mRNA_7013 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167918
Unique NamemRNA_7013
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: A0A835YR74_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR74_9STRA)

HSP 1 Score: 645 bits (1665), Expect = 2.650e-234
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1
Query:    1 MTKSNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKWQPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIVDGTGLQPALHWRLVLATDKPEVSFLTPPRVPASGSNMSSSPSCCTSS 948
            MTKSNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKWQPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIVDGTGLQPALHWRLVLATDKPEVSFLTPPRVPASGSNMSSSPSCCTSS
Sbjct:    1 MTKSNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKWQPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIVDGTGLQPALHWRLVLATDKPEVSFLTPPRVPASGSNMSSSPSCCTSS 316          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: A0A835YYL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL6_9STRA)

HSP 1 Score: 361 bits (926), Expect = 1.130e-121
Identity = 189/298 (63.42%), Postives = 214/298 (71.81%), Query Frame = 1
Query:    1 MTKSNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLS--CGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKWQPEWPFVDTSDVPSGTVSVPVTVDDHGTE--------YKTTLTAGHFGCTIVDGTGLQPALHWRLVLATDK 864
            M +SNGFV+T+V AYN+HHHLIIRPDDVWSAIT+QFSY V LHAEKLRP FVDFQG K+L                   MSGEIAKNIKDPSIREWVLPGFTTTT HDKVVG+VVLMAA+Q YF +   L   CGLPSVTLL EL+DWQ +EARAKRL +FDAGDGLM  WS LLAP+L   TL+AQGKPSTDFWSKVCH +   SGP  LSGW+  FAVF+  G+W  +    + +  P    SVP        +        YKTTL+AGHFGCTIVDGTGLQPALH +L LATD+
Sbjct:   45 MAQSNGFVNTVVQAYNQHHHLIIRPDDVWSAITVQFSYSVKLHAEKLRPTFVDFQGTKKLK------------------MSGEIAKNIKDPSIREWVLPGFTTTTGHDKVVGAVVLMAAVQSYFRYAYYLLTVCGLPSVTLLSELADWQALEARAKRLVEFDAGDGLMTTWSKLLAPVLAHLTLTAQGKPSTDFWSKVCHHVASGSGPPDLSGWLAVFAVFDTGGRWVGQRKSFECA--PRCVASVPFRFCSVFADIFLKLRLPYKTTLSAGHFGCTIVDGTGLQPALHRQLTLATDR 322          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: A0A151ZBU5_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZBU5_9MYCE)

HSP 1 Score: 335 bits (860), Expect = 2.280e-111
Identity = 161/296 (54.39%), Postives = 209/296 (70.61%), Query Frame = 1
Query:   10 SNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKW---------------QPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIVDGTGLQPALHWRLVL 852
            +N FV+++  +YNEHHHLIIRPDD+W AI  QFS Y+N++AEKLR  FV FQGKKEL VD  GSL  A Y  L  LMS EIAKNIKD S+++WV+P F+TTT  DK+VGS+ LM+++QKYF FK  L CG+P VTLLG + DW+ I+ RA+RL++FD+GDGLM +W  +L P+L QF  S  G  +  +W+K+CH IGG SGPT+LSGW+T F VFN++ KW               + EW F+DT D+P+G +SVPV V+D+GT YKT L AGH   T +  T +QP L W L +
