mRNA_6842 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350321
Unique Name	mRNA_6842
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835YN25_9STRA (Protein tyrosine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN25_9STRA)

HSP 1 Score: 382 bits (980), Expect = 1.400e-130
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 3

Query:   93 MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV 692
            MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV
Sbjct:    1 MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV 200

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835ZE75_9STRA (Protein tyrosine phosphatase type IVA protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE75_9STRA)

HSP 1 Score: 234 bits (598), Expect = 5.800e-73
Identity = 129/187 (68.98%), Postives = 142/187 (75.94%), Query Frame = 3

Query:   93 MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHK 653
            M L   +SLAT+PSL+EW N+KGRKLSFLIMDAPKAHNL +YLKECK+HNVV MVRVCE TYPA+EV RAGI M  MEY DG APP EII  WLDVVD T                XXXXXX    PT+AVHCVAGLGRAPVLVAIALIE+GM+   AVEYIR RRRGAINRKQL+YLE+Y   RH+
Sbjct:    1 MVLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVT----------GXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHR 177

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: D7FKQ1_ECTSI (Protein tyrosine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ1_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 6.710e-60
Identity = 114/187 (60.96%), Postives = 132/187 (70.59%), Query Frame = 3

Query:   90 NMALAQVSSLATK---PSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQR 641
            N AL +V + AT    PSLVEW     +KL F+IMDAPKA+NL +Y++E KK NVV +VRVCE TYPA EVE AGI + EMEYDDG APP EII  WLDVV  TF +   S+  +   G           PT+AVHCVAGLGRAPVLVAIALIE G +  +AVEYIR RRRGAINRKQLSYL+ Y+R
Sbjct:   23 NTALGRVEAAATMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGIKLLEMEYDDGGAPPVEIINKWLDVVQTTFHNAPDSSGPNGSEG-----------PTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYER 193

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A6H5KJ35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ35_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 2.980e-58
Identity = 115/194 (59.28%), Postives = 134/194 (69.07%), Query Frame = 3

Query:   90 NMALAQVSSLATK---PSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGS 662
            N AL +V   AT    PSLVEW     +KL F+IMDAPKA+NL +Y++E KK NVV +VRVCE TYPA EVE AG+ + EMEYDDG APP EII  WL+VV  TF +   S+  +   G           PT+AVHCVAGLGRAPVLVAIALIE G +  +AVEYIR RRRGAINRKQLSYL+ Y+R R  G S
Sbjct:   34 NTALGRVEPAATMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPVEIINKWLNVVKTTFHNAPDSSGPNGSEG-----------PTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYER-RSSGNS 210

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7S3GSY3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSY3_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.130e-50
Identity = 96/186 (51.61%), Postives = 122/186 (65.59%), Query Frame = 3

Query:   99 LAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKG 656
            ++  +SL  KPSL+EW       L  LIMDAPK  NL +YLK+CKK NV  +VR+ E +Y  +EVE++GIA+ EM Y DG +PPP++I  WL V+  TF + GP                   TP +A+HCVAGLGRAPVLVAIALIE GM++  AV +IR RRRGAIN  QL+YLE Y+ +R KG
Sbjct:    1 MSSANSLVNKPSLIEW-----GPLRLLIMDAPKDSNLHLYLKQCKKSNVTSIVRISEPSYSREEVEKSGIALHEMYYPDGHSPPPDVIARWLTVLADTFDNKGPDE-----------------TPCIAIHCVAGLGRAPVLVAIALIEYGMDAISAVTFIRERRRGAINTVQLNYLESYKPMRKKG 164

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7R9Y7Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7Z4_9STRA)

HSP 1 Score: 170 bits (431), Expect = 5.600e-48
Identity = 101/182 (55.49%), Postives = 118/182 (64.84%), Query Frame = 3

Query:  114 SLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIE-NGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKG 656
            SLA +PSLVE  + +     FLI+DAPK H+LP YL ECKK+NVV +VRVC+ TY A+ VE AGI M EMEY DG  PP E+I  WLDVV+ TF +   +  D                P +AVHCVAGLGRAPVLVAIALIE   +E +EAV  IR +RRGAIN KQL YLE Y   R  G
Sbjct:   14 SLAGRPSLVEVDDMR-----FLILDAPKEHDLPQYLLECKKNNVVHLVRVCQPTYNAEHVESAGIHMHEMEYADGSHPPQEVIDKWLDVVEQTFSAKAVAKADEK--------------PCIAVHCVAGLGRAPVLVAIALIEFAALEPTEAVTLIRKQRRGAINSKQLQYLESYVATRAGG 176

