mRNA_7135 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A835Z197_9STRA (Plastid ribosomal protein S1 (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z197_9STRA) HSP 1 Score: 677 bits (1747), Expect = 1.230e-245 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 1 Query: 1 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL 1053 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL Sbjct: 1 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL 351
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: D7FRA4_ECTSI (Plastid ribosomal protein S1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA4_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 3.140e-165 Identity = 235/351 (66.95%), Postives = 299/351 (85.19%), Query Frame = 1 Query: 1 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL 1053 P + F+K+K ++KG + D +E+ +Y+ F +L++ +VSF RGE V G V+Q+E G L+DIGAKA+AY+P REA+L E +E L +D++++ M+ISDENEMGQV +S+RR+++EKAW +V+DM D VF+ ++AVN+GGAIVLVEGLR FLPGSH+CGG+P+E+ VG+++ +KFLEVN+E +KLVVSNRRAV+E EM+EL+RGDVVEG +KAIKPYGAFVEIRGMSGLLHISQIS+DRIEDL +I+Q+GM +KCMIIDHDKV GRIALSTKTLEPEPGDM+KNPQKV+D+AE TAAKYH+RME ERKARE+AAK IVMGLGDGLDSFD+DVLAGI DGI+SVL Sbjct: 79 PPNRFDKIKAQYKGVTTAL-DLSEETAAYEDFQTLLTDNKVSFERGEIVKGTVIQFEPSGALIDIGAKATAYMPAREASLDEVESMEGLLELDETMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEDMQAEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKYKFLEVNAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVL 428
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A7S2BGG1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BGG1_9STRA) HSP 1 Score: 422 bits (1084), Expect = 8.650e-144 Identity = 214/334 (64.07%), Postives = 265/334 (79.34%), Query Frame = 1 Query: 1 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDS 1002 P S FE+++ RWKG P+ + D + SY F L + +F RG+ + G VVQYE +G LVDIGAK++A++PLREAAL+P D+ +ID++ +F +IS+E+E GQ+ +S+RRLEF+ AW +V D FD EV+ VN+GGAIV V GLRAFLPGSHLCG +PSEE++G+ KFLEVN ETNKLVVSNRRAVVE +M+EL+RGDVV+G +KAIKPYGAFVEI GMSGLLHISQISYDRIEDL +V++ +KCMIIDHDKV GRIALSTKTLEPEPGDMLK+P+ VF+ AEETAAKYHERMEAER+AREEAAK IVMGLG+ L++ Sbjct: 55 PMSKFERLQSRWKGEPRPV-DETKAGFSYDAFEAGLGDTSCAFARGDVIPGKVVQYEYQGALVDIGAKSAAFMPLREAALIPDGDVATAVSIDETRDFQIISEEDENGQLLVSIRRLEFQNAWDKVLASQVEDKAFDGEVIGVNRGGAIVNVHGLRAFLPGSHLCGAIPSEEIIGQSFRLKFLEVNQETNKLVVSNRRAVVEDQMRELSRGDVVQGVVKAIKPYGAFVEIAGMSGLLHISQISYDRIEDLSTVVELNSLIKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAEETAAKYHERMEAERRAREEAAKDIVMGLGEDLET 387
