mRNA_6964 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348590
Unique NamemRNA_6964
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: A0A835Z170_9STRA (Hsp70 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z170_9STRA)

HSP 1 Score: 1257 bits (3253), Expect = 0.000e+0
Identity = 705/705 (100.00%), Postives = 705/705 (100.00%), Query Frame = 1
Query:  121 MSLATAGVGAGAMPPVMNMPPPMMSGNAVALHQAPPTFGAGAAGCADACCGAGGAYDLRGQAAADAGPQEDLSACLGVALGATTYSACLYLADKGAVPLTGRAPLPAALWLDPKTGARGLRKWAKRDSRSGALPKAVTVGLRGEGEAGLLRVPAGMRLLGARHRPGALLREAAAWPVELVEAARGDDAADDTSGVHICLPGEAGQEWRACEPEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVKKSNDKMKRMLNALALVAALLALIVGGYFQLQALAEKPAKDMARAREKLTKFYEVVNPAKLTTVEDTVKR 2235
            MSLATAGVGAGAMPPVMNMPPPMMSGNAVALHQAPPTFGAGAAGCADACCGAGGAYDLRGQAAADAGPQEDLSACLGVALGATTYSACLYLADKGAVPLTGRAPLPAALWLDPKTGARGLRKWAKRDSRSGALPKAVTVGLRGEGEAGLLRVPAGMRLLGARHRPGALLREAAAWPVELVEAARGDDAADDTSGVHICLPGEAGQEWRACEPEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVKKSNDKMKRMLNALALVAALLALIVGGYFQLQALAEKPAKDMARAREKLTKFYEVVNPAKLTTVEDTVKR
Sbjct:    1 MSLATAGVGAGAMPPVMNMPPPMMSGNAVALHQAPPTFGAGAAGCADACCGAGGAYDLRGQAAADAGPQEDLSACLGVALGATTYSACLYLADKGAVPLTGRAPLPAALWLDPKTGARGLRKWAKRDSRSGALPKAVTVGLRGEGEAGLLRVPAGMRLLGARHRPGALLREAAAWPVELVEAARGDDAADDTSGVHICLPGEAGQEWRACEPEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVKKSNDKMKRMLNALALVAALLALIVGGYFQLQALAEKPAKDMARAREKLTKFYEVVNPAKLTTVEDTVKR 705          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: D8LCN8_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN8_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 1.460e-60
Identity = 238/748 (31.82%), Postives = 329/748 (43.98%), Query Frame = 1
Query:  286 YDLRGQA--AADAGPQEDLSACLGVALGATTYSACLYLADKGAVPLTGRAPLPAALWLDPKTGARGLRKWAKRDSRSGALPKAVTVGLR------------------------GEGEAGLLRVPAGMRLLGARHR--------PGALLREAAAWPVELVEAARGDDAAD-DTSGVHICLPGEAGQEWRACE----PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETA-------------------------------------------AVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEG--FKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLR-----GVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAG--TEVRAVQTV--DAAGSDVTAAL----VTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVKKSND-KMKRMLNALALVAALLALIVGGYFQLQALAEKPAKDMARAREKLTKFYEVVNPAKLTTVEDTVKR 2235
            YDLR  A  A +    ED  ACLGV +G ++  ACLYL D G   + G+APLPA + +D KTG +G+R+W K  +  G  P A   G++                         +G    +  P  +RLL  R +          +L  +     VE  EA   DD  D DTSGV + L      E +  E    PE +LA LL  ++ KA  A  V   TCN + P   GD  RVALQR+VFLAGM P RFV +PLAAAVG L        +G D   + AV +G               +  +A                                           A  GD+  GG DMDYL+ARAL AA+ED+ G E A +   ++ L+ +A+  RE LS + +++V L  G   + P  + + +V                                 +TVV+ G  A   PAL + V   F  A++      + A+GAALLLA  RG+L      G DAL+   GL V     GA AV+                    LF  G+R+P++  R F       +G   ++  V+ +  D +G   +A+     VTV  LG+PL   DDRGYP LA             VT  F++DECGI  +EV+  V+P K      ++R+LN   +++ +  L  GGY+ L  L     +  A AR +LT FYE  NP KL+TVED + R
Sbjct:   64 YDLRAAACEAEEEELDEDTHACLGVDVGTSSIKACLYLKDGGCKTVGGKAPLPAGILIDRKTGVKGVRRWLKSRAGGGQAPAAPAKGVKLFHAVGGXXXXXXXXXXXXXXXXXXDGNGAAVVWP--LRLLALRGKGAEATQRVQSSLRHDIEVSSVESKEAT--DDQGDGDTSGVRVLLTSPDAAETKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDD-LILAVGMGASFLDVSLIAPTREASPPSADSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAEAQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSSGPEVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEV---------------------------------KTVVLYGSCAKT-PALLEEVVKMFLDAQIEHPGVGDCAKGAALLLAGSRGLLNALPVTGHDALSHKLGL-VDRSKKGAEAVE--------------------LFPTGSRVPSSITRQFSRKSAGSSGLAVDLEIVEWMEGDKSGERGSASSGGTWVTVQRLGNPLAMQDDRGYPVLAE-----------EVTTLFSLDECGICVNEVESSVLPKKAGGPGSLRRLLNQALIISIVFGLFGGGYWLLYRLEHAGERRQASARIRLTNFYEQHNPEKLSTVEDALAR 740          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: A0A257DFI3_9BURK (Chaperone protein HscA homolog n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DFI3_9BURK)

HSP 1 Score: 89.0 bits (219), Expect = 1.250e-14
Identity = 119/420 (28.33%), Postives = 180/420 (42.86%), Query Frame = 1
Query:  754 PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAA-AAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKD 2010
