mRNA_7126 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|162613
Unique NamemRNA_7126
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: A0A836CHE3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE3_9STRA)

HSP 1 Score: 784 bits (2024), Expect = 5.630e-286
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 1 
Query:    1 MPPPRSSTSERSCARSVLDYYDHHVLSVLCRSRLLSFLSLYHRPAPAQPDNNNAPALADLRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALEREEEEAKVGVQRVIKA 1218
            MPPPRSSTSERSCARSVLDYYDHHVLSVLCRSRLLSFLSLYHRPAPAQPDNNNAPALADLRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALEREEEEAKVGVQRVIKA
Sbjct:    1 MPPPRSSTSERSCARSVLDYYDHHVLSVLCRSRLLSFLSLYHRPAPAQPDNNNAPALADLRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALEREEEEAKVGVQRVIKA 406
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BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: D8LTD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD1_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.240e-77
Identity = 145/314 (46.18%), Postives = 186/314 (59.24%), Query Frame = 1 
Query:  175 DLRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSS---RLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPK-GGYPAFEGYPQFVLDWQLEERRRVAGE 1104
            D R++L   G  P  HR  AW+ LL LP N   FA L +RGPH  A   ++ R+PLR R+   K   L SALAHWSP+  E E VP+ +FPF   F  +DL AFE A++    WG   LVTFPQPPVPVL G+E AL+R D  LAAHL+      + YGW LLRS FSEVLA + WL L D I A AH P+LL  AVV F ++ R  LL   S  + EAF+  +Q P +S   R+  VM K  +  Q          +  +D   A  ++ALL + +PQ   PLP+ G YP F+GYPQFV+++Q E R+RVA +
Sbjct:   14 DFRSMLHLRGGLPVEHRVTAWKFLLRLPGNSKQFAQLVSRGPHPTALASLSIRYPLRDRKLFRKAAVLLSALAHWSPILAEVEFVPSWLFPFCVVFGQDDLGAFEAAVSFFLHWGSRLLVTFPQPPVPVLAGMELALQRADRELAAHLKSLSVGALSYGWPLLRSAFSEVLAREEWLCLIDRILANAHQPELLEAAVVGFMVSFRKQLLVLESTEEAEAFFRRRQSPSTSDLQRIFRVMEKVSSYVQQPERLGGQVDSDGADVGEAMAALALL-RIAPQEFKPLPRVGPYPFFDGYPQFVINYQAEMRQRVAAQ 326
[Close]
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: A0A3R7WQ68_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WQ68_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.340e-63
Identity = 133/335 (39.70%), Postives = 188/335 (56.12%), Query Frame = 1 
Query:  178 LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAEN-VPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSR---LLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALE 1170
            L+ LLR++G FP  +R LAW+ +L LP N AA   L A+G HA  AR +   +P+++ R   +L  + SALAHW PV+GEA + VPA+VFPF++    ND+ AFE  ++VL  WGR +++ +P PP P L  ++AAL++ DA+L AH          YGWSL+ + FSEVLA D WL LWD++ A    P LL  AV+A+   NR +LL   + + ++A +H QQ     R    +H +   D   Q Q                             +  FPLP G YPAF  YP FV+D+Q++ER R+A +  AL  +R L  ++  RTR LE
