mRNA_6873 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A836CEN5_9STRA (Kinetochore protein NDC80 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN5_9STRA) HSP 1 Score: 1079 bits (2790), Expect = 0.000e+0 Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 1
Query: 1 MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALAELRAQGEGALSAVAGCGAVERLWELSAERAEE 1869
MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALAELRAQGEGALSAVAGCGAVERLWELSAERAEE
Sbjct: 1 MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALAELRAQGEGALSAVAGCGAVERLWELSAERAEE 623
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: D8LLF2_ECTSI (Kinetochore protein NDC80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLF2_ECTSI) HSP 1 Score: 310 bits (794), Expect = 3.800e-91 Identity = 209/516 (40.50%), Postives = 290/516 (56.20%), Query Frame = 1
Query: 94 RHSLAAPGGRKSSVGMKRSSNFGTAA-IKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG---------EVDIADHA-----FFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTR--QARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAA---AKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRL 1581
R S++ G RKS VG++R+++FGT ++D RP+ DK N S+ L YL D+GYDQPI++K LTRPSGRDFNNI GFLFRQ DP ++PS RFED+V+PFLK + YPFT+SKS L AVGAPQ+WPK + AISWIV+ L+YD+ +A E EQ+ R E + D F YL +AY CFL GD+ + A+ + T + GAE R + N AL + + +L + +LP L + + SD EK L+ +++ HR L EKV+KR EE R K L + E A+LRE++A QE SA D++ ER RLRD + A E K A+K GW A++++S EAL+ +H +A+AL LVP A+NA +Y + I+ L+ E+ VL+NDVRG IRPAL ++ A+VRR R+ L LL ++ +E Y + K ALD +A ++ ERRL
Sbjct: 97 RPSMSTAGDRKS-VGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPS--GRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEY--TEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSAS-----------DMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQVKRKEEAYNKSKYALDKQVAGGKSETEHEERRL 596
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: W7TL40_9STRA (Kinetochore protein NDC80 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL40_9STRA) HSP 1 Score: 298 bits (762), Expect = 9.230e-87 Identity = 195/495 (39.39%), Postives = 284/495 (57.37%), Query Frame = 1
Query: 121 RKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG-------EVDIADH-AFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLE---DEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALE 1572
RKSS G+++S+ +G+ ++ DPRP TDK + SIR L+NYL D+ YDQP SAKIL RP+ +DF I+ FLFRQ D ++ + + EDEV+ F K++ YPF +SK+ +QAVG +WP LA+I+W+VELL YD+EV + Q +G + + AD A FEYLG+AY FL+GD+ LE LVG+F + + A+ Q + + +R +R ALP L+QR D SDL KFR LI QL HR+ L KVEKR E L VR Q+ L+ VA QELS E DV RM ER RL + + A EHK+ K WEAE+++SR + LE A T N+KA AL L+P A+N+NG YE+ +++ ++ + E ++ D++G IRP+LA +++ ++ ++ EAR +L++LD + +E Y+ EK ++A MA K++ A+E
