expect = 3.690e-230
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1 
Query:    1 MLRPAFRWVRRVQPGSAAGAFTSRHLNNSASTAAPDNDSAPKLPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAA 1008
            MLRPAFRWVRRVQPGSAAGAFTSRHLNNSASTAAPDNDSAPKLPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAA
Sbjct:    1 MLRPAFRWVRRVQPGSAAGAFTSRHLNNSASTAAPDNDSAPKLPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAA 336
[Close]
BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: UPI001872DDD5 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872DDD5)

HSP 1 Score: 351 bits (900), Expect = 1.720e-117
Identity = 187/283 (66.08%), Postives = 219/283 (77.39%), Query Frame = 1 
Query:  127 LPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGAL 975
            LP  V +VEVGPRDGLQNE   + A  K+  + RLA AG + IEA +FVSPKWVPQMAD A V+A + R PGVRY  LVPNLKGLE A++A V E+AVF +ASETF+QRNINC+IAES+ERFRP CA A +AGL +RGY+SC LGCP+EG VP A V  +A AL A+GCAEI + DT+G GTPL+A A + A AAA VPL RLA HFHDTYGQALANIL  L+ GV TVD A AGLGGCPYA GA+GNVA+EDVVYLL G G+ TG+DL+RL  A  +IC AL
Sbjct:    3 LPKSVELVEVGPRDGLQNEPQSLPATVKVELIERLAEAGCKVIEAGAFVSPKWVPQMADTAEVLAALKRRPGVRYPVLVPNLKGLERALAAGVEEIAVFGAASETFTQRNINCSIAESLERFRPVCAEATAAGLRLRGYVSCVLGCPYEGEVPLARVAELAAALDAMGCAEISLGDTIGVGTPLKARAMVEAVAAA-VPLERLAVHFHDTYGQALANILACLEAGVATVDTAVAGLGGCPYAKGASGNVASEDVVYLLNGLGIETGIDLDRLAAAGAFICRAL 284
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BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: A0A843RMC0_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RMC0_9PROT)

HSP 1 Score: 349 bits (895), Expect = 9.840e-117
Identity = 193/294 (65.65%), Postives = 221/294 (75.17%), Query Frame = 1 
Query:  127 LPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAA 1008
            LP  V IVEVGPRDGLQNE    +A  K+  + RLA AG R IEA +FVSPKWVPQMAD A V+A + R  GVRY  LVPNL+GLE A +A V EV+VF +ASETF+QRNINC+IAES+ERF P C AA +AGL VRGY+SC LGCP+EGAVP A V  VA AL A+GCAEI + DT+G GTPL+A A L A A A VPL RLA HFHDTYGQALANIL  L+ GV TVD A AGLGGCPYA GA+GNVATEDVVY+L G G+ +G+DL+RL  A  YIC  LG  R PA+  A
Sbjct:    3 LPKSVEIVEVGPRDGLQNEPQSPAAAVKVTLIERLAEAGCRVIEAGAFVSPKWVPQMADTAEVLAALHRKAGVRYPVLVPNLEGLERARAAGVEEVSVFGAASETFTQRNINCSIAESLERFAPVCEAALAAGLRVRGYVSCVLGCPYEGAVPVARVAEVAAALRAMGCAEISLGDTIGVGTPLKARAMLAAVAEA-VPLDRLAVHFHDTYGQALANILACLEFGVATVDTAVAGLGGCPYAKGASGNVATEDVVYMLNGLGIESGIDLDRLAAAGAYICAELG--RPPASKVA 293
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BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: A0A6A5L0Y2_LUPAL (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=14 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L0Y2_LUPAL)

HSP 1 Score: 347 bits (889), Expect = 7.470e-116
Identity = 180/284 (63.38%), Postives = 220/284 (77.46%), Query Frame = 1 
Query:  127 LPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALG 978
            LP  V +VEVGPRDGLQNE+T +    K+  VNRL+ AGL  +EA SFVSPKWVPQM D A V+AG+ R PGVRY AL PNLKGLEGA++AK  EVAVF +ASE+FSQ+NINC+IAES++RF P    A +AG+PVRGY+SC LGCP+EG + P AV  VAE L A+GC EI + DT+G GTP +A A + AA A  VP+ ++A HFHDTYGQALANIL ALQMGV  VD++ AGLGGCPYA GA+GNVA+EDV+Y+L G G+ TGVDL+RL+ A  +I  A+G
Sbjct:    3 LPKFVRMVEVGPRDGLQNEKTMVPTAVKVELVNRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMI-AAVAERVPVDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIG 285
[Close]
BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: A0A2U1VHB5_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VHB5_9PROT)

