mRNA_692 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|156956
Unique NamemRNA_692
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: A0A835Z619_9STRA (Putative chaperone protein dnaJ n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z619_9STRA)

HSP 1 Score: 739 bits (1909), Expect = 9.030e-270
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 1
Query:    1 MRLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQPIEASARSVKMAPASVEEHAASCAQS 1101
            MRLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQPIEASARSVKMAPASVEEHAASCAQS
Sbjct:    1 MRLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQPIEASARSVKMAPASVEEHAASCAQS 367          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: A0A836CPW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW3_9STRA)

HSP 1 Score: 305 bits (780), Expect = 8.470e-98
Identity = 160/363 (44.08%), Postives = 221/363 (60.88%), Query Frame = 1
Query:    7 LYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG------------------QFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVL--NVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPH--KDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQ 1023
            LYAVLGV   ADA +IKKAYRKLAL+ HPDKNG P+KFK V  AY +L DPE+R  YDRFG+ESL + F  QPP     P DIF  FFG                     G  +T DI+HPLRV+L+D+YRG+ F+MC++R++ C  C G+G   G    C  C G G+ H MR + PG+MQRMQSMCP CKG GV       C +C G + + DKQ V+V++ PGT D H+F+F+ +ADE P KATG+V+FV+QT +H  + R   +L++ K L++ +SL GF F+  H++G  + + ++   +T+    KV++ AG+P     +    G + + F V +P  L   ++  L   LPP P Q
Sbjct:    4 LYAVLGVVKGADAASIKKAYRKLALLHHPDKNGCPDKFKGVAHAYGILSDPERREMYDRFGEESLNSNFNPQPP-----PADIFQQFFGGGFSAANMNGFPSFFTPGAASGATTTSDIIHPLRVTLDDIYRGKTFRMCVNRSIVCRSCDGTGAPAGHSRKCVGCAGVGMQHSMRPIAPGLMQRMQSMCPVCKGRGVCVDGDKTCDQCAGARVITDKQTVDVHMPPGTADQHRFVFRNLADECPGKATGNVIFVVQTKEHAVYKRHSQNLIMRKSLTVTESLCGFEFAIPHINGAVVWVRSAPRQVTKPNTIKVVRDAGLPPCPAAQDDSMGHMIITFTVAFPDELDNTEE--LLKWLPPRPSQ 359          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: A0A835ZF72_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF72_9STRA)

HSP 1 Score: 303 bits (775), Expect = 1.250e-96
Identity = 163/341 (47.80%), Postives = 222/341 (65.10%), Query Frame = 1
Query:   10 YAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTP----DIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG-VLNV-NKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILP 1008
            Y VLGV  DAD +TIKKAYRKLAL  HPDK GDP+KFKE++ AY+VL D +KR  YD++G    K G  ++    H  P DIF+ FFG  G  QS P    ++VHPLRVSLEDLY G+  ++ I+RN  C  C G G K G   PCG CNG GV    R +GPG++Q+MQ+ C  C G G V+N  ++C  C+GKK V +++ +EV+V PG ++G K  F   ADE P    G VVFVIQ+  H+ F RKGADL++EKKLSL +SL GF F  +H+DG ++ L ++   +T+H+  +VI   GMPH   P ++G L+V+F V +P++L +   + +  +LP
Sbjct:   35 YKVLGVPKDADDNTIKKAYRKLALKNHPDKGGDPDKFKEISMAYDVLSDAQKRKMYDQYG----KDGVNEEGGPGH-TPDDIFSMFFGGGGRRQSGPRRGENLVHPLRVSLEDLYNGKTCRLAINRNRLCSACAGRGGKEGAERPCGACNGHGVQIQYRQIGPGMVQKMQATCSDCSGEGKVINPRDRCRECQGKKVVKERKVLEVHVTPGMKNGEKITFHEEADETPGMLPGDVVFVIQSKPHDTFQRKGADLIMEKKLSLAESLCGFDFVVQHMDGRALRLRSAPGKVTKHEHLQVIPHEGMPHAGNPYVKGRLFVLFKVVFPETLDQLAVSAIASVLP 370          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: A0A836CFV4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV4_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.560e-96
Identity = 161/362 (44.48%), Postives = 219/362 (60.50%), Query Frame = 1
Query:    7 LYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG----------------QFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVL--NVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSS--ITRHKEAKVIKGAGMPH----KDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPL 1020
            LY +LGV  DA+   IKKAYRKLAL  HPDK+G PEKFK ++ AYEVL DPEKR  YD+FG++S K  F   PP      PD+F  FFG                  GG  +TPDI HPLRV+L+D++RG+ F+MC++RN+ C  C G+G   GQ   C  C G GV H MRA+ PG+MQRMQSMCP C G GV            G + V DKQ ++V++ PGT D H+F+F+ +ADE P K+ G+VVFV+QT +H  + R G +L++ K LS+ +SL GF FS  H++G ++ + ++   +T+    KV+K AG+P     +DK    G + + F V +P  L    +  L   LPP P+
Sbjct:    4 LYTILGVEKDAEIIVIKKAYRKLALQHHPDKSGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPP------PDVFQQFFGGGFSNSSNGFPGFFATATGGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGIGVQHSMRAIAPGLMQRMQSMCPMCGGKGVCVDGDKXXXXXXGARVVADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAEGEVTKPNTIKVLKDAGLPACPTGQDKE--MGHMIITFAVAFPDRLDNADE--LLRYLPPRPV 355          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: UPI001CB9C02D (dnaJ protein homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9C02D)