Sbjct:   16 LQHLLRSYGRFPEKYRLLAWKYMLRLPNNTAALEQLMAKGSHATTAR-LRDLYPIQNTRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFVKVCVNNDVVAFEVVLSVLLHWGRDFVLQYPYPPRPQLTRLDAALQKRDAQLHAHFTSHRITPEEYGWSLVSTAFSEVLARDDWLCLWDNLIAYWDHPSLLWAAVLAYLTENRANLLQQSTASGIQAAFHQQQPMQVKRWIATMHAITLPDIIDQTQ---------------------------DDEKYFPLPPGQYPAFTRYPTFVVDYQIQERNRIATDEAALESKRRLLSEIEARTRELE 322
[Close]
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: A0A6A5B309_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B309_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.960e-62
Identity = 139/360 (38.61%), Postives = 194/360 (53.89%), Query Frame = 1 
Query:  130 PAPAQPDNNNAPALAD---------LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAEN-VPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSR---LLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALE 1170
            PAP  P     P L           L+ LLR++G FP  +R LAW+ +L LP N AA   L A+G HA  AR +   +P+++ R   +L  + SALAHW PV+GEA + VPA+VFPF++    ND+ AFE  ++VL  WGR +++ +P PP P L  ++AAL++ DA+L AH          YGWSL+ + FSEVLA D WL LWD++ A    P LL  AV+A+   NR +LL   + + ++A +H QQ     R    +H +   D   Q Q                             +  FPLP G YPAF  YP FV+D+Q++ER R+A +  AL  +R L  ++  RTR LE
Sbjct:   75 PAPLLPPPRAMPKLNPHEYAVQRRRLQHLLRSYGRFPEKYRLLAWKYMLRLPNNTAALEQLMAKGSHATTAR-LRDLYPIQNTRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFVKVCVNNDVVAFEVVLSVLLHWGRDFVLQYPYPPRPQLTRLDAALQKRDAQLHAHFTSHRITPEEYGWSLVSTAFSEVLARDDWLCLWDNLIAYWDHPSLLWAAVLAYLTENRANLLQQSTASGIQATFHQQQPMQVKRWIATMHAITLPDIIDQTQ---------------------------DDEKYFPLPPGQYPAFTRYPTFVVDYQIQERNRIATDEAALESKRRLLSEIEARTRELE 406
[Close]
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: F0WJH6_9STRA (TBC1 domain family member 31 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJH6_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.410e-61
Identity = 121/331 (36.56%), Postives = 195/331 (58.91%), Query Frame = 1 
Query:  178 LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALE 1170
            L+++LR +G +P  +R LAWR LL LP N  AF +L ++GPH      + + +P+R  R + +   + SAL +W P FGEA ++ A+V+PF++  + +DLAAFE +MT L  W  ++LV  PQPP+ +L  +E  L++ D +L  H    G    +YGWSLL++IF+EV+AGD W  LWDH+   A  P L  +A +A+ +  R +LL  + +  +  +YH Q      +L+ +M+  D     +  S+A   +  S A    ++          + F LPKG YPAF  YP+ V+D +++ER+++A E   +AE+R+L ++LR  ++ LE
Sbjct:  803 LKSILRCYGRYPNKYRLLAWRFLLDLPSNFEAFQSLLSKGPHPIL-NQVRESYPIRDNRLSRRFCRIMSALIYWCPAFGEATSLAAIVYPFVKLLKSDDLAAFEISMTFLLHWCGSYLVNLPQPPIKLLSVMERELKKLDPQLFDHFSNLGVGAEIYGWSLLQTIFTEVVAGDEWQCLWDHLITGAERPHLFVSAALAYNLYFRTALLRGKDQFSIHQYYHQQNPLQMDKLIQLMHNLDQQIDQEAASNALLYSVNSTACGVGKT----------NKFALPKGQYPAFTNYPKLVVDMKIKERQQIASEEAEIAEKRSLLDRLRKESKELE 1122
