mRNA_695 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157098
Unique NamemRNA_695
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A836CH47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH47_9STRA)

HSP 1 Score: 675 bits (1741), Expect = 2.390e-245
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1
Query:    1 MIDDQGSLTVVWNVECDPEIFHFLVSLGEDEDGKQDVIRSIADCDGESTWIVSLKADARDEYEPRDVQRILHEPDQDIAALSSIVENGDVYHHDGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANFYN 996
            MIDDQGSLTVVWNVECDPEIFHFLVSLGEDEDGKQDVIRSIADCDGESTWIVSLKADARDEYEPRDVQRILHEPDQDIAALSSIVENGDVYHHDGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANFYN
Sbjct:    1 MIDDQGSLTVVWNVECDPEIFHFLVSLGEDEDGKQDVIRSIADCDGESTWIVSLKADARDEYEPRDVQRILHEPDQDIAALSSIVENGDVYHHDGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANFYN 332          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A835Z926_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z926_9STRA)

HSP 1 Score: 342 bits (876), Expect = 3.100e-115
Identity = 163/230 (70.87%), Postives = 193/230 (83.91%), Query Frame = 1
Query:  280 DGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCS-GEVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRE 966
            +G V L SGRRLDDGSVIRVLFAYTTPTRDRWG STI SMIVG +ASANQALSNSG GFKI AA IMH  W++D+ GH+ +L+AL+ GE+PGI AARKLYKADLVQ+VIDN +YCG+G+LM + SSSF +YA+SV++GGC+AQ SH+HEIGHN+GARHD  ++ AS TWPYA+G+RYC  G+   PYFR+VMSYSC GA RVPYFSSP  +YQG  TG  GADNARVLR+
Sbjct:    2 NGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLRQ 231          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A836C7N3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N3_9STRA)

HSP 1 Score: 336 bits (862), Expect = 7.470e-108
Identity = 190/449 (42.32%), Postives = 246/449 (54.79%), Query Frame = 1
Query:    7 DDQGSLTVVWNVECDPEIFHFLVSLGEDEDGKQDVIRSIADCDGESTWIVSLKADARDEYEPRDVQRILH----------------------------------------------------------------------------------------EP------DQDIAALSSIVENG----DVYHH--------DGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCG---------------FGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANF 990
            D  G++TVVWN ECDP++FH L +LGED DG+++ +R++   DG  TW+ +LKAD R+EYE +  +R++H                                                                                        +P      D DI  L  + E      DV+H         +GAV++PSGRRLDDGS++RVLFAYT  +R RWG +T++SMIVG +ASANQ LSNSG+GFKI AA IM   +   + G VAALN L  G + G+ AAR+ YKADLVQ+VI+ + YCG               +G++M S SS F  +A+SVVY GC++ +SHIHE+GHNMGA+HD  N+     W Y  GYRYCSGE   P+FRSVMSY+C  A RVPYFSSP VYY+GR TG  GADN RVL+  +Y VANF
Sbjct:  168 DATGAVTVVWNDECDPQVFHLLAALGEDADGRRNTLRTVPCADGACTWLAALKADVREEYEGK--RRLVHVARXXXXXXXXSAYLRTAAAPLPXXXXSAAHGLEAAAALNTNERAPERRAIACRDCSHSCLILRRPRPRRDTRXXXXXXXXXXXXXXXDPEAAAALDADIELLRLMSEGDGDAHDVFHRAGGRRLEGEGAVVMPSGRRLDDGSIVRVLFAYTPASRARWGAATLKSMIVGGVASANQVLSNSGLGFKIEAAAIMATTYTEPDGGFVAALNDLDDGNVTGVNAARETYKADLVQLVINTSDYCGSNCTNCSAVCAAYGRYGNIMTSTSSDFAPWAHSVVYNGCYSSYSHIHEMGHNMGAQHDAANSQDVTDWSYGEGYRYCSGETSQPWFRSVMSYNCGAAPRVPYFSSPNVYYKGRATGTAGADNVRVLKANRYTVANF 614          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A836CMI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI7_9STRA)