HSP 1 Score: 347 bits (889), Expect = 7.470e-116
Identity = 180/285 (63.16%), Postives = 220/285 (77.19%), Query Frame = 1 
Query:  124 KLPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALG 978
            +LP  V +VEVGPRDGLQNE+T +    K+  V+RL+AAGL  +EA SFVSPKWVPQM D A V+AG+ R PGVRY AL PNLKGLEGA++AK  EVAVF +ASE+FSQ+NINC+IAES++RF P    A + GLPVRGYISC LGCP+EG + P AV  VAE L A+GC EI + DT+G GTP +A A + A A   VP+ ++A HFHDTYGQALANIL ALQMGV  VD++ AGLGGCPYA GA+GNVA+EDV+Y+L G G+ TGVDL+RL+ A  +I  A+G
Sbjct:    2 QLPNVVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLGVVEAASFVSPKWVPQMGDSADVLAGITRKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERARAEGLPVRGYISCVLGCPYEGEIAPKAVAEVAERLFAMGCYEISLGDTIGTGTPAKAQAMITAVAER-VPMDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIG 285
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BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: UPI000404BBC8 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Chitinimonas koreensis TaxID=356302 RepID=UPI000404BBC8)

HSP 1 Score: 345 bits (885), Expect = 3.230e-115
Identity = 186/294 (63.27%), Postives = 225/294 (76.53%), Query Frame = 1 
Query:  127 LPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAA 1008
             P +V IVEVGPRDGLQNE+TP+  E K+ F+++LA AGL+ IEA +FVSPKWVPQMAD A VM G+ R  GVRY  LVPN+KG E A +A   E+AVFA+ASE FSQ+NINC+IAES+ERF P  AAA + G+ VRGY+SC LGCP++G VP A V RVA+AL  +GC E+ + DT+G GTP +A A + A A A VP+ RLAAHFHDT+GQALAN+   L+MGV TVD++AAGLGGCPYA GA+GNVATEDVVYLL G G+ TGVDLE+L  A  YI   LG  R PA+ AA
Sbjct:    3 FPTQVKIVEVGPRDGLQNEKTPVGTEVKLAFIDQLADAGLQVIEATAFVSPKWVPQMADHAEVMRGLRRRAGVRYPVLVPNMKGYEAARAAGADEIAVFAAASEAFSQKNINCSIAESLERFEPVLAAARADGVAVRGYVSCVLGCPYQGEVPLADVVRVAKALYEMGCYEVSLGDTIGVGTPAKARAMIEAVAQA-VPVERLAAHFHDTWGQALANLYAVLEMGVATVDSSAAGLGGCPYAKGASGNVATEDVVYLLNGLGIETGVDLEKLAAAGRYINAQLG--RAPASKAA 293
[Close]
BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: A0A5J6MXA3_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MXA3_9PROT)

HSP 1 Score: 343 bits (880), Expect = 2.050e-114
Identity = 179/295 (60.68%), Postives = 226/295 (76.61%), Query Frame = 1 
Query:  124 KLPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAA 1008
            +LP  V ++EVGPRDGLQNE  P+ A +KI  +++L+A+GLR IEA +FVSPKWVPQMAD A V+AG++R P  RY  LVPNLKG E A + K  E+A+FA+ASE+FSQRNINC+IAESIERFRP   AA    +P+RGY+SCALGCP+EGA+ PA V  V++ALL +GC EI + DT+G GTP +A A + A A   VP  RLA HFHDTYGQAL+NIL  L++G+ TVD++ AGLGGCPYAPGA+GNVA+EDV+Y+L G  + TGVDL+ L +A  +IC ALG  R PA+  A
Sbjct:    2 RLPRSVRMIEVGPRDGLQNEMKPVPAATKIQLIDKLSASGLREIEAGAFVSPKWVPQMADSAEVLAGIERWPDRRYPVLVPNLKGYEAAAAGKADEIAIFAAASESFSQRNINCSIAESIERFRPVAEAAGRDHVPMRGYVSCALGCPYEGAIAPAKVAEVSKALLDLGCYEISLGDTIGVGTPGKAQAMVEAVAVQ-VPRERLAVHFHDTYGQALSNILATLELGIATVDSSVAGLGGCPYAPGASGNVASEDVLYMLTGLDIETGVDLDLLAEAGAFICQALG--RQPASRVA 293
[Close]
BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: A0A848Z3G0_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z3G0_9PROT)

