mRNA_6990 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|52072
Unique NamemRNA_6990
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A835Z7P2_9STRA (Ubiquitin-protein ligase 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P2_9STRA)

HSP 1 Score: 386 bits (991), Expect = 2.900e-134
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1
Query:    1 GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT 573
            GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT
Sbjct:    1 GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT 191          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 1.500e-73
Identity = 127/186 (68.28%), Postives = 150/186 (80.65%), Query Frame = 1
Query:   13 LSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENL 570
            LSP  RR AV AVE+  LT  +RCLE LY G+A V+P ELL +FTA EAE LFCGVPEVDV+LL+R TEYEGV+PTDPH+ +FW ALR M   DR + V FCSGR+RLP SAA+F MNF LTAPH   ++ PD+YLP+AQTCFFSLALP+YSS+E C  KL YAI+NA+LMDADY++RSADGWENL
Sbjct: 8373 LSPRQRRLAVRAVEQLRLTSGSRCLESLYQGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDPHVGYFWQALRRMGREDRSSFVNFCSGRSRLPGSAAEFAMNFKLTAPH-RDYDDPDEYLPIAQTCFFSLALPKYSSVEVCLEKLRYAIKNADLMDADYLVRSADGWENL 8557          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 7.020e-73
Identity = 125/181 (69.06%), Postives = 148/181 (81.77%), Query Frame = 1
Query:   28 RRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENL 570
            RRRAV AVE+  LT  +RCLE LY G+A V+P ELL +FTA EAE LFCGVPEVDV+LL+R TEYEGV+PTDPH+ +FW ALR M   DR + V FCSGR+RLP SAA+F MNF LTAPH   ++ PD+YLP+AQTCFFSLALP+YSS+E C  KL YAI+NA+LMDADY++RSADGWENL
Sbjct: 7678 RRRAVRAVEQLRLTSGSRCLESLYQGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDPHVGYFWQALRRMGREDRSSFVNFCSGRSRLPGSAAEFAMNFKLTAPH-RDYDDPDEYLPIAQTCFFSLALPKYSSVEVCLEKLRYAIKNADLMDADYLVRSADGWENL 7857          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A7S2CPC5_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPC5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.430e-48
Identity = 92/174 (52.87%), Postives = 113/174 (64.94%), Query Frame = 1
Query:   40 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 561
            V AV    L   A  L  L  G+A+V+P EL  +FTAEE E L CGV EVDVELL+  TEYE V  ++PHI  FW  L  M   +R  L+ F   R+R+P SA DFPMNF L  P   + + PD +LP AQTCFFSL+LP+Y+S ET RAKLL+AI N+  MDAD  + SA+GW
Sbjct:   47 VEAVAACRLRESAPLLRSLRNGLASVLPVELFPVFTAEELEVLVCGVREVDVELLKSCTEYEEVDESEPHIGFFWDVLEEMRPEERTQLLKFVWARSRMPNSAKDFPMNFKLQGPPTGSQDDPDSWLPHAQTCFFSLSLPKYTSKETLRAKLLFAINNSPNMDADVRLHSAEGW 220          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: I2CP01_NANGC (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP01_NANGC)

HSP 1 Score: 173 bits (438), Expect = 3.590e-46
Identity = 94/175 (53.71%), Postives = 112/175 (64.00%), Query Frame = 1
Query:   40 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYE-GVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 561