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7S1UGF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGF3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.660e-46
Identity = 96/176 (54.55%), Postives = 116/176 (65.91%), Query Frame = 3

Query:  114 SLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIE-NGMESSEAVEYIRARRRGAINRKQLSYLEQYQ 638
            +LA +PSLVE          FLI DAPK  NLP YL ECKK NV  +VRVC++TYP+ +VE AGI+M EMEY DG  PP +II  WLDVV+  F   GP    +  +        +G  P + VHCVAGLGRAPVLVAIAL+E  GM+  EAV  IR +RRGAIN KQL +LE+Y+
Sbjct:   12 TLAGRPSLVE-----SNGYRFLIFDAPKEENLPQYLLECKKQNVSHLVRVCQQTYPSSQVESAGISMHEMEYADGTNPPDDIIEKWLDVVEDCF---GPKPASAAAS--------DGAAPCLGVHCVAGLGRAPVLVAIALVEFTGMDPVEAVAMIRKQRRGAINSKQLFWLERYR 171

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: H3GU63_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GU63_PHYRM)

HSP 1 Score: 163 bits (412), Expect = 2.410e-45
Identity = 89/171 (52.05%), Postives = 114/171 (66.67%), Query Frame = 3

Query:  126 KPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQ 638
            KP++V+W +     LSF+IMDAP   NL IYLKE KKHNV  +VR CE TY ++ VE AGI + E+E+ DG +P PEI+  WLD+V+  F+     A ++                ++AVHCVAGLGRAPVLVAIALIE G++   AVE+IR  RRGAIN +QL YLE+YQ
Sbjct:    7 KPTMVKWEH-----LSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLVEECFKDNSIDAKNNK---------------SIAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQ 157

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7S2XV81_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV81_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.640e-45
Identity = 93/169 (55.03%), Postives = 107/169 (63.31%), Query Frame = 3

Query:  138 VEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRS---GGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQY 635
            VEW       L FLIMD P+ HNL +Y+KE K +NV  +VRVCEK Y A EVE+AGI M EME+DDG +PP  II  WL +VD TF+    G PS+                  P +AVHCVAGLGRAPVLVAIA IE G +    V+YIR RRRGAIN KQL YLE Y
Sbjct:    1 VEW-----GPLRFLIMDTPREHNLHLYIKEMKNNNVTDVVRVCEKAYSAAEVEKAGIRMHEMEFDDGDSPPGGIITDWLHLVDETFKGVKEGNPSS------------------PAIAVHCVAGLGRAPVLVAIACIERGADPLHIVKYIRNRRRGAINAKQLMYLENY 146

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A485KIA3_9STRA (Aste57867_5759 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIA3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.720e-45
Identity = 93/178 (52.25%), Postives = 114/178 (64.04%), Query Frame = 3

Query:  126 KPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGG 659
            KPS V++      +LSFLI+DAP   NLP+Y+KE KK+ V  +VR CE TY    VE AG  + EME+ DG  P  EII  WLD+V+ TF+      N  ++AG            T+AVHCVAGLGRAPVLVAIALIENG++   AVE+IR  RRGAIN +QL YLE+YQ  R   G
Sbjct:    7 KPSHVQY-----EQLSFLILDAPNDTNLPLYVKEFKKYQVTDIVRACESTYSCTSVESAGFRLHEMEFPDGDPPSAEIINQWLDLVETTFKD-----NSKVNAGNNPNDK------TIAVHCVAGLGRAPVLVAIALIENGLDVINAVEHIRQSRRGAINLRQLKYLEKYQPTRKDKG 168

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A836CBU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU1_9STRA)

HSP 1 Score: 918 bits (2373), Expect = 0.000e+0
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG 1353
            MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG
Sbjct:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG 451