Sbjct: 102 RKSSTGLRKSTAYGSH-VRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRIT--GKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPE-----------DVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVE 582
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: K3WJZ8_GLOUD (Kinetochore protein NDC80 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJZ8_GLOUD) HSP 1 Score: 252 bits (644), Expect = 1.100e-70 Identity = 179/537 (33.33%), Postives = 281/537 (52.33%), Query Frame = 1
Query: 175 KTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG-EVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHS---LEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALA 1773
+ DPRP+TDK + N I AL+ +L+D YD +S KIL PS +DF NI+ FLFRQ DP ++ G +FE++V LK++ YPF +SK+ L AVG+P +WP L +I+W++ELL YD+ V Q+D + + + D AFFEYLG AY FL GD+ LEQ QNQ+I E + N L+ E+ S +LP L ++ DC SDLEKF+ L+AQL+ H+ +L++K+++R E + + +L + +I L R+ +QELSAE DV++M+ ER RL + AA+ + Q W E ++ +++A+EN V + A ++L+P AKN G DYE+ I+ H+ + ++ LS ++ HIRPAL + R A +++L+L E S RRE++A +A + K +E ++ S + + A + T +R L+ + + E+ ALV C D ++ + A+A
Sbjct: 101 RADPRPLTDKTYMNGCIHALIEFLSDRQYDHVLSPKILKGPSKKDFYNIILFLFRQVDPTFEF--GVKFEEDVATQLKTLRYPFAISKTALVAVGSPHTWPALLGSIAWVIELLSYDEIV------QRDTNVEEFDGENGDKAFFEYLGTAYRVFLAGDDDQYNELEQREATKIDSQNQVIRDECSELERANEELKRRIEQAKSAKSSLPALNSKKADCLSDLEKFKKLVAQLEAHQASLIQKIQERDQERLKKEHELQARQREIQNLTIRIESQELSAE-----------DVEQMSKERARLNEQCHLAAQRQKEIQSNIWRQETTIAEQMDAIENLVKQYSITATNMKLLPVMAKNTFGVDYEIEIDAHTGGVVAAQQ--LSQHLKQHIRPALLNFKKNRSDRRSVALDEVLQLQGDVEHSRAVFNVEYQKEQTLESKAKKMEDTVRREREAREATINQKLAITEDVELQIESILNEKDIATQETQSRQQFEALKKSYVSMTEKYSSLIEKNRHEVANALVSCTDHKETIEQAIA 616
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A1Y1ILS8_KLENI (Kinetochore protein NDC80 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILS8_KLENI) HSP 1 Score: 238 bits (606), Expect = 2.130e-65 Identity = 182/481 (37.84%), Postives = 284/481 (59.04%), Query Frame = 1
Query: 142 KRSSNFGTAA-IKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKE-VAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGD--ETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALE 1572
+RSS FG+ K DPRP+ DK F+ IR+L+ YL ++GY+ IS K+L+ P+ ++F +I+ FLF + D + P + EDEV K + YPF +SKS LQAVG+P +WP LAA++W+V+LL Y++ +AA E + D + F EY+ Q+Y FL G+ + + L++ L F ++ G + + +A N ALR + ++ L EL +++ + SD+ KFR LI L H D L +KV+++ A DL R ++AA+ NQ+L+A A S ++AEDV RM+ E+ ++ + + K +K W+AE+QLSR LE LE AV + ++ L+++P+ AK A G +EL ++ + E+ +LS D++G I+PALAA++DA + + A+ ++L L +AQ+ SE XXXXXXXXXXXXXXXXXX R EK+ + + A + +A E
