mRNA_676 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|157003
Unique Name	mRNA_676
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A835Z611_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z611_9STRA)

HSP 1 Score: 1419 bits (3673), Expect = 0.000e+0
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 1

Query:    1 MVTAAKEHLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIRRGEDIPPQSVDAVFDHMDLYRHDFSGMRGATPPPKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIAWLGAQMDGQFTASRKDRLPWRNIFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDHCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRERPPVAVDGVVEE 2127
            MVTAAKEHLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIRRGEDIPPQSVDAVFDHMDLYRHDFSGMRGATPPPKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIAWLGAQMDGQFTASRKDRLPWRNIFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDHCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRERPPVAVDGVVEE
Sbjct:    1 MVTAAKEHLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIRRGEDIPPQSVDAVFDHMDLYRHDFSGMRGATPPPKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIAWLGAQMDGQFTASRKDRLPWRNIFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDHCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRERPPVAVDGVVEE 709

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BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A835Z356_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z356_9STRA)

HSP 1 Score: 790 bits (2039), Expect = 6.100e-283
Identity = 398/421 (94.54%), Postives = 408/421 (96.91%), Query Frame = 1

Query:  865 PAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDHCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRERPPVAVDGVVEE 2127
            PAKQ KSTRGKRG+LRTNRRKVLRGIPLLY+HAWLMDDD F+EKRRNP TPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPL DALIADLN EDSTCFIEAVGVDAGGRKVINS SARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKF TAKREQNLAYGGAISSYV+QGASLKIGVGTATYA+LAYSNLR L RELLSRERREFAFARQRAKDRAIAR+AREMGGADPEAAYKRHLHSG+VV A RVELQDRVKTMLDRKG GRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAA+CVVVLTDEFRTTVRCCGCGEVLKQQ+GSRIYGCPTV DEDHCSIRFIDRDDNASVNIAMCGV+MLLGLPRPIHLQRERPPVAVDGVVEE
Sbjct:    1 PAKQAKSTRGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDHCSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQRERPPVAVDGVVEE 421

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BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 1.040e-131
Identity = 277/725 (38.21%), Postives = 375/725 (51.72%), Query Frame = 1

Query:    1 MVTAAKEHLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIR-RGEDIPPQSVDAVFDHMDLYRHD---FSGMRGATPPPKKQ---PTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGPLNTA-ESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIAWLGAQM-------DGQFTASRKDRLPWRNIFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARV-----ELQDRVKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDED-----HCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRERPP 2100
            MVTAA+ H+   F  R +AH    +E  +W  RA  GF   +  A   +++ A   +D+ A+ K+ DFL R RG    P           L R +    S +R   P P +    P     +F+ K F      P   L + +R R     F ARR +IWT IN ++P+LR          + R        P+W+DE   L T  E+RE+ +L   +   R  +W+ R EPG   PP+ +T+LPV  L PAFI IDA+V++ LG ++       D      R DRL W   F  + +   E   +  +  R +R V+        RG+ +L    W++DD  + E  +    P P +V  I SDG R H TL TL A    G  +LV++GYD I  T V G   RG+F+D APL + L+  L+  D  CF+EA+GVD G +++I     RVT  T+    KGS    +  +Y++Q LA  A +FE  +RE N  Y  A+ SY    AS +   G   ++   Y  L A+A E LS +RR FAFAR RA DRA+A +AR++ G DP+AA +R        G A V     EL  +V+  L   G GRTWTRVVFFGN QFG G+AGPLPRK LL  L+ IC VVLTDE+ T+  C  CG  L Q  GSR++ C +  DED      CS+R++DRD     NIAM GV  L G  RP HL R  PP
Sbjct:    1 MVTAARRHVIDEFQGRLEAHFSWLVEIAMWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGRARVPLGPHWAAGMTSLAREEREALSHLRTPLPNPGRAIDPPQLREYRFNVKNF------PHLCLDVKARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLREAEAPAWLDEGPELLTRDEAREWRALASASWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFILIDANVLSVLGKKLRKGAGAADDALRTGRSDRLWWTKAFDLHGRGTTEQRGQAKRGRRARRAVIXXXXXXXRRGLRILRREGWVLDDSAY-EAAKGGRRPPPHLVRCITSDGERCHVTLQTLVAARPAGAAELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVTRRTEAADLKGSDRCISGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSPRRRELLAKVQERL-AGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLKKLSEICCVVLTDEYLTSKTCPCCGGRLAQVAGSRVFRCSSTTDEDSGAGGRCSVRYLDRDCAGGGNIAMIGVRRLQGRGRPAHLAR--PP 715