Sbjct:   50 TNSFVNSVTKSYNEHHHLIIRPDDIWIAIICQFSIYLNVNAEKLRDKFVSFQGKKELEVDCNGSLRNAPYDELTLLMSTEIAKNIKDASVKDWVIPNFSTTTPTDKIVGSIALMSSLQKYFDFKFNLWCGIPRVTLLGTIDDWKSIKTRAERLSEFDSGDGLMTKWLVMLIPVLTQFIESVGGNVNVSWWNKICHYIGGGSGPTWLSGWITVFTVFNDQSKWVGDKKSKHPITSTIEKTEWLFIDTQDIPAGFLSVPVVVNDNGTIYKTKLYAGHMS-TNIQQTSIQPRLDWFLTI 344          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: A0A152A7G1_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A7G1_9MYCE)

HSP 1 Score: 334 bits (856), Expect = 8.890e-111
Identity = 162/293 (55.29%), Postives = 207/293 (70.65%), Query Frame = 1
Query:   10 SNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKW--------------QPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIVDGTGLQPALHWRL 846
            +N FV+++  AYNEHHHLII+PDD+W AI  QFS YVNL+AEKLR  FV FQGKKEL V   GSL  A Y  L  LMS EIAK IKD S+++WV+P F+TTT  DK+VGS+ LM+++QKYF +K RL CG+P VTLLG L DW+ I+ RA+RL++FD+GDGLM +W  +L P+L QF  S  G  +  +W+K+CH IGG SGPT+LSGW+T F VF+++ KW                EW F+DT D+P+G +SVPV VDD+GT+YKT L AGH   T +  T +QP L W L
Sbjct:   50 TNSFVNSVTLAYNEHHHLIIKPDDIWIAIISQFSIYVNLNAEKLRDKFVSFQGKKELEVTCSGSLRDAPYDVLTILMSTEIAKTIKDASVKDWVIPNFSTTTPTDKIVGSIALMSSLQKYFDYKFRLFCGIPRVTLLGTLDDWKSIKTRAERLSEFDSGDGLMTKWLVMLIPVLTQFIESVGGNVNVGWWNKICHYIGGGSGPTWLSGWITVFTVFDDQSKWLGDTKSKQTFKTIETTEWLFIDTQDIPAGYLSVPVVVDDNGTKYKTKLYAGHMS-TNIQQTSIQPRLDWFL 341          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: D2V5A9_NAEGR (Predicted protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2V5A9_NAEGR)

HSP 1 Score: 327 bits (838), Expect = 9.200e-109
Identity = 155/285 (54.39%), Postives = 207/285 (72.63%), Query Frame = 1
Query:   10 SNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKWQPE-----WPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIV-DGTGLQPALHWRL 846
            SN FV + V AY+ HH+L+I+PDDVW AI  QFS YVN  +E+LR  FVDF GKK+L V G G+LF+ADY +L+  M+ +IA+NIKDPS+REWV+P FTTTT++D++VG+VVLMAAM+ YF +K  L C LPSVTLLGE+ DW +I  RA RL +FD  +G M +WS LL P+L+ F  S +G P+ ++W++V H  GG SGP YL GW+T F VF+EKG W+ +     WP +D+ D+P G V+VP+ VDD+GTEYKT + AGH    ++ DG  +QP + W L
Sbjct:    6 SNSFVKSAVQAYSYHHNLVIKPDDVWLAICTQFSNYVNGKSEELRGKFVDFDGKKQLTVYGSGNLFSADYVSLSLDMTNQIAQNIKDPSVREWVMPDFTTTTENDRMVGAVVLMAAMKNYFDYKFSLCCNLPSVTLLGEVEDWVKIRERANRLLEFDTKEGYMEQWSALLFPVLDHFVESIKGNPNKEWWNRVAHISGGGSGPRYLGGWITTFCVFSEKGIWRGDCQPGAWPKIDSQDIPRGYVNVPILVDDNGTEYKTEMFAGHMISNVMEDGKTIQPRVDWAL 290          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: D2W2R6_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W2R6_NAEGR)

HSP 1 Score: 323 bits (827), Expect = 2.950e-106
Identity = 155/306 (50.65%), Postives = 207/306 (67.65%), Query Frame = 1