Sbjct: 73 RRSSIFGSRPQAKNDPRPLADKGFQKACIRSLITYLTNHGYNHAISEKLLSTPTSKEFLHIVQFLFHKVDTNIKFGP--KIEDEVPLVFKRLRYPFQISKSALQAVGSPHTWPALLAALAWLVDLLNYEERAIAAKERDAFD-------ESGQRLFLEYVEQSYRLFLEGEARDADASLLDEQLAQQFEVRDAETGVDIERLEAANTALRAELDAARTQPAPLEELERKRENLISDVGKFRKLIENLQAHGDMLRKKVDEKTA-------DLAAKRTELAAVA--AENQDLTARVAAQS--INAEDVARMSKEKLKVEEVLRTVTAQKDRLEKDVWQAEVQLSRHLEELEGAVRSYHAAGDRLKVLPSDAKRAGGLQFELTLHARAARPED-MLSGDLKGVIKPALAAIKDAYTSKTRAAQAEVLGLAEAQDGSEEAVSEXXXXXXXXXXXXXXXXXXXRAEKERGEGEVRGMAAEVAATE 532
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A7S4K7P6_9STRA (Kinetochore protein NDC80 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K7P6_9STRA) HSP 1 Score: 237 bits (604), Expect = 4.820e-65 Identity = 165/503 (32.80%), Postives = 257/503 (51.09%), Query Frame = 1
Query: 106 AAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELL----MYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSN-DVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDP 1599
A P RKS+ G R S AA+K DPRPI +K++ I +L+ YL GY+ P+S K L+RPSGRDFN I+ F+ R DP++ +FEDEV KS+ YP+ +SK+ L A G+P +WP LAA+ W++ELL ++++ E + L ++ AFF YL +AY FL+ D+ ALE+ LV F N I E Q N ++E +++L LPEL+QR+ D A+DLEKF L+ +L+ H+ L +KVE+R AE + + L + QI AL+ +V +QE S E D++RM E+ R + + AA K+ K WE +LS+R++ L V N K L L N N + EL + + D + + D++G + P + +++ + A+ L+LLD +E +E +R+E + ++ + + A+E ++ S RDP
Sbjct: 63 ATPSRRKSNGGEWRQSLAPQAALKPDPRPIAEKSYMTSCINSLLQYLVSSGYEHPVSRKTLSRPSGRDFNQIVTFILRCIDPSFNDGT-QKFEDEVAMAFKSLGYPYPISKTALVAAGSPHTWPTLLAALMWLIELLGCEDSQEEDILRNEDDATMNSLEEIESRSEKAFFRYLNKAYVAFLSADDPQYEALEEALVEYFEKDNLKIEGEFQRVTETNMEIQEEIKQLLRNGEELPELKQRREDYATDLEKFYDLVKKLEEHKATLRKKVEERTAELVKREEGLQQITAQIDALKRQVQSQEFSVE-----------DIRRMQKEKVRQEESIARAAGAKNEQNKALWEVSTELSQRVDQLRETVEKYNWKVMELHLSAERDSNQNKYELELHTDLAQVGDPAKIFNGVDIKGSVLPMVFSLKCDFAEKCANAKRDTLKLLDQKEQTEKATAHATDCVKELDVKSKECEQLHRQESAENEMVLSNRLKEVDAIETKVFSLRDP 553
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A7R9TIA6_9VIRI (Kinetochore protein NDC80 n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TIA6_9VIRI) HSP 1 Score: 225 bits (574), Expect = 4.730e-61 Identity = 161/484 (33.26%), Postives = 248/484 (51.24%), Query Frame = 1
Query: 142 KRSSNFGTAAI-KTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDK---EVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRL 1581
+RSS + + + DPRP +DK + IR L+ YL+ +GYD PIS K+L P+ +DF +I+ FLFR+ DP + + EDEV K + YPF +SKS L AVG+P +WP LAA+ W+VELL+Y++ E A S +D G FFEY+ +AY FL GD+ + TALE++L TF ++ E + NAAL+ E + L ++++ + D+ KF+ LI+ L H+ L +K +R AE E +L + LR RVANQ +S + DV+RM +R R+ D + A A+++ ++ + E LE SK +ALQ++PA AK ANG D+ L +N + + V + D+ G +RPALA + + +R +E R +LL+L + Q + Y EK+ DA A + + A+++E L