HSP 1 Score: 313 bits (803), Expect = 2.590e-97
Identity = 166/357 (46.50%), Postives = 226/357 (63.31%), Query Frame = 1
Query:    1 MIDDQGSLTVVWNVECDPEIFHFLVSLGEDEDGKQDVIRSIADCDGEST----WIVSLKADARDEYEP---RDVQRIL-------HEPDQDIAALSSIVE-NGDVYHH-----------DGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDP-PYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANF 990
            + +  G ++VVW+  CDP +F   V+L  D DG +  I SI   +  S     W+ ++  + RDE++    R ++ ++        + D D+  L  +++ NGD + H            G V++PSGRRLDDGS +RVL+ Y+   RDRW   TI S I   +A+ANQAL+NSGV F++ AA IMHV+  YD+  H+ AL AL+ G + GI  AR  Y ADLVQ+VI++++YCG+G+L+ S SSSF  Y +SVVY  C   +SHIHEIGHNMG +H+  N+  +  W Y +GYRYC+  V   PY+RSVMSY+CTGA RVPYFSSP V YQGR TG+  ADN RVL +T Y VANF
Sbjct:  109 LTEQVGFVSVVWDDACDPRVFQLDVTLASDNDGHRHTITSIPCSEATSVPSCVWMAAVATEMRDEFDVFDRRHLESVMASHTQDHQDLDDDVELLQQLMDGNGDAHDHFVKNGGRRLEEAGQVVMPSGRRLDDGSTVRVLWLYSNRVRDRWTDDTITSKIAAGVATANQALANSGVSFRVKAAAIMHVD--YDDTTHMEALAALNTGSIAGINTARDKYSADLVQMVIESSEYCGYGNLLYSASSSFAPYGFSVVYSDCIVSYSHIHEIGHNMGCQHNAENSGDATMWSYGVGYRYCNDGVSKSPYYRSVMSYACTGATRVPYFSSPDVEYQGRTTGLDTADNVRVLEQTHYTVANF 463          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A835YK21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK21_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.480e-89
Identity = 164/372 (44.09%), Postives = 219/372 (58.87%), Query Frame = 1
Query:    1 MIDDQGSLTVVWNVECDPEIFHFLVSLGEDEDGKQDVIRSI-----ADCDGESTWIVSLKADARDEYEPRDVQRILHEP--------------DQDIAALSSIV------------ENGDVYHHDGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPG---------IAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCS-GEVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQG-ADNARVLRETKYIVANF 990
            ++   G + +VW+  C P +F   V L +  D  + VI S+          + TW+ +++ D R+EY   D  R + E               D+D+A L  ++              G   H +GAV++PSGRRLDDGSV+RVL+ YT   RDRW  +TI S IV  + SANQAL NS  GF++ AA I  +N +YD+  HV +L+ LS   +P          +   R  Y+ADLVQ++I+  +YCG+G+L+ S SSSF  Y YSVVY  C A +SHIHEIGHNMG +H+V N+  +  WPY  GYRYC+ G    PYFR++MSY+CTGA RVPYFSSP +YYQG  TG    ADN RVL +TKY VANF
Sbjct:  186 LVGQVGFVNIVWDDACSPSVFQLDVHLEDGADNTRRVITSVPCSPSTATSKQCTWLATVETDLREEYHEED--RRMWEKLAAAEAPNPDRDAFDKDLALLQQMLTGDSAATEVFARSGGRRLHEEGAVLMPSGRRLDDGSVVRVLWLYTNRVRDRWTDATITSKIVSGVVSANQALINSNAGFQLEAAAI--INIDYDDVSHVQSLSDLSYSAIPXXXXXXXXXXVTFLRDFYRADLVQMIIEAPEYCGYGNLLSSASSSFASYGYSVVYSDCIASYSHIHEIGHNMGCQHNVENSGQTTVWPYGDGYRYCNDGVTQAPYFRTIMSYACTGATRVPYFSSPNIYYQGVATGTAATADNLRVLLQTKYTVANF 553          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A835YSD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD2_9STRA)

HSP 1 Score: 219 bits (559), Expect = 5.510e-61
Identity = 120/258 (46.51%), Postives = 155/258 (60.08%), Query Frame = 1