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BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: W4FZP9_9STRA (TBC1 domain family member 31 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZP9_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.620e-60
Identity = 139/360 (38.61%), Postives = 194/360 (53.89%), Query Frame = 1 
Query:  130 PAPAQPDNNNAPALAD---------LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAEN-VPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSR---LLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALE 1170
            PAP  P     P L           L+ LLR++G FP  +R LAW+ +L LP N AA   L A+G HA  AR +   +P+++ R   +L  + SALAHW PV+GEA + VPA+VFPF++    ND+ AFE  ++VL  WGR +++ +P PP P L  ++AAL++ DA+L AH          YGWSL+ + FSEVLA D WL LWD++ A    P LL  AV+A+   NR +LL   + + ++A +H QQ     R    +H +   D   Q Q                             +  FPLP G YPAF  YP FV+D+Q++ER R+A +  AL  +R L  ++  RTR LE
Sbjct:  425 PAPLLPPPRAMPKLNPHEYAVQRRRLQHLLRSYGRFPEKYRLLAWKYMLRLPNNTAALEQLMAKGSHATTAR-LRDLYPIQNTRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFVKVCVNNDVVAFEVVLSVLLHWGRDFVLQYPYPPRPQLARLDAALQKRDAQLHAHFTSHRITPEEYGWSLVSTAFSEVLARDDWLCLWDNLIAYWDHPSLLWAAVLAYLTENRANLLQQSTASGIQAAFHQQQPMQVKRWIATMHAITLPDIIDQTQ---------------------------DDEKYFPLPPGQYPAFTRYPTFVVDYQIQERNRIATDEAALESKRRLLSEIEARTRELE 756
[Close]
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: W2PIJ0_PHYPN (TBC1 domain family member 31 n=17 Tax=Phytophthora TaxID=4783 RepID=W2PIJ0_PHYPN)

HSP 1 Score: 219 bits (558), Expect = 1.850e-59
Identity = 126/331 (38.07%), Postives = 190/331 (57.40%), Query Frame = 1 
Query:  190 LRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALEREEE 1182
            L+ +G FP  +R L WR LL LP+N  AF +L A+G H    R +  ++PL+  R   +L  + SA+ +W P FGE   +PAVV+PF++ FR NDLAAFE +++VL  W   +L++ P PPV  +  IE  L R D++L  H  +    +  + WSLL++IF+EVL+ D W+ LWDH+FA +  PQL+  AV+ +    R +LLAA  R  +E F+H Q      + + +M         +   D +   A+ D AA   + +     S    +PLP+G YPAF  YP+FV+D+Q+ ER R+A E   LA ++ L +Q+   +  L+ E E
Sbjct:  498 LKVNGMFPRKYRVLVWRFLLRLPKNEEAFRSLVAKGKHPVFVR-LKDQYPLQDGRLFRRLHRILSAIVYWCPAFGEVSYLPAVVYPFVKIFRENDLAAFEASISVLLHWCGDFLISLPYPPVFAMRAIETELARRDSQLLDHFTRYQITSEAFAWSLLKTIFTEVLSEDEWMCLWDHLFAFSDTPQLIYVAVLTYLSYFRSALLAACDRFSIEQFFHQQNAIDIQKFVQLMMNL------REKLDLSEFTAIEDPAATDNAAS-----SQGPYWPLPRGQYPAFAHYPRFVVDFQISERNRIALEEAELARKQTLFDQIEQESAKLKAEHE 816
[Close]
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: A0A397F5N5_9STRA (Rab-GAP TBC domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F5N5_9STRA)