HSP 1 Score: 294 bits (753), Expect = 2.260e-93
Identity = 160/354 (45.20%), Postives = 213/354 (60.17%), Query Frame = 1
Query:    4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFG-GPQSTP----------DIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPL 1020
            R Y +LGV   A  D +KKAYRK A+  HPDK GDPEKFKEV +AYEVL DPEKR  YD+ G+++LK G    P     F  DIF  FFG    GP +T           D+VHPL+VSLEDLY G   K+ +SRN  C  CKG G K G    CG C G G+   +R +GP ++Q+MQ  C  CKG G  + + ++C  C+G+K   +K+ +EV+V  G ++G K  F G ADE P   TG +VFV+Q  +H +F RKG DL  E  LSL ++L GF+F   H+D   +++++    + +    K I   GMP   +P M+G LY+ F VE+P+SLS EQ   LE +LPP+PL
Sbjct:   14 RYYEILGVPKTASQDDLKKAYRKAAIKNHPDKGGDPEKFKEVAQAYEVLSDPEKREIYDQHGEDALKEGMGSGPGGHDPF--DIFQSFFGNSPFGPSNTSSRGRRQRKGEDVVHPLKVSLEDLYNGTSKKLSLSRNKLCIKCKGKGSKSGASMTCGSCQGSGMKVSIRHLGPSMIQQMQHPCNDCKGTGEAISDKDRCPTCKGEKVTPEKKLIEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFFEHTLSLTEALCGFQFILTHLDNRQLLIKSQPGEVVKADSFKAINDEGMPMYQRPFMKGKLYIHFTVEFPESLSPEQCKMLETVLPPKPL 365          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: A0A7N0RDN5_KALFE (Uncharacterized protein n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A7N0RDN5_KALFE)

HSP 1 Score: 293 bits (751), Expect = 4.120e-93
Identity = 157/350 (44.86%), Postives = 217/350 (62.00%), Query Frame = 1
Query:    4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG--QFGGPQST--------PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVL--ENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPP 1011
            + Y +LGV+  A  D +KKAYRK A+  HPDK GDPEKFKE+ +AYEVL DPEKR  YD++G+++LK G        H  P DIF  FFG   FGG  S+         D+VHPL+VSLEDLY G   K+ +SRN+ C  CKG G K G    CG C G G+   +R +GP ++Q+MQ  C  CKG G  + + ++C +C+G+K V +K+ +EV+V  G ++G K  F G ADE P   TG +VFV+Q  +H +F RKG DL +E  LSL ++L GF+F   H+DG  +++  E   + +  + K I   GMP   +P M+G LY+ F V++P S++ +Q   LE ILPP
Sbjct:   13 KYYEILGVSKSAAQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGAGGHD-PFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLSRNILCSKCKGKGSKSGASMTCGGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHSLSLTEALCGFQFILTHLDGRQLLIKSEPGELVKPDQFKAINNEGMPLYQRPFMKGKLYIHFSVDFPDSVTHDQAKALEAILPP 361          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: UPI00053C6EBE (dnaJ protein homolog n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C6EBE)