Query:  280 DGAVILPSGRRLDDGSVIRVLFAYTTPTRD---------------RWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVG----NTDASATWPYAMGYRYCSGEVDPPYFRSVMSYSCTG--AMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANF 990
            DG VI+PSGRRLDDGS++ +++ Y T T                 +WG S + SM    + SANQ L NSGVGF+     +M+ N+  DN    A  + L+ G +PG+AAAR  Y ADL+Q++ ++  YCG G LM   S SF +Y  S V+  CF   SHIHEIGHNMG  HD+G    N  A + WPY+ GYRYCS     P FR+VM+Y+CT   A R+PYFSSP VYY G  TG    DN R L+++K  V+NF
Sbjct:  315 DGTVIMPSGRRLDDGSIVTLMYIYGTYTNAXXXXXXXXXXXXXXAKWG-SQVPSMAAAGVTSANQVLVNSGVGFQFQLVNLMYSNYA-DNNMDQATTDMLA-GTVPGVAAARNTYGADLIQMMTEDTAYCGLGWLMTDKSPSFEKYGNSAVFNDCFMNLSHIHEIGHNMGCHHDIGTDGANAAAGSLWPYSFGYRYCSA----PNFRTVMAYACTSGSASRMPYFSSPNVYYMGYPTGTDIEDNVRTLKDSKLTVSNF 565          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A835YS29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS29_9STRA)

HSP 1 Score: 218 bits (556), Expect = 8.790e-61
Identity = 119/263 (45.25%), Postives = 158/263 (60.08%), Query Frame = 1
Query:  229 DIAALSSIVENGD-VYHHDGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQ--FSHIHEIGHNMGARHDVG----NTDASATWPYAMGYRYCSGEVDPPYFRSVMSYSCTG--AMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANF 990
            D+ AL+    NG      DG VI+PSGRRLDDGS++ +++ Y T T  RWG S + SM+   + SANQ L NSG+GF+     +M+ N  Y +   +  +  L+ G +PG AAAR  Y ADLVQ++ ++  YCG G LM    + F +Y +S V   CF     +H HEIGHNMG  HD+G    N  A + WPY+ GYRYCS     P FR+VM+YSCT   A R PY+SSP VY+ G  TG    DN R L+++K  V+NF
Sbjct:  268 DVEALNHFNRNGGRSLGSDGTVIMPSGRRLDDGSIVTLMYVYGTYTTARWG-SQVPSMVAAGVTSANQVLVNSGIGFQFQLVNLMYSN--YADNDMLQGITDLANGVVPGAAAARNTYGADLVQMMTEDPNYCGIGWLMTGKDAWFEKYGHSAVLNDCFTPTGLTHAHEIGHNMGCHHDMGTDGANGAAGSLWPYSFGYRYCSA----PNFRTVMAYSCTSGSASRAPYYSSPNVYFMGYPTGTIYEDNVRTLKDSKLTVSNF 523          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A836C8G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G9_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.010e-58
Identity = 117/271 (43.17%), Postives = 167/271 (61.62%), Query Frame = 1
Query:  223 DQDIAALSSIVENGDVYHHDG-------AVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCF--AQFSHIHEIGHNMGARHDVGNTDASAT----WPYAMGYRYCSGEVDPPYFRSVMSYSCTG--AMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANF 990
            D DI  ++S V + D     G       AV++PSGRRLDDG+V+RV++ Y   +  RWG S I SM+  A+ SAN  LSNS  G ++  A +++ N+N D + + AALNA+  G +PG  AAR  Y ADL+Q++ ++ +YCG G ++ S +++  +Y  S V   C   + ++HIHEIGHN+GA HDV    AS+     WPY+ GYRYCS     P FR++M+Y+C    + R+PYFSSP + Y G  TG    DNAR LR ++  VAN+
Sbjct:  342 DDDIKLMASTVGDDDFERSGGRRLERENAVVMPSGRRLDDGTVVRVMYIYGNASGSRWGGSQIYSMVAAAITSANLVLSNSNAGVQLELATLLYSNYN-DTDMY-AALNAMVAGTVPGANAARDAYSADLMQMLTEDPRYCGLGWVLNSATNANSKYGNSAVQVLCLGSSNWAHIHEIGHNLGAHHDVSTDGASSATGSDWPYSFGYRYCS----TPNFRTIMAYTCNPNTSPRIPYFSSPLITYNGYPTGTATEDNARTLRSSRTAVANY 606          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A835YJ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ94_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.360e-52