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BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA)

HSP 1 Score: 379 bits (973), Expect = 8.240e-117
Identity = 269/760 (35.39%), Postives = 387/760 (50.92%), Query Frame = 1

Query:   22 HLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIR-RGEDIPPQ-----------SVDAVFDHMDLYRHDFSGMRGATPPPKKQPTRAPAKFSAKRFAYHSKIPANTLPLL---SRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWI-DEDGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIA-------------------------WLGAQMDGQFTASR-----------KDRLP--------WRNIFAFYTKRVVEGPAK-----QPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDR-KGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDED---HCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQR 2088
            H+ +SF  R + H+ C+LER  W+ R  D FS  +   +  +  A ++ ED  A   +E+F++R RG +   +           ++  V D +  +R    G  G              +   +  A+   I  N   +L   + +R EDE F   ++ +WT IN DQP L    TKE  R+   +F + + PP+WI D DGPL+T +  E+G LV +  A R+ M   R  PG   PPKRFTLLP++ L P  + +D+ ++                           +G   + +    +           K RL         W  +F  + K  +  P +     +P    G++G      +    GI  L+   W ++DD  K   + P    P+ VNNI +DG++V+ TL T   +   PG   LVKKGY +I E +    HTRG+F  AA +S  L++ +N +D  CF+E VGVD G + +  +A+ARVTS +  + FK   T   ++ D++   L+ A   F+  +R  N++Y  AI+     G S++   GTA YA+  ++N +A+  E LS  RR  +F  +RAK R IARMARE+GG   EAA  R       VG    E    +  M DR  G  RTWTRV FFGNAQFGHGS GPLPRK L+  +A +  VVL DEFRT++ CCGCG  L Q + SR+Y C +   E    +CS+RFIDRD NASVNI MCG+ MLLG+ RP+HL R
Sbjct:   70 HVIKSFTLRIQDHLMCYLERLAWERRNGDHFSYVIKTGAKLLQRAGAVQEDDTAINMVEEFIVRPRGREGDQRLHEDWRGAMETALKYVRDRLSPFRVIPPGGFGRVQVDDXXXXXXXEQLD-EMGAFFKNIYRNKSLVLETEAAFRSEDEQFRLAKEGLWTSINNDQPYLPQVMTKEDARKQLPAFRD-IEPPAWIQDGDGPLSTDQKVEWGVLVRRISATRRTMVDSRRTPGTLFPPKRFTLLPMAELHPMMLPLDSRIVTSIVALALDNIQPSLDIPTKKHYVETGMGTSQEWKILQQKQLRSRIVRREWKARLEGGMMDSGWWLCMFNLHEKVRLRMPRRAEVNWKPAKPLGRKG------KTAWGGIRCLWGTGWTIEDDLSKHGNKKP----PWFVNNITTDGLQVNVTLATKVVDPVIPGVADLVKKGYTSIKEVYDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSNSSAEDFKNIETASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAEL--SGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRK------VGPESEERAALLSRMRDRLAGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSMTCCGCGMNLVQVDSSRVYQCASCTPESVNQNCSVRFIDRDVNASVNIGMCGIRMLLGMSRPLHLCR 809

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BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA)

HSP 1 Score: 363 bits (933), Expect = 2.210e-111
Identity = 260/730 (35.62%), Postives = 374/730 (51.23%), Query Frame = 1

Query:   22 HLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIR-RGED----IPPQSVDAVFDHMDLYRHDFSGMRGATPP----------PKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDE--DGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISID----ADVIAWLGAQMDGQFTASRKDRLPWRN--------------IFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDR-KGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDH---CSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQR 2088
            H+ +SF  R + H+ C+LER  WD R  D F+  +   +  +  A ++ +D+ A   IEDFL R RG D    +      A+   +   R+     R A P             +   R     +  +  Y  K     L + + +R E+E +   ++ +WT IN DQP L    TK + ++   +F   + PP W+ E  DG L   +  ++  L  +   +R  +   R  PG   PPKRFTLLPV+ L P  + +D      VI     ++  Q  +SR+ R  W+               +F  + K  +  P    +        L    +    G+  L+   W   +D  +   + P    P+ VNNI +DG++V+ TL T   E   PG  +L++KGY +I + + A  HTRG+F  AA +SD LI+ LN +D  CFIEAVGVD+G + +  +A+AR++S T  + FK       ++ D+K   LA A   FE  +R  N AY  AIS   E   S++   GTA Y D  +S+   LA E LS +RR  +F  +RAK R I+RMA ++ G   EA+  R       +G    E +  + +M D   G+ RTWTRVVFFGNA FGHGS GPLPRK L+  +A +  VVL DEFRT+  CCGCG+ L Q NGSR++ C +   E     CS+RFIDRD NASVNIA+CG++MLLG+ RP HL R
Sbjct:   53 HVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDK--PRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRT-IEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSE--VSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRK------IGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 767

