mRNA_6970 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163767
Unique NamemRNA_6970
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A835YZT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZT1_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.730e-40
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 1 
Query:    1 RWKEALGALRAARAAGTRLNVFVFGAAITAMARSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYCNGVCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNAVMDACRRGSDGGAAALQQLXXXXXXXXXXXXXXXXXXXXXXGGGDAQRWQRGMGLLEXXXXXXXXXXXXXXXXXXXXXAAHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGVVREAQRLQEVLDELRAARQQRDADADAYRRGGDGARQALRSGAAEQ 1218
            RWKEALGALRAARAAGTRLNVFVFGAAITAMARSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYCNGVCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNAVMDACRRGSDGGAAALQQLXXXXXXXXXXXXXXXXXXXXXXGGGDAQRWQRGMGLLEXXXXXXXXXXXXXXXXXXXXXAAHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGVVREAQRLQEVLDELRAARQQRDADADAYRRGGDGARQALRSGAAEQ
Sbjct:    1 RWKEALGALRAARAAGTRLNVFVFGAAITAMARSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYCNGVCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNAVMDACRRGSDGGAAALQQLXXXXXXXXXXXXXXXXXXXXXXGGGDAQRWQRGMGLLEXXXXXXXXXXXXXXXXXXXXXAAHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGVVREAQRLQEVLDELRAARQQRDADADAYRRGGDGARQALRSGAAEQ 406
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BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A835Z1Y6_9STRA (Proton_antipo_M domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y6_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.770e-49
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALLMLTCRDGVNRTHLISSQACAKRFSCCAVKPAPFQARRPLSSRTQVCA 228
            GAVGGSAQLGLHTWLPDAVEGPTPVSALLMLTCRDGVNRTHLISSQACAKRFSCCAVKPAPFQARRPLSSRTQVCA
Sbjct:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALLMLTCRDGVNRTHLISSQACAKRFSCCAVKPAPFQARRPLSSRTQVCA 76
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BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A3D3IWA2_9PROT (NADH-quinone oxidoreductase subunit L (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D3IWA2_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 6.400e-9
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GAVG SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:   53 GAVGKSAQLGLHTWLPDAMEGPTPVSALI 81
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A227JNU6_9CAUL (Proton_antipo_M domain-containing protein n=1 Tax=Phenylobacterium zucineum TaxID=284016 RepID=A0A227JNU6_9CAUL)