HSP 1 Score: 215 bits (547), Expect = 8.050e-59
Identity = 134/338 (39.64%), Postives = 188/338 (55.62%), Query Frame = 1 
Query:  178 LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAEN-VPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSR---LLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLE---ERRRVAGEVGALAERRALAEQLRDRTRALE 1170
            L+ LLR++G FP  +R LAW+ LL LP N AA   L A+G HA  AR +   +P+++ R   +L  + SALAHW PV+GEA + VPA+VFPF++    ND+ AFE  ++VL  WGR +++ +P PP P L  ++AAL++ DA+L AH          YGWSL+ + FSEVLA D WL LWD++ A    P LL  AV+A+   NR +LL   + + ++A +H QQ     R    +H +   D   Q Q                             +  FPLP G YPAF  YP FV+D+Q++   ER R+A +  AL  +R L  ++  RTR LE
Sbjct:   16 LQHLLRSYGRFPEKYRLLAWKYLLRLPNNTAALEQLMAKGSHATTAR-LRDLYPIQNIRLFRRLERVLSALAHWCPVYGEATSIVPALVFPFVKVCVNNDVVAFEVVLSVLLHWGRDFVLQYPYPPRPQLTRLDAALQKRDAQLHAHFTSHRITPEEYGWSLVSTAFSEVLARDDWLCLWDNLIAYWDHPSLLWAAVLAYLTENRANLLQQSTASGIQATFHQQQPMQVKRWIATMHAITLPDIIDQTQ---------------------------DDEKYFPLPPGQYPAFTRYPTFVVDYQIQVRSERNRIATDEAALESKRRLLSEIEARTRELE 325
[Close]
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: A0A833SDS8_PHYIN (TBC1 domain family member 31 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SDS8_PHYIN)

HSP 1 Score: 216 bits (551), Expect = 1.550e-58
Identity = 128/331 (38.67%), Postives = 192/331 (58.01%), Query Frame = 1 
Query:  190 LRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALEREEE 1182
            L+  G FP  +R L WR LL LP+N  AF +L A+G H    R +   +PL+  R   +L  L SA+ +W P FGE   +PAVV+PF++ FR NDLAAFE +++VL  W   +L++ P PPV  L  IE  L R D++L  H  +    +  + WSLL++IF+EVL+ D W+ LWDH+FA +  PQL+  AV+A+    R +LLAA  R  +E F+H Q      + + +M         +   D +  +A+ D AAA  + +     + +  +PL +G YPAF  YP+FV+D+Q+ ER R+A E   LA +++L +Q+   +  L+ E E
Sbjct:  499 LKVSGMFPRKYRVLVWRFLLRLPKNEEAFRSLVAKGKHPVFVR-LKDHYPLQDGRLFRRLHRLLSAIVYWCPAFGEVSYLPAVVYPFVKIFRENDLAAFEASISVLLHWCGDFLISLPYPPVFALRAIEHELARRDSQLFDHFTRYQITSEAFAWSLLKTIFTEVLSEDEWMCLWDHLFAFSDTPQLIYVAVLAYLSYFRTALLAACDRFSIEQFFHQQNAIDIQKFVQLMMNL------REKLDLSEFSAIEDPAAAGSTTS-----AHRPYWPLSRGQYPAFAHYPRFVVDFQISERNRIALEEAELARKQSLFDQIEQDSAKLKAEHE 817
[Close]
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Match: A0A1W0A9R1_9STRA (TBC1 domain family member 31 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9R1_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.960e-58
Identity = 130/332 (39.16%), Postives = 185/332 (55.72%), Query Frame = 1 
Query:  178 LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAF-PLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALE 1170
