mRNA_6773 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350272
Unique NamemRNA_6773
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A836CAB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB8_9STRA)

HSP 1 Score: 520 bits (1340), Expect = 2.830e-186
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1
Query:    1 MKESSADELKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLISATKKPSSVKPSSGSAKKKGXXXXXXXXXXXXSGASQPTMKAFFNSVS 813
            MKESSADELKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLISATKKPSSVKPSSGSAKKKGXXXXXXXXXXXXSGASQPTMKAFFNSVS
Sbjct:    1 MKESSADELKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLISATKKPSSVKPSSGSAKKKGXXXXXXXXXXXXSGASQPTMKAFFNSVS 271          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A7V3SAN8_9CHLR (DUF72 domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7V3SAN8_9CHLR)

HSP 1 Score: 147 bits (371), Expect = 1.120e-39
Identity = 90/214 (42.06%), Postives = 127/214 (59.35%), Query Frame = 1
Query:   25 LKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTL 666
            L++YG    + EINS+FY LP  +  A+WR++ P  F F++KVS+ ITH  +L   E+A Q F+ARA   L  KLGPCL+QLPPS+ +D  RL+    L+    P  +   EFR+ +WF   ++++LR RN AL       GS  T  E TAD++Y R+HG    RG    + D EL ++AE+ A R  A  R  Y++F ND    A++NAQ L
Sbjct:   31 LEFYGRHFSTLEINSSFYHLPTEKAFARWRDSSPAGFVFAVKVSRFITHIKKLADCEEALQTFFARARV-LGEKLGPCLYQLPPSMGRDDERLKAFVGLL---PPDLRHVFEFRNDSWFDPGIYKILRDRNIALC--IYDMGSRPTPCETTADFSYIRFHGSASRRGC---YSDVELLQWAERIA-RMEAQTRVVYIYFNNDAQGFALKNAQRL 234          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A850M1H6_9ARCH (DUF72 domain-containing protein n=1 Tax=Candidatus Helarchaeota archaeon TaxID=2719382 RepID=A0A850M1H6_9ARCH)

HSP 1 Score: 140 bits (353), Expect = 5.650e-37
Identity = 84/217 (38.71%), Postives = 121/217 (55.76%), Query Frame = 1
Query:   25 LKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQ--DVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLI 669
            L+YY +   S EINSTFY +P+ +T   WR  VPE F F +K S+ ITH  RL+GIE+  + F      G + KLGP LFQ PPSL  +   L DL   V+   +S   +I  EFR+ TWFC+++F++L+  N ++   FS        +  TAD+ Y R HG  +   + + + D+EL+  AEK     +   +  YV+F ND    AV+NA  L+
Sbjct:   33 LEYYSNYFDSVEINSTFYRIPKEKTVENWRKRVPENFTFIVKASRIITHLKRLKGIEEILKNFLD-ICSGFEEKLGPILFQTPPSLKINKDHLLDLLDNVKLHPLSKNLRIVFEFRNKTWFCKEIFEILKKANCSIC--FSDMLGFEIDEPVTADFVYIRRHGAQER--YSSSYSDEELKPDAEKIKKWVKEN-KDVYVYFNNDAYGYAVKNALRLV 243          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A7S4J072_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J072_9STRA)

HSP 1 Score: 140 bits (352), Expect = 6.090e-37
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 1
Query:   22 ELKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAE-GLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQA-QIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTA 480
            EL++Y  V  + EIN+TF+G+PR ET   W       F+F  KV ++ITHDARL G+ + W+ F  R +  G    LGP LFQLPPSL KD+++L  +     DV+P   + A EFR+ TW+C +V+++LR   WA+ EN SPD S     E TA
Sbjct:   87 ELRHYSGVFSAVEINATFHGIPREETVDSWSRDAKSGFQFGWKVPRAITHDARLSGLGETWEVFLDRISRIGETRSLGPILFQLPPSLVKDISKLDAIA----DVTPSGMKFAFEFRNETWYCSEVYEVLRRMQWAICENISPDSSTIRSMEVTA 237          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A1W1IAH5_9BACT (Uncharacterized protein n=1 Tax=Nitrospira japonica TaxID=1325564 RepID=A0A1W1IAH5_9BACT)