Sbjct: 39 RRSSIYSRGPVARADPRPTSDKAYTQQGIRTLIAYLSSHGYDAPISPKLLAAPTSKDFMHIVSFLFRRLDPNIKFV--GKMEDEVPQVFKRLQYPFQISKSALYAVGSPHTWPGLLAALVWLVELLVYEERAEEARAAGSSGEDATAPGP-----RQFFEYVSKAYGAFLAGDDDTCTALEEELGETFRQRDAAAADEIARLEKANAALKAEIEAADTEPTPLARAQEKRANMEGDVAKFQKLISNLQTHKAQLAKKCGERMAEAEAKAAELKEALAVVDNLRARVANQAVSQD-----------DVKRMQRDRARINDELRGAVASHEDAERQADANAAAVAAKSEELEAIASEYTSKGEALQVLPAGAKRANGVDFTLVMNPNGAD----VCATDLEGSVRPALADVVEEYAQRTREDRRELLDLQEQQHKTTESLAEAREANAQARSELMALEERYTLEKERADADFAQQTSAAASVEEEL 500
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A7S3PLI3_9STRA (Kinetochore protein NDC80 (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLI3_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.430e-60 Identity = 151/449 (33.63%), Postives = 251/449 (55.90%), Query Frame = 1
Query: 121 RKSSVGM--------KRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDI--ADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELS-AERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASE 1434
RKSSVG ++SS + + +K DPRPI++K F + SIR L+ +L+++ YD PIS K+L+RP+G+DF N++ FLF D + G +F DEV P K + YPF +SK+ L AVG+ +WP LA++ W++ELL Y + +R E+D+ D FF YL QAY FL GD+ L+ +L+GTFG ++ I + + + L + ++I + +LP L +++D DL KF+ L+ +L H++ L K+ AE + +L A L++++ QELS A+ + +E A V++ + ++R +GM QK WE EM ++++LE LEN N A L+LVP +A+N+ G D+EL +N + E++L+ DV+ ++ +L +++D+ + + E + Q +E + E +E
Sbjct: 87 RKSSVGTNLSSHNSGRQSSVYSSTVLKNDPRPISNKGFMHASIRKLIQFLSEHNYDHPISPKVLSRPTGKDFQNVLQFLFLLVDRNLKF--GQKFTDEVPPIFKGLCYPFNISKTALSAVGSLHTWPPLLASLIWLMELLEYH---------EAERHRESEIDLENGDKVFFTYLRQAYQSFLCGDDDKSEELDNELLGTFGERDSAIQEQTSQLETQREDLLKDLDKIKNSKSSLPALTCQKKDYQEDLVKFQGLVKKLREHKENLEGKLRSSEAEFNARQQELNEALSVKAKLQKQLDEQELSPADAERIISEREAATVEQGQVNQKR--EGM----------QKSAWEIEMTIAKKLEQLENMTSKYNEVAARLKLVPKSAQNSQGVDFELKLNLAGFGNGEDLLNVDVKKVLKTSLFSLKDSAMTKTNEIKTQCMEFQEQVEKNE 512
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A5B8MIC0_9CHLO (Kinetochore protein NDC80 n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIC0_9CHLO) HSP 1 Score: 224 bits (571), Expect = 1.500e-60 Identity = 152/457 (33.26%), Postives = 252/457 (55.14%), Query Frame = 1
Query: 73 RASLAAVR-HSLAAPGGRKSSVGMKR-SSNFG-TAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASE 1434
RASLA V H+ GRK+ G +R SS FG + K DPRP+TDK + ND +RAL++YL +GYD P+S K LT P+ +DF I+ FLF++ D + + + E+EV K + YPF +S+S L AVG+P SWP LAA++W+VELL Y+++ A + D E D + FFE++G++Y FL+GD+ LE +L TF +++ I AE + + L+ + + ++ L L+Q++RD SD+ KF LI +L H++A+ +K R E V++Q ++ E DV RMA +R +L+D + + K + E E + +++E LE + A LQL+P+ AK+A G ++++ +N SL+D V + D++ ++PAL A+R++ ++ + E++ E+ + +++E
Sbjct: 40 RASLAGVPGHNGPKTPGRKTPGGTRRRSSIFGWSQQSKHDPRPLTDKQYLNDCVRALISYLTTHGYDNPVSPKTLTHPTCKDFVQIVTFLFKKVDASLKIV--GKMEEEVPQIFKKLKYPFPISRSALYAVGSPHSWPSLLAALTWLVELLNYEEKAAEVREKSVDNF---ECDTSSRDFFEFVGKSYKSFLSGDDGECFVLEDELRATFQEKDKEIIAEVERHEQEIEGLKGSIAGLTAKPTPLEALQQKRRDLDSDINKFESLITKLKEHKEAVEQKTRDRXXXXXXXXXXXXXXXXXXXXXXEVVSSQSINKE-----------DVHRMAQQRSKLQDILQSLTSQKDSLLDAALEDEAKFEKKVEELEGTTRQYHVMADRLQLIPSTAKHAEGVNFQIKLNA-SLDDPSEVFNVDMKNKLKPALNALRESYAKKTRLVTEEMTEIQEKVDSAE 479