HSP 1 Score: 55.5 bits (132), Expect = 8.870e-9
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GA G SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:    5 GATGKSAQLGLHTWLPDAMEGPTPVSALI 33
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: F8QZH8_9STRA (NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Navicula minima TaxID=97222 RepID=F8QZH8_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.560e-8
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GAVG SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:   39 GAVGKSAQLGLHTWLPDAMEGPTPVSALI 67
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A5J9ULM2_9POAL (Proton_antipo_M domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9ULM2_9POAL)

HSP 1 Score: 56.2 bits (134), Expect = 3.470e-8
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GAVG SAQ+GLHTWLPDA+EGPTPVSAL+
Sbjct:   54 GAVGKSAQIGLHTWLPDAMEGPTPVSALI 82
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A6C0MB77_9EUKA (NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Acanthamoeba sp. TaxID=5756 RepID=A0A6C0MB77_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 4.260e-8
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GAVG SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:   55 GAVGKSAQLGLHTWLPDAMEGPTPVSALI 83
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A6C0M8U2_9EUKA (NADH dehydrogenase subunit 5 (Fragment) n=3 Tax=Acanthamoeba TaxID=5754 RepID=A0A6C0M8U2_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 4.320e-8
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GAVG SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:   56 GAVGKSAQLGLHTWLPDAMEGPTPVSALI 84
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A6C0MA52_9EUKA (NADH dehydrogenase subunit 5 (Fragment) n=13 Tax=Acanthamoeba TaxID=5754 RepID=A0A6C0MA52_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 6.040e-8
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GA+G SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:   56 GAIGKSAQLGLHTWLPDAMEGPTPVSALI 84
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A6C0M9J9_9EUKA (NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Acanthamoeba hatchetti TaxID=65660 RepID=A0A6C0M9J9_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 6.040e-8
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GA+G SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:   56 GAIGKSAQLGLHTWLPDAMEGPTPVSALI 84
[Close]