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BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA)

HSP 1 Score: 361 bits (927), Expect = 1.900e-110
Identity = 256/734 (34.88%), Postives = 372/734 (50.68%), Query Frame = 1

Query:   22 HLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIR-RGEDIPPQSVD----AVFDHMDLYRHDFSGMRGATPP----------PKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDE--DGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADV----------IAWLGAQMDG------------QFTASRKDRLPWRNIFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDR-KGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDH---CSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQR 2088
            H+ +SF  R + H+ C+LER  W  R  + F+  +   +  +  AA++ +D+ A   +E FL+R RG D   Q  +    A+   +   R+     R A P             +   R     +  +  Y  K     L   + +R EDE +   ++ +WT IN DQP L    TK + ++   +F   + PP+W+ E  DG L   +  ++  L  +   +R  +   R  PG   PPKRFTLLPV+ L P  + +D  +            W   Q +G            + T    +R  W  +   + K  V  P    +S   +   L    +    GI  L+   W ++ D  +   + P    P+ VNNI +DG++V+ TL T       PG  +L++KGY +I + + A  HTRG+F  A  +SD +I+ LN++D  CFIEAVGVD+G + +  +A+ARV+S T  + FK       ++ D+K   L+ A  KFE  +R  N  Y  AIS       S++   G A Y ++ +S+   +A E LS ERR  +F  +RAK R I+RMA ++ G   EAA  R       +G    E +  +  M D   G+ RTWTRVVFFGNAQFGHGS GPLPRK L+  +A +  VVL DEFRT+  CCGCG+ L Q NGSR++ C +   E     CS+RFIDRD NASVNIA+CG++MLLG  RP HL R
Sbjct:   54 HVVKSFTSRIQDHLMCYLERLAWSRRRDEHFAYVIKTGAKLLQRAAAVQDDAAAAAMVEAFLVRPRGSDGQQQLHEDWWAAMGSGLTYIRNRLQPFRVAPPEGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDK--PRVLHTEAAFRSEDEQYRVAKELLWTSINNDQPYLAKVMTKAEAQKQLPAFRT-IEPPAWVMENGDGDLTQEQKVQWCGLQRRVSDIRTALLEARRTPGTMFPPKRFTLLPVAELQPMMLPLDDRIDFLSDARGTRAEWRALQQEGIRSRQVRKDWKARLTGDMTERGWWLCMLNLHDKVGVRVPRGAERSGEARMKPLGRKGKLAWGGIRCLWGQKWTIEGDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVTAVIPGVAELIEKGYASIKDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARVSSDTSPEDFKKIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQL--SSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRK------IGPEPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPPHLCR 772

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BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: D8LP59_ECTSI (N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP59_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 6.900e-105
Identity = 247/709 (34.84%), Postives = 365/709 (51.48%), Query Frame = 1