            P  + A +L +LR +A   F  E      TVPA+F DA R A + A  LAG+   R ++ P AAA+        GL  G++G  + AV               +AG  E  A  GD+  GG D D+ LA    A  +    AE+AQ+  +A++ AAR+A+E LS    AT+  P    P  P  E + +V+R + +     L+ R   +LR +   A    A V+ VV+ GG +  MPA+Q AVA  F KA +   +  E                  V AL  A         +GA  +   D +PL + L T GG  E +  + + +P    + F   +  +    +  VQ      SD  +           L +++ RG P +             R+ + FTVD  G+LS   ++
Sbjct:  125 PVEVSAEILATLRQRAEDTFDDELFGAVVTVPAYFDDAQRQATKDAAQLAGLNVLRLINEPTAAAIAY------GLENGSEG--LYAVYDLGGGTFDISLLRLSAGVFEVVATGGDSALGGDDFDHALAD--WALAQAGMSAESAQDK-RAVLVAARAAKEKLSSADHATLACPISGSPGGP-TELSVRVTRDQFDAITHDLVLRTVTVLRKVLRDAKTDKAAVQGVVMVGG-STRMPAVQAAVADFFGKAPLNNLNPDE------------------VVALGAALHANTLAGNAGAEEMLLLDVIPLSLGLETMGGLVERIIPRNSAIPTARAQDFTTFKDGQTALAIHVVQGERELVSDCRS-----------LARFELRGIPPMVAGA--------ARIRVSFTVDADGMLSVAARE 494          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: UPI000FDDB2D2 (Fe-S protein assembly chaperone HscA n=1 Tax=Piscinibacter defluvii TaxID=1796922 RepID=UPI000FDDB2D2)

HSP 1 Score: 87.4 bits (215), Expect = 3.770e-14
Identity = 122/427 (28.57%), Postives = 182/427 (42.62%), Query Frame = 1
Query:  754 PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLER----ISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEA-ARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAA---DALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKD 2010
            P  + A +L +LR +A  +F  E      TVPA+F DA R A + A  LAG+   R +S P AAA+        GL  G++G  + AV               +AG  E  A  GD+  GG D D LLA     AL+         +  +A++AAAR+A+E LS    AT+  P G        E   +V+R E      PL+ R    + ++LRD   A  G A V+ VV+ GG +  MP +Q AV   F +A +T  +  E  A GAA+                       AH L+G A  +     D +PL + + T GG  E +  + + +P    + F   +  +    +  VQ               VAD    L +++ RG P +A            R+ + F VD  G+L+   ++
Sbjct:  125 PVEVSAEILAALRQRAEDSFDDELFGAVITVPAYFDDAQRQATKDAAQLAGLNVLRLISEPTAAAIAY------GLEHGSEG--LYAVYDLGGGTFDISLLRLSAGVFEVIATGGDSALGGDDFDALLA---DWALQRGGLTADTPQDKRAVLAAARAAKEKLSSADHATLACPLGG------GELQVRVTRDEFVALTEPLVARTLAAVRKVLRD---ARVGAAEVQGVVMVGG-STRMPRVQAAVGELFGRAPLTNLNPDEVVALGAAIQ----------------------AHALAGNAGAEELLLLDVIPLSLGIETMGGLVERIIPRNSTIPTARAQDFTTFKDGQTAMAIHVVQ----------GERELVADCRS-LARFELRGIPPMAAGA--------ARIRVSFQVDADGLLAVSARE 489          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: UPI0019A394BA (Fe-S protein assembly chaperone HscA n=1 Tax=Pseudorhodobacter sp. TaxID=1934400 RepID=UPI0019A394BA)

HSP 1 Score: 84.3 bits (207), Expect = 3.500e-13
Identity = 119/428 (27.80%), Postives = 183/428 (42.76%), Query Frame = 1
Query:  754 PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLA--RALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAA-AAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVK 2028
            P  + A +L +LR +A  +F  E      TVPA+F DA R A + A  LAG+   R ++ P AAA+        GL  G++G  + A+                AG  E  A  GD+  GG D D+LLA     +A L+    AE+AQ+  +A++ AAR+A+E LS    AT+  P G+       E + +V+R + E     L+ R    LR +   A A  + V+ VV+ GG +  MP +Q AVA  F K  +T  +  E     A + A+      G D L                     D +PL + L T GG  E +  + + +P    + F   +  +    V  VQ      SD  +           L +++ RG P +             R+ + F VD  G+L+   ++ V  V+
Sbjct:  125 PVQVSAEILATLRFRAEDSFDDELFGAVVTVPAYFDDAQRQATKDAAQLAGLNVLRLINEPTAAAIAY------GLENGSEG--LYAIYDLGGGTFDISLLRLTAGVFEVVATGGDSALGGDDFDHLLADWALSRAGLK----AESAQDK-RAVLVAARAAKEKLSSTDHATLACPLGA------TELSVRVTRDQFETLSHDLITRTMTALRKVLRDAKADKSDVQGVVMVGG-STRMPMVQAAVADFFGKPPLTNLNPDEVVALGAAIQANALAGNAGADDLLLL------------------DVIPLSLGLETMGGLVERIIPRNSTIPTARGQDFTTFKDGQTALAVHVVQGERELVSDCRS-----------LARFELRGIPPMVAGA--------ARIRVSFQVDADGLLAVSAREEVSGVE 495          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: A0A5C7Q5F8_9BURK (Chaperone protein HscA homolog n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A5C7Q5F8_9BURK)

HSP 1 Score: 82.4 bits (202), Expect = 1.400e-12
Identity = 119/420 (28.33%), Postives = 176/420 (41.90%), Query Frame = 1
Query:  754 PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLA-RALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKD 2010
            P  + A +L +LR +A  +F  E      TVPA+F DA R A + A  LAG+   R +S P AAA+        GL  G++G  + AV               +AG  E  A  GD+  GG D D +LA  ALQ A  +A  A+      +A++AAAR+A+E LS    AT+  P  S   + EV  T        E  VA  L  + ++LRD   A  G   V+ VV+ GG +  MP +Q AV   F +  +T  +  E     A + A+      G D L                     D +PL + L T GG  E +  + + +P    + F   +  +    +  VQ      SD  +           L +++ RG P +             R+ + F VD  G+LS   ++