HSP 1 Score: 137 bits (344), Expect = 1.840e-35
Identity = 83/222 (37.39%), Postives = 120/222 (54.05%), Query Frame = 1
Query:   25 LKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLISATKKPS 690
            L+++    P+ E+N +FY LP+  T  KW + VP+ F FS+K S+ ITH  RL+ +ED W+ F + A   L   LGP LFQ P S  +D  RL+D  ++V+  S + ++  EFR  +WF   V++LL     AL       G     D  TAD+ Y R+HG   +R   +++   EL   A K     R G  A YV+F ND +  AV NA+T +   +KPS
Sbjct:   44 LEFFTGQFPTTEVNYSFYHLPKPSTYEKWASQVPQDFIFSVKASRYITHVKRLKDVEDPWRLFLSHA-RSLGTHLGPILFQFPESFHRDDDRLKDFLEMVRRGSSRLRLVCEFRHESWFSTGVYRLLNRLGAALC--IGDSGRYPRRDVVTADFAYVRFHGR--SRLFASNYTRRELDEEARKVKGYLRDGYDA-YVYFNNDAEGHAVANAKTFMGLIEKPS 259          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A0L0DM04_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DM04_THETB)

HSP 1 Score: 139 bits (350), Expect = 1.890e-35
Identity = 80/220 (36.36%), Postives = 126/220 (57.27%), Query Frame = 1
Query:   22 ELKYYGSVLPSCEINSTFYGLPRTETCAKW-RNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQ-HKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQA--QIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLI 669
            E  +Y +  P+CE+N++FYG+PR  T   W + A    F++++KV KS+TH+++L    D  +  + R A   +   LGP LFQLPP   + + +LQ L  ++ ++  +   ++A EFR  +WF  DV+ +LRA NWALV +  PD  +   +E TADWTY R+HG+     H  ++ DDEL  +  +   R  A  +  + +F  D  +T + NA TLI
Sbjct:   40 EFFHYANRYPTCEMNTSFYGIPRESTIQGWAKQATGRSFQYAIKVPKSVTHESQLEDPGDTIRFLWKRLAPLRKVGALGPLLFQLPPRFARSLDKLQQLALVLHELDDKEHLRVAFEFRHPSWFRADVYAVLRANNWALVLSSHPD--LPWVEELTADWTYIRFHGI--RLLHEDNYTDDELTTFTTRIK-RWLADGKDVFAYFQFDKGSTGLNNAATLI 254          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A538MB24_9ACTN (DUF72 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538MB24_9ACTN)

HSP 1 Score: 135 bits (339), Expect = 5.630e-35
Identity = 81/215 (37.67%), Postives = 117/215 (54.42%), Query Frame = 1
Query:   25 LKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQH-KLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTL 666
            L++Y     + E+N+TFY LPR    A W    P  F F++K+S+ +TH  RLR +  + + FY+R     +  KLGP L+QLPP+  +D  RL    +L+    P  +   EFR  +WF +DV++LLR    ALV   +P+    T  E TADWT+ R+H     RG  +++ + EL  +AE+    AR G    Y +F ND    AVRNA  L
Sbjct:   30 LEFYARHFDTVEVNATFYRLPRESAAAAWERESPPGFLFTVKMSRYVTHIKRLRDLPPSLELFYSRIRPLAESPKLGPVLWQLPPTFRRDDERLAGALELL----PPGRHCFEFRHESWFVDDVYELLRRHGAALVIGDAPERPFQT-HELTADWTFIRFHHGT--RGRNSNYSERELEEWAERIERWARQGD--VYAYFNNDRSGYAVRNALWL 235          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: B5Y7T9_COPPD (Uncharacterized protein n=4 Tax=Coprothermobacter TaxID=68335 RepID=B5Y7T9_COPPD)