HSP 1 Score: 343 bits (879), Expect = 3.110e-114
Identity = 183/299 (61.20%), Postives = 228/299 (76.25%), Query Frame = 1 
Query:  127 LPPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKV-----HEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAA 1008
            LP  VT+VEVGPRDGLQNE TP+    +IG ++RLAAAGL  +EA +FVSPK VPQMAD AAV+AG+DR  GVRY  LVPN+KG E A++A V      E+AVF +ASE+FS+RNINC+I ES+ERF P   AA + G+ VRGY+SC LGCP+EG V PAAV RVA  L+A+GC EI + DT+GAGTP +A + +   A   VPL RLA HFHDT+GQALAN+  AL+ G+  +D A +GLGGCPYAPGA+GNVATEDV+Y+L+G G+ TGV ++RLL+AS +IC ALG  R PA+ AA
Sbjct:    3 LPSRVTLVEVGPRDGLQNEPTPVPVSVRIGLIDRLAAAGLPVVEAGAFVSPKRVPQMADTAAVLAGIDRIQGVRYPVLVPNMKGFEAALAAGVGQPGLDEIAVFGAASESFSRRNINCSIDESLERFAPVAEAAVARGIRVRGYVSCVLGCPYEGVVKPAAVARVASGLMAIGCGEISLGDTIGAGTPGKARSMIERVARE-VPLERLAVHFHDTFGQALANLYAALEAGIAVIDCAVSGLGGCPYAPGASGNVATEDVLYMLDGLGIETGVAMDRLLEASRFICEALG--RPPASRAA 298
[Close]
BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: A0A521YSD7_9BURK (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Aquabacterium sp. TaxID=1872578 RepID=A0A521YSD7_9BURK)

HSP 1 Score: 343 bits (879), Expect = 3.220e-114
Identity = 186/290 (64.14%), Postives = 216/290 (74.48%), Query Frame = 1 
Query:  130 PPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALGGGRLPAA 999
            P  VT+VEVGPRDGLQNE  P+SA  KI  V RLAAAGL+ IEA SFVSPKWVPQMA  A VMAGV R  GVRY AL PN+KGL+G + AK  EV VFASASE FS+RNINC+I ESIERF P    A  AGL VRG +SCA+GCPF+G V P  V RV  AL A+G   + +ADT+G GTPLR  AAL  A A   PL +++ HFHDTYGQALANIL +L++GV   DA+ AGLGGCPYAPGATGNVATEDVVY+L G G+ TGVDL+ L++A  +IC  +G  R PA+
Sbjct:    4 PTRVTLVEVGPRDGLQNESAPVSAADKIELVRRLAAAGLKEIEAASFVSPKWVPQMATSAEVMAGVPRGNGVRYSALAPNMKGLQGVLEAKADEVVVFASASEAFSRRNINCSIEESIERFAPVVQGALEAGLKVRGAVSCAVGCPFQGEVAPGEVERVVVALKAIGVQHMGIADTIGVGTPLRVRAALERALAH-YPLHQVSGHFHDTYGQALANILASLELGVHVFDASVAGLGGCPYAPGATGNVATEDVVYMLHGMGIDTGVDLDALIEAGQWICERIG--REPAS 290
[Close]
BLAST of jgi.p|Trimin1|168111 vs. uniprot
Match: Q2W9J8_MAGSA (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) TaxID=342108 RepID=Q2W9J8_MAGSA)