Query:   10 SNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKW-------------------------QPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIVDGTGLQPALHWRLVL 852
            SN FV + V AY++HHH +I+PDDVW AI  QFS YVN  +EKLR  FVDF GKKELVV G G+L+TA+Y  L+  M+ EIAKNIKDPS+REWV+P FTTTT  D++VG+VVLMAAM+KYF +K  L C LPSVTLLG++ DW +I  RA RL +FD  +  M +WS  L P+L++F  S +G P  ++W++V + +GG SGP+++SGW+T F VF+E GKW                         + EWP +D  ++P G VSVP+TVDD+GT YKT + AGH   ++++   +QP + W L L
Sbjct:   22 SNSFVMSGVQAYSKHHHWVIKPDDVWIAICSQFSNYVNERSEKLRSKFVDFDGKKELVVKGIGTLYTANYEDLSIRMTSEIAKNIKDPSVREWVMPDFTTTTQSDRMVGAVVLMAAMKKYFDYKFELECNLPSVTLLGQVEDWIKIRERANRLLEFDTEEECMKKWSQYLFPVLDKFVESIKGNPDKEWWNRVANFLGGGSGPSFISGWITTFCVFSETGKWLGDQKTEGEVWYEDEDDNEPKEKVREREWPVIDDEEIPRGYVSVPITVDDNGTVYKTEMFAGHIVASVLNQNSIQPRVDWALFL 327          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: D2VY50_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VY50_NAEGR)

HSP 1 Score: 311 bits (796), Expect = 1.230e-101
Identity = 152/291 (52.23%), Postives = 200/291 (68.73%), Query Frame = 1
Query:   10 SNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKWQ----------PEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIVDGTG--LQPALHWRL 846
            +N F+ + + AY+EHH+L+IRPDDVW AI  QF+ YVN  +E+LR  FVDF GKKELVV G G+LFTAD A L   M+ +IAKNIKDPS+R+W++P F+TTT+ +K+VG+VVLM+  + YF +K  L CGLPSVTLLGE  DWQ +  RAKRL +FD    LM +WS +L P+LEQF  SA G P T +W+++ H  GG SGPTY+SGW+  F+ F++ G W+           EWP +D  D+  G VSVPVTVDD+GT YKT L AGH    + + +   + P + W L
Sbjct:   54 NNSFIHSAILAYSEHHNLVIRPDDVWIAIATQFANYVNSKSEELRSKFVDFDGKKELVVVGGGTLFTADCADLTLRMTEQIAKNIKDPSVRDWIMPDFSTTTNLEKMVGAVVLMSTTKNYFDYKYVLRCGLPSVTLLGEKEDWQNLYERAKRLIEFDTKAKLMKKWSDMLLPVLEQFVKSASGNPDTKWWNRIAHVFGGGSGPTYISGWIGVFSAFSDAGVWRGDVKSAKDVKSEWPIMDMQDISRGYVSVPVTVDDNGTIYKTELYAGHMCARLHNNSNDSIIPRVDWAL 344          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: D2VWR3_NAEGR (Predicted protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2VWR3_NAEGR)

HSP 1 Score: 310 bits (793), Expect = 3.180e-101
Identity = 149/296 (50.34%), Postives = 201/296 (67.91%), Query Frame = 1
Query:   13 NGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKW--------------QPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIV-DGTGLQPALHWRLVLA 855
            N FV +   AY+ HH+ +I+PDDVW AI  QFS YVN  +E+LR  FVDF+GKK+L+V G G+L TADYA+L+  M+ +IAKNIKDPS+REW++P FTTTT+ D+++G+VVLMAAM+ YF +   L C LP+VTLLGE+ DW  I  RA RL +FD  +  M +WS LL P+L++F  S +G P  ++W++V H  GG SGP+YLSGW+T+F VF++KG W                EWP +D   +P G VSVP+ VDD+GT Y T + AGH    ++ DG  L+P   W L +A