Query:   58 HIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLI-RRGED---IPPQSVDAVFDHMDLYRHDFSGMRGATPPPKKQPTRAPAK---FSAKRFAYHSKIPAN-TLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIAWLGAQMD--------------GQFTASRKDRLPWRNIFAFYTKRVVEG-PAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGA--PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTS--TTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDR---VKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDH-CSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRE 2091
            H+ C LER +W+ R  + F T +  A+  IY AA       A   I  F+  +RG +   + P+  +A+   +  YR  F  +R   PPPK  P     +      + F Y+ K   N  L + +  R+ D     RR +IW+ IN  Q +++S+KTKE   +  R   + +P P W DE   ++    ++  +LV   +  R+ MW    EPG E+PPK F+L+P   L+ AF+  D+  I  L   +D              G   + + +RL W  IF F+++R+V   P+ +   T+  R VLR N R   +GI +     W  D+  +  KR +PS   P++VN+I +DG++V   L TL        G  +LVKKGY +I +     + ++G+FK+A PL     + L+  D+   IE VG+D G   V  +  A +TS  T +   FKGS    +S +YKHQ L   + K E  +R  ++ YG A+ ++     SLK    +  Y+ + Y  LR    ELLS ERR   FAR RA+ R +  MAR++   +    YK+ +   +   A  +  + R   +K + D+K       RVVFFGN QFGHG+ G  PRK L+  L  +C VVL DEFRT+  CC CG  LKQ +GSR++ C + +DE   CS++FIDRD N S NI +CGV  LLGL RP  L R+
Sbjct:    3 HLSCRLERRLWECRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSEKELLRPEWGEAMEHLLSEYRGLFEPLRVKRPPPKDPPEHPKTEEELTGREDFLYNVKARLNDVLRIEAGCRKVDFHLRKRRGEIWSEINERQQSIKSSKTKEGFLKQ-RHLLQEIPVPPWFDEGIKMS---KKDASNLVRDVRNTRKDMWKSMREPGTEDPPKAFSLMPHFSLTRAFVRYDSQSIGTLAKSLDFPGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPSTEKNQTQRTRKVLRLNNR-YRKGIGVCNKDPWFTDEVLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDN--HIEVVGLDPGQVSVYATVRANITSPKTFEASEFKGSQSSISSREYKHQSLTRFSAKAEVGRRLDHVEYGQAVQAF--DSVSLKQPGSSVAYSSVIYCTLRVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNT---YKQEVRKEQRSSAEPLSPERRKELLKKIRDKK-------RVVFFGNGQFGHGARGACPRKALIRALGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGQSCSVKFIDRDTNGSANIGVCGVFQLLGLKRPSFLCRK 692

[Close]

BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA)

HSP 1 Score: 336 bits (862), Expect = 3.430e-99
Identity = 249/716 (34.78%), Postives = 344/716 (48.04%), Query Frame = 1

Query:    1 MVTAAKEHLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIR-RGEDIPPQSVDAVFDHMDLYRHDF---SGMRGATPPPKKQ---PTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGPLNTA-ESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIAWLGAQM-------DGQFTASRKDRLPWRNIFAFYTKRVVEGPAKQ------------------PKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAY----KRHLHSGKV-VGAARVELQDRVKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDHCSIRFIDRDDNASVNIA 2034
            +V AA+ H+   F  R +AH+   +E   W  RA  GF   +  A   +++ A   +D+ A+ K+ DFL R RG    P           L R +    S +R   P P ++   P     +F+ K F      P   L +++R R     F ARR +IWT IN ++P+LR          + R        P+W+DE   L T  E RE+ +L   A   R  +W+ R EPG   PP+ +T+LPV  L PAF+ IDA+V++ LG ++       DG     R DRL W   F  + +   E PA+                    +  R +R V++T R+    G+ +L    W++DD  + E  +    P P +V  I SDG R H TL TL A    G  +LV++GYD I  T V G   RG+F+D APL + L+  L+  D  CF+EA+G                         KGS    +  +Y++Q LA  A +FE  +RE N  Y  A+ +Y    AS +   G   ++   Y  L A+A E LS +RR FAFAR RA DRA+A +AR++ G DP+AA     +R    GK  V   R EL   V+  L   G GRTWTR+VFFGN QFG G+AG LPRK LL  LA IC VVLTDE+ T+          K    S   G         CS+R++DRD     NIA
Sbjct:  174 IVEAARRHVIDEFQGRLEAHLSWLVEIATWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGRARLPLGPHWAAGMASLAREEREARSHLRTPLPNPGRERDAPQLREYRFNIKNF------PHLCLDVMARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLRGAEAPAWLDEGPELLTRDEVREWRALASAAWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFVLIDAEVLSVLGTKLRKAAGAADGALRTRRSDRLWWTKAFDLHGRGTREIPAEARRRGKRYVREYAEQRGQAKRGRRARRAVIKTGRKVRRSGLRILRREGWVLDDAAY-EAAKGGRRPPPHLVRCITSDGERCHVTLQTLVAARPAGAPELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDRACFVEAIGA---------------------ADLKGSDRCISGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSPRRRELLANVRERL-AGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLKTLAEICCVVLTDEYLTS----------KTYEDSGAGG--------RCSVRYLDRDCAGGGNIA 842