HSP 1 Score: 135 bits (339), Expect = 6.250e-35
Identity = 86/216 (39.81%), Postives = 120/216 (55.56%), Query Frame = 1
Query:   25 LKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLIS 672
            L +Y S   S EINSTFY +PR+ T  KW +  P+ F FS+K  K+ITH  RL  +E+    FY  AA  L HKLG  L+QLPPSL KD+T L+   +L+ D  P  + A+E R  +W  +DVF+LL+  N A V +   +  + T    TAD+ Y R HG  +   + + +  DEL+ +A           +  YV+F ND +  AV+NA  L S
Sbjct:   35 LPFYASKFNSVEINSTFYHMPRSATVEKWLDCSPDDFVFSLKAPKTITHIKRLSDVEEVVNRFY-EAASVLAHKLGVVLYQLPPSLKKDLTLLEGFLKLL-DRKPGKK-AVELRHVSWVGDDVFELLKQHNVAFVVSHGDNYPLVTTP--TADFMYVRLHGYPEL--YRSSYSVDELQTWANLIRTWLEQD-KMVYVYFNNDAEGHAVKNALALKS 242          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A836RM75_9BACT (DUF72 domain-containing protein n=1 Tax=Candidatus Stahlbacteria bacterium TaxID=2528828 RepID=A0A836RM75_9BACT)

HSP 1 Score: 134 bits (336), Expect = 1.450e-34
Identity = 81/215 (37.67%), Postives = 118/215 (54.88%), Query Frame = 1
Query:   25 LKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTLI 669
            L YY    P+ E+N TFY LP+ ET  KW N VP  F F++K S+ ITH  R++ +ED+ + F  +   GL  KL   L+QLPP +  D+ R     + ++ +  +   A EFR  TWFC++V+++L+  N AL    SPD    T    TADW Y R+HG  +   + +++   EL+ +AEK     R G    Y++F ND    AV+N   LI
Sbjct:   30 LGYYTEFFPTVELNVTFYRLPKKETFKKWYNEVPGDFVFALKGSRFITHIKRIKEVEDSVRIFKEQT-RGLGRKLEVILWQLPPQMKVDLDRFSRFIKSLRIIKNRH--AFEFRHKTWFCDEVYRILKDYNHALCIADSPDWK--TPLVVTADWFYLRFHGGSEL--YASEYSKQELKGWAEKIKGWKRDG----YIYFNNDYQGFAVKNGIELI 233          
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Match: A0A661IQZ4_9DELT (DUF72 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661IQZ4_9DELT)