Sbjct:   47 NSFVMSAAIAYSSHHNWVIKPDDVWLAICTQFSNYVNGRSEELRDKFVDFEGKKQLIVYGGGTLMTADYASLSLDMTTQIAKNIKDPSVREWIMPDFTTTTETDRMIGAVVLMAAMKNYFDYMFSLCCNLPNVTLLGEVEDWVSIRERANRLLEFDTKENCMKKWSKLLFPVLDKFVESIKGNPDKEWWNRVAHHCGGGSGPSYLSGWITSFCVFSDKGHWVGDQKSVNIWGETTTMEWPIIDQDVIPRGYVSVPIVVDDNGTIYDTEMFAGHMSTELLEDGKTLKPRADWALFVA 342          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: A0A7S1A7G3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A7G3_NOCSC)

HSP 1 Score: 311 bits (796), Expect = 5.040e-101
Identity = 149/293 (50.85%), Postives = 195/293 (66.55%), Query Frame = 1
Query:    7 KSNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGE-IAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKWQ------PEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTIV-DGTGLQPALHWRLVLATD 861
              +G V  +V AYN HH L++RPDDVW A+  QFS+YV  +AE+LR  FV+F+GKK L +   G+LFTAD+  +A  M  E I +N++DPS+ EW+LP FTTT + D++V SV +MA +Q YF +K  L CGLP VTLLG   DW+ + A+  RL +FD   G +A W  LLAP+L++F  SA+G+    FW +VC   GG SGPTYLSGW+T FAVF +KG+WQ       EWP VDT D+P G  SVPV VDD+G EYKT + AG F      +GTG+QP   W + +A D
Sbjct:   97 SDSGLVSAVVEAYNAHHELVLRPDDVWQAVLTQFSFYVQANAEQLRDRFVNFEGKKGLAIVAGGTLFTADFGNMAKRMVDEQIIENLRDPSVAEWLLPAFTTTAETDRIVASVSIMATLQAYFDYKFSLLCGLPRVTLLGTPEDWRRLRAKVDRLPEFDVEAGRLASWHSLLAPVLDEFVRSAEGEAQVSFWDRVCSHEGGGSGPTYLSGWITVFAVFTDKGEWQGDRAGGSEWPRVDTQDLPVGVTSVPVLVDDNGKEYKTQMFAGQFAFDGTRNGTGIQPRSDWCIAMAGD 389          
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Match: UPI001D042C09 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D042C09)

HSP 1 Score: 310 bits (793), Expect = 5.520e-101
Identity = 152/298 (51.01%), Postives = 204/298 (68.46%), Query Frame = 1
Query:   10 SNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRIGGASGPTYLSGWVTAFAVFNEKGKW--------------QPEWPFVDTSDVPSGTVSVPVTVDDHGTEYKTTLTAGHFGCTI--VDGTGLQPALHWRLVLA 855
            ++ FV +   +Y+ HHHLIIRPDDVW AI  QFS YVN H+E+LR  FVDF+GKK+L V G G+LFTA+Y  L+  M+ EIAKNIKDPS+REW++P FTTT D D++VG+VVLMA+M++YF ++  L C LP VTLLG++ DW ++  +A RL +FD   G + EWS +L P+L++   SA+GKP   FW+++ H+ GG SGP+YLSGW+T F VF  KG+W              + E+P VD S VP+G VSVP+ V D G +Y+T L AGH  C     +G  LQP + W L L+
Sbjct:   60 AHSFVMSAFQSYSSHHHLIIRPDDVWLAICTQFSLYVNAHSEELRSKFVDFEGKKQLTVIGDGTLFTANYEELSAQMTFEIAKNIKDPSVREWIMPDFTTTKDVDRMVGAVVLMASMKQYFDYQFVLVCNLPKVTLLGQVEDWVKVREKANRLLEFDLKQGYLTEWSKMLFPVLDKLVQSAKGKPDLSFWNRIAHKDGGGSGPSYLSGWITVFCVFTTKGEWVGGKKSVETGSKTVKSEYPIVDMSVVPNGYVSVPMLVVDRGVKYETELFAGHM-CAHNGENGKSLQPRVDWALFLS 356          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167918 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YR74_9STRA2.650e-234100.00Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