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A7S2SEK7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEK7_9STRA) HSP 1 Score: 417 bits (1071), Expect = 7.580e-142 Identity = 209/334 (62.57%), Postives = 263/334 (78.74%), Query Frame = 1 Query: 1 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDS 1002 P + +++M WKG +R + + Y +F+ L Q F RG+ +TG VVQ++ +G LVDIGAKA+A++P+REA+L+P D+ + +I +S EF +ISDE++ GQ+ +S+RRLEF+KAW + + D D +V+ VN+GGAIV V GLRAFLPGSHLCG +P+++++G+ L KFLEVN E NK++VSNRRAVVE +MQELARGDVV+G +KAIKPYGAFVEI GMSGLLHISQISYDRI+DL I+Q +KCMIIDHDKV GRIALSTKTLEPEPGDM+K+ Q+VFDLAEETAAKYHERMEAERKAREEAAK IVMGLGD LDS Sbjct: 51 PLTKWDRMSTNWKGA-RRTANLDKAGFGYDEFSTFLEGQDYKFARGDVITGTVVQFDFQGALVDIGAKAAAFMPIREASLIPVSDVGEVLDIHESREFQIISDEDDQGQLQVSLRRLEFQKAWDHIMSIQSEDKALDCDVLGVNRGGAIVSVHGLRAFLPGSHLCGVLPTDDIIGQTLKVKFLEVNQENNKIIVSNRRAVVEDQMQELARGDVVQGVVKAIKPYGAFVEISGMSGLLHISQISYDRIDDLSTIIQPNTIIKCMIIDHDKVNGRIALSTKTLEPEPGDMMKDSQRVFDLAEETAAKYHERMEAERKAREEAAKDIVMGLGDDLDS 383
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A7S2H459_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H459_9STRA) HSP 1 Score: 407 bits (1046), Expect = 5.930e-138 Identity = 214/360 (59.44%), Postives = 275/360 (76.39%), Query Frame = 1 Query: 7 SHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCE--DIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSF---------DTDVLAGITDGIDSVL 1053 + F+++K +KGP + D D SY +F + + +FNR + V G VVQY+ G +VDIGAKASA+LP+ EAALV + IE++ +ID +F +IS+E+E GQ+ +SVRR+++ +AW +V M+ D VF+A V VN+GGAI LVEGLRAFLPGSHL G +P+E+L+G+ LP KFLEVN E NKLVVSNRRAVVE +M +L+RGD++ G +KA+KPYGAFVE+ GMSGLLHISQISYDRI+DL ++Q G VKCMIIDHDKV GRIALSTKTLEPEPGDML++P +V+D+AEETAA+YHERMEAERKAREEAAK IV+GLGD LD D+D LA ++D +DS+L Sbjct: 59 TRFDRLKKSYKGPKIDLSDEGLDF-SYGEFDEAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPINEAALVLEQGAQIESVIDIDQERDFQIISEEDENGQLLVSVRRIQYREAWDKVVAMNADDGVFEATCVGVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMADLSRGDIINGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGDQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPARVYDMAEETAARYHERMEAERKAREEAAKDIVLGLGDSLDDLTGDGDGEGGDSDPLADVSDNLDSLL 417
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A7S1FV14_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FV14_9STRA) HSP 1 Score: 406 bits (1043), Expect = 9.860e-138 Identity = 216/351 (61.54%), Postives = 267/351 (76.07%), Query Frame = 1 Query: 7 SHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVP--CEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL 1053 + F+++K WKGP + DT+ D SY F +L E V+FNR + V G VVQYE+ G L+DIGAK+SAYLPL EAAL+ + IE L +D EF +ISDE+E GQ+ +S +R+++ AW++V + D VFDA+VVAVN+GGAI LVEGLRAFLPGSHL G +P + L+G LP KFLEVN E NKLVVSNRRAVVE +M +L+RGD++ G I A+KPYGAFV++ GMSGLLHISQISYDRI+DL A+ G AVKCMIIDHDKV GRIALSTKTLEPEPGDMLK+ +VF++AEETAAKYHERMEAER AREEAA+ I +GLGD LD + ++D +DSVL Sbjct: 57 TRFDRLKKSWKGPMPNV-DTSGVDFSYGDFEAILDESLVAFNRNDIVKGTVVQYEKAGALIDIGAKSSAYLPLPEAALLQGQTDGIEDLVELDSEHEFQIISDEDENGQLLVSRKRIQYAAAWEKVASLQVTDDVFDAKVVAVNRGGAICLVEGLRAFLPGSHLTGRIPDDGLIGETLPLKFLEVNQENNKLVVSNRRAVVEAQMADLSRGDLISGVILALKPYGAFVQVGGMSGLLHISQISYDRIDDLSAVFNPGDAVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDSGRVFEMAEETAAKYHERMEAERVAREEAAREIGLGLGDDLDD-----IGEMSDDLDSVL 401