            V  VE   L   A  +     G+AAVVP ELL LFT EE E+L CGV EVDVELL + T+YE GV P  PH++ FW  L  M A +R   + F   R+R+P SA DFPMNF L  P     E+PDDYLP AQTCFFSL+LP+YSS E  R KLL AI N+  MDAD  + +A+GW
Sbjct:  450 VRLVETVRLKESAAMMGAFQEGMAAVVPQELLPLFTEEEVEQLICGVREVDVELLRKCTDYEDGVDPDAPHVKAFWEVLEEMQAEERTDFLRFAWARSRMPASAKDFPMNFRLQGPQGGAKEKPDDYLPHAQTCFFSLSLPQYSSKEILREKLLLAISNSPNMDADVRLHTAEGW 624          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: W7THG0_9STRA (Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THG0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.450e-45
Identity = 94/175 (53.71%), Postives = 113/175 (64.57%), Query Frame = 1
Query:   40 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYE-GVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 561
            V  VE   L   A  +     G+AAVVP ELL LFT EE E+L CGV EVDVELL++ T+YE GV P  PH++ FW  L  M A +R   + F   R+R+P SA DFPMNF L  P     E+PDDYLP AQTCFFSL+LP+YSS E  R KLL AI N+  MDAD  + +A+GW
Sbjct: 1592 VRLVETVRLKESAAMMGAFQEGMAAVVPQELLPLFTEEEVEQLICGVREVDVELLKKCTDYEDGVDPDAPHVKAFWEVLEEMQAEERTDFLRFAWARSRMPASAKDFPMNFRLQGPQGGAKEKPDDYLPHAQTCFFSLSLPQYSSKEILREKLLLAISNSPNMDADVRLHTAEGW 1766          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A4D9CXX4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXX4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.670e-45
Identity = 94/175 (53.71%), Postives = 113/175 (64.57%), Query Frame = 1
Query:   40 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYE-GVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 561
            V  VE   L   A  +     G+AAVVP ELL LFT EE E+L CGV EVDVELL++ T+YE GV P  PH++ FW  L  M A +R   + F   R+R+P SA DFPMNF L  P     E+PDDYLP AQTCFFSL+LP+YSS E  R KLL AI N+  MDAD  + +A+GW
Sbjct: 5677 VRLVETVRLKESAAMMGAFQEGMAAVVPQELLPLFTEEEVEQLICGVREVDVELLKKCTDYEDGVDPDAPHVKAFWEVLEEMQAEERTDFLRFAWARSRMPASAKDFPMNFRLQGPQGGAKEKPDDYLPHAQTCFFSLSLPQYSSKEILREKLLLAISNSPNMDADVRLHTAEGW 5851          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A7S2D1C9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1C9_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.950e-44
Identity = 90/186 (48.39%), Postives = 108/186 (58.06%), Query Frame = 1
Query:   13 LSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEY----EGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADG 558
            LSPA R   +  VE R L      L     G+   VPA  L LFT EE E L CG PE+D+ELL++VTEY    EGV    PHIQ+FW AL  MD   R   + F S R+RLP S  +FPMNF +  P P     PD +LP +QTCFF+L+LP YSS + C  +LLYAI NA  MD D+  R   G
Sbjct:  268 LSPANRAEFIRQVEHRHLEAMNPVLTAFLTGLGTAVPAPFLPLFTPEELEVLLCGKPEIDIELLKKVTEYDTATEGVTEKAPHIQYFWAALEQMDQAQRANFINFVSARSRLPNSVDEFPMNFKIQGPKPGAKNEPDKHLPSSQTCFFTLSLPFYSSQQVCYQRLLYAIENATTMDDDFTNREEWG 453          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A3L6VV80_9STRA (HECT domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VV80_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.730e-43