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Match: A0A6C0MBW1_9EUKA (NADH dehydrogenase subunit 5 (Fragment) n=2 Tax=Acanthamoeba TaxID=5754 RepID=A0A6C0MBW1_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 6.040e-8
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 1 
Query:    1 GAVGGSAQLGLHTWLPDAVEGPTPVSALL 87
            GA+G SAQLGLHTWLPDA+EGPTPVSAL+
Sbjct:   56 GAIGKSAQLGLHTWLPDAMEGPTPVSALI 84
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163767 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YZT1_9STRA1.730e-40100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|163767 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1Y6_9STRA3.770e-49100.00Proton_antipo_M domain-containing protein n=1 Tax=... [more]
A0A3D3IWA2_9PROT6.400e-989.66NADH-quinone oxidoreductase subunit L (Fragment) n... [more]
A0A227JNU6_9CAUL8.870e-986.21Proton_antipo_M domain-containing protein n=1 Tax=... [more]
F8QZH8_9STRA2.560e-889.66NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Na... [more]
A0A5J9ULM2_9POAL3.470e-886.21Proton_antipo_M domain-containing protein (Fragmen... [more]
A0A6C0MB77_9EUKA4.260e-889.66NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Ac... [more]
A0A6C0M8U2_9EUKA4.320e-889.66NADH dehydrogenase subunit 5 (Fragment) n=3 Tax=Ac... [more]
A0A6C0MA52_9EUKA6.040e-886.21NADH dehydrogenase subunit 5 (Fragment) n=13 Tax=A... [more]
A0A6C0M9J9_9EUKA6.040e-886.21NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Ac... [more]
A0A6C0MBW1_9EUKA6.040e-886.21NADH dehydrogenase subunit 5 (Fragment) n=2 Tax=Ac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:829024..834591 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163767|e_gw1.27.195.1
Hectar predicted targeting categorymitochondrion
TranscriptId164089
TrackFilteredModels1
ProteinId163767
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163767gene_6970Tribonema minus UTEX_B_3156 geneContig_27 829024..834591 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163767Trimin1|163767|e_gw1.27.195.1Tribonema minus UTEX_B_3156 polypeptideContig_27 829024..834591 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6970_1exon_6970_1Tribonema minus UTEX_B_3156 exonContig_27 829024..829245 +
exon_6970_2exon_6970_2Tribonema minus UTEX_B_3156 exonContig_27 829891..830078 +
exon_6970_3exon_6970_3Tribonema minus UTEX_B_3156 exonContig_27 830625..830715 +
exon_6970_4exon_6970_4Tribonema minus UTEX_B_3156 exonContig_27 831598..831812 +
exon_6970_5exon_6970_5Tribonema minus UTEX_B_3156 exonContig_27 832669..832905 +