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835ZEL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL6_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 4.350e-138
Identity = 230/280 (82.14%), Postives = 239/280 (85.36%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKER---GQVTRTEQ-------DLELL-STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVN AQ HEPSHT RLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK     G   R  +       D+  + STYIQVHFQRRRLAIT+WALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARL+QLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQ QQLYVET+RTDYQELMSG FEQFPNDAAARREN DAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNIAQGHEPSHTHRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLDQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQPQQLYVETDRTDYQELMSGLFEQFPNDAAARRENTDAVWGLLP 280

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835YXL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL0_9STRA)

HSP 1 Score: 419 bits (1076), Expect = 1.380e-135
Identity = 226/299 (75.59%), Postives = 238/299 (79.60%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILG DQGV+LRH TVSCSLAKVLHRHPSLDI QTLQ+AADYVGK      +R Q  R   +L+ L                         TYI+VHFQRRRLAITYWALFQALRAHI NDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHG LQARLNQLGFRGAEL              ILDICETVRHLP+GDSD+SKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DA ARRE+RDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGTDQGVQLRHNTVSCSLAKVLHRHPSLDITQTLQDAADYVGKLPASTHQRFQDLRHNSNLQALQAPWAPWRLHEVFLYVAKDMATVAKTYIEVHFQRRRLAITYWALFQALRAHITNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGGLQARLNQLGFRGAELDDDGDVQEGADHLKILDICETVRHLPDGDSDSSKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDATARREHRDAVWGLLP 299

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A836CQS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQS9_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 3.370e-129
Identity = 230/355 (64.79%), Postives = 242/355 (68.17%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTR+LHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IA+TLQ+A DYVGK                                                              +R Q  R   +L+ L                        STYIQVHFQRRRLAIT+WALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVT YAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMS  FEQFP+DAAARRENRDAVWGLLP
Sbjct:  232 MADLVERLINRFGQAAVNTAQGHEPSHTRQLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIARTLQDATDYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTIYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSELFEQFPDDAAARRENRDAVWGLLP 586

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835Z9D2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D2_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 2.740e-127
Identity = 230/352 (65.34%), Postives = 240/352 (68.18%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWG 756
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK                                                              +R Q  R   +L+ L                         TY +VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DAAARRENRDAVWG
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTRKLDLGQPFPDATQRFYMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDMATVAKTYTEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDNDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWG 352

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BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A836CNV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV6_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 5.180e-127
Identity = 239/378 (63.23%), Postives = 250/378 (66.14%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFP 834
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK                                                              +R Q  R   +L+ L                        STYIQVHFQRRRLAIT+WALF ALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DAAARRENRDAVWGLLP           P+    VPR  P
Sbjct:  744 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFHALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWGLLPVP---------PKLTAPVPRFKP 1112

[Close]

BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835YWJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ2_9STRA)

HSP 1 Score: 402 bits (1033), Expect = 3.380e-125
Identity = 234/355 (65.92%), Postives = 241/355 (67.89%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKER-----------------GQ------------------------VTRTE---------------QDL------------------------------ELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK R                 GQ                         T  E               QDL                                  TYI+VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRP TRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRR LAQLQQLYVET+R DYQ+LMSG FEQFP+DAAARRENRDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGEGPGAAQLPPSTLQRFQDLCHNSNLQALQATWPPWRLHEVFLYVAKDMATAAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPLTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRHLAQLQQLYVETDRADYQDLMSGLFEQFPDDAAARRENRDAVWGLLP 355

[Close]

BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835YJ56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ56_9STRA)

HSP 1 Score: 406 bits (1043), Expect = 1.010e-123
Identity = 234/356 (65.73%), Postives = 243/356 (68.26%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAI-TYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL++AQTLQ+AADYVGK                                                              +R Q  R   +L+ L                        STYIQVHFQRRRLAI TYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGE QARLNQLGFRGAEL              ILDICETVRHLP+GDSDASK RLLAQLQQLYVET+RTDYQELMSG FEQFP+DAAARRENRDAVWGLLP
Sbjct:  277 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEMAQTLQDAADYVGKVRHLASLLANYICTWKLHHGQPFPDATQRYFMECLTCYVQGAGAAYTNGAGPGAAQLPASTLQRFQDLRNNSNLQALQATWAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAIITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGEPQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKHRLLAQLQQLYVETDRTDYQELMSGLFEQFPDDAAARRENRDAVWGLLP 632

[Close]

BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835Z8U0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U0_9STRA)