Sbjct:  125 PVEVSAEILATLRQRAEDSFDDELFGAVITVPAYFDDAQRQATKDAAQLAGLNVLRLISEPTAAAIAY------GLEHGSEG--LYAVYDLGGGTFDISLLRLSAGVFEVVATGGDSALGGDDFDAMLAAHALQRAGLEAVTAQ----DKRAVLAAARAAKEKLSGADHATLACPLAS--GELEVRITRDEFFALTEPLVARTLAAVRKVLRD---AKVGKDEVQGVVMVGG-STRMPRVQAAVGELFGRTPLTNLNPDEVVALGAAIQANALAGNAGADELLLL------------------DVIPLSLGLETMGGLVERIIPRNSTIPTARAQDFTTFKDGQTAMAIHVVQGERELVSDCRS-----------LARFELRGIPPMVAGA--------ARIRVTFQVDADGLLSVSARE 489          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: UPI0006152765 (Fe-S protein assembly chaperone HscA n=2 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI0006152765)

HSP 1 Score: 81.3 bits (199), Expect = 3.240e-12
Identity = 133/469 (28.36%), Postives = 202/469 (43.07%), Query Frame = 1
Query:  718 PGEAGQEWRAC--EPEHLLAALLVSLRLKAAAAFKV-ECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLER----ISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEA-ARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAA---VQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDV------VVPVKKS----NDKMKRMLN 2061
            PG    E RA    P  + A +L +LR +A   F   E      TVPA+F DA R A + A  LAG+   R ++ P AAAV        GL  G++G  + AV               A G  E  A  GDA  GG D D  LA     AL+ A  + A+ +  +AL+ AAR+A+E L++  +AT+   + +L   P      +VSR + +    PL++R    +  +LRD   A      V+ VV+ GG +  MP+++ AVA AF +  +T  +  E  A GAAL                       A+ L+G A    +   D +PL + L T GG  E +  + + +P    + F   Q  +    +  VQ      SD  +           L +++ RG P +             R+ + F VD  G+L+   K++       + VK S    +D + RML+
Sbjct:  111 PGMVALETRAGIKSPVEVSAEILATLRQRAEDTFDADEIFGAVITVPAYFDDAQRQATKDAAQLAGLNVLRLINEPTAAAVAY------GLDNGSEG--LYAVYDLGGGTFDISLLRLARGVFEVVATGGDAALGGDDFDGALA---DWALQQAGRSAASAQDKRALLVAARAAKERLTDAPQATL---SATLADGP---LAVEVSRAQFDVLTRPLIDRTLASVKRVLRD---ARVQRDEVQGVVLVGG-STRMPSVRAAVAEAFGREPLTNVNPDEVVAIGAALQ----------------------ANQLAGNAPDGEILLLDVIPLSLGLETMGGLVERVIERNSTIPTAKAQEFTTYQDGQTAMAIHVVQGERELVSDCRS-----------LARFELRGIPPMVAGA--------ARIRVTFEVDADGLLNVSAKEMHSGVEAAIVVKPSYGLADDDIARMLS 517          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: A0A1W6YZE2_9BORD (Chaperone protein HscA homolog n=2 Tax=Bordetella genomosp. 9 TaxID=1416803 RepID=A0A1W6YZE2_9BORD)

HSP 1 Score: 81.3 bits (199), Expect = 3.250e-12
Identity = 121/425 (28.47%), Postives = 183/425 (43.06%), Query Frame = 1
Query:  775 LLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLER-ISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEA-ARGAAL---LLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVKKS 2034
            +L  L+ +A AA   E V    TVPA+F DA R A + A  LAG+   R ++ P AAA+        GL   A+G  V AV                 G  E  A  GD   GG D D L+A    +++ +A   + ++   +AL+ AAR+ARE LS EA  +V  P      +   E    ++R   E   APL+ER ++   R +  A    A VR VV+ GG A  MP +++AV   F +  +T  D  +  A GAAL   LLA  R  L G D L                     D +PL + L T GG  E +  + + +P    + F   +  ++   +  VQ       ++ +A  ++A       +++ RG P +             R+ + F VD  G+L    ++    V+ S
Sbjct:  131 ILARLKARAEAALGDELVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAY------GLENAAEG--VYAVYDLGGGTFDVSILRLTKGVFEVVATGGDTALGGDDFDALIAEWAASSIPEAK--DWSRHDRRALMVAARAARERLSVEAATSVRFPL-----RDGTEVDVPLTREHFETMAAPLIERTLACARRALRDAGLKPADVRGVVMVGG-ATRMPVVRRAVGELFGQTPLTDLDPDQVVALGAALQANLLAGNR--LPGEDWLLL-------------------DVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQSAMSIHVVQ----GERELVSACRSLA-------RFELRGIPPMVAGA--------ARIRVTFQVDADGLLGVTAREQSTGVEAS 499          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: UPI00037A57AB (Fe-S protein assembly chaperone HscA n=2 Tax=Caldimonas TaxID=196013 RepID=UPI00037A57AB)

HSP 1 Score: 80.1 bits (196), Expect = 7.430e-12
Identity = 123/441 (27.89%), Postives = 181/441 (41.04%), Query Frame = 1
Query:  718 PGEAGQEWRACE--PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDAHGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLER----ISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEA-ARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAA---DALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKD 2010