A0A835YYL6_9STRA1.130e-12163.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A151ZBU5_9MYCE2.280e-11154.39Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
A0A152A7G1_9MYCE8.890e-11155.29Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
D2V5A9_NAEGR9.200e-10954.39Predicted protein n=2 Tax=Naegleria gruberi TaxID=... [more]
D2W2R6_NAEGR2.950e-10650.65Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
D2VY50_NAEGR1.230e-10152.23Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
D2VWR3_NAEGR3.180e-10150.34Predicted protein n=2 Tax=Naegleria gruberi TaxID=... [more]
A0A7S1A7G3_NOCSC5.040e-10150.85Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
UPI001D042C095.520e-10151.01uncharacterized protein n=1 Tax=Naegleria lovanien... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_54contigContig_54:130196..132721 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167918|e_gw1.54.12.1
DescriptionDomain of unknown function (DUF4419)
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs29GQM@1|root,2RPX4@2759|Eukaryota
Evalue1.51e-109
Seed ortholog5762.XP_002680986.1
Hectar predicted targeting categoryother localisation
TranscriptId168240
TrackFilteredModels1
ProteinId167918
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167918gene_7013Tribonema minus UTEX_B_3156 geneContig_54 130196..132721 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167918Trimin1|167918|e_gw1.54.12.1Tribonema minus UTEX_B_3156 polypeptideContig_54 130196..132721 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7013_3exon_7013_3Tribonema minus UTEX_B_3156 exonContig_54 130196..130471 -
exon_7013_2exon_7013_2Tribonema minus UTEX_B_3156 exonContig_54 131822..132169 -
exon_7013_1exon_7013_1Tribonema minus UTEX_B_3156 exonContig_54 132395..132721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7013CDS_7013Tribonema minus UTEX_B_3156 CDSContig_54 132395..132721 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7013 ID=mRNA_7013|Name=jgi.p|Trimin1|167918|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=951bp|location=Sequence derived from alignment at Contig_54:130196..132721- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACCAAGAGCAACGGCTTCGTGGACACGATAGTGCACGCCTACAACGA
GCATCACCACCTGATCATCCGTCCTGATGATGTGTGGTCTGCCATTACTA
TCCAGTTCAGCTACTATGTCAACCTGCACGCGGAGAAGCTCCGTCCCATC
TTCGTCGACTTCCAGGGGAAGAAAGAGCTGGTGGTTGATGGCTTCGGCTC
GCTATTCACTGCGGACTATGCTGCGCTGGCGACGCTGATGAGTGGCGAGA
TCGCTAAGAACATCAAGGATCCCAGCATCAGGGAATGGGTGCTACCTGGA
TTCACGACAACCACGGACCATGACAAGGTGGTTGGATCCGTGGTGCTCAT
GGCCGCCATGCAAAAGTACTTCAGCTTTAAGATGAGGCTCTCCTGCGGCC
TTCCATCAGTGACACTCCTCGGTGAGCTTTCTGATTGGCAGGAGATAGAG
GCGCGCGCGAAGCGATTGGCCGACTTCGATGCCGGCGACGGCCTGATGGC
CGAATGGTCAGGCCTTCTGGCGCCCATCCTGGAGCAATTCACGCTGTCAG