HSP 1 Score: 293 bits (749), Expect = 8.490e-93
Identity = 157/345 (45.51%), Postives = 213/345 (61.74%), Query Frame = 1
Query:    4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQST-----PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPP 1011
            R Y +LGV  DA  + +KKAY+K A+  HPDK GDPEKFKE+ +AYEVL DPEKR  YD++G+E+LK G     P    F  DIF+ FFG  G  +        D+VHPL+VSLEDLY G   K+ +SRNV C  C G G K G    C  C G G+   +R +GP ++Q+MQ +C  CKG G  +   ++C +C+G+K V +K+ +EV V  G ++G K  F G ADE P   TG VVFVIQ  +H +F RKG +L  E  LSL ++L GF+F   H+DG  ++++++   + +    K I   GMP   +P M+G LY+ F+VE+P SLS +Q   LE ILPP
Sbjct:   15 RFYEILGVTKDATQEDLKKAYKKAAIKNHPDKGGDPEKFKEIAQAYEVLSDPEKREIYDQYGEEALKEGMGGSGPTIDPF--DIFSSFFGGGGSSRGRRERRGEDVVHPLKVSLEDLYLGTTKKLSLSRNVICSKCNGKGSKSGASMKCSGCQGIGMKVTVRHLGPSMIQQMQHVCNECKGTGETIDEKDRCLQCKGEKVVPEKKVLEVFVEKGMQNGQKITFPGAADEAPDTVTGDVVFVIQQKEHPKFKRKGENLFYEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAIDDEGMPVHQRPFMKGKLYIHFMVEFPDSLSSDQVKALEAILPP 357          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: A0A5B7BF30_DAVIN (Putative DNAJ n=3 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BF30_DAVIN)

HSP 1 Score: 291 bits (746), Expect = 2.330e-92
Identity = 160/352 (45.45%), Postives = 216/352 (61.36%), Query Frame = 1
Query:    4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG--QFGGPQST--------PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEP 1017
            + Y +LGV+ +A  + +KKAYRK A+  HPDK GDPEKFKE+ +AYEVL DPEKR  YD++G+++LK G      M   F  DIF  FFG   FGG  S+         D+VHPL+VSLEDLY G   K+ +SRNV C  C G G K G    C  C G G+   +R +GP ++Q+MQ  C  CKG G  +   ++C +C+G+K V +K+  EV V  G + G K  F G ADE P   TG +VFV+Q  +H +F RKG DL +E  LSL +SL GF+F   H+DG  ++++++   + +  + K I   GMP   +P MRG LY+ F VE+P+SLS EQ   LE +LPP P
Sbjct:   13 KYYEILGVSKNATQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGSGGMHDPF--DIFQSFFGGSPFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYSGISKKISLSRNVLCSKCNGKGSKSGASMKCSGCQGSGMKVSIRQLGPSMIQQMQHACNECKGTGETINERDRCPQCKGEKVVQEKKVREVIVEKGMQIGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTESLCGFQFILTHLDGRQLLIKSNPGEVVKPDQYKAINEEGMPIYQRPFMRGKLYIHFTVEFPESLSPEQVKALEAVLPPRP 362          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: UPI000901935C (dnaJ protein homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000901935C)

HSP 1 Score: 290 bits (742), Expect = 9.580e-92
Identity = 154/351 (43.87%), Postives = 217/351 (61.82%), Query Frame = 1
Query:    4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG---QFGGP--------QSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPP 1011
            + Y +LGV+ +A  D IKKAYRK A+  HPDK GDPEKFKE+ +AYEVL DPEKR  YD +G+++LK G      M   F  DIF  FFG    FGG         +   D++HPL+VSLE++Y G   K+ +SRNV C  C G G K G    CG C G G+   +R +GP ++Q+MQ  C  CKG G  + + ++C +C+G K V +K+ +EV+V  G ++G K  F G ADE P   TG +VFV+Q  +H +F RKG DL ++  L+L ++L GF+F   H+DG  ++++++   + +  + K I   GMP   +P M+G LY+ F+V++P SLS EQ   LE ILPP
Sbjct:   13 KYYDILGVSKNAGVDEIKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDEYGEDALKEGMGGGAGMHDPF--DIFQSFFGGGNPFGGXXXXXXXRQRRGEDVIHPLKVSLEEMYSGTTKKLSLSRNVICSKCNGKGSKSGSSMKCGGCEGSGMKVTIRQLGPSMIQQMQQPCNECKGTGETINDKDRCPQCKGDKVVPEKKVLEVHVEKGMQNGQKITFPGEADEAPDMITGDIVFVLQQKEHPKFKRKGDDLFVDHTLTLTEALCGFQFILTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPTYQRPFMKGKLYIHFMVDFPDSLSPEQVKALEAILPP 361          
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 n=7 Tax=Caryophyllales TaxID=3524 RepID=DNJH_ATRNU)