            PG      RA E  P  + A +L  LR +A  +F  E      TVPA+F DA R A + A  LAG+   R ++ P AAA+        GL  G++G  + AV               + G  E  A  GD   GG D+D  LA     AL +A       +  +A++ AAR A+EALS E    +H   G  P +        V+R  LE    P ++R    + ++LRD   A A    V+ VV+ GG +  MP +++AV A F +  +   +  E  A GAA+                       AH L+G A  Q     D +PL + + T GG  E +  + + +P    + F      + G    A+  V      V             L +++ RG P +A            RV + FTVD  G+L    ++
Sbjct:  111 PGMVAIATRAGEKSPVEVSAEILAVLRQRAEDSFDDEVFGAVITVPAYFDDAQRQATKDAARLAGLNVLRLINEPTAAAIAY------GLEHGSEG--LYAVYDLGGGTFDISLLRLSKGVFEVVATAGDTALGGDDIDQALA---DWALAEAGLQAGTAQDKRAVLVAARQAKEALSVEDRTVMHCQVGQRPLE------LVVTRQRLEALARPWVDRTLATVRKVLRD---AKASTEDVQGVVMVGG-STRMPLVRQAVGACFGREPLVNLNPDEVVALGAAIQ----------------------AHALAGNAGAQELLLLDVIPLSLGVETMGGLVERIIPRNSTIPTARAQDFTT---FKDGQTAMAIHVVQGEREQVEHCR--------SLARFELRGIPPMAAGA--------ARVRVSFTVDADGLLQVSARE 489          
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Match: A0A1C3K1J1_9BURK (Chaperone protein HscA homolog n=14 Tax=root TaxID=1 RepID=A0A1C3K1J1_9BURK)

HSP 1 Score: 79.7 bits (195), Expect = 1.020e-11
Identity = 124/443 (27.99%), Postives = 181/443 (40.86%), Query Frame = 1
Query:  754 PEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAV--GALHSEKGGLARGADGGAVAAVRVGXXXXXXXXXXXAAAGALETAAVRGDAGAGGGDMDYLLA--------RALQAALEDAHGAEAAQEGFKALVAAARSAREALS--EEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLER----ISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAAQGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVKKS 2034
            P  + AA+L +LR +A A      V    TVPA+F DA R A + A  LAG+   R ++ P AAA+  G  H  +G  A    GG    + +               G  E  A  GD   GG D D L+          A Q AL +          ++AL+ AAR+AREALS  E A+ TV LP G             ++R   E    PLL R    +S  LRD   A    A VR VV+ GG A  MP +++ V   F    +T  D  +     AL  AS+  +L G  A  +   L               D LPL + L T GG  E +  + + +P    + F   +  ++   +  VQ       D+ A   ++A       +++ RG P +             R+ + F VD  G+L    +++   ++ S
Sbjct:  141 PVEVSAAILSALRERAEATLGDTLVGAVITVPAYFDDAQRQATRDAAKLAGLNVLRLLNEPTAAALAYGLDHDAEGVYAVYDLGGGTFDISI----------LRLTQGVFEVVATAGDTALGGDDFDALIVDEWVKDDPAAAQQALREPR-------AYRALLVAARAAREALSAQESADYTVELPDGQC-------LAGTLTRAHFETLAQPLLSRTLECVSRTLRD---ARLAPADVRGVVMVGG-ATRMPVVRRVVGELFGAEPLTDLDPDQVV---ALGAASQANLLAGNRAPGEDWLLL--------------DVLPLSLGLETMGGLVEHIVPRNSTIPVARAQEFTTFKDGQSAMSIHVVQ----GERDLVADCRSLA-------RFELRGIPPMVAGA--------ARIRVTFQVDADGLLGVSARELTTGIEAS 519          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348590 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z170_9STRA0.000e+0100.00Hsp70 protein-domain-containing protein n=1 Tax=Tr... [more]
D8LCN8_ECTSI1.460e-6031.82Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A257DFI3_9BURK1.250e-1428.33Chaperone protein HscA homolog n=1 Tax=Burkholderi... [more]
UPI000FDDB2D23.770e-1428.57Fe-S protein assembly chaperone HscA n=1 Tax=Pisci... [more]
UPI0019A394BA3.500e-1327.80Fe-S protein assembly chaperone HscA n=1 Tax=Pseud... [more]
A0A5C7Q5F8_9BURK1.400e-1228.33Chaperone protein HscA homolog n=2 Tax=Burkholderi... [more]
UPI00061527653.240e-1228.36Fe-S protein assembly chaperone HscA n=2 Tax=Aquin... [more]
A0A1W6YZE2_9BORD3.250e-1228.47Chaperone protein HscA homolog n=2 Tax=Bordetella ... [more]
UPI00037A57AB7.430e-1227.89Fe-S protein assembly chaperone HscA n=2 Tax=Caldi... [more]
A0A1C3K1J1_9BURK1.020e-1127.99Chaperone protein HscA homolog n=14 Tax=root TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:785437..794936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348590|estExt_Genemark1.C_Ctg_270087
KEGG TC1.A.33
BRITEko00000,ko03110
KEGG koko:K04044
GOsGO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141
Preferred namehscA
DescriptionChaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB
COG categoryO
Max annot lvl28216|Betaproteobacteria
EggNOG OGsCOG0443@1|root,COG0443@2|Bacteria,1MVQI@1224|Proteobacteria,2VHGV@28216|Betaproteobacteria,1KJ1Y@119065|unclassified Burkholderiales
Evalue3.63e-13
Seed ortholog864051.BurJ1DRAFT_3624
Hectar predicted targeting categoryother localisation
TranscriptId348912
TrackFilteredModels1
ProteinId348590
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348590gene_6964Tribonema minus UTEX_B_3156 geneContig_27 785437..794936 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348590Trimin1|348590|estExt_Genemark1.C_Ctg_270087Tribonema minus UTEX_B_3156 polypeptideContig_27 785437..794624 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6964_14exon_6964_14Tribonema minus UTEX_B_3156 exonContig_27 785437..785512 -