HSP 1 Score: 380 bits (975), Expect = 4.290e-120
Identity = 227/390 (58.21%), Postives = 239/390 (61.28%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTR-----------------------------------AVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQEHEP HTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCS+AKVLHRHPSL+IAQTLQ+AADYVGK                                                              +R Q  R   +L+ L                         TYI+VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFT                                    AVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+ TDYQ+LMS  F Q+P+D AARRENRDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQEHEPLHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSIAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDIATVAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTSQAWMWPASTVRATVLVCHPTYELPLAKLIARVAPTAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGANCLMILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDCTDYQDLMSELFGQYPDDTAARRENRDAVWGLLP 390

[Close]

BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835Z9G0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G0_9STRA)

HSP 1 Score: 332 bits (852), Expect = 3.390e-108
Identity = 199/341 (58.36%), Postives = 207/341 (60.70%), Query Frame = 1

Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVL RHPSLDIAQTLQEAA YVGK                                                              +R Q  R   +L+ L                         TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTR   G   L                           ILDICETV H P+GDSDASKRRLLAQLQQLYVET+RTDY++LM G FEQFP+DAAARRENRDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLQRHPSLDIAQTLQEAAVYVGKVRHLASLLANYICTWKLHHGQPFPDATQRFYMECSTCFVKGAGAGYTNGAGPGAAQVPPSTLQRFQYLRHNSNLQALQATWPPWRLHEVFLYVAKDMATVAKTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRRAEGADYLK--------------------------ILDICETVHHSPDGDSDASKRRLLAQLQQLYVETDRTDYRDLMPGLFEQFPDDAAARRENRDAVWGLLP 315

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350321 vs. uniprot
BLAST of jgi.p|Trimin1|350321 vs. uniprot

BLAST of jgi.p|Trimin1|350321 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YN25_9STRA	1.400e-130	100.00	Protein tyrosine phosphatase n=1 Tax=Tribonema min...	[more]
A0A835ZE75_9STRA	5.800e-73	68.98	Protein tyrosine phosphatase type IVA protein 1 n=...	[more]
D7FKQ1_ECTSI	6.710e-60	60.96	Protein tyrosine phosphatase n=1 Tax=Ectocarpus si...	[more]
A0A6H5KJ35_9PHAE	2.980e-58	59.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3GSY3_9STRA	1.130e-50	51.61	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7R9Y7Z4_9STRA	5.600e-48	55.49	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S1UGF3_9STRA	1.660e-46	54.55	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
H3GU63_PHYRM	2.410e-45	52.05	Uncharacterized protein n=24 Tax=Peronosporaceae T...	[more]
A0A7S2XV81_9STRA	2.640e-45	55.03	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A485KIA3_9STRA	2.720e-45	52.25	Aste57867_5759 protein n=1 Tax=Aphanomyces stellat...	[more]

Pages

BLAST of jgi.p|Trimin1|350321 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CBU1_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZEL6_9STRA	4.350e-138	82.14	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YXL0_9STRA	1.380e-135	75.59	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CQS9_9STRA	3.370e-129	64.79	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z9D2_9STRA	2.740e-127	65.34	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CNV6_9STRA	5.180e-127	63.23	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YWJ2_9STRA	3.380e-125	65.92	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YJ56_9STRA	1.010e-123	65.73	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z8U0_9STRA	4.290e-120	58.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z9G0_9STRA	3.390e-108	58.36	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_60	contig	Contig_60:670320..673102 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350321\|estExt_Genemark1.C_Ctg_600098
BRITE	ko00000,ko01000,ko01009
KEGG ko	ko:K18041
EC	3.1.3.48
Description	protein tyrosine phosphatase activity
COG category	T
Max annot lvl	4776\|Peronosporales
EggNOG OGs	KOG2836@1\|root,KOG2836@2759\|Eukaryota,3QAQB@4776\|Peronosporales
Evalue	9.7e-49
Seed ortholog	4792.ETI33265
Hectar predicted targeting category	other localisation
TranscriptId	350643
Track	FilteredModels1
ProteinId	350321