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A7S3QC88_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC88_9STRA) HSP 1 Score: 404 bits (1038), Expect = 4.310e-137 Identity = 215/356 (60.39%), Postives = 271/356 (76.12%), Query Frame = 1 Query: 7 SHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCED--IEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGL-----DSFDTDVLAGITDGIDSVL 1053 S F+++K +KGP + + + D SY FAD ++ SFNR + V G VVQYE G +VDIGAK+SA+LP +E++L + +E+L ++D ++F +IS+E+E GQ+ +SVRR+++ +AW++V D VF+AEVVAVN+GGAI LVEGLRAFLPGSHL G +P+E+L+G+ L KFLEVN E NKLVVSNRRAVVE +M L+RGD++ G +KA+KPYGAFVE+ GMSGLLHISQISYDRIEDL ++Q G VKCMIIDHDKV GRIALSTKTLEPEPGDML + KVF+LAEETA KYHERMEAERKAREEA K IVMGLGD L D D LA ++D +DS+L Sbjct: 39 SRFDRLKKNYKGP-QVVVSSEGLDFSYDDFADAVANTDYSFNRNDVVKGTVVQYENGGCVVDIGAKSSAFLPTQESSLFMPQGATLESLVDLDTEMDFQIISEEDENGQLLVSVRRIQYRQAWEKVIAQQTEDEVFEAEVVAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLALKFLEVNQEDNKLVVSNRRAVVEQQMSNLSRGDIIGGVVKALKPYGAFVEVGGMSGLLHISQISYDRIEDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLTDSAKVFELAEETAKKYHERMEAERKAREEATKDIVMGLGDSLADLTSDDEGEDPLADVSDNLDSLL 393
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A7S4QHK0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QHK0_9STRA) HSP 1 Score: 404 bits (1038), Expect = 3.200e-136 Identity = 215/361 (59.56%), Postives = 273/361 (75.62%), Query Frame = 1 Query: 7 SHFEKMKMRWKGPPKRIFDTAED-DESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALV--PCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLD---------SFDTDVLAGITDGIDSVL 1053 S F+++K +KGP +I E D SY F + +FNR + V G VVQY+ G +VDIGAKASA+LP EA+L+ +DIE L N+D+ F +IS+E+E GQ+ +SVRR+++ +AW V + D VF+A VV VN+GGAI LV+GLRAFLPGSHL G +P+E+L+G+ LP KFLEVN E NKLVVSNRRAVVE +M +L+RGD++ G +KA+KPYGAFVE+ GMSGLLHISQISYDRI+DL ++Q G VKCMIIDHDKV GRIALSTKTLEPEPGDML++P++VF++AEETAA+YHERMEAERKAREEAAK IV+GLGD LD S +D LA ++D +DS+L Sbjct: 95 SRFDRLKAAYKGP--QIVKNDEGLDFSYDDFDSAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPTAEASLIMNQGDDIEDLINVDEERNFQIISEEDENGQLLVSVRRIQYREAWDTVIAKNAEDGVFEATVVGVNRGGAICLVDGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMSDLSRGDIITGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGTQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPKRVFEMAEETAARYHERMEAERKAREEAAKDIVLGLGDSLDDLTSSSDDDSEGSDPLADVSDNLDSLL 453
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: K0SKF0_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKF0_THAOC) HSP 1 Score: 400 bits (1028), Expect = 6.700e-136 Identity = 210/353 (59.49%), Postives = 265/353 (75.07%), Query Frame = 1 Query: 7 SHFEKMKMRWKGPPKRIFDTAEDDE--SYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCE--DIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL 1053 + F+++K +KGP I ED+ SY F + +S SFNR + VTG VVQY++ G +VDIGAK+SA+LP +EAALV + IE L +D EF +IS+E+E GQ+ +SVRR+E+ +AW +V D VFDAE V+VN+GGAI LVEGLRAFLPGSHL G +P E+LVG+ LP KFLEVN