HSP 1 Score: 131 bits (330), Expect = 1.350e-33
Identity = 83/215 (38.60%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   25 LKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMKVSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTRLQD-LCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDGSICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGARAQYVFFGNDLDATAVRNAQTL 666
            L+YY     + E+NS FY LP  +T   W++  PE F F++K +++ITH  RLR +E   + F+  AA GL  KLGP LFQLPPSL KD  RL+  L QL     P  + A EFR  +WFC+++++LLR R  AL    SP     +    T+   Y R HG    + + + + ++ELR +A         G    +++F ND  A AV+NA+ L
Sbjct:   31 LEYYAEHFSTVELNSPFYRLPSRKTFEGWKDRTPEGFVFAVKANRTITHLRRLREVEGELERFFY-AARGLGEKLGPILFQLPPSLRKDRARLEGFLAQL-----PPGRYAFEFRHPSWFCDEIYELLRERGIALCVADSP--RFPSVRLVTSSLLYVRLHGST--KLYASCYTEEELRDWASFIRGHLTQGD--AFIYFDNDYAAYAVQNAKEL 233          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350272 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAB8_9STRA2.830e-186100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7V3SAN8_9CHLR1.120e-3942.06DUF72 domain-containing protein n=1 Tax=Dehalococc... [more]
A0A850M1H6_9ARCH5.650e-3738.71DUF72 domain-containing protein n=1 Tax=Candidatus... [more]
A0A7S4J072_9STRA6.090e-3744.52Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1W1IAH5_9BACT1.840e-3537.39Uncharacterized protein n=1 Tax=Nitrospira japonic... [more]
A0A0L0DM04_THETB1.890e-3536.36Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A538MB24_9ACTN5.630e-3537.67DUF72 domain-containing protein n=1 Tax=Actinomyce... [more]
B5Y7T9_COPPD6.250e-3539.81Uncharacterized protein n=4 Tax=Coprothermobacter ... [more]
A0A836RM75_9BACT1.450e-3437.67DUF72 domain-containing protein n=1 Tax=Candidatus... [more]
A0A661IQZ4_9DELT1.350e-3338.60DUF72 domain-containing protein n=1 Tax=Deltaprote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_60contigContig_60:258137..260406 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350272|estExt_Genemark1.C_Ctg_600037
DescriptionProtein of unknown function DUF72
COG categoryS
Max annot lvl33154|Opisthokonta
EggNOG OGsCOG1801@1|root,2S9RJ@2759|Eukaryota,3ASFI@33154|Opisthokonta
Evalue5.88e-45
Seed ortholog946362.XP_004997996.1
Hectar predicted targeting categoryother localisation
TranscriptId350594
TrackFilteredModels1
ProteinId350272
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350272gene_6773Tribonema minus UTEX_B_3156 geneContig_60 258137..260406 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350272Trimin1|350272|estExt_Genemark1.C_Ctg_600037Tribonema minus UTEX_B_3156 polypeptideContig_60 258137..260406 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6773_4exon_6773_4Tribonema minus UTEX_B_3156 exonContig_60 258137..258281 -
exon_6773_3exon_6773_3Tribonema minus UTEX_B_3156 exonContig_60 259211..259749 -
exon_6773_2exon_6773_2Tribonema minus UTEX_B_3156 exonContig_60 260103..260219 -
exon_6773_1exon_6773_1Tribonema minus UTEX_B_3156 exonContig_60 260392..260406 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6773CDS_6773Tribonema minus UTEX_B_3156 CDSContig_60 260392..260406 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6773 ID=mRNA_6773|Name=jgi.p|Trimin1|350272|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=816bp|location=Sequence derived from alignment at Contig_60:258137..260406- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGAGAGTTCAGCCGATGAGCTCAAGTACTACGGTTCCGTCCTGCC
CTCGTGCGAAATAAACTCCACCTTCTACGGGCTGCCGCGGACAGAAACAT
GCGCAAAGTGGCGCAACGCCGTGCCCGAACAGTTCAAGTTCTCCATGAAG
GTGTCAAAGAGCATCACCCACGACGCGCGGCTGAGAGGCATAGAGGACGC
CTGGCAAGCCTTCTATGCACGCGCTGCCGAGGGCCTCCAGCACAAGCTCG
GCCCCTGCCTCTTCCAGCTGCCGCCGTCGCTGACAAAGGACATGACGCGC
CTCCAAGACCTCTGCCAGCTCGTCCAGGACGTCTCGCCGCAGGCGCAGAT
CGCCATGGAGTTCCGCAGCGCGACGTGGTTCTGCGAAGACGTCTTCCAGC
TCCTGCGCGCGCGCAACTGGGCGCTCGTGGAGAACTTCTCCCCCGACGGC
TCCATCTGCACGTGCGACGAGCAGACGGCCGACTGGACGTACAGCCGCTG
GCACGGCGTCATCGACGCGCGCGGCCACGGCACCGACTTCCCCGACGACG
AGCTGCGGAGGTACGCGGAGAAGGCGGCGGCGCGGGCGAGGGCGGGCGCA
CGCGCGCAGTACGTGTTCTTTGGGAATGACTTGGATGCTACGGCGGTGCG
CAACGCTCAGACGCTGATCAGCGCCACCAAGAAGCCCTCCTCCGTCAAGC
CATCATCCGGTAGCGCCAAGAAGAAGGGCAATGGTTCTGGCAAAAAAGGC
GCGTCCAGCGCGGGCAGCGGCGCGTCACAGCCAACGATGAAGGCGTTCTT
CAACTCTGTTTCATAG
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protein sequence of jgi.p|Trimin1|350272