[Close]

BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A835ZIE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIE4_9STRA)

HSP 1 Score: 300 bits (769), Expect = 6.640e-88
Identity = 206/619 (33.28%), Postives = 317/619 (51.21%), Query Frame = 1

Query:   49 AKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDE-DSHADEKIEDFLIR-RGEDIPPQSVDAV----------FDHMDLYRHDFSGMRGATPPPKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGP---LNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIAWLGAQMDGQ------FTASRKDRLPWRNIFAFYTKRVV-----------------EGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDRKGEGRTWTRVVFFGN 1791
            +K H+   LE  +W  R  + F   L+ A++ ++ AA +++ ++ +  KI DFL R RG +  P   D V           D +D +     G      PP+   +     + A+     +  P   + ++  +R ED  +  RR +IW GIN  QP LR+A   + VR    SF   +  PSWIDE  P   L  A++ +Y  L  +A  +R Q+W D  EPG  NPP  FTLLPV  L P F+ I   V++ +  ++  +      F+ + K R+ W+ +F F++   +                 + P +  K  R KR VL+T +R+   GI  L+  AW++DD+ ++ ++  P+   P +V +I +DGV  + TLVTL A GAPG   L K GYD+I       EH RG+FKD  PLS  L+  L+ ED++CF+EAVG D GG+ +      RVTS +  +  +G+    TS +Y++  LA  A +FE  +R  N  YG A+ +Y +  ASLK+           Y+N+  +A E LS ERR F FA+ RA+DRA+A +AR++ G DP+AA  R L+  K     + E+  + K +L R  +  +  + V   N
Sbjct:  127 SKQHVVRILEEAMWSHRHDENFDKHLSAAAHCVFQAAVMNDIEAASANKIGDFLYRERGTERVPLHEDWVGAVISAAHDLSDVLDCFLMPIRGDPDYVVPPRSDGS---PNYLAEYNWNSANFPTLCISIIESFRREDSGYRRRRGEIWEGINDAQPFLRAALDIKAVRAQRESFR-MVAAPSWIDEGDPADELTEAQANDYSKLRKQAGDVRGQLWRDLQEPGTRNPPASFTLLPVYDLKPVFVQISHKVVSQIAGKLAKKRGVRRPFSVTAKTRVWWKPVFDFHSGNAIVSASCERRRSERRHCRRQRPGQPRKRARAKRAVLKTKKRRRRFGIRQLWREAWVLDDEEYERRKGGPA---PQLVRSITTDGVHCNVTLVTLDA-GAPGVAGLAKAGYDHIAPMADVTEHWRGVFKDIKPLSQELMDVLDEEDASCFVEAVGADPGGKVMCTHTRTRVTSHSVPEDLRGTDRMFTSSEYRYASLAKRAQRFEDERRRDNPGYGAAVGAYSQHNASLKV----------LYANISVVAAEKLSDERRHFRFAQFRARDRALAAVARDLAGGDPDAALARVLNPEKRAKMKKKEISQQRKELLARASDLNSSPQTVVMAN 727

[Close]

BLAST of jgi.p|Trimin1|157003 vs. uniprot
Match: A0A836CFJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ9_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.110e-65
Identity = 199/658 (30.24%), Postives = 299/658 (45.44%), Query Frame = 1