Identity = 85/160 (53.12%), Postives = 104/160 (65.00%), Query Frame = 1
Query:   85 LEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHP-ATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 561
            L  L  G++AV+P E+  LFTA+E E L CG  EVDV LL++ TEYE V PT  HI  FW  L      DR   +LF   R+R+P SA DFPMNF + APH      +PD YLP AQTCFFSL+LP YS+    +AKLLYAIRN+  MDAD  + +A+GW
Sbjct:  152 LAALREGLSAVIPMEIAGLFTAKELETLVCGRREVDVALLKQCTEYEDVDPTSAHIVVFWQVLEEFPPDDRTLFLLFVWARSRMPNSAKDFPMNFKIQAPHDQGARSQPDLYLPHAQTCFFSLSLPAYSTKAILKAKLLYAIRNSPNMDADVRLHNAEGW 311          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A662X8D1_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8D1_9STRA)

HSP 1 Score: 164 bits (414), Expect = 6.100e-43
Identity = 92/176 (52.27%), Postives = 114/176 (64.77%), Query Frame = 1
Query:   40 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEY-EGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPH-PATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 561
            V  VE+  LT  ++ L  L  G+AAV+P EL  LFT  E E L CG  EVDV+LL + TEY EG   T PH+Q+FW  LR M + +R + + F   R+R+P SA DFPMNF L A H P     PD YLP AQTCFF+L LP Y+S E  RAKLLYAI+N+  MDAD  + +A+GW
Sbjct:  414 VQLVEKTRLTESSQQLAALKDGLAAVLPMELAPLFTPRELEVLICGRREVDVDLLRQCTEYSEGADETMPHVQNFWDVLREMTSEERTSFLRFVWARSRMPNSAKDFPMNFKLQAAHDPGAMGEPDLYLPHAQTCFFALRLPTYTSKEVLRAKLLYAIQNSPNMDADVRLHNAEGW 589          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7P2_9STRA2.900e-134100.00Ubiquitin-protein ligase 1 (Fragment) n=1 Tax=Trib... [more]
A0A6H5KT07_9PHAE1.500e-7368.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCZ5_ECTSI7.020e-7369.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CPC5_9STRA1.430e-4852.87HECT-type E3 ubiquitin transferase n=1 Tax=Florenc... [more]
I2CP01_NANGC3.590e-4653.71E3 ubiquitin-protein ligase HERC2 n=1 Tax=Nannochl... [more]
W7THG0_9STRA2.450e-4553.71Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana... [more]
A0A4D9CXX4_9STRA2.670e-4553.71Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2D1C9_9STRA3.950e-4448.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3L6VV80_9STRA2.730e-4353.13HECT domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A662X8D1_9STRA6.100e-4352.27HECT domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:1022723..1024687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|52072|CE52071_63
BRITEko00000,ko00001,ko01000,ko04121
KEGG Pathwayko04120,map04120
KEGG koko:K10614
EC2.3.2.26
Descriptionguanyl-nucleotide exchange factor activity
COG categoryDZ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5184@1|root,KOG1426@2759|Eukaryota
Evalue4.52e-75
Seed ortholog2880.D8LCZ5
Hectar predicted targeting categoryother localisation
TranscriptId52394
TrackFilteredModels1
ProteinId52072