            L  LLR++ A+P  +R LAWR LL LP N  AF AL  +GPH +  R + +++P+ ++R   +L  + SA+A+W P FGEA+ +P++VFPF++    NDL AFE  +T L  WGR +LV +P PP+ +L  +E  L R D +L  H       +  YGWSL+RS+FSEVL+   WL LWDH+  A  DP  + +AV+AF   +R  +L   S   +E+F+H+QQ      L+  +                           Q +  L    S   A  PL KG YP F  YP FV+D+Q+EER R+A E   LA + +L  QL+ +T ALE
Sbjct:  427 LAQLLRSYQAYPERYRMLAWRYLLELPENMDAFTALLNKGPHPSFIR-LEKQYPIHNQRLFRRLQRVLSAIAYWCPAFGEADYLPSLVFPFVKVCENNDLMAFEVTLTFLLHWGRDFLVRYPYPPLHLLRVLEKELERRDPQLYLHFVDHNIQSETYGWSLVRSVFSEVLSRSNWLCLWDHLVTAFEDPGRIWSAVLAFLQISRSIILNLSSTVALESFFHTQQSVDMRLLIEWLE--------------------------QMTFPLPAPLSTDPALVPLAKGNYPVFRQYPHFVVDYQIEERNRIAREEAELAAKESLLFQLQKQTEALE 731
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162613 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHE3_9STRA5.630e-286100.00Rab-GAP TBC domain-containing protein n=1 Tax=Trib... [more]
D8LTD1_ECTSI6.240e-7746.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3R7WQ68_9STRA1.340e-6339.70Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A6A5B309_9STRA2.960e-6238.61Rab-GAP TBC domain-containing protein (Fragment) n... [more]
F0WJH6_9STRA1.410e-6136.56TBC1 domain family member 31 n=1 Tax=Albugo laibac... [more]
W4FZP9_9STRA3.620e-6038.61TBC1 domain family member 31 n=2 Tax=Aphanomyces a... [more]
W2PIJ0_PHYPN1.850e-5938.07TBC1 domain family member 31 n=17 Tax=Phytophthora... [more]
A0A397F5N5_9STRA8.050e-5939.64Rab-GAP TBC domain-containing protein n=6 Tax=Apha... [more]
A0A833SDS8_PHYIN1.550e-5838.67TBC1 domain family member 31 n=1 Tax=Phytophthora ... [more]
A0A1W0A9R1_9STRA1.960e-5839.16TBC1 domain family member 31 n=1 Tax=Thraustotheca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:95365..98537 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|162613|e_gw1.21.164.1
GOsGO:0003674,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005813,GO:0005815,GO:0005856,GO:0008047,GO:0008150,GO:0015630,GO:0030234,GO:0030695,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0050790,GO:0051336,GO:0051345,GO:0060589,GO:0065007,GO:0065009,GO:0098772
Preferred nameTBC1D31
Descriptionregulation of vesicle fusion
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1093@1|root,KOG1093@2759|Eukaryota
Evalue1.02e-77
Seed ortholog2880.D8LTD1
Hectar predicted targeting categoryother localisation
TranscriptId162935
TrackFilteredModels1
ProteinId162613
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162613gene_7126Tribonema minus UTEX_B_3156 geneContig_21 95365..98537 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7126_1exon_7126_1Tribonema minus UTEX_B_3156 exonContig_21 95365..96013 +