Query:   22 HLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIR-RGEDIPPQSVD----AVFDHMDLYRHDFSGMRGATPP----------PKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDE--DGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDADVIA--------------------------------WLGAQMDG------------QFTASRKDRLPWRNIFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDR-KGEGRTWTRVVFFGNAQFG 1803
            H+ +SF  R + H+ C++ER  W     + F+  +   +  +  A ++ +D+ A   +E FL+R RG D   Q  +    A+   +   R+     R A P             +   R     +  +  Y  K     L   + +R EDE +   ++ +WT IN+DQP L    TK + ++   +F   + PP+W+ E  DG L   +  ++  L  +   +R  +   R  PG   PPKRFTLLPV  L P  + +D  ++                                 W   Q +G            + T    +R  W  +   + K  V  P    +S   +   L    +    GI  L+   W +++D  +   R P    P+ VNNI +DG++V+ TL T   E   PG  +L++KGY +I + + A  HTRG+F  AA +SD LI+ LN +D  CFIEA GVDAG   +  +A+AR++S T  + FK       ++ D+K   L+ A  KFE  +R  N  Y  AIS     G S++   G A Y +  +S+   +A E LS ERR  +F   RAK R I+RMA ++ G   EAA  R        G    E +  +  M D   G+ RTWTRVVFFGNAQFG
Sbjct:  169 HVVKSFTSRIQDHLMCYMERLAWSRHCDEHFAYVIKTGAKLLQRAGAVQDDATAAAMVEAFLVRPRGSDGQQQLHEDWRAAMGSGLTYIRNRLQPFRVAPPEGFRGGQVEDGADEDEDRVDEMGTFFKNIYRDK--PRVLHTEAAFRSEDEQYRVAKELLWTSINSDQPYLAKVMTKAEAQKQLPAFRT-IEPPAWVMENGDGDLTEEQKVQWCGLQRRISDIRTALLDARRTPGTMFPPKRFTLLPVVELHPMMLPLDDRIVTSIVGLALDKIQPVVHVPKLKDFLSAERGTRAEWRALQQEGVHSCQVRKDWKTRLTGDMTERGWWLCMLNLHDKVRVRVPRGAERSGEARMKPLGRKLKLAWGGIRCLWGQQWTIEEDLSEHADRGP----PWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYKADTHTRGLFGSAAKISDQLISALNAKDRRCFIEATGVDAGQILLYTAAAARISSDTSPEDFKKIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQL--SGVSMRTPGGAAAYTNTLHSHFITMAEEKLSWERRRKSFDANRAKMRDISRMAVQIAGRSAEAAALRKF------GPEPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFG 811

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|157003 vs. uniprot

BLAST of jgi.p|Trimin1|157003 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
A0A835Z611_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z356_9STRA	6.100e-283	94.54	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCX3_9STRA	1.040e-131	38.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z394_9STRA	8.240e-117	35.39	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YYX5_9STRA	2.210e-111	35.62	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YYB9_9STRA	1.900e-110	34.88	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
D8LP59_ECTSI	6.900e-105	34.84	N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepI...	[more]
A0A835ZC24_9STRA	3.430e-99	34.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZIE4_9STRA	6.640e-88	33.28	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CFJ9_9STRA	1.110e-65	30.24	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_2	contig	Contig_2:1114669..1116798 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|157003\|e_gw1.2.364.1
Hectar predicted targeting category	other localisation
TranscriptId	157325
Track	FilteredModels1
ProteinId	157003

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157003	gene_676	Tribonema minus UTEX_B_3156	gene	Contig_2 1114669..1116798 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_676_1	exon_676_1	Tribonema minus UTEX_B_3156	exon	Contig_2 1114669..1116798 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_676	CDS_676	Tribonema minus UTEX_B_3156	CDS	Contig_2 1114669..1116798 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157003	Trimin1\|157003\|e_gw1.2.364.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_2 1114669..1116798 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_2:1114669..1116798-
coding sequence from alignment at Contig_2:1114669..1116798-