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|52072gene_6990Tribonema minus UTEX_B_3156 geneContig_27 1022723..1024687 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6990_3exon_6990_3Tribonema minus UTEX_B_3156 exonContig_27 1022723..1023249 -
exon_6990_2exon_6990_2Tribonema minus UTEX_B_3156 exonContig_27 1023678..1023797 -
exon_6990_1exon_6990_1Tribonema minus UTEX_B_3156 exonContig_27 1024502..1024687 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6990UTR3_6990Tribonema minus UTEX_B_3156 three_prime_UTRContig_27 1022723..1022979 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6990CDS_6990Tribonema minus UTEX_B_3156 CDSContig_27 1024502..1024687 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|52072Trimin1|52072|CE52071_63Tribonema minus UTEX_B_3156 polypeptideContig_27 1022980..1024687 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6990 ID=mRNA_6990|Name=jgi.p|Trimin1|52072|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=833bp|location=Sequence derived from alignment at Contig_27:1022723..1024687- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCGACGGAGGGCTATCGCCGGCGGCGCGGCGGCGCGCGGTGGCGGCGGT
TGAGCGGCGCTGCCTGACGCGACATGCGCGGTGTTTGGAGGATCTGTATG
CAGGCGTGGCGGCGGTTGTGCCGGCGGAGCTGCTGGCGCTGTTCACCGCG
GAGGAGGCGGAGGAGCTGTTCTGCGGCGTGCCGGAGGTGGACGTGGAGCT
CCTGGAGCGCGTGACGGAATACGAGGGCGTGCAGCCCACCGATCCGCACA
TACAGCACTTCTGGACGGCGCTGCGCGGCATGGACGCGCGCGACCGCGGA
GCGCTGGTCCTCTTCTGCAGCGGCCGCGCGCGCCTGCCGCCGAGCGCTGC
CGACTTCCCCATGAACTTCACGCTCACGGCGCCGCACCCCGCGACGCACG
AGCGCCCCGACGACTACCTGCCGCTCGCGCAGACGTGCTTCTTCTCGCTC
GCGCTGCCGCGCTACTCGAGCCTCGAGACGTGCCGCGCCAAGCTGCTGTA
CGCGATCCGCAACGCAAACCTCATGGACGCGGACTACGTCATGCGCTCGG
CGGACGGCTGGGAGAACCTGACGTGAATTTTGGGGGGGATACCTAGGGGG
GCAAGGTAGGGTAGGAAATGTTACAGGTTGCCCCCCCCTCCCCCCTCTGA
ATGCTGCGCCTTCGTCAAATGCGTGGGAGCTTGTGCCGCGGAATTCAGAC
GCGGCACGTGCGGCCGTGCGCCACGCATGTTCGGTGCGCTGCGGCGCACT
TTGCGCTGCTGTATTTATCGTGCTCCCATCGAGTCGCTACGAGCGCTCCT
AGGCTTGCACATCTGAATGCACTACGTTCTGTC
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protein sequence of jgi.p|Trimin1|52072

>Trimin1|52072|CE52071_63 ID=Trimin1|52072|CE52071_63|Name=jgi.p|Trimin1|52072|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=192bp
GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTA
EEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRG
ALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSL
ALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT*
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mRNA from alignment at Contig_27:1022723..1024687-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6990 ID=mRNA_6990|Name=jgi.p|Trimin1|52072|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1965bp|location=Sequence derived from alignment at Contig_27:1022723..1024687- (Tribonema minus UTEX_B_3156 )