exon_7126_2exon_7126_2Tribonema minus UTEX_B_3156 exonContig_21 97359..97593 +
exon_7126_3exon_7126_3Tribonema minus UTEX_B_3156 exonContig_21 98201..98537 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7126CDS_7126Tribonema minus UTEX_B_3156 CDSContig_21 95365..96013 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162613Trimin1|162613|e_gw1.21.164.1Tribonema minus UTEX_B_3156 polypeptideContig_21 95365..98537 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7126 ID=mRNA_7126|Name=jgi.p|Trimin1|162613|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1221bp|location=Sequence derived from alignment at Contig_21:95365..98537+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCACCCCCGCGCTCGTCGACCTCCGAGCGAAGCTGCGCGCGATCAGT
CCTTGATTATTACGACCATCACGTGTTGTCTGTCCTCTGCCGCTCACGGC
TGTTGTCGTTTTTATCCTTATATCACAGGCCTGCACCTGCACAACCCGAC
AACAACAACGCCCCCGCGCTCGCCGACCTCCGAGCGCTGCTGCGCGCGCA
CGGCGCCTTCCCCGCCCCCCACCGCCCCCTCGCATGGCGCCTGCTGCTAA
GCCTGCCGCGCAACCGCGCCGCCTTTGCCGCCCTCACCGCGCGCGGCCCC
CACGCCGCCGCCGCCCGCCACATCGCTCAGCGCTTCCCGCTGCGCTCGCG
CCGCGATGCCGCCAAGCTCACGGCCCTCGCATCCGCTCTCGCGCACTGGT
CGCCGGTGTTCGGGGAAGCGGAGAACGTTCCTGCGGTCGTGTTCCCTTTC
TTGCGCGCGTTCCGCGGGAATGATCTCGCCGCGTTTGAGTGTGCGATGAC
GGTGCTGACGTGGTGGGGAAGGGCGTGGCTGGTGACGTTTCCGCAGCCGC
CGGTGCCGGTGCTGGTGGGGATAGAGGCGGCGCTGCGGCGGCACGACGCG
CGCCTAGCTGCGCATCTGCGCAAGTGCGGCGCGGACACGGTCGTGTATGG
TTGGAGTTTGCTGCGGTCCATCTTTTCAGAGGTGCTAGCGGGCGATGCCT
GGCTGCGTCTATGGGACCACATTTTCGCGGCAGCACACGATCCGCAGCTG
CTCAACACGGCAGTGGTGGCGTTTGCCATTGCCAACCGCGACTCTCTGCT
GGCTGCCAGGAGCCGTGCTGATGTTGAAGCGTTCTACCACAGCCAGCAGG
TGCCAGGTTCAAGTAGATTACTTCACGTGATGAACAAAGCAGACGCGTCA
TCACAGCCACAACGACATTCCGACGCGGCGACAGCGGCAGCAGTTTCAGA
CGCTGCAGCTGCACAGCGCTCAGTAGCGCTGCTGCTGCAGCGCTCACCAC
AGTCGGCGTTCCCCCTGCCTAAGGGGGGGTACCCCGCCTTTGAGGGGTAT
CCGCAGTTTGTGCTGGACTGGCAGCTGGAAGAGCGACGGCGCGTGGCTGG
GGAGGTGGGGGCTCTTGCGGAGAGGCGCGCGCTTGCTGAGCAACTGCGCG
ATAGGACCAGGGCGCTGGAAAGAGAAGAAGAAGAGGCAAAGGTAGGGGTA
CAGAGGGTGATAAAGGCATAG
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protein sequence of jgi.p|Trimin1|162613

>Trimin1|162613|e_gw1.21.164.1 ID=Trimin1|162613|e_gw1.21.164.1|Name=jgi.p|Trimin1|162613|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=407bp
MPPPRSSTSERSCARSVLDYYDHHVLSVLCRSRLLSFLSLYHRPAPAQPD
NNNAPALADLRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGP
HAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPF
LRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDA
RLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQL
LNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGSSRLLHVMNKADAS
SQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAFPLPKGGYPAFEGY
PQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALEREEEEAKVGV
QRVIKA*
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mRNA from alignment at Contig_21:95365..98537+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7126 ID=mRNA_7126|Name=jgi.p|Trimin1|162613|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3173bp|location=Sequence derived from alignment at Contig_21:95365..98537+ (Tribonema minus UTEX_B_3156 )
ATGCCACCCCCGCGCTCGTCGACCTCCGAGCGAAGCTGCGCGCGATCAGT
CCTTGATTATTACGACCATCACGTGTTGTCTGTCCTCTGCCGCTCACGGC
TGTTGTCGTTTTTATCCTTATATCACAGGCCTGCACCTGCACAACCCGAC
AACAACAACGCCCCCGCGCTCGCCGACCTCCGAGCGCTGCTGCGCGCGCA
CGGCGCCTTCCCCGCCCCCCACCGCCCCCTCGCATGGCGCCTGCTGCTAA
GCCTGCCGCGCAACCGCGCCGCCTTTGCCGCCCTCACCGCGCGCGGCCCC
CACGCCGCCGCCGCCCGCCACATCGCTCAGCGCTTCCCGCTGCGCTCGCG
CCGCGATGCCGCCAAGCTCACGGCCCTCGCATCCGCTCTCGCGCACTGGT
CGCCGGTGTTCGGGGAAGCGGAGAACGTTCCTGCGGTCGTGTTCCCTTTC
TTGCGCGCGTTCCGCGGGAATGATCTCGCCGCGTTTGAGTGTGCGATGAC
GGTGCTGACGTGGTGGGGAAGGGCGTGGCTGGTGACGTTTCCGCAGCCGC
CGGTGCCGGTGCTGGTGGGGATAGAGGCGGCGCTGCGGCGGCACGACGCG
CGCCTAGCTGCGCATCTGCGCAAGTGCGGCGCGGACACGGTCGTGTATGG
TGAGAGCTATTTGGCTGCTATGTAAACCTTCACATGAGGATTAGGGTTAG
GTTTCTACTTTCAACCCTAACTCTAGACTGAGGCAACGCTCAGGCGGCAC
CACGCGCACCTCGCAGCGCACTTGAGGATGTGGTGGTGTACAGTGAGAGC
TGCCTATGAGGGTTCGGCCTGGCCCGTCTGCTAACCCTAGCATGACTGAT
GTTGAAGCAGTGTGCGCGTTCGGGTTTGGGGGGAAGGTAAGGATTAGGGT
CGTGCTCAATTGGCGCACATCTGCGCTAGTTCGGCGCATATGTGGAAGTT
GTATGGTGAGAGAGCTCTTTTGCTAGCCCTATGACAAGAATTAGGCCTAG
ACTAGCCCTGAACCTACAAAGCACGAGTGATGGTGTCTGAGGCAGTGCTC
AAGTGGCTTGCCACAGACTTAAAGCAGTGCGGTGCATATGCGATGCGGTA
CTGTGAGCTCTTCAGGTTCTAACCCCAAGATCAGGCGCAGTCCTACTGCT
CATTCTAGATGAGCCCTCTTAGTGTCAGACGCACGTCTCACAACGCATGC
TGACCCTAACCCTAAGAGCGGCGCCAAAACGGCGGCGTGCAGGTGAGCTG
GTCGAAGTCCTAACCCTAGAATGAGGGCTAGTATAACCCTAACCCTACCC
TACATCAATGGGGATTGCAGCAGCGCTCAGGAGGCACAAATGGCCATAGC
TGGCCAGAGATTGAGAGTGTTACACTATTCTTCCTGGAAAGCGATATAAT
CCAGGGCAAGTGTTCGCTGTTAAGTCACTGTACTTGGTGCCGTGCACTCC
CCACACAAAGTCACAGTGTAGTACACTAATACACTCTTCATACAGTCTGT
GTTCTCTGTGGTCTTGTCAAGAGACACCGAGCGGGCCACCGCCTATGTAG
CTGCGCTGATGCATACCTGCCATACCTACATACCATACATACATGTATAC
AATGTTTTTTACATATATATTTACCTGCCACCATACCTACATGCCATACG
TACATACCAGTGTCTTGAGTCAGTGCTCAATCTGCAGCTGGCAGTCACTA
TCCTGTACTTTTCACACCATCACATAGTACTTGTGCATTACACCAACGGC
TGTACTCACCTTGCAGCTGCTTTTCTGCGTTCGCAGCAGTACATCTCATT
ACCACAAACATATTTACGTGCATACTGCCTGCCCTTGCACAGACAATACA
TCGTGCCTTACTTGGTTTGCTGTGCAGAATGGAGCCTGCTGCACTTCAAA
TGCAATTGCTACCATGCACACCAAGTTCTTGCTACAGGCATGAGCTGCCT
GTCTTCACCCAACAATACGTCTGTTTTCTCGGTATGCTGCACAGGTTGGA
GTTTGCTGCGGTCCATCTTTTCAGAGGTGCTAGCGGGCGATGCCTGGCTG
CGTCTATGGGACCACATTTTCGCGGCAGCACACGATCCGCAGCTGCTCAA
CACGGCAGTGGTGGCGTTTGCCATTGCCAACCGCGACTCTCTGCTGGCTG
CCAGGAGCCGTGCTGATGTTGAAGCGTTCTACCACAGCCAGCAGGTGCCA