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350321	gene_6842	Tribonema minus UTEX_B_3156	gene	Contig_60 670320..673102 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350321	Trimin1\|350321\|estExt_Genemark1.C_Ctg_600098	Tribonema minus UTEX_B_3156	polypeptide	Contig_60 670805..671909 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6842_4	exon_6842_4	Tribonema minus UTEX_B_3156	exon	Contig_60 670320..670841 -
exon_6842_3	exon_6842_3	Tribonema minus UTEX_B_3156	exon	Contig_60 670956..671368 -
exon_6842_2	exon_6842_2	Tribonema minus UTEX_B_3156	exon	Contig_60 671757..671914 -
exon_6842_1	exon_6842_1	Tribonema minus UTEX_B_3156	exon	Contig_60 673016..673102 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_6842	UTR3_6842	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_60 670320..670804 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6842	CDS_6842	Tribonema minus UTEX_B_3156	CDS	Contig_60 671757..671909 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_6842	UTR5_6842	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_60 673016..673102 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_60:670320..673102-
coding sequence from alignment at Contig_60:670320..673102-

spliced messenger RNA

>mRNA_6842 ID=mRNA_6842|Name=jgi.p|Trimin1|350321|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1180bp|location=Sequence derived from alignment at Contig_60:670320..673102- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTCCTTGACTGCTGCAAGGCGAATTAGGATCAGCGTGCCACGCGCAGCCT
TGATCCCTGCGGGCTGGCTGCGGTAACAAAGTTATTGTAAACATGGCGCT
CGCGCAAGTATCGTCGCTGGCGACGAAGCCCTCCCTCGTGGAGTGGGTGA
ACCGCAAGGGGCGGAAGCTGAGCTTCCTGATCATGGACGCACCGAAGGCG
CACAATCTGCCCATCTACCTGAAGGAGTGCAAGAAGCACAATGTGGTGCG
CATGGTGCGCGTGTGCGAGAAAACGTACCCCGCCGACGAGGTCGAGCGCG
CGGGCATCGCCATGTCGGAGATGGAGTACGACGACGGCATGGCGCCGCCG
CCGGAGATCATCCGCAGCTGGCTCGACGTCGTCGACGCGACGTTCCGCAG
CGGCGGGCCCAGCGCCAACGACAGCATGCACGCAGGCGGCGGCGGCGGCG
GGGCTGGTGAGGGCGGCACGCCGACGGTCGCCGTGCACTGCGTGGCGGGG
CTCGGCAGGGCGCCCGTGCTCGTCGCCATCGCGCTCATCGAAAACGGCAT
GGAGTCGAGCGAGGCGGTGGAGTACATTCGCGCGCGGCGCCGCGGCGCCA
TCAACCGCAAGCAGCTCTCGTACCTGGAGCAGTACCAGCGCATACGCCAC
AAGGGCGGTTCACTCGAGACGGAGCGCATCTGGACTGTTGTCTAGGGAGG
GGTGGCACGGCGCGGGCACATGCTTGGAATAATGGCGCCTGCGGGGTGGG
CAGCGCTGGGGCGGTGCTGGTGCCGGAGGAAGCAGCGGCTGCTGCGCTAC
GCGCGCACTGCTGCGGGAGGAGCGGAGAGGCACCGCCGTACACGTTTTGG
CAAGCGAGGGTTTTCCGGCCTAGTACAGGGGCAAGTGCAGGTGGCAGGCG
TCGCTGATTTCGACATTTTGATTGTGTCTGCCGTGCGCGTACACACACAC
ACACACATATGCCCCCCCCCCCTCCTCTCTCGTCGTAGTGCCAAGGCGCA
TAAGACATGTGTCGCACAGTCGCTTCCCATCAATGTGCATCCCATCAATG
TGCATTTTTAGATGCACCGTCGATTCACTCCCTGAGGCGCCACGGCAATC
GTGGCCGCCTGAGGCGATGCAGCTGGCCTGTGTTTGCGTCTCTTAAACAC
GATCCCCTAATGCACACATGCAACGCTGCT

protein sequence of jgi.p|Trimin1|350321

>Trimin1|350321|estExt_Genemark1.C_Ctg_600098 ID=Trimin1|350321|estExt_Genemark1.C_Ctg_600098|Name=jgi.p|Trimin1|350321|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp
MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHN
VVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDAT
FRSGGPSANDSMHAGGGGGGAGEGGTPTVAVHCVAGLGRAPVLVAIALIE
NGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV
*