HSP 1 Score: 342 bits (878), Expect = 3.250e-114
Identity = 177/283 (62.54%), Postives = 217/283 (76.68%), Query Frame = 1 
Query:  130 PPEVTIVEVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMADGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQRNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVGRVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFHDTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLLEGCGVRTGVDLERLLDASDYICGALG 978
            P  V IVEVGPRDGLQNE  P++ E ++G +NRL   GL  IE+ SFVSPKWVPQMA  A VMA + R PGV Y  L PNL+GLE A++AKV EVAVFA+ASETFSQ+NINC+IAES+ERF P  A A + GL VRGY+SC LGCP+EGAV P+AV  VAE L+A+GC EI + DTVG GTP +A A + A  A  +P+  LAAHFHDTYGQALAN+L  ++ GV  +D++ AGLGGCPYA GA GNVA+ED+VY+L G G+ TG+DL+RL++A  +IC ALG
Sbjct:    4 PSRVKIVEVGPRDGLQNEARPVAVEIRVGLINRLTGTGLTAIESGSFVSPKWVPQMAATAEVMAAITRRPGVAYPVLTPNLQGLEAALAAKVEEVAVFAAASETFSQKNINCSIAESLERFAPLAARAKAEGLRVRGYVSCVLGCPYEGAVEPSAVAGVAEKLVAMGCYEISLGDTVGVGTPAKAQAMIDAVTAR-LPVEMLAAHFHDTYGQALANLLAVMERGVAVMDSSVAGLGGCPYAKGAAGNVASEDLVYMLNGMGIHTGIDLDRLIEAGTFICEALG 285
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168111 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBJ2_9STRA3.690e-230100.00Hydroxymethylglutaryl-CoA lyase n=1 Tax=Tribonema ... [more]
UPI001872DDD51.720e-11766.08hydroxymethylglutaryl-CoA lyase n=1 Tax=Pelagibius... [more]
A0A843RMC0_9PROT9.840e-11765.65Hydroxymethylglutaryl-CoA lyase n=1 Tax=Kiloniella... [more]
A0A6A5L0Y2_LUPAL7.470e-11663.38Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A2U1VHB5_9PROT7.470e-11663.16Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
UPI000404BBC83.230e-11563.27hydroxymethylglutaryl-CoA lyase n=1 Tax=Chitinimon... [more]
A0A5J6MXA3_9PROT2.050e-11460.68Hydroxymethylglutaryl-CoA lyase n=1 Tax=Hypericiba... [more]
A0A848Z3G0_9PROT3.110e-11461.20Hydroxymethylglutaryl-CoA lyase n=1 Tax=Inquilinus... [more]
A0A521YSD7_9BURK3.220e-11464.14Hydroxymethylglutaryl-CoA lyase n=1 Tax=Aquabacter... [more]
Q2W9J8_MAGSA3.250e-11462.54Hydroxymethylglutaryl-CoA lyase n=1 Tax=Magnetospi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_55contigContig_55:113802..114863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|168111|e_gw1.55.37.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00502,RC00503,RC01118,RC01946
KEGG ReactionR01360,R08090
KEGG ModuleM00036,M00088
KEGG Pathwayko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146
KEGG koko:K01640
EC4.1.3.4
Descriptionhydroxymethylglutaryl-CoA lyase activity
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0119@1|root,KOG2368@2759|Eukaryota
Evalue3.61e-112
Seed ortholog2880.D8LQ51
Hectar predicted targeting categorymitochondrion
TranscriptId168433
TrackFilteredModels1
ProteinId168111
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168111gene_7249Tribonema minus UTEX_B_3156 geneContig_55 113802..114863 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7249_1exon_7249_1Tribonema minus UTEX_B_3156 exonContig_55 113802..114863 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7249CDS_7249Tribonema minus UTEX_B_3156 CDSContig_55 113802..114863 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168111Trimin1|168111|e_gw1.55.37.1Tribonema minus UTEX_B_3156 polypeptideContig_55 113802..114863 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7249 ID=mRNA_7249|Name=jgi.p|Trimin1|168111|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1062bp|location=Sequence derived from alignment at Contig_55:113802..114863+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGCGGCCAGCATTCCGATGGGTTAGGCGAGTCCAGCCCGGCAGCGC
TGCCGGCGCCTTTACTTCACGCCACTTGAACAACAGTGCCAGCACCGCGG
CCCCAGACAATGACAGTGCCCCTAAGCTTCCTCCAGAAGTCACCATCGTG
GAGGTAGGACCTAGAGACGGGCTTCAGAACGAGCGTACCCCCATCAGCGC
AGAGAGCAAGATTGGCTTCGTCAATCGCCTGGCTGCAGCTGGCCTGCGAA
GAATCGAGGCGGTGTCATTCGTGAGCCCCAAATGGGTGCCGCAGATGGCA
GATGGAGCGGCGGTCATGGCTGGCGTAGATCGCCCCCCAGGCGTCCGCTA
CATGGCCCTGGTGCCTAATTTGAAAGGCTTGGAGGGAGCGGTGTCCGCCA
AGGTGCACGAGGTGGCCGTCTTCGCCTCCGCCTCCGAGACCTTCAGCCAG
CGCAACATCAACTGCACCATCGCCGAGAGCATCGAGCGCTTCAGGCCCGC
GTGCGCCGCCGCCGCCTCCGCCGGCCTCCCCGTCCGCGGCTACATCTCCT
GCGCGCTGGGCTGCCCCTTCGAGGGCGCCGTCCCCCCCGCCGCAGTCGGC
CGCGTCGCCGAGGCGCTGCTCGCCGTCGGCTGCGCCGAGATCTGCGTCGC
GGACACGGTCGGCGCGGGCACGCCGCTGCGCGCCGCCGCCGCGCTGCGCG
CCGCCGCCGCCGCCGGCGTCCCGCTGCTGCGCCTCGCCGCGCACTTCCAC
GACACGTACGGCCAGGCGCTCGCCAACATCCTGACGGCGCTGCAGATGGG
CGTCACGACGGTCGACGCGGCCGCGGCGGGGCTCGGCGGCTGCCCGTACG
CGCCCGGCGCCACCGGAAACGTCGCCACGGAGGACGTCGTGTACTTGCTC
GAGGGCTGCGGCGTGCGGACGGGCGTGGATCTGGAGCGGCTGCTCGACGC
GAGCGACTACATCTGCGGCGCGCTCGGCGGCGGCAGGCTGCCCGCCGCCG
GCGCGGCGCGCGCGCTGCTGCTCAGGCGCAGGGCTGCGGCGGGTGCGGCG
GCGCAGCAATAG
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protein sequence of jgi.p|Trimin1|168111