HSP 1 Score: 290 bits (741), Expect = 1.280e-91
Identity = 157/352 (44.60%), Postives = 216/352 (61.36%), Query Frame = 1
Query:    4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG--QFGGPQST--------PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEP 1017
            R Y +LGV  DA  + +KKAY+K A+  HPDK GDPEKFKE+  AYEVL DPEKR  YD++G+++LK G      M   F  DIF  FFG   FGG  S+         D+VHPL+VSLEDL+ G   K+ +SRNV C  C G G K G    C  C G G+   +R +GP ++Q+MQ  C  CKG G  + + ++C +C+G+K V +K+ +EV V  G + G K  F G ADE P   TG +VFV+Q  +H +F RKG DL  E  LSL ++L GFRF   H+DG  ++++++   + +  + K I+  GMP   +P M+G +Y+ F VE+P SL+ +Q   LE ILPP+P
Sbjct:   13 RYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPF--DIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKP 362          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156956 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z619_9STRA9.030e-270100.00Putative chaperone protein dnaJ n=1 Tax=Tribonema ... [more]
A0A836CPW3_9STRA8.470e-9844.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZF72_9STRA1.250e-9647.80Heat shock protein 40 n=1 Tax=Tribonema minus TaxI... [more]
A0A836CFV4_9STRA2.560e-9644.48Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
UPI001CB9C02D2.260e-9345.20dnaJ protein homolog n=1 Tax=Erigeron canadensis T... [more]
A0A7N0RDN5_KALFE4.120e-9344.86Uncharacterized protein n=3 Tax=Pentapetalae TaxID... [more]
UPI00053C6EBE8.490e-9345.51dnaJ protein homolog n=1 Tax=Tarenaya hassleriana ... [more]
A0A5B7BF30_DAVIN2.330e-9245.45Putative DNAJ n=3 Tax=Davidia involucrata TaxID=16... [more]
UPI000901935C9.580e-9243.87dnaJ protein homolog n=2 Tax=Ipomoea TaxID=4119 Re... [more]
DNJH_ATRNU1.280e-9144.60DnaJ protein homolog ANJ1 n=7 Tax=Caryophyllales T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1148722..1149825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|156956|e_gw1.2.280.1
BRITEko00000,ko00001,ko03029,ko03110
KEGG Pathwayko04141,map04141
KEGG koko:K09503
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0005911,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0009314,GO:0009416,GO:0009506,GO:0009628,GO:0009648,GO:0009651,GO:0009791,GO:0009909,GO:0009911,GO:0010228,GO:0016020,GO:0022414,GO:0030054,GO:0030312,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043462,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048518,GO:0048573,GO:0048580,GO:0048582,GO:0048608,GO:0048731,GO:0048831,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050896,GO:0051094,GO:0051239,GO:0051240,GO:0051336,GO:0055044,GO:0061458,GO:0065007,GO:0065009,GO:0070013,GO:0071944,GO:2000026,GO:2000241,GO:2000243
DescriptionChaperone protein dnaJ
COG categoryO
Max annot lvl35493|Streptophyta
EggNOG OGsCOG0484@1|root,KOG0712@2759|Eukaryota,37MSG@33090|Viridiplantae,3GATR@35493|Streptophyta,3HWBY@3699|Brassicales
Evalue1.39e-93
Seed ortholog28532.XP_010544327.1
Hectar predicted targeting categoryother localisation
TranscriptId157278
TrackFilteredModels1
ProteinId156956
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156956gene_692Tribonema minus UTEX_B_3156 geneContig_2 1148722..1149825 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_692_1exon_692_1Tribonema minus UTEX_B_3156 exonContig_2 1148722..1149825 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_692CDS_692Tribonema minus UTEX_B_3156 CDSContig_2 1148722..1149825 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156956Trimin1|156956|e_gw1.2.280.1Tribonema minus UTEX_B_3156 polypeptideContig_2 1148722..1149825 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_692 ID=mRNA_692|Name=jgi.p|Trimin1|156956|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1104bp|location=Sequence derived from alignment at Contig_2:1148722..1149825- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCTTGTACGCAGTGCTCGGTGTAGCTACCGACGCTGACGCTGACAC
GATCAAAAAGGCGTACCGCAAGCTGGCACTGGTGCTGCATCCCGATAAAA
ACGGTGATCCGGAGAAATTCAAGGAAGTGAACGAGGCATATGAGGTTCTC
CGCGATCCAGAGAAGCGGTCATCGTACGACAGATTTGGCGATGAGTCGCT
CAAGGCAGGATTTCAGCAACAGCCTCCCATGCCGCATGGCTTTCCTCCAG
ATATATTTGCTCATTTCTTCGGGCAGTTCGGAGGGCCGCAGAGCACGCCA
GATATCGTACACCCGTTGCGCGTGTCCCTTGAAGACCTCTACAGGGGGCG
TCAGTTCAAGATGTGCATATCTAGGAACGTCACGTGCGGTGACTGCAAAG
GCTCTGGATGCAAAGGCGGACAAGGACATCCGTGCGGCATCTGCAACGGC
CAAGGGGTGCATCACCACATGCGGGCGGTTGGCCCTGGCATCATGCAGCG
CATGCAGTCCATGTGCCCCGCATGCAAAGGAGCCGGTGTGCTCAACGTCA
ACAAGTGTGGCAGGTGTGAGGGTAAGAAGACAGTAGGAGACAAGCAAAAT
GTCGAAGTGAACGTCGTGCCTGGCACCGAAGACGGACACAAGTTCATCTT
TCAAGGCATGGCGGATGAACAGCCGAGCAAGGCCACCGGCAGCGTCGTCT
TCGTGATTCAAACTACTCAGCACGAACGCTTCACCCGCAAAGGAGCAGAT
CTGGTGCTGGAGAAGAAATTGTCCCTGAGACAGAGCCTGTCTGGATTCAG
ATTCTCACAGAAGCATGTGGATGGTACTAGCATAGTACTGGAGAACAGCA
GCATAACAAGGCACAAAGAGGCAAAGGTAATCAAAGGGGCAGGCATGCCA
CACAAAGACAAGCCGGGAATGAGGGGTGATCTGTATGTTATATTTTTGGT
CGAGTATCCCAAGTCCTTGTCAAAGGAACAGCAAGCACAGCTTGAGATCA
TCCTACCACCTGAGCCTCTTCAGCCCATAGAGGCAAGCGCGCGATCTGTG
AAAATGGCGCCTGCTAGTGTTGAGGAGCATGCTGCGTCGTGCGCGCAGTC
CTAG
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protein sequence of jgi.p|Trimin1|156956