exon_6970_6exon_6970_6Tribonema minus UTEX_B_3156 exonContig_27 834261..834591 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6970CDS_6970Tribonema minus UTEX_B_3156 CDSContig_27 829024..829245 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6970 ID=mRNA_6970|Name=jgi.p|Trimin1|163767|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1284bp|location=Sequence derived from alignment at Contig_27:829024..834591+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AGGTGGAAGGAGGCGCTGGGCGCGCTGCGCGCCGCGCGCGCCGCCGGCAC
GCGCCTCAACGTCTTCGTCTTCGGCGCGGCCATCACGGCGATGGCGCGCA
GCGGGCGCTGGTCCGAGGGCGTCGCGCTGCTGGACGACATGGCTGCGGAC
GGCCTGCAGGCGAACGTCGTCGCGTACAACGCGGGCATCGCGGCATGCGC
GCGCGCCGGGCGGTGGCAGGAGGCGGTGGCGCTCCTAGAGCGCATGGACG
CGGCCGGCGTCGCGCCCGACAAGTACTCGTTCGCGTCCGCCATGAACGCG
TGCGCGCGCGCGGGCCACGCGGAGCGCTGCCTCGAGCTGCTGCGCGAGAT
GGCGCGGCGCGGCGTCGTGCCGGACGAGGTCGGCTACGGCACCGCCATCG
CCGCCTGCAGCGCTGGCGGACAGTGGGAGCAGGCGGTGAAGCTGCTGGAG
GAGATGCGCAACATCGGCGTGCTGCCCAACGAGGCGAGTTACTGCAACGG
CGTGTGCTACAACGCCGCCATCAACGCGTGCACCAAGGCGGCGGCGTGGG
AGGAGGCGAACCGCCTGCTGGAGGAGATGTCGGCGCGCGGCCTCGCGCCC
AACGAGCGCAGCTACAACGCCGTCATGGACGCGTGCCGCCGCGGCAGCGA
CGGCGGCGCCGCCGCGCTGCAGCAGCTCGACCGCATGAAGGCGCGCGGCG
TGGCGCCGTCGCTGAGGGCGTACACGGCGGCGATAGAGGCGTGCGGCGGC
GGCGACGCGCAGCGCTGGCAGCGCGGCATGGGGCTGCTGGAGGAGATGCG
CAAGGCGGGCGCAGCGCCGGATACGCGCGCGTACATGGCGGCGATAGGCG
CGTGCGCGGCGCACCGCAAGTGGCGCCGCGCCGTGCAGCTGCTCGAGGAG
ATGCGCGAGGCGGGCGTGCCGCCGGACCGGCCGTGCTACGCGCGCGCCAT
CCAGGCGTGCGCCACGCAGTCCAAGTGGGAGCGCGCCGTCTCCATCCTCG
TGGACATGGCGGACCGCGGCGTCCCCCCCGACGAGGGCTGCTACGTCGAG
GCGATCCGCGCGTGCCGCGGCGCCGGCGTTGTGCGCGAGGCGCAGCGCCT
GCAGGAGGTCCTGGACGAGCTGCGCGCTGCGCGGCAGCAGCGCGACGCCG
ACGCGGATGCGTACCGGCGCGGCGGCGACGGCGCGCGCCAGGCGCTCCGC
AGCGGCGCCGCGGAGCAGGAGGAAGAGGGCGCGCCCGCGCTGGCGACTGC
GGCGGCGGCGGCTGCGGCGGGCGGCGCTGCCTGA
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protein sequence of jgi.p|Trimin1|163767

>Trimin1|163767|e_gw1.27.195.1 ID=Trimin1|163767|e_gw1.27.195.1|Name=jgi.p|Trimin1|163767|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=428bp
RWKEALGALRAARAAGTRLNVFVFGAAITAMARSGRWSEGVALLDDMAAD
GLQANVVAYNAGIAACARAGRWQEAVALLERMDAAGVAPDKYSFASAMNA
CARAGHAERCLELLREMARRGVVPDEVGYGTAIAACSAGGQWEQAVKLLE
EMRNIGVLPNEASYCNGVCYNAAINACTKAAAWEEANRLLEEMSARGLAP
NERSYNAVMDACRRGSDGGAAALQQLDRMKARGVAPSLRAYTAAIEACGG
GDAQRWQRGMGLLEEMRKAGAAPDTRAYMAAIGACAAHRKWRRAVQLLEE
MREAGVPPDRPCYARAIQACATQSKWERAVSILVDMADRGVPPDEGCYVE
AIRACRGAGVVREAQRLQEVLDELRAARQQRDADADAYRRGGDGARQALR
SGAAEQEEEGAPALATAAAAAAAGGAA*