Identity = 134/373 (35.92%), Postives = 194/373 (52.01%), Query Frame = 1
Query:   10 DQGSLTVVWNVECDPEIFHFLVSLGE---DEDGKQDVIR--------------SIADCDGESTWIVSLKADARDEYEPRDV---QRILHEP----------DQDIAALSSIV--ENGDVYHH----------DGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHD---VGNTDASATWP-YAMGYRYCSG-EVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVAN 987
            D G++TVVWN  CDP +F+  V+L     D    Q ++                I +C     W+  ++    +EY+  D    +R L +P          + DIA L+++   ++G   H           +GAV++PSGRRLDDG+ +RVL+AY    ++   +S I SM+   +ASANQALSNS  GF+I  A +M   +N  ++G + A   L  G +  +   R+   ADLVQ +  + +YCG+G ++ + +++  +   S V   CFA +S IHEIGHNMG  HD   VG    S+ W  YA GYR C G     PYFR+VM+Y+C+ A RV YFSSP V Y     G   A+NA+      Y  AN
Sbjct:   67 DTGTVTVVWNERCDPGVFYLDVALSTQVPDNSPAQGILAVRTALTALPCAPGSGIDNC----VWVAEVETKLPEEYDGPDAGVGRRQLQQPHFNATGLQGLNADIALLAAVHGGDSGARAHFRRNGGRRLAAEGAVMMPSGRRLDDGTKVRVLWAYNNVVKNMT-ESAIASMVAAGVASANQALSNSHAGFQIELAGLMRSTYNDVDQGSIIA--NLRDGVIADVKQKREEVAADLVQWISHDKKYCGYGFVLYNLTTADSKRGVSSVLFTCFAGYSQIHEIGHNMGCDHDSANVGGDHTSSQWASYAYGYRRCGGGSTSAPYFRTVMAYTCSRAPRVAYFSSPDVKYSSTAVGTSTANNAKPHSNPHYKSAN 432          
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Match: A0A835YTT5_9STRA (Chitin-binding type-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.990e-47
Identity = 104/270 (38.52%), Postives = 146/270 (54.07%), Query Frame = 1
Query:  205 RILHEPDQDIAALSSIVENGDVYHH-DGAVILPSGRRLDDGSVIRVLFAYTTPTRD-RWGQSTIRSMIVGALASANQALSNSGVGFKIAAARI-MHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCF--AQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSY---SCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANF 990
            R L   D  I AL+ +   G  +    G+V++PSGRRLD GSV+RVL+AYT        G + + ++I GA  SANQ L+NSG+ F + AA   +    +  ++GH  AL A +   +P + +     K D+VQ+VIDN  YCG G +M S ++ F   AYS V+ GC   +  +HIHE+GHN G  HD  +   +  WPY  GYR C         +SVM+Y   +C G   VP FS+PT  + G   G    DN RV +     ++NF
Sbjct:   33 RRLTSGDAGIDALAELERAGGEFDEFTGSVLMPSGRRLDAGSVVRVLWAYTPRVETLAGGAARVATIINGAFTSANQVLTNSGLPFILEAAYFKVSYTESTASDGHSGALTAAATNVIPSLWSVHDSGKYDIVQLVIDNGYYCGLGYVMSSATTGFAPSAYSTVHWGCMDTSNLAHIHEMGHNFGGLHDRASNTLTTAWPYGYGYRSCPSATAER-VKSVMAYWSPNCPGQYNVPVFSTPTRAWSGYAMGDANTDNVRVFKANAVTISNF 301          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157098 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH47_9STRA2.390e-245100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z926_9STRA3.100e-11570.87Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836C7N3_9STRA7.470e-10842.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMI7_9STRA2.590e-9746.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK21_9STRA2.480e-8944.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSD2_9STRA5.510e-6146.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YS29_9STRA8.790e-6145.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8G9_9STRA2.010e-5843.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJ94_9STRA2.360e-5235.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTT5_9STRA6.990e-4738.52Chitin-binding type-1 domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1154417..1155415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157098|e_gw1.2.340.1