>Trimin1|350272|estExt_Genemark1.C_Ctg_600037 ID=Trimin1|350272|estExt_Genemark1.C_Ctg_600037|Name=jgi.p|Trimin1|350272|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=272bp
MKESSADELKYYGSVLPSCEINSTFYGLPRTETCAKWRNAVPEQFKFSMK
VSKSITHDARLRGIEDAWQAFYARAAEGLQHKLGPCLFQLPPSLTKDMTR
LQDLCQLVQDVSPQAQIAMEFRSATWFCEDVFQLLRARNWALVENFSPDG
SICTCDEQTADWTYSRWHGVIDARGHGTDFPDDELRRYAEKAAARARAGA
RAQYVFFGNDLDATAVRNAQTLISATKKPSSVKPSSGSAKKKGNGSGKKG
ASSAGSGASQPTMKAFFNSVS*
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mRNA from alignment at Contig_60:258137..260406-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6773 ID=mRNA_6773|Name=jgi.p|Trimin1|350272|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2270bp|location=Sequence derived from alignment at Contig_60:258137..260406- (Tribonema minus UTEX_B_3156 )
ATGAAGGAGAGTTCAGTGACGGTTACATTACTCTTCAACAGCAACCTGAA GTTTTGACTTGAAGTACATCCGCAGGTGTGTGTGTGTGTGCCCCGCGATG GACGCTCCGCCTATTTACATAGGCTGTGCTGGTTACAATTATGCGCATTG GCGGAAAGGCGTGTTTTACCCCAAAGGGCTTGTTCAGGCCGATGAGCTCA AGTACTACGGTTCCGTCCTGCCCTCGTGCGAAATAAACTCCACCTTCTAC GGGCTGCCGCGGACAGAAACATGCGCAAAGTGGCGCAACGCCGTGCCCGA ACAGGTAGACAAGATGATGCCTTCTAGCATGCCTTTCCACTGCAGCGTCT GCGGTGATAGCGTCTGCTCCTGCCGTTGATGCTTTTTCGATGTTCATGTG CATCCGAGTTTCCTGAGCAGTGAGACCGCCAGTGCTTCTGTTTACTCTCA AAAATTGCAGCTGACCCCATCCTTCGTGCTGTCTCATGAGTGCATGCATC ACTTTCTCCCCCAATTGTGAGCTGCTTTACTAGTGCGTGTCATATCCGAT TCTGCGAATGTGCGTGTGGGGTCAGTGGTGTGCTGCCACATCTGCCGTTG CCACGCCTGCGATCGTGTACTCATTCGTTTCCGCCCGGTTGCTGTCGTCA TTGGCAGTTCAAGTTCTCCATGAAGGTGTCAAAGAGCATCACCCACGACG CGCGGCTGAGAGGCATAGAGGACGCCTGGCAAGCCTTCTATGCACGCGCT GCCGAGGGCCTCCAGCACAAGCTCGGCCCCTGCCTCTTCCAGCTGCCGCC GTCGCTGACAAAGGACATGACGCGCCTCCAAGACCTCTGCCAGCTCGTCC AGGACGTCTCGCCGCAGGCGCAGATCGCCATGGAGTTCCGCAGCGCGACG TGGTTCTGCGAAGACGTCTTCCAGCTCCTGCGCGCGCGCAACTGGGCGCT CGTGGAGAACTTCTCCCCCGACGGCTCCATCTGCACGTGCGACGAGCAGA CGGCCGACTGGACGTACAGCCGCTGGCACGGCGTCATCGACGCGCGCGGC CACGGCACCGACTTCCCCGACGACGAGCTGCGGAGGTACGCGGAGAAGGC GGCGGCGCGGGCGAGGGCGGGCGCACGCGCGCAGTACGTGTTCTTTGGGA ATGACTTGGATGCTACGGCGGTGCGCAACGCTCAGACGCTGATCAGGTGA GCGCTGAGCACTGAGCACGTTTTGTGCCGTCTTGGGCGGCTTGTCTGCGG CACTGACGTTGCCTGATTGTGTGAAGGTCATTTTTCCTGTTGAGCGCTTG GCTGCATGTGATCTCCTGTCATGAGCTTCTTGCTATGGTGCTTGGTGAGG ACATGAGTGTCGCGTGGGTGATGCAGTGTGTAAGCATTCATTGACATTGG CGTTTCCTGCTGCACGTGCTCATGGTCTGTCGCTGCACGTGCTCATGGTC TGTCGACATCTTCTGCAGCTTGATCAAAGGCACCTTACCGTCAACTCAAG CTCAGCTTTGTGTGTTTCAGCGCCATGCGTGTGGCTTTGTATTCTCTTGT GCGCTGATGTGGCTCACAATGAAATGAATTGTCACCTAGGAAATGAAAGG TTTGCCACCATGGGATTCAATAGTCTTCTGCATCGCTTCTGTTTGCAGGA TGATATCAGAACTATTGAAAAGGGACCAGCTGGTACCAGGCTTCACCCCC GAAACACATGCGGAAACGCCTGACATCAAATCCTTCTTCCAGCCCAAACG GAAGGCGCCGACATCAGCTTCACCTGAGCCCAGCAGCAAGCGCCAAGCTT CGGCATCAGCTGGTGATTGCAGTGGCGGCGGCAAGCCACCTGCACAATCA CCAGCACCATCACCAGTCGAACTAGCAGCAGCAGCAGCAGCAGCAGCAGC GGCAGCGGCAGCACCACTCACACAACCAGCGGCAGCAGCAGTACCAACTT CACAAGCAGCAGCAGCAGCGGCAGCACCAGCTGCTCCATCAAATCGCCAC GAGAGCAGCGACACCAGCGCCACGCAGCCCGCCACGCCTGAAATGCAGAG TGGTGGTGCAGACTCTTTGCCACTGCCTCCCGCCATGGGCGCCAAGGCTG CTGTACCTGACACTGGCTCTTCTAGCGCCACCAAGAAGCCCTCCTCCGTC AAGCCATCATCCGGTAGCGCCAAGAAGAAGGGCAATGGTTCTGGCAAAAA AGGCGCGTCCAGCGCGGGCAGCGGCGCGTCACAGCCAACGATGAAGGCGT TCTTCAACTCTGTTTCATAG
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Coding sequence (CDS) from alignment at Contig_60:258137..260406-