>Trimin1|168111|e_gw1.55.37.1 ID=Trimin1|168111|e_gw1.55.37.1|Name=jgi.p|Trimin1|168111|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=354bp
MLRPAFRWVRRVQPGSAAGAFTSRHLNNSASTAAPDNDSAPKLPPEVTIV
EVGPRDGLQNERTPISAESKIGFVNRLAAAGLRRIEAVSFVSPKWVPQMA
DGAAVMAGVDRPPGVRYMALVPNLKGLEGAVSAKVHEVAVFASASETFSQ
RNINCTIAESIERFRPACAAAASAGLPVRGYISCALGCPFEGAVPPAAVG
RVAEALLAVGCAEICVADTVGAGTPLRAAAALRAAAAAGVPLLRLAAHFH
DTYGQALANILTALQMGVTTVDAAAAGLGGCPYAPGATGNVATEDVVYLL
EGCGVRTGVDLERLLDASDYICGALGGGRLPAAGAARALLLRRRAAAGAA
AQQ*
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mRNA from alignment at Contig_55:113802..114863+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7249 ID=mRNA_7249|Name=jgi.p|Trimin1|168111|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1062bp|location=Sequence derived from alignment at Contig_55:113802..114863+ (Tribonema minus UTEX_B_3156 )
ATGCTGCGGCCAGCATTCCGATGGGTTAGGCGAGTCCAGCCCGGCAGCGC
TGCCGGCGCCTTTACTTCACGCCACTTGAACAACAGTGCCAGCACCGCGG
CCCCAGACAATGACAGTGCCCCTAAGCTTCCTCCAGAAGTCACCATCGTG
GAGGTAGGACCTAGAGACGGGCTTCAGAACGAGCGTACCCCCATCAGCGC
AGAGAGCAAGATTGGCTTCGTCAATCGCCTGGCTGCAGCTGGCCTGCGAA
GAATCGAGGCGGTGTCATTCGTGAGCCCCAAATGGGTGCCGCAGATGGCA
GATGGAGCGGCGGTCATGGCTGGCGTAGATCGCCCCCCAGGCGTCCGCTA
CATGGCCCTGGTGCCTAATTTGAAAGGCTTGGAGGGAGCGGTGTCCGCCA
AGGTGCACGAGGTGGCCGTCTTCGCCTCCGCCTCCGAGACCTTCAGCCAG
CGCAACATCAACTGCACCATCGCCGAGAGCATCGAGCGCTTCAGGCCCGC
GTGCGCCGCCGCCGCCTCCGCCGGCCTCCCCGTCCGCGGCTACATCTCCT
GCGCGCTGGGCTGCCCCTTCGAGGGCGCCGTCCCCCCCGCCGCAGTCGGC
CGCGTCGCCGAGGCGCTGCTCGCCGTCGGCTGCGCCGAGATCTGCGTCGC
GGACACGGTCGGCGCGGGCACGCCGCTGCGCGCCGCCGCCGCGCTGCGCG
CCGCCGCCGCCGCCGGCGTCCCGCTGCTGCGCCTCGCCGCGCACTTCCAC
GACACGTACGGCCAGGCGCTCGCCAACATCCTGACGGCGCTGCAGATGGG
CGTCACGACGGTCGACGCGGCCGCGGCGGGGCTCGGCGGCTGCCCGTACG
CGCCCGGCGCCACCGGAAACGTCGCCACGGAGGACGTCGTGTACTTGCTC
GAGGGCTGCGGCGTGCGGACGGGCGTGGATCTGGAGCGGCTGCTCGACGC
GAGCGACTACATCTGCGGCGCGCTCGGCGGCGGCAGGCTGCCCGCCGCCG
GCGCGGCGCGCGCGCTGCTGCTCAGGCGCAGGGCTGCGGCGGGTGCGGCG
GCGCAGCAATAG
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Coding sequence (CDS) from alignment at Contig_55:113802..114863+