spliced messenger RNA

>mRNA_676 ID=mRNA_676|Name=jgi.p|Trimin1|157003|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2130bp|location=Sequence derived from alignment at Contig_2:1114669..1116798- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGACAGCGGCAAAAGAACACCTCAAACGCTCATTCCCTGAGCGCGC
AAAGGCTCACATACGGTGCCATTTGGAGCGCTGTATCTGGGATTTGAGAG
CGATGGACGGCTTCTCCACATTCCTCACATACGCATCCAACGCCATCTAC
GTTGCAGCGTCGCTGGATGAGGACAGCCATGCAGACGAGAAGATTGAGGA
CTTTCTCATTCGTCGCGGAGAGGACATACCCCCCCAGTCTGTGGACGCCG
TCTTCGATCACATGGACTTGTACAGGCACGACTTCAGCGGTATGCGCGGA
GCCACTCCACCTCCTAAGAAACAGCCGACACGCGCGCCGGCCAAATTTTC
GGCCAAGCGCTTCGCCTACCACTCCAAGATTCCGGCCAACACACTTCCCC
TGCTTAGCAGATACCGAGAAGAGGATGAGGCGTTCATCGCACGACGACAG
GATATATGGACGGGCATCAATACTGATCAGCCCGCCCTGCGATCCGCAAA
GACCAAGGAGAAGGTGCGGGAGTCCGCGCGGTCGTTCACCGAGCATCTGC
CACCGCCTTCGTGGATCGACGAAGACGGGCCCCTCAACACGGCCGAGTCA
CGCGAATATGGATCTCTCGTTTGGAAGGCTCAGGCTCTGCGGCAACAGAT
GTGGGTGGATCGGTGCGAGCCTGGCTGCGAGAATCCTCCAAAGCGGTTTA
CATTGCTTCCGGTCTCGCCCCTTTCCCCAGCCTTCATCTCCATCGACGCC
GACGTGATCGCTTGGCTGGGCGCCCAGATGGACGGCCAGTTCACGGCGAG
CAGGAAGGACAGGCTGCCGTGGCGCAACATCTTTGCCTTCTACACCAAAC
GAGTGGTGGAGGGTCCCGCGAAGCAACCCAAATCAACTCGCGGAAAGAGA
GGGGTGCTACGGACCAATCGCAGGAAGGTGTTGCGTGGCATTCCGCTGCT
CTACGATCACGCGTGGCTCATGGACGACGATCACTTCAAAGAGAAGCGAC
GCAATCCTTCTACGCCCGTCCCTTTTGTTGTCAACAACATCAAAAGCGAT
GGTGTACGGGTGCACACGACCCTGGTCACTCTCGGAGCTGAAGGAGCGCC
TGGACGAGACCAGCTCGTCAAGAAGGGATACGACAACATCACAGAGACCT
TCGTCGCAGGCGAGCACACACGTGGCATCTTCAAGGATGCTGCGCCTCTC
AGTGATGCGCTCATCGCGGACCTCAATCGTGAGGACTCAACATGCTTCAT
CGAGGCGGTCGGAGTTGACGCAGGAGGTCGCAAAGTGATCAACTCAGCTT
CGGCGCGAGTGACATCCACGACAGATCATCAGAGCTTCAAGGGGAGTACC
GTGCATACAACGTCAGGCGACTACAAGCACCAGTGTCTGGCAACAGCAGC
GCTGAAGTTTGAGACTGCCAAGCGGGAGCAGAACCTGGCATACGGCGGGG
CCATCAGCAGCTACGTCGAGCAGGGTGCCAGTCTCAAGATCGGCGTCGGC
ACCGCCACATACGCCGACCTTGCGTACAGCAACCTGCGCGCGTTGGCTAG
AGAGCTGCTTTCACGCGAAAGGAGGGAGTTTGCGTTCGCGAGACAGCGTG
CGAAGGACAGGGCGATTGCCAGAATGGCGAGGGAGATGGGAGGCGCCGAT
CCGGAGGCGGCGTACAAGAGGCACCTTCACAGTGGCAAGGTTGTGGGGGC
GGCGCGGGTGGAGCTGCAAGACAGAGTAAAGACGATGTTAGATCGCAAGG
GGGAGGGGAGAACTTGGACTAGAGTAGTGTTTTTCGGGAATGCGCAGTTC
GGCCACGGCAGTGCCGGCCCGCTTCCCCGGAAGCGCCTTCTCTGGGTTCT
TGCAGCAATTTGTGTGGTAGTGTTGACCGATGAGTTCAGAACTACGGTCA
GATGCTGCGGCTGTGGGGAGGTATTGAAACAGCAGAACGGGTCTCGGATC
TACGGTTGCCCTACCGTGTTAGACGAGGACCACTGCTCGATCAGATTCAT
CGACCGCGACGACAACGCTTCCGTGAACATCGCCATGTGCGGTGTGCACA
TGCTGCTGGGGCTACCGCGCCCTATCCACTTGCAGCGCGAGAGGCCTCCC
GTTGCAGTCGATGGTGTGGTTGAGGAGTGA

protein sequence of jgi.p|Trimin1|157003

>Trimin1|157003|e_gw1.2.364.1 ID=Trimin1|157003|e_gw1.2.364.1|Name=jgi.p|Trimin1|157003|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=710bp
MVTAAKEHLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIY
VAASLDEDSHADEKIEDFLIRRGEDIPPQSVDAVFDHMDLYRHDFSGMRG
ATPPPKKQPTRAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQ
DIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDEDGPLNTAES
REYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISIDA
DVIAWLGAQMDGQFTASRKDRLPWRNIFAFYTKRVVEGPAKQPKSTRGKR
GVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSD
GVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPL
SDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGST
VHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVG
TATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGAD
PEAAYKRHLHSGKVVGAARVELQDRVKTMLDRKGEGRTWTRVVFFGNAQF
GHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRI
YGCPTVLDEDHCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRERPP
VAVDGVVEE*