>Trimin1|156956|e_gw1.2.280.1 ID=Trimin1|156956|e_gw1.2.280.1|Name=jgi.p|Trimin1|156956|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=368bp
MRLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVL
RDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTP
DIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNG
QGVHHHMRAVGPGIMQRMQSMCPACKGAGVLNVNKCGRCEGKKTVGDKQN
VEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGAD
LVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSSITRHKEAKVIKGAGMP
HKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQPIEASARSV
KMAPASVEEHAASCAQS*
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mRNA from alignment at Contig_2:1148722..1149825-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_692 ID=mRNA_692|Name=jgi.p|Trimin1|156956|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1104bp|location=Sequence derived from alignment at Contig_2:1148722..1149825- (Tribonema minus UTEX_B_3156 )
ATGCGCTTGTACGCAGTGCTCGGTGTAGCTACCGACGCTGACGCTGACAC GATCAAAAAGGCGTACCGCAAGCTGGCACTGGTGCTGCATCCCGATAAAA ACGGTGATCCGGAGAAATTCAAGGAAGTGAACGAGGCATATGAGGTTCTC CGCGATCCAGAGAAGCGGTCATCGTACGACAGATTTGGCGATGAGTCGCT CAAGGCAGGATTTCAGCAACAGCCTCCCATGCCGCATGGCTTTCCTCCAG ATATATTTGCTCATTTCTTCGGGCAGTTCGGAGGGCCGCAGAGCACGCCA GATATCGTACACCCGTTGCGCGTGTCCCTTGAAGACCTCTACAGGGGGCG TCAGTTCAAGATGTGCATATCTAGGAACGTCACGTGCGGTGACTGCAAAG GCTCTGGATGCAAAGGCGGACAAGGACATCCGTGCGGCATCTGCAACGGC CAAGGGGTGCATCACCACATGCGGGCGGTTGGCCCTGGCATCATGCAGCG CATGCAGTCCATGTGCCCCGCATGCAAAGGAGCCGGTGTGCTCAACGTCA ACAAGTGTGGCAGGTGTGAGGGTAAGAAGACAGTAGGAGACAAGCAAAAT GTCGAAGTGAACGTCGTGCCTGGCACCGAAGACGGACACAAGTTCATCTT TCAAGGCATGGCGGATGAACAGCCGAGCAAGGCCACCGGCAGCGTCGTCT TCGTGATTCAAACTACTCAGCACGAACGCTTCACCCGCAAAGGAGCAGAT CTGGTGCTGGAGAAGAAATTGTCCCTGAGACAGAGCCTGTCTGGATTCAG ATTCTCACAGAAGCATGTGGATGGTACTAGCATAGTACTGGAGAACAGCA GCATAACAAGGCACAAAGAGGCAAAGGTAATCAAAGGGGCAGGCATGCCA CACAAAGACAAGCCGGGAATGAGGGGTGATCTGTATGTTATATTTTTGGT CGAGTATCCCAAGTCCTTGTCAAAGGAACAGCAAGCACAGCTTGAGATCA TCCTACCACCTGAGCCTCTTCAGCCCATAGAGGCAAGCGCGCGATCTGTG AAAATGGCGCCTGCTAGTGTTGAGGAGCATGCTGCGTCGTGCGCGCAGTC CTAG
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Coding sequence (CDS) from alignment at Contig_2:1148722..1149825-