DescriptionMetallo-peptidase family M12B Reprolysin-like
COG categoryS
Max annot lvl28221|Deltaproteobacteria
EggNOG OGsCOG3291@1|root,COG3291@2|Bacteria,1PHGX@1224|Proteobacteria,437VV@68525|delta/epsilon subdivisions,2X1BB@28221|Deltaproteobacteria,2MEPR@213115|Desulfovibrionales
Evalue7.08e-36
Seed ortholog1304872.JAGC01000003_gene3276
Hectar predicted targeting categoryother localisation
TranscriptId157420
TrackFilteredModels1
ProteinId157098
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157098gene_695Tribonema minus UTEX_B_3156 geneContig_2 1154417..1155415 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_695_1exon_695_1Tribonema minus UTEX_B_3156 exonContig_2 1154417..1155415 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_695CDS_695Tribonema minus UTEX_B_3156 CDSContig_2 1154417..1155415 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157098Trimin1|157098|e_gw1.2.340.1Tribonema minus UTEX_B_3156 polypeptideContig_2 1154417..1155415 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_695 ID=mRNA_695|Name=jgi.p|Trimin1|157098|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=999bp|location=Sequence derived from alignment at Contig_2:1154417..1155415- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATAGACGACCAAGGATCACTCACTGTTGTATGGAACGTGGAGTGTGA
TCCTGAAATATTTCATTTTCTGGTGTCACTCGGTGAAGATGAGGACGGTA
AGCAGGATGTCATAAGGTCGATCGCCGACTGCGATGGCGAGAGTACGTGG
ATTGTGTCTCTGAAGGCGGACGCGCGAGACGAGTACGAGCCCCGCGACGT
TCAACGGATTTTACATGAGCCAGACCAGGACATTGCGGCCCTGTCTTCCA
TAGTCGAAAATGGTGATGTGTATCACCATGACGGCGCTGTTATACTTCCA
AGTGGACGGAGACTGGATGATGGCTCGGTGATACGTGTCCTGTTTGCCTA
CACTACGCCAACGAGAGACAGGTGGGGGCAATCTACGATACGGAGCATGA
TTGTAGGTGCTCTCGCGAGTGCAAACCAGGCGCTTTCAAACAGTGGTGTC
GGTTTCAAGATTGCTGCTGCGCGGATCATGCATGTGAACTGGAACTATGA
CAATGAAGGGCATGTCGCTGCGCTAAACGCCCTCAGCCAGGGCGAAATGC
CAGGCATTGCAGCTGCTCGCAAATTGTATAAGGCCGACTTGGTGCAGGTT
GTAATTGATAATGCGCAGTACTGTGGATTTGGCAGTCTCATGCAGTCCCC
ATCGTCTTCCTTCAGGGAGTACGCTTACTCAGTAGTGTACGGTGGTTGCT
TTGCGCAGTTTTCACACATTCACGAGATTGGCCACAACATGGGTGCTAGA
CACGATGTTGGGAACACCGACGCATCAGCTACTTGGCCTTATGCCATGGG
CTACCGCTACTGCAGTGGAGAAGTCGATCCGCCGTACTTTCGCTCTGTCA
TGTCTTACTCTTGTACCGGCGCAATGCGCGTACCTTACTTCTCTTCGCCG
ACCGTGTACTATCAAGGTAGGCAGACAGGCATGCAAGGTGCAGACAATGC
GAGGGTTCTGCGTGAGACAAAGTATATCGTAGCCAATTTCTACAATTGA
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protein sequence of jgi.p|Trimin1|157098

>Trimin1|157098|e_gw1.2.340.1 ID=Trimin1|157098|e_gw1.2.340.1|Name=jgi.p|Trimin1|157098|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=333bp
MIDDQGSLTVVWNVECDPEIFHFLVSLGEDEDGKQDVIRSIADCDGESTW
IVSLKADARDEYEPRDVQRILHEPDQDIAALSSIVENGDVYHHDGAVILP
SGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGV
GFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQV
VIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGAR
HDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSYSCTGAMRVPYFSSP
TVYYQGRQTGMQGADNARVLRETKYIVANFYN*
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mRNA from alignment at Contig_2:1154417..1155415-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_695 ID=mRNA_695|Name=jgi.p|Trimin1|157098|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=999bp|location=Sequence derived from alignment at Contig_2:1154417..1155415- (Tribonema minus UTEX_B_3156 )
ATGATAGACGACCAAGGATCACTCACTGTTGTATGGAACGTGGAGTGTGA TCCTGAAATATTTCATTTTCTGGTGTCACTCGGTGAAGATGAGGACGGTA AGCAGGATGTCATAAGGTCGATCGCCGACTGCGATGGCGAGAGTACGTGG ATTGTGTCTCTGAAGGCGGACGCGCGAGACGAGTACGAGCCCCGCGACGT TCAACGGATTTTACATGAGCCAGACCAGGACATTGCGGCCCTGTCTTCCA TAGTCGAAAATGGTGATGTGTATCACCATGACGGCGCTGTTATACTTCCA AGTGGACGGAGACTGGATGATGGCTCGGTGATACGTGTCCTGTTTGCCTA CACTACGCCAACGAGAGACAGGTGGGGGCAATCTACGATACGGAGCATGA TTGTAGGTGCTCTCGCGAGTGCAAACCAGGCGCTTTCAAACAGTGGTGTC GGTTTCAAGATTGCTGCTGCGCGGATCATGCATGTGAACTGGAACTATGA CAATGAAGGGCATGTCGCTGCGCTAAACGCCCTCAGCCAGGGCGAAATGC CAGGCATTGCAGCTGCTCGCAAATTGTATAAGGCCGACTTGGTGCAGGTT GTAATTGATAATGCGCAGTACTGTGGATTTGGCAGTCTCATGCAGTCCCC ATCGTCTTCCTTCAGGGAGTACGCTTACTCAGTAGTGTACGGTGGTTGCT TTGCGCAGTTTTCACACATTCACGAGATTGGCCACAACATGGGTGCTAGA CACGATGTTGGGAACACCGACGCATCAGCTACTTGGCCTTATGCCATGGG CTACCGCTACTGCAGTGGAGAAGTCGATCCGCCGTACTTTCGCTCTGTCA TGTCTTACTCTTGTACCGGCGCAATGCGCGTACCTTACTTCTCTTCGCCG ACCGTGTACTATCAAGGTAGGCAGACAGGCATGCAAGGTGCAGACAATGC GAGGGTTCTGCGTGAGACAAAGTATATCGTAGCCAATTTCTACAATTGA
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Coding sequence (CDS) from alignment at Contig_2:1154417..1155415-

>mRNA_695 ID=mRNA_695|Name=jgi.p|Trimin1|157098|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=999bp|location=Sequence derived from alignment at Contig_2:1154417..1155415- (Tribonema minus UTEX_B_3156 )
ATGATAGACGACCAAGGATCACTCACTGTTGTATGGAACGTGGAGTGTGA
TCCTGAAATATTTCATTTTCTGGTGTCACTCGGTGAAGATGAGGACGGTA
AGCAGGATGTCATAAGGTCGATCGCCGACTGCGATGGCGAGAGTACGTGG
ATTGTGTCTCTGAAGGCGGACGCGCGAGACGAGTACGAGCCCCGCGACGT
TCAACGGATTTTACATGAGCCAGACCAGGACATTGCGGCCCTGTCTTCCA
TAGTCGAAAATGGTGATGTGTATCACCATGACGGCGCTGTTATACTTCCA
AGTGGACGGAGACTGGATGATGGCTCGGTGATACGTGTCCTGTTTGCCTA
CACTACGCCAACGAGAGACAGGTGGGGGCAATCTACGATACGGAGCATGA
TTGTAGGTGCTCTCGCGAGTGCAAACCAGGCGCTTTCAAACAGTGGTGTC
GGTTTCAAGATTGCTGCTGCGCGGATCATGCATGTGAACTGGAACTATGA
CAATGAAGGGCATGTCGCTGCGCTAAACGCCCTCAGCCAGGGCGAAATGC
CAGGCATTGCAGCTGCTCGCAAATTGTATAAGGCCGACTTGGTGCAGGTT
GTAATTGATAATGCGCAGTACTGTGGATTTGGCAGTCTCATGCAGTCCCC
ATCGTCTTCCTTCAGGGAGTACGCTTACTCAGTAGTGTACGGTGGTTGCT
TTGCGCAGTTTTCACACATTCACGAGATTGGCCACAACATGGGTGCTAGA
CACGATGTTGGGAACACCGACGCATCAGCTACTTGGCCTTATGCCATGGG
CTACCGCTACTGCAGTGGAGAAGTCGATCCGCCGTACTTTCGCTCTGTCA
TGTCTTACTCTTGTACCGGCGCAATGCGCGTACCTTACTTCTCTTCGCCG
ACCGTGTACTATCAAGGTAGGCAGACAGGCATGCAAGGTGCAGACAATGC
GAGGGTTCTGCGTGAGACAAAGTATATCGTAGCCAATTTCTACAATTGA
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