exon_6964_13exon_6964_13Tribonema minus UTEX_B_3156 exonContig_27 786061..786195 -
exon_6964_12exon_6964_12Tribonema minus UTEX_B_3156 exonContig_27 786779..786855 -
exon_6964_11exon_6964_11Tribonema minus UTEX_B_3156 exonContig_27 787495..787527 -
exon_6964_10exon_6964_10Tribonema minus UTEX_B_3156 exonContig_27 787666..787849 -
exon_6964_9exon_6964_9Tribonema minus UTEX_B_3156 exonContig_27 788493..788591 -
exon_6964_8exon_6964_8Tribonema minus UTEX_B_3156 exonContig_27 789339..789392 -
exon_6964_7exon_6964_7Tribonema minus UTEX_B_3156 exonContig_27 789480..789692 -
exon_6964_6exon_6964_6Tribonema minus UTEX_B_3156 exonContig_27 790167..790381 -
exon_6964_5exon_6964_5Tribonema minus UTEX_B_3156 exonContig_27 791029..791336 -
exon_6964_4exon_6964_4Tribonema minus UTEX_B_3156 exonContig_27 792607..792752 -
exon_6964_3exon_6964_3Tribonema minus UTEX_B_3156 exonContig_27 793654..794102 -
exon_6964_2exon_6964_2Tribonema minus UTEX_B_3156 exonContig_27 794496..794681 -
exon_6964_1exon_6964_1Tribonema minus UTEX_B_3156 exonContig_27 794874..794936 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6964CDS_6964Tribonema minus UTEX_B_3156 CDSContig_27 794496..794624 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_6964UTR5_6964Tribonema minus UTEX_B_3156 five_prime_UTRContig_27 794874..794936 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6964 ID=mRNA_6964|Name=jgi.p|Trimin1|348590|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2238bp|location=Sequence derived from alignment at Contig_27:785437..794936- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGTTGCAACAAATTGTGGACAGCAAGCCGGCGAAGCGTCTCCAAGCGCGG
TCGTGAAACGAGGGTGCTTCGACGCCTGAACAATCGGCGGGTCGTTGAAA
AGAACACCGGTTGAGAGAGCATGTCGCTTGCGACCGCTGGCGTTGGAGCA
GGGGCGATGCCCCCTGTGATGAATATGCCGCCGCCCATGATGAGCGGCAA
TGCCGTCGCTCTACACCAGGCTCCGCCGACCTTCGGCGCTGGCGCAGCTG
GCTGCGCGGACGCGTGCTGCGGCGCGGGCGGCGCCTACGACTTGCGCGGC
CAGGCCGCCGCCGACGCCGGCCCCCAGGAGGACCTCAGCGCATGCCTCGG
CGTCGCGCTCGGCGCCACCACGTACTCCGCGTGCCTGTACCTGGCAGACA
AGGGCGCCGTGCCGCTCACCGGGCGTGCGCCGCTGCCCGCGGCGCTGTGG
CTCGACCCGAAGACGGGGGCGCGCGGGCTGCGCAAGTGGGCGAAGCGCGA
CAGCCGCTCCGGCGCGCTGCCGAAGGCGGTGACGGTGGGGCTGCGCGGGG
AGGGGGAGGCGGGGCTGCTGCGCGTGCCCGCGGGCATGCGGCTGCTCGGT
GCACGGCACCGGCCCGGAGCGCTGCTGCGGGAGGCGGCGGCGTGGCCCGT
GGAGCTGGTAGAGGCGGCGCGCGGCGACGACGCCGCCGATGACACCAGCG
GCGTGCACATATGCCTGCCGGGCGAGGCGGGCCAGGAGTGGCGCGCGTGT
GAGCCGGAGCACCTGCTGGCGGCGCTGCTGGTGTCGCTGCGCCTGAAGGC
CGCCGCCGCCTTCAAGGTGGAGTGCGTCACCTGCAACTTCACGGTGCCCG
CGTGGTTCGGCGACGCGCCGCGCGTCGCGCTGCAGCGCGCCGTCTTCCTC
GCCGGCATGCGCCCCGCGCGCTTCGTGTCGGCGCCGCTCGCCGCCGCCGT
CGGCGCGCTGCACAGCGAAAAGGGCGGACTCGCGCGAGGAGCGGATGGGG
GGGCGGTCGCGGCGGTGCGCGTGGGCGGCGGCGGCGCGGGTGCGGCGCTG
CTGCGGCGCGCGGCGGCGGGGGCGCTGGAGACCGCGGCGGTGCGGGGGGA
CGCGGGGGCGGGGGGGGGCGACATGGACTACCTGCTGGCGCGCGCGCTGC
AGGCGGCGCTCGAAGATGCGCACGGCGCGGAAGCGGCGCAGGAGGGGTTC
AAGGCTCTCGTAGCGGCAGCACGCAGCGCGCGCGAGGCGCTGTCCGAAGA
GGCAGAGGCCACGGTTCACCTGCCAGCGGGGTCGCTGCCGTCGCAGCCGG
AGGTGGAGTTCACGACAAAGGTGTCCAGGGGGGAGCTGGAGCAGGCAGTG
GCGCCGCTGCTGGAAAGAATATCAGAGATGCTCAGGGACATCGCGGCGGC
AGCAGCTGGCGGCGCGCCGGTGCGCACCGTCGTCGTCAGCGGCGGCGTCG
CGCTGGCGATGCCGGCGCTGCAGAAGGCCGTCGCCGCGGCGTTCCCAAAG
GCGGAGGTCACGCGCACGGACGGCACGGAGGCGGCGCGCGGCGCGGCGCT
GCTGCTGGCTAGCGAGCGCGGCGTCCTCAGGGGGGTCGATGCACTGGCAA
AGGCGCGTGGGCTCCGCGTGGCGCATCCGCTGTCCGGCGCGGCGGCGGTG
CAGGCGGCGGACGCGCTGCCTCTGCAGATCAGCCTGGTCACGGGCGGCGG
CAGTCCGGAGGTGCTGTTCGCGCAGGGCACGAGGCTGCCAGCCACAACTG
AGCGCTGCTTTGATGCAGCGCAGGGCCACCGCGCCGGCACGGAGGTGCGC
GCCGTGCAGACGGTGGACGCCGCGGGGTCAGATGTAACTGCCGCACTCGT
AACTGTCGCCGACCTCGGCGACCCTCTGAACCAGTACGACGACAGGGGGT
ATCCCGCTCTCGCGACGTACGACGACATGAGGTACCCCGCGCTCGTGACG
CGCGTCACCCTGGAGTTCACCGTGGACGAGTGCGGCATCCTGTCGTCCGA
GGTCAAGGACGTCGTGGTTCCTGTCAAGAAATCGAACGACAAGATGAAGC
GGATGCTCAACGCGCTGGCGCTGGTCGCGGCGCTGCTGGCGCTCATCGTT
GGCGGCTACTTCCAGCTGCAGGCACTCGCAGAGAAGCCCGCGAAAGACAT
GGCCAGGGCCAGGGAGAAGCTCACCAAATTCTATGAGGTGGTCAACCCTG
CCAAGCTCACCACTGTGGAGGACACAGTGAAGCGGTGA
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protein sequence of jgi.p|Trimin1|348590

>Trimin1|348590|estExt_Genemark1.C_Ctg_270087 ID=Trimin1|348590|estExt_Genemark1.C_Ctg_270087|Name=jgi.p|Trimin1|348590|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=706bp
MSLATAGVGAGAMPPVMNMPPPMMSGNAVALHQAPPTFGAGAAGCADACC
GAGGAYDLRGQAAADAGPQEDLSACLGVALGATTYSACLYLADKGAVPLT
GRAPLPAALWLDPKTGARGLRKWAKRDSRSGALPKAVTVGLRGEGEAGLL
RVPAGMRLLGARHRPGALLREAAAWPVELVEAARGDDAADDTSGVHICLP
GEAGQEWRACEPEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAP
RVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGGLARGADGGAVAAVR
VGGGGAGAALLRRAAAGALETAAVRGDAGAGGGDMDYLLARALQAALEDA
HGAEAAQEGFKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTK
VSRGELEQAVAPLLERISEMLRDIAAAAAGGAPVRTVVVSGGVALAMPAL
QKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRV
AHPLSGAAAVQAADALPLQISLVTGGGSPEVLFAQGTRLPATTERCFDAA
QGHRAGTEVRAVQTVDAAGSDVTAALVTVADLGDPLNQYDDRGYPALATY
DDMRYPALVTRVTLEFTVDECGILSSEVKDVVVPVKKSNDKMKRMLNALA
LVAALLALIVGGYFQLQALAEKPAKDMARAREKLTKFYEVVNPAKLTTVE
DTVKR*
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mRNA from alignment at Contig_27:785437..794936-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6964 ID=mRNA_6964|Name=jgi.p|Trimin1|348590|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9500bp|location=Sequence derived from alignment at Contig_27:785437..794936- (Tribonema minus UTEX_B_3156 )
CGTTGCAACAAATTGTGGACAGCAAGCCGGCGAAGCGTCTCCAAGCGCGG TCGTGAAACGAGGGTGAGTGGGTTTGTCTCTTGAAGAGCGTAGCTACTCG CATGTCACAGCGCATCCGAAGGTTACTGCTGGATCCGATCTGACTGCTAC TCAGATTGATGTTTGGGTGCTGCCTTGATTGTTTGGTACCGATGGTCTCC ACGGCTCCTGTCCACATGATCACGCCCTTTTGCTGCATGCGCTGCTGTGA TACAGGTGCTTCGACGCCTGAACAATCGGCGGGTCGTTGAAAAGAACACC GGTTGAGAGAGCATGTCGCTTGCGACCGCTGGCGTTGGAGCAGGGGCGAT GCCCCCTGTGATGAATATGCCGCCGCCCATGATGAGCGGCAATGCCGTCG CTCTACACCAGGCTCCGCCGACCTTCGGCGCTGGCGCAGCTGTAAGTTAC AATTTCAAGTGATCCATAGGTTTTGCCTTGTAGAGCGACCTGGCGTATGA AGGCAGTGTGGGTGTCCTCATGATATTGTAGGCACTGATGTGCGGCTGAA AATATCGTTTCAGCTAAAAGGTAACTGTGCGCTTTCACCCTTGCTGTCAA GGTCCACACCGTGCTATGATGCCGCTGCACGCCGCAGTGCACAGATGCCA GCAAGAGTTGCTTCAGCAATATTCATGCCTGAACCTCTGTGCTGGCTCTG CAGGACGTTTTCTCTTCTCCAACCTTGATGCAACAGTAACGTCCCCGAGC AGCTGCGTCCACCCAGGCTCAGCATAACCTGCGCAGTGCATATCCAATCC TGCTCCGCACATCTCCGCGTGCGCACGCGCTCAGGGCTGCGCGGACGCGT GCTGCGGCGCGGGCGGCGCCTACGACTTGCGCGGCCAGGCCGCCGCCGAC GCCGGCCCCCAGGAGGACCTCAGCGCATGCCTCGGCGTCGCGCTCGGCGC CACCACGTACTCCGCGTGCCTGTACCTGGCAGACAAGGGCGCCGTGCCGC TCACCGGGCGTGCGCCGCTGCCCGCGGCGCTGTGGCTCGACCCGAAGACG GGGGCGCGCGGGCTGCGCAAGTGGGCGAAGCGCGACAGCCGCTCCGGCGC GCTGCCGAAGGCGGTGACGGTGGGGCTGCGCGGGGAGGGGGAGGCGGGGC TGCTGCGCGTGCCCGCGGGCATGCGGCTGCTCGGTGCACGGCACCGGCCC GGAGCGCTGCTGCGGGAGGCGGCGGCGTGGCCCGTGGAGCTGGTAGAGGC GGCGCGCGGCGACGACGCCGCCGATGACACCAGGTGCCCCTTGCCGCGGT TCCTAGTGTGATCGTGCCGCAAGGGAGTGTGTGGTAGCGTGCAGGCAGCG GGCAGCTTGTGTGTCAACGTTCTGCGCTTGCGCTGGGGCTGGCGTGACGT CAACTTCAACTTCAAGTGCACAGTGATGTGCCATCTAAGTAGCCCTGCTG ACAGCAGGTAGAAGACGTGGCTCAACGTCTGTAGAGGTGCCTCGCACTCC ACCATCGCCTAGTTCGAGTGTCCTGTGTCACACAGTCAGCATGCCAGACC CCATCGCACGTTTCCATTGGTGAGCGTCTGCAATCTGTGCAGCAGCACCT GCTCCACCCGCTGCGCTGGCCTGCACACGCAGGCCCTCTACCAACGGCTC CCGCTGCTGCCGCCATAGCAGCAATCGCAAATGACAGGTGCTCGTCTGTC CACACTGGCGTACTGTGTACTTTTATCAGACGCGCTGGTCCTGTATGCGC TCGTCGGGCTGGTGTCGCCACATGACTGCCGGAAGCAGCAGGCGACGCAT GTCGCACTGTCGCTTGCAGACGGTACCGTCCTTGCACTCTTCTGATTTGC TACTTTGATTTCATGTTGCCCAGTGGCAGCAACGAACATTGAATCGCCGC AACTGCTGCTGCCCGCATCACCAACTGGGCCATTCGTGTGCCATGCACAC CGAGGTGCTGGCCGTGCACACGGACTCGATCTCAATGAGTGACTCGTCGA CTTACTGATCGCTGCGCGAGCTCACCATGGAGCAGCTGATGCCTGCGTAC AGTGGCAGCCTCATGCGCTTGCCGTCCCCCACTGCACCTCTCTGCCAACA GCTTTTCATAACTTCAAGCTCAGCTAATACATGCGCTGACGAGTGCTGCC TGTGCCACCGCGGCGCGCGACCTATGTTGCGCAGCGGCGTGCACATATGC CTGCCGGGCGAGGCGGGCCAGGAGTGGCGCGCGTGTGAGCCGGAGCACCT GCTGGCGGCGCTGCTGGTGTCGCTGCGCCTGAAGGCCGCCGCCGCCTTCA AGGTGGAGTGCGTCACCTGCAACTTCACGGGTGAGTTGCGGCAGTTGAAG TTGGTCAGCACAGACCCGTTTTGCGGCCACTTCTGCATCTTCAGTATGGG TGTATCGGCGTGTATCCGCGCAAAGGGTGTCTGGCAGCACCCATTTCGCT AAGCATCATACAAGCTGGCTATGTGCGCGTTGGCCGTCGGCTCCCGTAGT GGCGCTGTCCGCACCACACTGGCCGCAGACTGGCAGCTGCACTGCCTGTC ACTGATTGCGCTCGCCGTCTGAGCGCCCATCGCGCACCGCTGCGATCGCA CGCACTGCGCAGCCGGCCATTGTGCGGCGCGCGGGGGACATGACTGATCG CAGCCTCCGCCGAACCCCCCATGAGTTGTGTACAGAGCGCGCGGTGCCCG CGTAGTTTCGCCAAAGACACAGCAGGCGCGGGCGCGGCGGAAACGCTGAC TCGGCCGCCGCGCCTCTATCACGCGCACGCGCTGCAGCGCAGTGCCCTTG TGCTCTGCAGCCGGCCACGGCGCAGCAGGCACACGCGCAGCCGAAACGCT GACTCTGCTGCCGCCCCCCCCATCTTTCCCTCGCGTGCCCGCGCGCGCCG CCGCGCAGTGCCCCTTGTGCTCCGCAGCCGACCGAACTGCTGACCCCGCT GCCGCGCCCCACTCTCTCTCTTTCTCTCTCGCCCGCGTGCCCGCGCGCCG CCATTTCATAATGAATCTGCTATTCAATCTGCCGCCGCCGCCGCGCAGTG CCCGCGTAGTTCGGCGACGCGCTGCGCGTCGCGCTGCAGCGCGCCGTCTT CATCGAACTGCTGACTCTGCTGCCGAGCCTGTCACTTGCGTGCGCATCCC TGCGCCTGCACAGGGCACCCGGCGGAACCGCTGACCCCGCCGCCGCGCCC GTCCCTCTCTCCATCGCGCGCGCCGCTGCTGCCGCGCAGTGCCCGCGTGC TTCGGCGACGCGTCGCGCTGCAGCGCTACTTTCTCTTGCGCATCCCTGCG CCTGCGCATGGCCCTTGTGCTCCGCAGCCGACCACACCGCTGACCCCGCC GCCGCGCCCCCCCCTCTCTCTCTCCGTCCGTCTCTCCCTCGTGCGTGCGC