mRNA from alignment at Contig_60:670320..673102-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6842 ID=mRNA_6842|Name=jgi.p|Trimin1|350321|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2783bp|location=Sequence derived from alignment at Contig_60:670320..673102- (Tribonema minus UTEX_B_3156 )
CTCCTTGACTGCTGCAAGGCGAATTAGGATCAGCGTGCCACGCGCAGCCT
TGATCCCTGCGGGCTGGCTGCGGTAACAAAGTTATTGGTGAGTGCCCCTA
TCTCCAGCAGAAGCCTTGCTTTCCGGCAGGGCTGGTGGTGACGCCTGGCA
CGTATCATTCGTGCCGTAGGCCGGCGATCTGTGCAGCGCTCAGATTTATC
CGGCTCGGCGACACGCCCAAGGTTGACGCTGCGCGCGACGCTCAGTCGTG
TTGTCCTCGGCCCTCTTGTAATGGGTCACACCCGCCTTCGCCTCAACTCA
GCGACGAGTGAAGGCCTGTTGGCATCGCCTAAGCCTTGCTTGTGCCATTA
TCGTTGTGTTGAAGCTGCTGGTCTCCAGTCGCCGCCCGGCAGCGAGTGCT
GTGCTCGCGCCACAAGCTGCCGTTCATATTTCGCCGTGGCGGGTCGGGGT
CGGTCACAACACCGCGCTGAGATCGGAAGACGCGGATCGGATATGTGATC
ATGCCTTATGGTGATGGAGGTTGGCAGCAGGGCCGCCTCGCTGGCGCCGA
CAGTCGCAGTCGCCAGTGCGTTGGTTGAATTGGTGCGATTTGATGGGCAA
TCACTTGGTCCAACGCCACCGTGCTGTCGAGATGATGGCGTGCGCAGCTG
CCATCGCGCACAGCATTGCACGTGTGTTGCTGTCAGGTTCTGCTGTACCC
CGATGCACTTTCCTTGCAACGTGCTCTTTCTTTGTTGTTGTCGAGGAACA
CACACACATGTATCTCTGACCTCACCCCTCTGTTCGTACATAGGGCAGGA
CCGCTTGCGGCGTGCAGTTCAGCTCTTTTGTTCCAAGGCCCTCATGTGCT
GTCATGCCATACGTGTTGAAAGTGGATATTTTGAGCGTCAACAGCGGCAG
ACAGCACACAGCACCTTCATGCTGACCATCTTGATGTGCTTCGAAGGACA
AGTTGGACCAGGTTGAAGTACACATGTTGCTGTGTTTTGTTAGGTTGCGC
TACAGAGTTGGGCAGTGCTCTGCCTCCCTTGGTTCTACAGAAACAAAGCC
AGGTACCTGAAACAAGGAGCCTGCAACCTGCAGAGCTTCATTTCGACCTG
CACAAGCCAGGTGTTTGGCGCTGCTGCAACTGGTGCGCCATTTCTAAACT
CCCGGTTGCGTTCTGATGCTGCTCTCAACTTGCTGCAGTAAACATGGCGC
TCGCGCAAGTATCGTCGCTGGCGACGAAGCCCTCCCTCGTGGAGTGGGTG
AACCGCAAGGGGCGGAAGCTGAGCTTCCTGATCATGGACGCACCGAAGGC
GCACAATCTGCCCATCTACCTGAAGGAGTGCAAGAAGCACAATGTGGTGA
GTCGCGCGCAGCCTGTGACGCGCCTGTTCAGCACTTCGCGGTACATACCG
TCTGCAGTGGACATAACTGGCTGAGCTCCGCTCTTGAACAGCTTGCTCGT
ATACAGCGCTGGCCACCAGTACAGGCGCAATGAGCAAGCCCCCCCCCCTC
TTTCTGCCCAGCCGTCGGCCTGCCTCACTCGCTCTCGCGCCACCAGCCAG
TACAGGCGCGATGAGCAAGCCCCCCCCCCCTCTTTCTGCCCAGCCGTCGG
CCTGCTTCACTCGCTCTCGCGCCACCAGCCCCCAAGAGCCCCACTGCTCG
CGCGCACGCTGCCGGCGCCCGGCACCAGCCCCCAAGTGCCCCACCCACTG
CTCACGCACACGCTACCGCCGCCTATGCGCGCAGGTGCGCATGGTGCGCG
TGTGCGAGAAAACGTACCCCGCCGACGAGGTCGAGCGCGCGGGCATCGCC
ATGTCGGAGATGGAGTACGACGACGGCATGGCGCCGCCGCCGGAGATCAT
CCGCAGCTGGCTCGACGTCGTCGACGCGACGTTCCGCAGCGGCGGGCCCA
GCGCCAACGACAGCATGCACGCAGGCGGCGGCGGCGGCGGGGCTGGTGAG
GGCGGCACGCCGACGGTCGCCGTGCACTGCGTGGCGGGGCTCGGCAGGGC
GCCCGTGCTCGTCGCCATCGCGCTCATCGAAAACGGCATGGAGTCGAGCG
AGGCGGTGGAGTACATTCGCGCGCGGCGCCGCGGCGCCATCAACCGCAAG
CAGCTCTCGTACCTGGAGCAGTACCAGCGCATACGCCACAAGGGCGGGTG
CGCGTCGTGCGCCGTCATGTGACTGCGGCGGCGGCAGCGGCGGCCGGTCG
CGCGCTGCAGCGCAGCGCAATCGTCGAGTGCAGTGCCGGCAGCGCCGGCC
GCGTGCCGCAGTTCACTCGAGACGGAGCGCATCTGGACTGTTGTCTAGGG
AGGGGTGGCACGGCGCGGGCACATGCTTGGAATAATGGCGCCTGCGGGGT
GGGCAGCGCTGGGGCGGTGCTGGTGCCGGAGGAAGCAGCGGCTGCTGCGC
TACGCGCGCACTGCTGCGGGAGGAGCGGAGAGGCACCGCCGTACACGTTT
TGGCAAGCGAGGGTTTTCCGGCCTAGTACAGGGGCAAGTGCAGGTGGCAG
GCGTCGCTGATTTCGACATTTTGATTGTGTCTGCCGTGCGCGTACACACA
CACACACACATATGCCCCCCCCCCCTCCTCTCTCGTCGTAGTGCCAAGGC
GCATAAGACATGTGTCGCACAGTCGCTTCCCATCAATGTGCATCCCATCA
ATGTGCATTTTTAGATGCACCGTCGATTCACTCCCTGAGGCGCCACGGCA
ATCGTGGCCGCCTGAGGCGATGCAGCTGGCCTGTGTTTGCGTCTCTTAAA
CACGATCCCCTAATGCACACATGCAACGCTGCT