>mRNA_6773 ID=mRNA_6773|Name=jgi.p|Trimin1|350272|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=816bp|location=Sequence derived from alignment at Contig_60:258137..260406- (Tribonema minus UTEX_B_3156 )
ATGAAGGAGAGTTCAGCCGATGAGCTCAAGTACTACGGTTCCGTCCTGCC
CTCGTGCGAAATAAACTCCACCTTCTACGGGCTGCCGCGGACAGAAACAT
GCGCAAAGTGGCGCAACGCCGTGCCCGAACAGTTCAAGTTCTCCATGAAG
GTGTCAAAGAGCATCACCCACGACGCGCGGCTGAGAGGCATAGAGGACGC
CTGGCAAGCCTTCTATGCACGCGCTGCCGAGGGCCTCCAGCACAAGCTCG
GCCCCTGCCTCTTCCAGCTGCCGCCGTCGCTGACAAAGGACATGACGCGC
CTCCAAGACCTCTGCCAGCTCGTCCAGGACGTCTCGCCGCAGGCGCAGAT
CGCCATGGAGTTCCGCAGCGCGACGTGGTTCTGCGAAGACGTCTTCCAGC
TCCTGCGCGCGCGCAACTGGGCGCTCGTGGAGAACTTCTCCCCCGACGGC
TCCATCTGCACGTGCGACGAGCAGACGGCCGACTGGACGTACAGCCGCTG
GCACGGCGTCATCGACGCGCGCGGCCACGGCACCGACTTCCCCGACGACG
AGCTGCGGAGGTACGCGGAGAAGGCGGCGGCGCGGGCGAGGGCGGGCGCA
CGCGCGCAGTACGTGTTCTTTGGGAATGACTTGGATGCTACGGCGGTGCG
CAACGCTCAGACGCTGATCAGCGCCACCAAGAAGCCCTCCTCCGTCAAGC
CATCATCCGGTAGCGCCAAGAAGAAGGGCAATGGTTCTGGCAAAAAAGGC
GCGTCCAGCGCGGGCAGCGGCGCGTCACAGCCAACGATGAAGGCGTTCTT
CAACTCTGTTTCATAG
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