TGGCGCTGCTATTGCGCAGTGCCCACGTGGTTCGGCGACGCGCCGCGCGT CGCGCTGCAGCGCTACCCCCTCTTGCGCATCCCTGCGCCCGCGCATGGCC CTTGTGCTCTGCAGCCTACCACACCGCTGACCCCGCTGCCGTGCCCCCTT CTCTCCCTCTCTCTCTCTCGCGCGCGTGCGCTGGCGCTGCTGTTGCGCAG TGCCCGCGTGGTTCGGCGACGCGCCGCGCGTCGCGCTGCAGCGCGCCGTC TTCCTCGCCGGCATGCGCCCCGCGCGCTTCGTGTCGGCGCCGCTCGCCGC CGCCGTCGGCGCGCTGCACAGCGAAAAGGGCGGACTCGCGCGAGGAGCGG ATGGGGGGGCGGTCGCGGCGGTGCGCGTGGGCGGCGGCGGCGCGGGTGCG GCGCTGCTGCGGCGCGCGGCGGCGGGGGCGCTGGAGACCGCGGCGGTGCG GGGGGACGCGGGGGCGGGGGGGGGCGACATGGACTACCTGCTGGCGCGCG CGCTGCAGGTATGTAGGTATGATGGGGTGGGGTAACAGGGGGGGGGGTGT GGTGGGAGGGCCGAAGGTGCGGCTGCTGAGTTCAAATATTTGCGGCAATG CAGGAGGGGGGGGGGGGGGGAGGGGGTAAGGGAGGGCTTGAAAGCTGCTT AGCAAGAACAGCGGCGGCTGTACAAGTGAGAGAAGGGGCGAGGGATGACT TGAAATGCGCGCAGGTGCCATCTGTCGACCTGCGATGACCCGCGTGCAAA AGTGCGGCTAGCATTGGTCCTGCATATCTGCAAGCGTAGACGCCTGAAAC CGTGACAGCGTTGCAATTGCTGCGAGTGGTTTTTGCCGGCTGCGGTGGTT CATGCCGGCAGGCCCAAGCACTGTTTGTGTGCGTGGGGGGGTGGAGTGGG GGGGTTATGATGATGAGCAGCGAAGCGTGCGCGTGTTTCACGGATGAGAG CAATCTGACTTACGCGCTGCCGAGTTTCGCAGTCCTCGTGATCAGCACCT GGTTGAACTTGAAGTTGATCAGGCCAGCGCTGAAGGGGAGGGGGGGGCGG CAGGCAAAAATGCATACTTTTGCAGCGTCACCTCGGTGCCTGACTGTTCT TATCAGAAAAAGTACTGTACTCAACTGCATGCTCACTGTGCTCTACACAT GGCAGGCGGCGCTCGAAGATGCGCACGGCGCGGAAGCGGCGCAGGAGGGG TTCAAGGCTCTCGTAGCGGCAGCACGCAGCGCGCGCGAGGCGCTGTCCGA AGAGGCAGAGGCCACGGTTCACCTGCCAGCGGGGTCGCTGCCGTCGCAGC CGGAGGTGGAGTTCACGACAAAGGTGTCCAGGGGGGAGCTGGAGCAGGCA GTGGCGCCGCTGCTGGAAAGGTGTGCAATTGCACATATTTTAGGATTGTT TCACAAGGCGCTGGGTAGACTACGATAGAGTCTTGTTTGTGAAGCATTGC AGTGCGAGGGATTGGTTGAATTTGCCACTTGTGAAGTGTAAGTTGAAGTG TCGTTGCGTGCGGCGATATGGCGGGCGGCGGCGCTGCCCCAAAGGGTGCG CTTGCATGTCATTCTTCGGGGACCATTGGGAAGCAACAGAACCAATTGAT GTTGATGTGGTCTTTCGAGGTGTGTGCATCTGGAGCACATTGCGCCGCAT GAGCCGCCTTCGTGACCGTCACTGATGGCACCGCTCATGCGCTGCTGCCT GCTACCACGACGTGCCTTTACCACACCAACGCCTTGCTTCCTCAGCTGCG CCCTCACCGGCCCGCAATATGCGTCGATCCGTGACCAATCATCAACCTCA ACCGACAACTTCCGCCCCTCCCCTGCGCACCACCTCTCCCTCAGAATATC AGAGATGCTCAGGGACATCGCGGCGGCAGCAGCTGGCGGCGCGCCGGTGC GCACCGTCGTCGTCAGCGGCGGCGTCGCGCTGGCGATGCCGGCGCTGCAG AAGGCCGTCGCCGCGGCGTTCCCAAAGGCGGAGGTCACGCGCACGGACGG CACGGAGGCGGCGCGCGGCGCGGCGCTGCTGCTGGCTAGCGAGCGCGGCG TCCTCAGGTGCGACGCGACGCGCAGCGCAGCGCGGGCGCGGTGGGTCTCT CTCTGTCACGCGCTGTAGAGCGCTGCCCCCGCCCTCTCGGCGAGGGGGGT CGATGCACTGGCAAAGGCGCGTGGGCTCCGCGTGGCGCATCCGCTGTCGT GCGCATGCGCAGTGCTCGGAAATTACATGCGGCCGACCGGCGATCGCGGC GTCGTGAGGGTGCTACGCGTTTCGCAGCGCGGGCCGGTCCTGCGATGTGC ACGTTGCGAGCGCCGTGTCTCTCCTTGGGCTTTTGGGCGGGGAGGGACAG AGGGGGGCGATGCGTGCTTGCGCACCACAGGGCGCAGATCCCGAAGGACG TCGGAACCCACTCAACGGGCTTGAGCACACTGTGGCTGGCCGCCATTGCT GGCTGAGAGCGCTTGTCGTTGTGGTAGAATGCGCGTAATCATGCGGATGC ATCGCCCCGGGGCGCGCTCGTGTGTCTCGTAACAGTGTCATCGATGTTGC ACGCCAGCCAGGGAGGGGCAGGCATAAGTGCACGTGACACTGCAAGTCCT CACTGCAACTTCAACGTCAAGGTCGCACACACCCGGCACGCCTGGCCATG TCTGAGGTAGCTGGCGTTTCGCTCGCTTTGCGGGTGTCGCTCGAGGTACG GGCAGTTGCGCACGATGCGCCCCAGTGTTTAGGCTGCTGTAGCTGCCTTC AACTTCAAGGCGGTGAGTGGCATCATTGGCATCAGTGCCCTGCCTGTACG CATCTCGCACATCACTTTTGCGCACGAAGGCGTGTGTCAATTGCAAGTTG ACGGCGCTGCTGCTGCCGCCAGGGCAAACTCGCCGATGATGATGACGCTC AGCATAGCTCTTGCTCTCCGTTGGTTGTTTGCGCTCGCGCTGCAGCGGCG CGGCGGCGGTGCAGGCGGCGGACGCGCTGCCTCTGCAGATCAGCCTGGTC ACGGGCGGCGGCAGTCCGGAGGTGCTGTTCGCGCAGGGCACGAGGTGAGA CGGCGCCGATGCACGCATGGATTTGTTTGCATTAGCAAAATGTATTGCTG TCCGCCCTCACGAGAAGAGCCTGTTTCAACCTGTACATGTATCAGAGTAG CTGCAGTTTCCCTATGTAGGTAGCGCCAAAGGCTGCGGATGCCTTGTTTT TGCGCACCTGCGTCGGTGGGAGCATTCAACATGTGCTGCTCACACTACAA TTATCTCAAGGTTAGGGTTTAGTGTTAGAATTATGCGCCACCACTACGAT GCTCACTCTATCAAGGTGATTATCGCGCCCCGGAACCGTGCCGTCGGGTC TGCCTGCACGCACACTCATTCTACGCCATTCAAATGTCCACACTTCATCA CATCGCTGCACCTACGGTTTGCCCACACGCGCTTCTCACTCCACGCCATC CCCACGTCTTTGGTTCATCGCACTGCTGTGCCTACGCGCTGCCATCAGGC TGCCATCCATTCACATGTCCACAACAATGAGGACAGAATTGCTTTGATTA AAGACGGCTCGGATTATTCCTACAATTTTTTTCTTTGTTGAATGACGATT AACACCCGCTGATCGATTGTCAACACTTGTGCTACATTAAGTATCCTTCG TCCTTCTCACTGCTGCATTGCGTCGCGCCGCCACCAGGCTGCCAGCCACA ACTGAGCGCTGCTTTGATGCAGCGCAGGGCCACCGCGCCGGCACGGAGGT GCGCGCCGTGCAGACGGTGGACGCCGCGGGGTCAGATGTAACTGCCGCAC TCGTAACTGTCGCCGACCTCGGCGACCCTCTGAACCAGTACGACGACAGG GGGTATCCCGCTCTCGCGACGGTGAGTCGTGGCACCAAAAGCGCGTGCAT CGCCACAGGAGGTTACCACTTTCGTATTGTTTCATGGTGAAGTTGCACGG CGGGGTGGGACAGCGCTCCGCTTGTAACTGTCGCGGCCCTTGGCAACCCC CTGAGCCAGTACGACGACATGAGGTACCCCGCGCTCGTGACGGTGAGTCG TAGCGACAGGCGCGTGCGTCGCCACTAAAGTTCCCATGTTGCTTCATGTT GAAGTTGCACAACCTTGTTGCGCCCCTCATGACGGCAAATCCCAATGCAC AAGATTGTCTTTTGTGAGTTGTGCAGCTGCGTGTCTTTTGCAGTCGATGT CAAGGGCGGGGCCGCCGCCGCTGCTGACCTGAGTGACCCCCTGAATCAGA ACAATGGCCGAGTCTATGAACCTGTGAGGAAGGCAATGCGTACTGTTGTG