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mRNA from alignment at Contig_27:829024..834591+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6970 ID=mRNA_6970|Name=jgi.p|Trimin1|163767|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5568bp|location=Sequence derived from alignment at Contig_27:829024..834591+ (Tribonema minus UTEX_B_3156 )
AGGTGGAAGGAGGCGCTGGGCGCGCTGCGCGCCGCGCGCGCCGCCGGCAC
GCGCCTCAACGTCTTCGTCTTCGGCGCGGCCATCACGGCGATGGCGCGCA
GCGGGCGCTGGTCCGAGGGCGTCGCGCTGCTGGACGACATGGCTGCGGAC
GGCCTGCAGGCGAACGTCGTCGCGTACAACGCGGGCATCGCGGCATGCGC
GCGCGCCGGGCGGTGGCAGGAGGTGCGCGCGCCGACGTCACCATGCGTGG
CAAAATGAGGAGGCTAATCTGCGACGATGCGATGACGAAACTGGCACGCG
GGGCACTTCTTGATCATGGTTGCCGCCGCTCCCCTGGAAACGCTGACCTG
CGCACAGAATCGCGGTGGCGGTGTCTGCGGCGGGTGCCGCCACTCGACAG
CCAGTTCGCTCCCTGTTCACTGGTTGCTTCACGCGGCGCGGCGCGTGTGC
CCGCCTCCCTGTGCTCGCAGGCGGTGGCCGTCCTCAAGCGCATGGACGCA
GCCACGGCGGCCGCTGCCTCATAGTGCACTGAAATGATGGCACCAGGTCG
TTGTCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCATGATTTAGACCAGGG
GACCACTGCTTTTTCGCGCCCCCCCCCTTGCCCCCCCTTATGTTTCAGAC
CAGGGCAAATACCGATTTTTCGTGTGCCCCCGCCCCCCCTCAGGCAGTGG
CCCTCCTGGAGCGCATGGACGCAGCCGGCGTCGCGCCCGACAAGTATTAC
GATACAATTTTATAGCACCAGGTCATTGTCCCCCCCCCCCCCCCCTCCGA
ACGCAGCCTGTATTTCTTAGACCCACTGCTCCCCCCCCCCCCCCCCCCCC
CCCCCCGGCGCTCGCAGGCGGTGGCGCTCCTAGAGCGCATGGACGCGGCC
GGCGTCGCGCCCGACAAGTACTCGTTCGCGTCCGCCATGAACGCGTGCGC
GCGCGCGGGCCACGCGGAGCGCTGCCTCGAGCTGCTGCGCGAGATGGCGC
GGCGCGGCGTCGTGCCGGACGAGGTCGGCTACGGCACCGCCATCGCCGCC
TGCAGGTGAGCCGGCGTACGGCGCTCTCACGCGATACATCAAGCGTTCAC
AAAGGGCACACACGTATGCGATTTTTATCTGCAGGGGGACAGGAGGGGTC
ACGCGATGGGGACTTCGACCAATGCTTGATACATGCTGCGTCGGCCACAT
ACTTCGGCGCGTCACGCGGTGCATCACAAGCTCATCGAGGGCGCGCGCGT
GGAAGTGCGGTGCCTTCGACGCTGCTCCATGCAAGTTGTGCATGGCGGCA
GCAAGCGGTTGAAGCACATTGGGCACAGCCGCAGCTGCGACGTCTTTGCA
CACAACACAACACCATGCTCCCGCATGCATGTAGTTGTGACACGGTCTTC
AAGTTGAACTCGAACTGAATTCACAAAAGTTCAGGCGTGCGTGTGCCAGC
CTGAGCTTTCTCGGACATGGCCAGCTCTCGCCGGCCCTGTTTCTATTCAT
CACTGGCAGTGTGTTTACAGCCTGCAGCATCAGTGCTGGATGTTGATGTT
TGTTCACCCGCCTCGGTCTCTTGCGCTTGGTCTGTCGCGCTCGCGCCGCA
GCGCTGGCGGACAGTGGGAGCAGGCGGTGAAGCTGCTGGAGGAGATGCGC
AACATCGGCGTGCTGCCCAACGAGGCGAGTTACTGCAACGGCGTTTGCGT
GCAAACATTGCGTTGTCTTTGCAGACATGGCTTTAAGTTCAGCCCAGCCT
TAGCCCTTGCGTGCTGATGCCAGGGGAGGTCGTATTTGACAGTGAAGCAT
GTGCGCCATCAGGCATACATACTGTATGAGTGTGACGGCAGCATCGCCGC
TGGACGCGCTCATGCGCGCAGTTGCTCAAATTCATGAGGGCCCCCGTCGT
CGGCGGCGCGTCATAATGTTCACCTCATGTGCGCGATTGCCGGCATGCGC
ACTTGCAGGTCGTTTCCTGCGGGCGTGCTGACATGACTTCGTCGATACGT
GGCATTGAGCTCCACTGGCGTGTCGTGGCCAAGGAGTGGTGCCGACCTAA
GGATCTTTTGGTTTGTTTTCATTTCATACGGACAACGCATGACAGCACGG
CGGTCTAGCAGCGTATCGCTCGCCCGACAGACCCAGCCAACCAAGAACCG
CGGAGCGTGTTGTGCATATTACGCGTTGGGACAGCGTCTTGCATTCCCAA
AGACAAAGCAGAGTGAGAGCAGAGGACAGACAAACTGCATGGTGCAAGAG