>mRNA_692 ID=mRNA_692|Name=jgi.p|Trimin1|156956|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1104bp|location=Sequence derived from alignment at Contig_2:1148722..1149825- (Tribonema minus UTEX_B_3156 )
ATGCGCTTGTACGCAGTGCTCGGTGTAGCTACCGACGCTGACGCTGACAC
GATCAAAAAGGCGTACCGCAAGCTGGCACTGGTGCTGCATCCCGATAAAA
ACGGTGATCCGGAGAAATTCAAGGAAGTGAACGAGGCATATGAGGTTCTC
CGCGATCCAGAGAAGCGGTCATCGTACGACAGATTTGGCGATGAGTCGCT
CAAGGCAGGATTTCAGCAACAGCCTCCCATGCCGCATGGCTTTCCTCCAG
ATATATTTGCTCATTTCTTCGGGCAGTTCGGAGGGCCGCAGAGCACGCCA
GATATCGTACACCCGTTGCGCGTGTCCCTTGAAGACCTCTACAGGGGGCG
TCAGTTCAAGATGTGCATATCTAGGAACGTCACGTGCGGTGACTGCAAAG
GCTCTGGATGCAAAGGCGGACAAGGACATCCGTGCGGCATCTGCAACGGC
CAAGGGGTGCATCACCACATGCGGGCGGTTGGCCCTGGCATCATGCAGCG
CATGCAGTCCATGTGCCCCGCATGCAAAGGAGCCGGTGTGCTCAACGTCA
ACAAGTGTGGCAGGTGTGAGGGTAAGAAGACAGTAGGAGACAAGCAAAAT
GTCGAAGTGAACGTCGTGCCTGGCACCGAAGACGGACACAAGTTCATCTT
TCAAGGCATGGCGGATGAACAGCCGAGCAAGGCCACCGGCAGCGTCGTCT
TCGTGATTCAAACTACTCAGCACGAACGCTTCACCCGCAAAGGAGCAGAT
CTGGTGCTGGAGAAGAAATTGTCCCTGAGACAGAGCCTGTCTGGATTCAG
ATTCTCACAGAAGCATGTGGATGGTACTAGCATAGTACTGGAGAACAGCA
GCATAACAAGGCACAAAGAGGCAAAGGTAATCAAAGGGGCAGGCATGCCA
CACAAAGACAAGCCGGGAATGAGGGGTGATCTGTATGTTATATTTTTGGT
CGAGTATCCCAAGTCCTTGTCAAAGGAACAGCAAGCACAGCTTGAGATCA
TCCTACCACCTGAGCCTCTTCAGCCCATAGAGGCAAGCGCGCGATCTGTG
AAAATGGCGCCTGCTAGTGTTGAGGAGCATGCTGCGTCGTGCGCGCAGTC
CTAG
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