CGCAGGGCAAGCCCTCCACTGACTTCTGGTCCAAAGTCTGCCACCGCATT
GGCGGTGCGTCCGGGCCTACGTACCTCAGCGGCTGGGTCACGGCCTTTGC
GGTGTTCAATGAGAAGGGGAAGTGGCAGCCGGAGTGGCCATTTGTCGACA
CGAGCGACGTCCCTTCGGGCACAGTTTCGGTGCCCGTGACCGTCGACGAT
CACGGCACGGAGTACAAGACCACGTTGACTGCAGGACACTTTGGCTGCAC
GATAGTGGACGGCACAGGGCTGCAACCTGCGCTGCACTGGCGCCTTGTGC
TTGCGACGGACAAGCCTGAGGTTAGTTTCTTGACACCGCCCAGAGTGCCA
GCCAGCGGAAGCAATATGTCCTCCTCACCTTCGTGTTGCACATCATCTTG
A
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protein sequence of jgi.p|Trimin1|167918

>Trimin1|167918|e_gw1.54.12.1 ID=Trimin1|167918|e_gw1.54.12.1|Name=jgi.p|Trimin1|167918|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=317bp
MTKSNGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPI
FVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPG
FTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIE
ARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPSTDFWSKVCHRI
GGASGPTYLSGWVTAFAVFNEKGKWQPEWPFVDTSDVPSGTVSVPVTVDD
HGTEYKTTLTAGHFGCTIVDGTGLQPALHWRLVLATDKPEVSFLTPPRVP
ASGSNMSSSPSCCTSS*
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mRNA from alignment at Contig_54:130196..132721-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7013 ID=mRNA_7013|Name=jgi.p|Trimin1|167918|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2526bp|location=Sequence derived from alignment at Contig_54:130196..132721- (Tribonema minus UTEX_B_3156 )
ATGACCAAGAGCAACGGCTTCGTGGACACGATAGTGCACGCCTACAACGA GCATCACCACCTGATCATCCGTCCTGATGATGTGTGGTCTGCCATTACTA TCCAGTTCAGCTACTATGTCAACCTGCACGCGGAGAAGCTCCGTCCCATC TTCGTCGACTTCCAGGGGAAGAAAGAGCTGGTGGTTGATGGCTTCGGCTC GCTATTCACTGCGGACTATGCTGCGCTGGCGACGCTGATGAGTGGCGAGA TCGCTAAGAACATCAAGGATCCCAGCATCAGGGAATGGGTGCTACCTGGA TTCACGACAACCACGGACCATGACAAGGTAGGAGTATGCATCATCATGCT ATGATTCCTTGTGCTGTTGTGATGTGCCCTTCAGCAGGTCCTCTACGCCT CAGATGTCGTTGGTTCTGTTCGTCGAGTGTCCGACAGGCTATCAATTGCC TTTGAATTAGTCAGCAGGCCCTGCCGGTGGGGTCATTAACTGTTGCAAGA ACCTGCCAAAGCGCTGAGCCACGATGACCTTGAAATCCACTGCCATGCGC AGGTGGTTGGATCCGTGGTGCTCATGGCCGCCATGCAAAAGTACTTCAGC TTTAAGATGAGGCTCTCCTGCGGCCTTCCATCAGTGACACTCCTCGGTGA GCTTTCTGATTGGCAGGAGATAGAGGCGCGCGCGAAGCGATTGGCCGACT TCGATGCCGGCGACGGCCTGATGGCCGAATGGTCAGGCCTTCTGGCGCCC ATCCTGGAGCAATTCACGCTGTCAGCGCAGGGCAAGCCCTCCACTGACTT CTGGTCCAAAGTCTGCCACCGCATTGGCGGTGCGTCCGGGCCTACGTACC TCAGCGGCTGGGTCACGGCCTTTGCGGTGTTCAATGAGAAGGGGAAGTGG GTGGGGCGCAGCAAAGCCTCGTTGGGGTGAGTGAGACTCTCTGTGACAAG TTGAACTGTCACTACACGTCATGTCTGTGACAACTTGAAGTTGAACATGC TGTCATCCACTACTATATTAGGCTACTCATGATACTGTTGCAGAGGCACG GTGGTTGATAACGCCTCCGGCCAGTAACACGTAGCGCACTTGCTTGCCAA AAGCTCCAATTTGCAATTGTATGGTGTGTGATCATGATGGCATGTGTCAG TGAGCAACTTGAAGGCGCCGCAAGCCTTGGTCACGGGTGGAATGAGTGAC TCGGAGTTCCGAGTTTGACTCTTGCTGCAGATGTGAAACTTCAAGTCGTG