CTGCATCGCACATTTGCACCCAACAACATCAAAACCACCCCCGCCAAATG
CGGCGCCTCTCCACTTGCCGACGCCGCTCACACCTCAGCGATTAAAACCT
CTGCCCTAACGGCCACCGCGCGATGAAGACTGAGCCCGTGCCGCTACCTG
AGCCCATCTGAAATGCCACTCGCGCCGCGCCGCCACCTGTGTGCTACAAG
GGCGCCAGCAACGCGTGCTTCACGCACGCCCCAAAGCGTGCTTCGCTACT
ACAGTCACAGTATGTGCCGCCATCTTAACCCACGCGCGCCGCCGCCGCGC
CGCCGCCGCGCCGCCGCCGCGCAGGTGTGCTACAACGCCGCCATCAACGC
GTGCACCAAGGCGGCGGCGTGGGAGGAGGCGAACCGCCTGCTGGAGGAGA
TGTCGGCGCGCGGCCTCGCGCCCAACGAGCGCAGCTACAACGCCGTCATG
GACGCGTGCCGCCGCGGCAGCGACGGCGGCGCCGCCGCGCTGCAGCAGCT
CGACCGCATGAAGGCGCGCGGCGTGGCGCCGTCGCTGAGGTGCGCAGTGA
TGCAGCGCCGCGCACGGGACAGAAGAGGAAGTTTGTTCGGGCTGCACTGT
TCGTAAAGCGTGTCAGGAGCGCTTGCGCATACGCACCGCTTGTCAAGCGT
GTTTGGGTCGCGGCGCCCACGGAAGGCACACGCAGCGACGTCACGTGGCA
CTGCAGATTGGCTGCGATGGCTGCGATGAACCAGTTCGCAGGGCTCTCAT
GTATGCGGGAGTGGCTTGCTGTCACGTGCGCATGCCCACCGGACGCCGCA
CCCACATGAGCATCTGCAGATGCAGCGGCGGCAGCGGCGCGGCGCCGCTG
CTGCGGAGGGGTCATTGGTACTGTGCGGCAGCGGCGCGGCGGCGCTGCCG
CGGAGGGCTCGTTTTGCGCGCTCACGCATTATTGCAAGCGCAGCGGCGGC
AGGGGCAGTGAATCTGCAGCACTCAGTAGCTACACGGCGCATGTGTTTGT
GCTTGTGTGGAGGTTTACACGTGGATCAGGCGCGCCGCACTGCAATCATC
GCCACCAGCTTCCGCAGGCAGCCGCGGCGGCAACCACGGCCCACCAAGCA
GCGCTTCTGTCAGCAGTCACAGCCTAGCATCCGCCCTCATTGCAGGGCAC
GACTCTCATGTGCAGAGCAGTATACGTATGTTAAACCCCTCCAGTGCCCG
CCGAACACGGCCGCATGCTCTTACTGAGCACTGCTGCCAGAAGTCAGGAC
ATATTTATGCTTGCAAGCAGCGCACGAAGGCGTGCATACAAGTACATACA
CGCTGAATACGCGCGCTTGCCCTCTCACGCCCGATGCACACGTGCCCCCC
CCCCCCCCTCCCGCGCCCCCCTGCGCCGCTTCCGCCGCCGCGCAGGGCGT
ACACGGCGGCGATAGAGGCGTGCGGCGGCGGCGACGCGCAGCGCTGGCAG
CGCGGCATGGGGCTGCTGGAGGAGATGCGCAAGGCGGGCGCAGCGCCGGA
TACGCGCGCGTACATGGCGGCGATAGGCGCGTGCGCGGCGCACCGCAAGT
GGCGCCGCGCCGTGCAGCTGCTCGAGGAGATGCGCGAGGCGGGCGTGCCG
CCGGACCGGCCGTGCTACGCGCGCGCCATCCAGTGAGTGGCCGCGCACTG
CGCTGCGCTGCGCTGCGCTGCTGCTGCCTCGTCCATTGTCGTTGTGCCGC
TGCCAGCTCATGTGCATCCTCGGTCCCAAGGTTACATACTTGACTTTTTT
TAAAGTATTGCAATTCTCAGGCACGACTTCAAGTGGGGATGGGCCGTGCT
ACGCGCGCGCCATCCAGTGAGTGACGGCGCGCTGCGCTGCTGCTGCCTTG
TCCATTGCGGGTTGTCATGTTGCTGCCAGGACATGGAGTTCTTGCATCCT
TGATTGAAGGTTACTGCTCTTAATGCACAACTTCAAGTGGTGACGTGCCG
TGCTACACGCGCGCCATCCAGTGAGTGACCGCGCGTTGCTGCTGCCAGGT
CGTGTCGCCATTGCATACATGGGGATTTTGATGTGCGGCTGCCAGGTCAT
TGCAACATCGGGCAGAGCTCGGGGCACAACTTCATGTGGGGATTGGCCGT
ACTATGCGCGCGCCATCCAGTGAGTGGCGCGCGGTCGCTGCATTGCTTGC
GCCACGAATGGTCGTGCATCCGCCAGCGCATGTACTTCACGCAAAATCAG
GTCACTGCATCTTGGGCAAAGCTCCGGGCATAGAGTGGGGATGGACCGTG
CAACGCGCACGCCATCCATCGTGAGTTGCCGTGCGCTGCGCTGCTGCTGC
CTTGTCCATCACGGGTTGTCATGTTGCTGCCGGTACTTGCTCTCAGCCAA
TCCTAACTCCAGCAGCCGCCTGCTCCAGCTGTTCAAGACTTCTATTTCTA
TCAGAAATGCCCTCTGTGGGCGGCGTGCAAAAAGAAAGTGCGCTCACCCC
GCAGCCCGCGCTCAGTCAACCTCAACTTCAACACTTCTTCAACTCCGAAT