GGTTCAAGTAGATTACTTCACGTGATGAAGTGAATTCATGGTCTTGTTCG
TGGATTTTTGGGCGAGCTCATGCCTCGGATGGACTGCCATGAAGCACTCT
GGAGTGCCACGACAGTTTGCATCAACTACGCTGGTAGCTTTCTACAACGC
AGGCACATGAATCCCACGCAAACTGCCTGTGCCCACTGTATTCAGAATAA
CAGTGTCATGTCAACTGCACTTGCATCCCCCTATTCATGTCCATTTCCGT
AGGACTGGTGCATATCAGGTGGTTTTTGGATGCCATTGGTATACAATGAT
TGGTCACTTTGATACCAACCCAGCACACCACCCTAGGATCCGTGGTGAAG
ACTTGTACCATAGGTGCTGTAGCAATACTGGAGCTGGACAATACGCACAA
TCGTCCCACACTATGCAGACACCAAGACAAATGCACAACACAAAACGACT
GCCAATACCATGTCAAAGCCTTCAAATTGATCCTTCAATGACCGTTTTCC
CTAGCCCTATTCCACCCCCAGCGCACTGCTAATCCAAAACTCCAACCCCT
GCTACCCCCCCCCTCCCCCCCCTTCCCCAGGGCACCGCGAGCATCGACAT
CATCATCGCACTCATGCACAGGCTGCACGCCATCAGCAAAGCAGACGCGT
CATCACAGCCACAACGACATTCCGACGCGGCGACAGCGGCAGCAGTTTCA
GACGCTGCAGCTGCACAGCGCTCAGTAGCGCTGCTGCTGCAGCGCTCACC
ACAGTCGGCGTTCCCCCTGCCTAAGGGGGGGTACCCCGCCTTTGAGGGGT
ATCCGCAGTTTGTGCTGGACTGGCAGCTGGAAGAGCGACGGCGCGTGGCT
GGGGAGGTGGGGGCTCTTGCGGAGAGGCGCGCGCTTGCTGAGCAACTGCG
CGATAGGACCAGGGCGCTGGAAAGAGAAGAAGAAGAGGCAAAGGTAGGGG
TACAGAGGGTGATAAAGGCATAG
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Coding sequence (CDS) from alignment at Contig_21:95365..98537+

>mRNA_7126 ID=mRNA_7126|Name=jgi.p|Trimin1|162613|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1221bp|location=Sequence derived from alignment at Contig_21:95365..98537+ (Tribonema minus UTEX_B_3156 )
ATGCCACCCCCGCGCTCGTCGACCTCCGAGCGAAGCTGCGCGCGATCAGT
CCTTGATTATTACGACCATCACGTGTTGTCTGTCCTCTGCCGCTCACGGC
TGTTGTCGTTTTTATCCTTATATCACAGGCCTGCACCTGCACAACCCGAC
AACAACAACGCCCCCGCGCTCGCCGACCTCCGAGCGCTGCTGCGCGCGCA
CGGCGCCTTCCCCGCCCCCCACCGCCCCCTCGCATGGCGCCTGCTGCTAA
GCCTGCCGCGCAACCGCGCCGCCTTTGCCGCCCTCACCGCGCGCGGCCCC
CACGCCGCCGCCGCCCGCCACATCGCTCAGCGCTTCCCGCTGCGCTCGCG
CCGCGATGCCGCCAAGCTCACGGCCCTCGCATCCGCTCTCGCGCACTGGT
CGCCGGTGTTCGGGGAAGCGGAGAACGTTCCTGCGGTCGTGTTCCCTTTC
TTGCGCGCGTTCCGCGGGAATGATCTCGCCGCGTTTGAGTGTGCGATGAC
GGTGCTGACGTGGTGGGGAAGGGCGTGGCTGGTGACGTTTCCGCAGCCGC
CGGTGCCGGTGCTGGTGGGGATAGAGGCGGCGCTGCGGCGGCACGACGCG
CGCCTAGCTGCGCATCTGCGCAAGTGCGGCGCGGACACGGTCGTGTATGG
TTGGAGTTTGCTGCGGTCCATCTTTTCAGAGGTGCTAGCGGGCGATGCCT
GGCTGCGTCTATGGGACCACATTTTCGCGGCAGCACACGATCCGCAGCTG
CTCAACACGGCAGTGGTGGCGTTTGCCATTGCCAACCGCGACTCTCTGCT
GGCTGCCAGGAGCCGTGCTGATGTTGAAGCGTTCTACCACAGCCAGCAGG
TGCCAGGTTCAAGTAGATTACTTCACGTGATGAACAAAGCAGACGCGTCA
TCACAGCCACAACGACATTCCGACGCGGCGACAGCGGCAGCAGTTTCAGA
CGCTGCAGCTGCACAGCGCTCAGTAGCGCTGCTGCTGCAGCGCTCACCAC
AGTCGGCGTTCCCCCTGCCTAAGGGGGGGTACCCCGCCTTTGAGGGGTAT
CCGCAGTTTGTGCTGGACTGGCAGCTGGAAGAGCGACGGCGCGTGGCTGG
GGAGGTGGGGGCTCTTGCGGAGAGGCGCGCGCTTGCTGAGCAACTGCGCG
ATAGGACCAGGGCGCTGGAAAGAGAAGAAGAAGAGGCAAAGGTAGGGGTA
CAGAGGGTGATAAAGGCATAG
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