ATCATCGCACTTCTGGCCATAGTCAGAGATCCTAGGCGCGGAGTGCTGCT TGGATGTCGTATCGCGCACTTCCCTCGAGGCCTCCCAGAACAGCCAACGG TTCTGAACAGAGTGCTGTACACGCTGGCTTGTGTCACTACAGCTGAAAGC AAAGTTCGATTTAGGGTGGCAGTGAACGTTCTAGATCATGCCGGCTTGAG ATGGAGGCCTAGAGCTGACACAAGTTGTCATACAACCCATCTGTTGTGCC TGTAGCTGGTTCATTCTGGTGATATCTGGTCCATTGCTACACCGCAAGCG CCGGGTGCTACGCACCCGCAAAGCTCCTGACCGTGCCCCACTCGACCGTT TACATGACTATGGCGCGTGCCGCTGGCAGGGTTAGGGTTTGGTTTAGGAT TAGAGTCAGGGCTACTAGCCTACTAGACGAAGGGTTAGGGTCACTGACGG TTGCTTCCACTCCGCCCTCAGGTGCGCGAGTCTTCGCACGACAGGGTGAG CGCGTCCAGCTTAGGGTAAGGTTTAGGGTAAGGGTTAGGGCTAGGGTTAG GTTTAGGGCCGCCGTCGCCGTCGCGACGAGGCCCGACTGTGTGACAGGCC ATCGTAGCGCCACAAACGATCATTTTGGCCTGAGGATGTTGTCTATAATG GTTATGGTCAGGTTGATCGTGTTGAATTCGATGGGCCGCCTGCTGGGTCT GGTCAAGGTGTTCACGCTTTTACTGTTTATGTTTACAAAGCTGTACATCA GCTGCGTTCACGAACCCTCATGTGACATTCACCGACAAGCTGCTGGTGCT GCTGTGCAGATGCATCGTGATGATCCTGCCCCTACTTGCTGCACCTTGTT GGCCCGCATGTGAGCTTGCTGTCAAGTTGCTGACATGTATCCGTCTGGTC GACTGTCGTGCCAATGTTGCTGTCGCGTGCCAGGTCGTACCTTTTCAAAG ATAGATGGGCGGATGCTGCACCGGCAGCCACGCATGGTACCGCTGAACAG CAGCCGGAGTGGCCATTTGTCGACACGAGCGACGTCCCTTCGGGCACAGT TTCGGTGCCCGTGACCGTCGACGATCACGGCACGGAGTACAAGACCACGT TGACTGCAGGACACTTTGGCTGCACGATAGTGGACGGCACAGGGCTGCAA CCTGCGCTGCACTGGCGCCTTGTGCTTGCGACGGACAAGCCTGAGGTTAG TTTCTTGACACCGCCCAGAGTGCCAGCCAGCGGAAGCAATATGTCCTCCT CACCTTCGTGTTGCACATCATCTTGA
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Coding sequence (CDS) from alignment at Contig_54:130196..132721-

>mRNA_7013 ID=mRNA_7013|Name=jgi.p|Trimin1|167918|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=951bp|location=Sequence derived from alignment at Contig_54:130196..132721- (Tribonema minus UTEX_B_3156 )
ATGACCAAGAGCAACGGCTTCGTGGACACGATAGTGCACGCCTACAACGA
GCATCACCACCTGATCATCCGTCCTGATGATGTGTGGTCTGCCATTACTA
TCCAGTTCAGCTACTATGTCAACCTGCACGCGGAGAAGCTCCGTCCCATC
TTCGTCGACTTCCAGGGGAAGAAAGAGCTGGTGGTTGATGGCTTCGGCTC
GCTATTCACTGCGGACTATGCTGCGCTGGCGACGCTGATGAGTGGCGAGA
TCGCTAAGAACATCAAGGATCCCAGCATCAGGGAATGGGTGCTACCTGGA
TTCACGACAACCACGGACCATGACAAGGTGGTTGGATCCGTGGTGCTCAT
GGCCGCCATGCAAAAGTACTTCAGCTTTAAGATGAGGCTCTCCTGCGGCC
TTCCATCAGTGACACTCCTCGGTGAGCTTTCTGATTGGCAGGAGATAGAG
GCGCGCGCGAAGCGATTGGCCGACTTCGATGCCGGCGACGGCCTGATGGC
CGAATGGTCAGGCCTTCTGGCGCCCATCCTGGAGCAATTCACGCTGTCAG
CGCAGGGCAAGCCCTCCACTGACTTCTGGTCCAAAGTCTGCCACCGCATT
GGCGGTGCGTCCGGGCCTACGTACCTCAGCGGCTGGGTCACGGCCTTTGC
GGTGTTCAATGAGAAGGGGAAGTGGCAGCCGGAGTGGCCATTTGTCGACA
CGAGCGACGTCCCTTCGGGCACAGTTTCGGTGCCCGTGACCGTCGACGAT
CACGGCACGGAGTACAAGACCACGTTGACTGCAGGACACTTTGGCTGCAC
GATAGTGGACGGCACAGGGCTGCAACCTGCGCTGCACTGGCGCCTTGTGC
TTGCGACGGACAAGCCTGAGGTTAGTTTCTTGACACCGCCCAGAGTGCCA
GCCAGCGGAAGCAATATGTCCTCCTCACCTTCGTGTTGCACATCATCTTG
A
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