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A0D2JWS7_9CHLO (Kinetochore protein NDC80 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JWS7_9CHLO) HSP 1 Score: 209 bits (532), Expect = 6.920e-56 Identity = 154/517 (29.79%), Postives = 250/517 (48.36%), Query Frame = 1
Query: 142 KRSSNFGT--AAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDI----ADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQA----------------------------------LQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALE 1572
+RSS FG A +K DPRP+ DKNF N IR ++ YL+ +GY +S KILT P+G+DF I+ FLF++FDP+ + + EDEV F K ++YPF +SKS L AVG+P SWP LAA++W+VELL Y+++ E D G +D ++ AF+EY+ +Y FL+GD+ +++++G + + +E + + + AL E + + L + +C+ D KF + + + KVE+R AE K L + ++ LR ++ANQ LS DV R+ ER +L+ + + E + ++R +E E+++ R L+ LE +V N A + L L+PA+AK A G ++EL ++R E + ++ D++G I+P L A+R+ R ++ E L L + +A+ YR +D LD M QA ++
Sbjct: 4 RRSSAFGKGGAGLKADPRPLGDKNFLNACIRTVITYLSTHGYPYAVSPKILTSPTGKDFAQIVQFLFQRFDPSMKVF--GKVEDEVPLFFKRLNYPFQISKSALFAVGSPHSWPSVLAALTWLVELLNYEEKA---EEAAADPAGPGSLDSDRQRSERAFYEYVAGSYRSFLSGDDVRCAQADEEMLGQIRDREGALTSELERLRESSDALGRTLESLRTAPSPLVAATAARDECSRDKAKFEAALENMRAAKVTCARKVEERKAELTSRKQQLADILQENDQLRAQIANQSLSRA-----------DVNRLLAERGKLKGVLDSVVEAREGLERRAYEQELKVERSLKELEESVRQYNLAAHSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARLALIPASAKRAGGTNFELSVSRGE-EAPQGLVGADIKGSIKPGLVALRERYRGRARDLAEDGLGLAEQLDAAREAVRERAEDEANAKLQVQRLEVAYRALRDELDGDMRTTGEQADRIK 503 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6873 ID=mRNA_6873|Name=jgi.p|Trimin1|348554|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2207bp|location=Sequence derived from alignment at Contig_27:67107..72613+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCTGCCCCAGGCCGCATGAGCCTCAACGTAGGAAACGCGATGGGGAGback to top protein sequence of jgi.p|Trimin1|348554 >Trimin1|348554|estExt_Genemark1.C_Ctg_270008 ID=Trimin1|348554|estExt_Genemark1.C_Ctg_270008|Name=jgi.p|Trimin1|348554|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=624bp MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRSback to top mRNA from alignment at Contig_27:67107..72613+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6873 ID=mRNA_6873|Name=jgi.p|Trimin1|348554|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5507bp|location=Sequence derived from alignment at Contig_27:67107..72613+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_27:67107..72613+ >mRNA_6873 ID=mRNA_6873|Name=jgi.p|Trimin1|348554|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1872bp|location=Sequence derived from alignment at Contig_27:67107..72613+ (Tribonema minus UTEX_B_3156 )back to top |