GGCGACGGAGGGCTATCGCCGGCGGCGCGGCGGCGCGCGGTGGCGGCGGT TGAGCGGCGCTGCCTGACGCGACATGCGCGGTGTTTGGAGGATCTGTATG CAGGCGTGGCGGCGGTTGTGCCGGCGGAGCTGCTGGCGCTGTTCACCGCG GAGGAGGCGGAGGAGCTGTTCTGCGGCGTGCCGGAGGTGCGTCACACTTG AAGTTGTATGTGTAGTGCAAGGAAGTGCTGTCGTCGTGTCCCAGCGCTTT GCTAGCATATGCTGCGGCATGCCACAGGTGTTCAGGCACCACACGCATTG TTGCAAGTTGGTTGCTACGTATCGCGGTGCAACGGCGTGCCGGCACGTGG TGATTCAGCCCTTGTATGCTCCAGACAGCTCATACTACGTGTGCTTGCGA GCCCTTGCTGCTGTCGCAGGCGGCAAAACACTAACCAGCTTGCATCATGT CTCATGAAGAGATTCGAAAGACAGCAGCGTCTGCGCTGGTATATCGCCAG GACTGCCACACGAATTCAATCATGCCTCTATGTTGACAGCATGCGGCGAC AGCTGTCCAAAGTCACATGTGTTGGTCACATGGTCCACAATGAGCTCTTA GAAGTTGACATGCCATTTCGGACAGCAACCATCACTGAAGTAAGTGACAC CTGAACCATACGCTCAGCAAGTCTGTGCCAGCCCTGCTTGCGCTTCAGCA AAATGCTTGTAGCCTGGTGCTCGCCTGCGACATGGCACGCGCACGTCACC ACCATGCCACTCACCCATGGCCACACTGCATGTGCAGCCCACGTGTACAT ACACATCTGTATGTTCACTGCGAAGTTGGAAGCTGAAAGGCTACCAAGTT GAAAGCTGAAGTGCTACCTGTGACGCTCACGCTCGCGCAGGTGGACGTGG AGCTCCTGGAGCGCGTGACGGAATACGAGGGCGTGCAGCCCACCGATCCG CACATACAGCACTTCTGGACGGCGCTGCGCGGCATGGACGCGCGCGACCG CGGAGCGCTGGTGAGACCCTGGCATCTGAATCTGACCCTAGTGCAAAGTG CCCTATTCCTAACTTCCGAAGGTTTGCGTTGGAGTGCTCAAGAGCAGCTT GATTTTGTTTGCACGCGCTGCTGCCCACCAGTGGGTGTTCACGCAGTGCT GCAGTGTCTCAAGGCACTCTGAGCAGCCTTGAGCAACTTCACGGTAGTTT TTTTGTCATTAGCATGTTGAGCCGCGGCAGGTGTTGTTGCGCCCTTCTCC AGCCTCGGCATGGCCAGTGACGCTCAATCGATTCACGTTCACAGATTCGC ACCGTCATCTTGGCTGACGTTGATAGAGGCGGTCCTGCAACTGCGGGGAC TCACAGGAGGTCATTCAACACATTGCGCTGCCACGGTCGTAGTGTTGCTG ACGCTGCTGCCGCCATCGCCGCCGCTCTACGCGCGCAGGTCCTCTTCTGC AGCGGCCGCGCGCGCCTGCCGCCGAGCGCTGCCGACTTCCCCATGAACTT CACGCTCACGGCGCCGCACCCCGCGACGCACGAGCGCCCCGACGACTACC TGCCGCTCGCGCAGACGTGCTTCTTCTCGCTCGCGCTGCCGCGCTACTCG AGCCTCGAGACGTGCCGCGCCAAGCTGCTGTACGCGATCCGCAACGCAAA CCTCATGGACGCGGACTACGTCATGCGCTCGGCGGACGGCTGGGAGAACC TGACGTGAATTTTGGGGGGGATACCTAGGGGGGCAAGGTAGGGTAGGAAA TGTTACAGGTTGCCCCCCCCTCCCCCCTCTGAATGCTGCGCCTTCGTCAA ATGCGTGGGAGCTTGTGCCGCGGAATTCAGACGCGGCACGTGCGGCCGTG CGCCACGCATGTTCGGTGCGCTGCGGCGCACTTTGCGCTGCTGTATTTAT CGTGCTCCCATCGAGTCGCTACGAGCGCTCCTAGGCTTGCACATCTGAAT GCACTACGTTCTGTC
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Coding sequence (CDS) from alignment at Contig_27:1022723..1024687-

>mRNA_6990 ID=mRNA_6990|Name=jgi.p|Trimin1|52072|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=576bp|location=Sequence derived from alignment at Contig_27:1022723..1024687- (Tribonema minus UTEX_B_3156 )
GGCGACGGAGGGCTATCGCCGGCGGCGCGGCGGCGCGCGGTGGCGGCGGT
TGAGCGGCGCTGCCTGACGCGACATGCGCGGTGTTTGGAGGATCTGTATG
CAGGCGTGGCGGCGGTTGTGCCGGCGGAGCTGCTGGCGCTGTTCACCGCG
GAGGAGGCGGAGGAGCTGTTCTGCGGCGTGCCGGAGGTGGACGTGGAGCT
CCTGGAGCGCGTGACGGAATACGAGGGCGTGCAGCCCACCGATCCGCACA
TACAGCACTTCTGGACGGCGCTGCGCGGCATGGACGCGCGCGACCGCGGA
GCGCTGGTCCTCTTCTGCAGCGGCCGCGCGCGCCTGCCGCCGAGCGCTGC
CGACTTCCCCATGAACTTCACGCTCACGGCGCCGCACCCCGCGACGCACG
AGCGCCCCGACGACTACCTGCCGCTCGCGCAGACGTGCTTCTTCTCGCTC
GCGCTGCCGCGCTACTCGAGCCTCGAGACGTGCCGCGCCAAGCTGCTGTA
CGCGATCCGCAACGCAAACCTCATGGACGCGGACTACGTCATGCGCTCGG
CGGACGGCTGGGAGAACCTGACGTGA
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