E NKLVVSNRRAVVET+M+ L+RGDV++G +KA+KPYGAFVE+ GMSGLLHISQIS DRI DL A++Q G +KCMIIDHDK GRIALSTKTLEPEPGDM+++P++V+++AEETA Y ER E ERK REE+AK IV+GLGD LD D +D +DS+L Sbjct: 18 TRFDRIKANYKGPKVEISSGIEDEVGFSYDSFEEAVSATDYSFNRNDVVTGTVVQYDKGGCVVDIGAKSSAFLPQQEAALVQEQGAQIENLIELDAEREFQIISEEDENGQLLVSVRRIEYRQAWDKVVAKRDTDEVFDAECVSVNRGGAIFLVEGLRAFLPGSHLTGRLPDEDLVGQTLPLKFLEVNQEDNKLVVSNRRAVVETQMESLSRGDVIDGLVKALKPYGAFVEVGGMSGLLHISQISMDRINDLEAVLQPGQKIKCMIIDHDKANGRIALSTKTLEPEPGDMIRDPERVYEMAEETAKVYLERQEQERKKREESAKDIVLGLGDALDELTGDSAEDSSDNLDSIL 370
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Match: A0A7S2S0K1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0K1_9STRA) HSP 1 Score: 400 bits (1027), Expect = 3.560e-135 Identity = 209/361 (57.89%), Postives = 265/361 (73.41%), Query Frame = 1 Query: 7 SHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVP--CEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDV----------LAGITDGIDSVL 1053 + F+++K WKG T + Y F ++ F R V+G VVQ+E G +VDIGAKASA+LP+ EAALV + IE L +D ++ +IS+E+E GQ+ +SVRR+++ +AW +V + D VFDA V+AVN+GGAI LVEGLRAFLPGSHL G +P+E+++G+ LP KFLEVN E NKLVVSNRRAVVE +M +L+RGD++ G +KA+KPYGAFVE+ GMSGLLHISQISYDRI+DL ++Q G VKCMIIDHDKV GRIALSTKTLEPEPGDML++ KVF+LAEETAAKYHERMEAERKAREE+AK IV+ LGD LD + D LA ++D +DS+L Sbjct: 50 TRFDRLKKNWKGAMPEKVSTENLNFDYSDFDAAVASVSYDFARNSVVSGTVVQFENAGCIVDIGAKASAFLPINEAALVQEQGDSIETLVELDKEMQVQIISEEDENGQLLVSVRRIQYREAWDKVRTLQTTDDVFDATVIAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDIIGQSLPLKFLEVNQEDNKLVVSNRRAVVEQQMADLSRGDIINGMVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDSAKVFELAEETAAKYHERMEAERKAREESAKSIVVSLGDTLDDLNNDSDADGEDAEDPLASVSDNLDSLL 410 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155666 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7135 ID=mRNA_7135|Name=jgi.p|Trimin1|155666|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1053bp|location=Sequence derived from alignment at Contig_21:139355..144396+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CCCACATCGCATTTCGAGAAAATGAAGATGCGGTGGAAGGGTCCTCCCAAback to top protein sequence of jgi.p|Trimin1|155666 >Trimin1|155666|gw1.21.181.1 ID=Trimin1|155666|gw1.21.181.1|Name=jgi.p|Trimin1|155666|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=351bp PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTback to top mRNA from alignment at Contig_21:139355..144396+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7135 ID=mRNA_7135|Name=jgi.p|Trimin1|155666|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5042bp|location=Sequence derived from alignment at Contig_21:139355..144396+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_21:139355..144396+ >mRNA_7135 ID=mRNA_7135|Name=jgi.p|Trimin1|155666|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1053bp|location=Sequence derived from alignment at Contig_21:139355..144396+ (Tribonema minus UTEX_B_3156 )back to top |