CAGTGTGGTGTGCGCACAAATCGAACATGTGGCTGTGGTGGTTCTGCACG CACCAACGACTTTGCTCGCCGCATCACATGTGCTCATGCTGCTCTCCGTG CTCGCGACGCTGATGACACGACTGCGGCGGTGGTGCAGCGCTCACCGCCG CATAATGGCGATAATCTACGTGTTCATGTGTATGAAGCGAGCCTGGCAGC GCATGCTGCAGCACAACAGCAACACAATTGCCAGGCGCGCTCAGCGCTTC CTGTACCAGACTCTGGGCGACAGGCAGCAGTACAACGCATGTGGACAGAG CGCATGCCGCGTGATGCGCTGCGCGCTGATGTTGCATCGCTCATCCTGTC GAGCGCTGCTGCTGCTGTGTCTGTCCCGCAGCGCGTCACCCTGGAGTTCA CCGTGGACGAGTGCGGCATCCTGTCGTCCGAGGTCAAGGACGTCGTGGTT CCTGTCAAGTGAGTCACGATTTGATGAGTCGTGAGTCATTGATTCACGAG GTGTCAAGTGGCCAGATCCGTTTTCGAGCCGTCTCCAATGCCCTGCGCCA TACACACTCGCCAACAAATCATCACGAGAAGGCATGTGGACGCGTTGTGG CTGTGTGAAACAATGACTGTATTATATATTGCATCAGTGACGTCATTCAG GACAGGCTAGTGTTGAGCGTTGATTATGTTGTGGCTGTTTAAAGAGTATT GGAATATTGGTGATTGAAGCAACGATGTCATTTATGACAGGCTCATGTTA CATATGATCAGTCGTGTACATGGTCGTCTGTGCCCTTCGGTAGGTGCGAG TGCGCAGGCTTACGCTACCCCACCCAACCGCGCGCCTTGCACTGTTGCAC CATTTCTGACGCGCGCGCGCTGCCGCCGCCGCGGCAGGCAACCAACCAGC ATGATCACTGCAGAGTCTCATTTCAGCGCTCAGAGTATTGTGGCAGCGCT CAGAGTCTTGTGGCACTGCTCAGAGTATTGTGACAGCGCTCATATGTGCG TGCGCGCCGCGCTGCTGGTGCCGCTGCTGCTGCCGCGGCAGGAAATCGAA CGACAAGATGAAGCGGATGCTCAACGCGCTGGCGCTGGTCGCGGCGCTGC TGGCGCTCATCGTTGGCGGCTACTTCCAGCTGCAGGCACTCGCAGAGAAG CCCGCGAAAGACATGGCCAGGGCCAGGTGGGACGCGCGGCGTCACCGCTT GAAGTTACTGCTTGAAGTCTTGTTTCACTTACATAACTGCAACAAAGCAA TTAACGGGAGGTAGATGATTTTTTGCATATTGCTGCTGTGATAACTCCCT GTGTCGAAATGTCGAGGCTCGTTCGTAGATGCCCCTATGGCACCAGTCGG CCATCATCTGGGCAGCCTTGGGATTTCGGGTCCGTGCGTGATGGTGCGAT ACGATCTTGAACTTGCGTACTGCACCTGTTTGCTGCCTTCATGGTAAAGC AGCTGATTTGCGAGATGGGCCAGGTATCTGTGCTCTTTGAGCACTGCTTG AGGCCGCCATGCTACAGAATAGCTTGTGTTCAAGCCCCTTGCACTACGGG GGTTCACTCCAGTAGGTCTGCAGCGAAAAACCAGGTGACGGTTCTGTATC AGGCGACGGTGTTTTTCCTGTGCGGCATGTAGGTTGGGTTGCAGAGCCCC CTCTTGTCCCCCGTCCCAGAAGTCCCCGCTCCCCTTTCATTCTTGTGTAC ATTCGTTTTTCTCTCCGCAAACAGGGAGAAGCTCACCAAATTCTATGAGG TGGTCAACCCTGCCAAGCTCACCACTGTGGAGGACACAGTGAAGCGGTGA
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Coding sequence (CDS) from alignment at Contig_27:785437..794936-

>mRNA_6964 ID=mRNA_6964|Name=jgi.p|Trimin1|348590|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2118bp|location=Sequence derived from alignment at Contig_27:785437..794936- (Tribonema minus UTEX_B_3156 )
ATGTCGCTTGCGACCGCTGGCGTTGGAGCAGGGGCGATGCCCCCTGTGAT
GAATATGCCGCCGCCCATGATGAGCGGCAATGCCGTCGCTCTACACCAGG
CTCCGCCGACCTTCGGCGCTGGCGCAGCTGGCTGCGCGGACGCGTGCTGC
GGCGCGGGCGGCGCCTACGACTTGCGCGGCCAGGCCGCCGCCGACGCCGG
CCCCCAGGAGGACCTCAGCGCATGCCTCGGCGTCGCGCTCGGCGCCACCA
CGTACTCCGCGTGCCTGTACCTGGCAGACAAGGGCGCCGTGCCGCTCACC
GGGCGTGCGCCGCTGCCCGCGGCGCTGTGGCTCGACCCGAAGACGGGGGC
GCGCGGGCTGCGCAAGTGGGCGAAGCGCGACAGCCGCTCCGGCGCGCTGC
CGAAGGCGGTGACGGTGGGGCTGCGCGGGGAGGGGGAGGCGGGGCTGCTG
CGCGTGCCCGCGGGCATGCGGCTGCTCGGTGCACGGCACCGGCCCGGAGC
GCTGCTGCGGGAGGCGGCGGCGTGGCCCGTGGAGCTGGTAGAGGCGGCGC
GCGGCGACGACGCCGCCGATGACACCAGCGGCGTGCACATATGCCTGCCG
GGCGAGGCGGGCCAGGAGTGGCGCGCGTGTGAGCCGGAGCACCTGCTGGC
GGCGCTGCTGGTGTCGCTGCGCCTGAAGGCCGCCGCCGCCTTCAAGGTGG
AGTGCGTCACCTGCAACTTCACGGTGCCCGCGTGGTTCGGCGACGCGCCG
CGCGTCGCGCTGCAGCGCGCCGTCTTCCTCGCCGGCATGCGCCCCGCGCG
CTTCGTGTCGGCGCCGCTCGCCGCCGCCGTCGGCGCGCTGCACAGCGAAA
AGGGCGGACTCGCGCGAGGAGCGGATGGGGGGGCGGTCGCGGCGGTGCGC
GTGGGCGGCGGCGGCGCGGGTGCGGCGCTGCTGCGGCGCGCGGCGGCGGG
GGCGCTGGAGACCGCGGCGGTGCGGGGGGACGCGGGGGCGGGGGGGGGCG
ACATGGACTACCTGCTGGCGCGCGCGCTGCAGGCGGCGCTCGAAGATGCG
CACGGCGCGGAAGCGGCGCAGGAGGGGTTCAAGGCTCTCGTAGCGGCAGC
ACGCAGCGCGCGCGAGGCGCTGTCCGAAGAGGCAGAGGCCACGGTTCACC
TGCCAGCGGGGTCGCTGCCGTCGCAGCCGGAGGTGGAGTTCACGACAAAG
GTGTCCAGGGGGGAGCTGGAGCAGGCAGTGGCGCCGCTGCTGGAAAGAAT
ATCAGAGATGCTCAGGGACATCGCGGCGGCAGCAGCTGGCGGCGCGCCGG
TGCGCACCGTCGTCGTCAGCGGCGGCGTCGCGCTGGCGATGCCGGCGCTG
CAGAAGGCCGTCGCCGCGGCGTTCCCAAAGGCGGAGGTCACGCGCACGGA
CGGCACGGAGGCGGCGCGCGGCGCGGCGCTGCTGCTGGCTAGCGAGCGCG
GCGTCCTCAGGGGGGTCGATGCACTGGCAAAGGCGCGTGGGCTCCGCGTG
GCGCATCCGCTGTCCGGCGCGGCGGCGGTGCAGGCGGCGGACGCGCTGCC
TCTGCAGATCAGCCTGGTCACGGGCGGCGGCAGTCCGGAGGTGCTGTTCG
CGCAGGGCACGAGGCTGCCAGCCACAACTGAGCGCTGCTTTGATGCAGCG
CAGGGCCACCGCGCCGGCACGGAGGTGCGCGCCGTGCAGACGGTGGACGC
CGCGGGGTCAGATGTAACTGCCGCACTCGTAACTGTCGCCGACCTCGGCG
ACCCTCTGAACCAGTACGACGACAGGGGGTATCCCGCTCTCGCGACGTAC
GACGACATGAGGTACCCCGCGCTCGTGACGCGCGTCACCCTGGAGTTCAC
CGTGGACGAGTGCGGCATCCTGTCGTCCGAGGTCAAGGACGTCGTGGTTC
CTGTCAAGAAATCGAACGACAAGATGAAGCGGATGCTCAACGCGCTGGCG
CTGGTCGCGGCGCTGCTGGCGCTCATCGTTGGCGGCTACTTCCAGCTGCA
GGCACTCGCAGAGAAGCCCGCGAAAGACATGGCCAGGGCCAGGGAGAAGC
TCACCAAATTCTATGAGGTGGTCAACCCTGCCAAGCTCACCACTGTGGAG
GACACAGTGAAGCGGTGA
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