CGATCTTCAACCGACCGCGCCAGCGTCAGGCAGAGCGTACGTGCTAATGT
GTCATAATTGTCACGAGCCGCAGGGCGTGCGCCACGCAGTCCAAGTGGGA
GCGCACCGTCGGCCTGCTCGTGGTCATGGCGGACCGCGGCGTCGCAACTT
CAATACTTGTTCAATCCCCAATTGAACTTCAACCGACCGCGCCAGCGTCA
GGCAGAGGGTACGTGCTAATGTGTCATCATTGTCACGTGCCGCAGGGCGT
GCGCCACGCAGTCCAAGTGGGAGCGCGCCGTCGGCCTCCTCATGGACATG
GCGGACCGCGGCGTCACAACTTCAATACCTTTTCAACTCCTAATTGAACT
TCAACCGACCGCGCCAGCGTCAGGCAGAGCGTACGTGCTAAACGTGTCAT
GACTGTCATGCGCCGCAGGGCGTGCGCCACGCAGTCCAAGTGGGAGCTCA
CTCAACTTCAAAACGGACTTCGCATTCGCATTCGCAGGGCGTGCGCCACG
CAGTCCAAGTGGGAGCGCGCCGTCTCCATCCTCGTGGACATGGCGGACCG
CGGCGTCCCCCCCGACGAGGGCTGCTACGTCGAGGCGATCCGCGCGTGCC
GCGGCGCCGGCGTTGTGCGCGAGGCGCAGCGCCTGCAGGAGGTCCTGGAC
GAGCTGCGCGCTGCGCGGCAGCAGCGCGACGCCGACGCGGATGCGTACCG
GCGCGGCGGCGACGGCGCGCGCCAGGCGCTCCGCAGCGGCGCCGCGGAGC
AGGAGGAAGAGGGCGCGCCCGCGCTGGCGACTGCGGCGGCGGCGGCTGCG
GCGGGCGGCGCTGCCTGA
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Coding sequence (CDS) from alignment at Contig_27:829024..834591+

>mRNA_6970 ID=mRNA_6970|Name=jgi.p|Trimin1|163767|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1284bp|location=Sequence derived from alignment at Contig_27:829024..834591+ (Tribonema minus UTEX_B_3156 )
AGGTGGAAGGAGGCGCTGGGCGCGCTGCGCGCCGCGCGCGCCGCCGGCAC
GCGCCTCAACGTCTTCGTCTTCGGCGCGGCCATCACGGCGATGGCGCGCA
GCGGGCGCTGGTCCGAGGGCGTCGCGCTGCTGGACGACATGGCTGCGGAC
GGCCTGCAGGCGAACGTCGTCGCGTACAACGCGGGCATCGCGGCATGCGC
GCGCGCCGGGCGGTGGCAGGAGGCGGTGGCGCTCCTAGAGCGCATGGACG
CGGCCGGCGTCGCGCCCGACAAGTACTCGTTCGCGTCCGCCATGAACGCG
TGCGCGCGCGCGGGCCACGCGGAGCGCTGCCTCGAGCTGCTGCGCGAGAT
GGCGCGGCGCGGCGTCGTGCCGGACGAGGTCGGCTACGGCACCGCCATCG
CCGCCTGCAGCGCTGGCGGACAGTGGGAGCAGGCGGTGAAGCTGCTGGAG
GAGATGCGCAACATCGGCGTGCTGCCCAACGAGGCGAGTTACTGCAACGG
CGTGTGCTACAACGCCGCCATCAACGCGTGCACCAAGGCGGCGGCGTGGG
AGGAGGCGAACCGCCTGCTGGAGGAGATGTCGGCGCGCGGCCTCGCGCCC
AACGAGCGCAGCTACAACGCCGTCATGGACGCGTGCCGCCGCGGCAGCGA
CGGCGGCGCCGCCGCGCTGCAGCAGCTCGACCGCATGAAGGCGCGCGGCG
TGGCGCCGTCGCTGAGGGCGTACACGGCGGCGATAGAGGCGTGCGGCGGC
GGCGACGCGCAGCGCTGGCAGCGCGGCATGGGGCTGCTGGAGGAGATGCG
CAAGGCGGGCGCAGCGCCGGATACGCGCGCGTACATGGCGGCGATAGGCG
CGTGCGCGGCGCACCGCAAGTGGCGCCGCGCCGTGCAGCTGCTCGAGGAG
ATGCGCGAGGCGGGCGTGCCGCCGGACCGGCCGTGCTACGCGCGCGCCAT
CCAGGCGTGCGCCACGCAGTCCAAGTGGGAGCGCGCCGTCTCCATCCTCG
TGGACATGGCGGACCGCGGCGTCCCCCCCGACGAGGGCTGCTACGTCGAG
GCGATCCGCGCGTGCCGCGGCGCCGGCGTTGTGCGCGAGGCGCAGCGCCT
GCAGGAGGTCCTGGACGAGCTGCGCGCTGCGCGGCAGCAGCGCGACGCCG
ACGCGGATGCGTACCGGCGCGGCGGCGACGGCGCGCGCCAGGCGCTCCGC
AGCGGCGCCGCGGAGCAGGAGGAAGAGGGCGCGCCCGCGCTGGCGACTGC
GGCGGCGGCGGCTGCGGCGGGCGGCGCTGCCTGA
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