Coding sequence (CDS) from alignment at Contig_60:670320..673102-

>mRNA_6842 ID=mRNA_6842|Name=jgi.p|Trimin1|350321|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=603bp|location=Sequence derived from alignment at Contig_60:670320..673102- (Tribonema minus UTEX_B_3156 )
ATGGCGCTCGCGCAAGTATCGTCGCTGGCGACGAAGCCCTCCCTCGTGGA
GTGGGTGAACCGCAAGGGGCGGAAGCTGAGCTTCCTGATCATGGACGCAC
CGAAGGCGCACAATCTGCCCATCTACCTGAAGGAGTGCAAGAAGCACAAT
GTGGTGCGCATGGTGCGCGTGTGCGAGAAAACGTACCCCGCCGACGAGGT
CGAGCGCGCGGGCATCGCCATGTCGGAGATGGAGTACGACGACGGCATGG
CGCCGCCGCCGGAGATCATCCGCAGCTGGCTCGACGTCGTCGACGCGACG
TTCCGCAGCGGCGGGCCCAGCGCCAACGACAGCATGCACGCAGGCGGCGG
CGGCGGCGGGGCTGGTGAGGGCGGCACGCCGACGGTCGCCGTGCACTGCG
TGGCGGGGCTCGGCAGGGCGCCCGTGCTCGTCGCCATCGCGCTCATCGAA
AACGGCATGGAGTCGAGCGAGGCGGTGGAGTACATTCGCGCGCGGCGCCG
CGGCGCCATCAACCGCAAGCAGCTCTCGTACCTGGAGCAGTACCAGCGCA
TACGCCACAAGGGCGGTTCACTCGAGACGGAGCGCATCTGGACTGTTGTC
TAG