>mRNA_7249 ID=mRNA_7249|Name=jgi.p|Trimin1|168111|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1062bp|location=Sequence derived from alignment at Contig_55:113802..114863+ (Tribonema minus UTEX_B_3156 )
ATGCTGCGGCCAGCATTCCGATGGGTTAGGCGAGTCCAGCCCGGCAGCGC
TGCCGGCGCCTTTACTTCACGCCACTTGAACAACAGTGCCAGCACCGCGG
CCCCAGACAATGACAGTGCCCCTAAGCTTCCTCCAGAAGTCACCATCGTG
GAGGTAGGACCTAGAGACGGGCTTCAGAACGAGCGTACCCCCATCAGCGC
AGAGAGCAAGATTGGCTTCGTCAATCGCCTGGCTGCAGCTGGCCTGCGAA
GAATCGAGGCGGTGTCATTCGTGAGCCCCAAATGGGTGCCGCAGATGGCA
GATGGAGCGGCGGTCATGGCTGGCGTAGATCGCCCCCCAGGCGTCCGCTA
CATGGCCCTGGTGCCTAATTTGAAAGGCTTGGAGGGAGCGGTGTCCGCCA
AGGTGCACGAGGTGGCCGTCTTCGCCTCCGCCTCCGAGACCTTCAGCCAG
CGCAACATCAACTGCACCATCGCCGAGAGCATCGAGCGCTTCAGGCCCGC
GTGCGCCGCCGCCGCCTCCGCCGGCCTCCCCGTCCGCGGCTACATCTCCT
GCGCGCTGGGCTGCCCCTTCGAGGGCGCCGTCCCCCCCGCCGCAGTCGGC
CGCGTCGCCGAGGCGCTGCTCGCCGTCGGCTGCGCCGAGATCTGCGTCGC
GGACACGGTCGGCGCGGGCACGCCGCTGCGCGCCGCCGCCGCGCTGCGCG
CCGCCGCCGCCGCCGGCGTCCCGCTGCTGCGCCTCGCCGCGCACTTCCAC
GACACGTACGGCCAGGCGCTCGCCAACATCCTGACGGCGCTGCAGATGGG
CGTCACGACGGTCGACGCGGCCGCGGCGGGGCTCGGCGGCTGCCCGTACG
CGCCCGGCGCCACCGGAAACGTCGCCACGGAGGACGTCGTGTACTTGCTC
GAGGGCTGCGGCGTGCGGACGGGCGTGGATCTGGAGCGGCTGCTCGACGC
GAGCGACTACATCTGCGGCGCGCTCGGCGGCGGCAGGCTGCCCGCCGCCG
GCGCGGCGCGCGCGCTGCTGCTCAGGCGCAGGGCTGCGGCGGGTGCGGCG
GCGCAGCAATAG
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