mRNA from alignment at Contig_2:1114669..1116798-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_676 ID=mRNA_676|Name=jgi.p|Trimin1|157003|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2130bp|location=Sequence derived from alignment at Contig_2:1114669..1116798- (Tribonema minus UTEX_B_3156 )
ATGGTGACAGCGGCAAAAGAACACCTCAAACGCTCATTCCCTGAGCGCGC
AAAGGCTCACATACGGTGCCATTTGGAGCGCTGTATCTGGGATTTGAGAG
CGATGGACGGCTTCTCCACATTCCTCACATACGCATCCAACGCCATCTAC
GTTGCAGCGTCGCTGGATGAGGACAGCCATGCAGACGAGAAGATTGAGGA
CTTTCTCATTCGTCGCGGAGAGGACATACCCCCCCAGTCTGTGGACGCCG
TCTTCGATCACATGGACTTGTACAGGCACGACTTCAGCGGTATGCGCGGA
GCCACTCCACCTCCTAAGAAACAGCCGACACGCGCGCCGGCCAAATTTTC
GGCCAAGCGCTTCGCCTACCACTCCAAGATTCCGGCCAACACACTTCCCC
TGCTTAGCAGATACCGAGAAGAGGATGAGGCGTTCATCGCACGACGACAG
GATATATGGACGGGCATCAATACTGATCAGCCCGCCCTGCGATCCGCAAA
GACCAAGGAGAAGGTGCGGGAGTCCGCGCGGTCGTTCACCGAGCATCTGC
CACCGCCTTCGTGGATCGACGAAGACGGGCCCCTCAACACGGCCGAGTCA
CGCGAATATGGATCTCTCGTTTGGAAGGCTCAGGCTCTGCGGCAACAGAT
GTGGGTGGATCGGTGCGAGCCTGGCTGCGAGAATCCTCCAAAGCGGTTTA
CATTGCTTCCGGTCTCGCCCCTTTCCCCAGCCTTCATCTCCATCGACGCC
GACGTGATCGCTTGGCTGGGCGCCCAGATGGACGGCCAGTTCACGGCGAG
CAGGAAGGACAGGCTGCCGTGGCGCAACATCTTTGCCTTCTACACCAAAC
GAGTGGTGGAGGGTCCCGCGAAGCAACCCAAATCAACTCGCGGAAAGAGA
GGGGTGCTACGGACCAATCGCAGGAAGGTGTTGCGTGGCATTCCGCTGCT
CTACGATCACGCGTGGCTCATGGACGACGATCACTTCAAAGAGAAGCGAC
GCAATCCTTCTACGCCCGTCCCTTTTGTTGTCAACAACATCAAAAGCGAT
GGTGTACGGGTGCACACGACCCTGGTCACTCTCGGAGCTGAAGGAGCGCC
TGGACGAGACCAGCTCGTCAAGAAGGGATACGACAACATCACAGAGACCT
TCGTCGCAGGCGAGCACACACGTGGCATCTTCAAGGATGCTGCGCCTCTC
AGTGATGCGCTCATCGCGGACCTCAATCGTGAGGACTCAACATGCTTCAT
CGAGGCGGTCGGAGTTGACGCAGGAGGTCGCAAAGTGATCAACTCAGCTT
CGGCGCGAGTGACATCCACGACAGATCATCAGAGCTTCAAGGGGAGTACC
GTGCATACAACGTCAGGCGACTACAAGCACCAGTGTCTGGCAACAGCAGC
GCTGAAGTTTGAGACTGCCAAGCGGGAGCAGAACCTGGCATACGGCGGGG
CCATCAGCAGCTACGTCGAGCAGGGTGCCAGTCTCAAGATCGGCGTCGGC
ACCGCCACATACGCCGACCTTGCGTACAGCAACCTGCGCGCGTTGGCTAG
AGAGCTGCTTTCACGCGAAAGGAGGGAGTTTGCGTTCGCGAGACAGCGTG
CGAAGGACAGGGCGATTGCCAGAATGGCGAGGGAGATGGGAGGCGCCGAT
CCGGAGGCGGCGTACAAGAGGCACCTTCACAGTGGCAAGGTTGTGGGGGC
GGCGCGGGTGGAGCTGCAAGACAGAGTAAAGACGATGTTAGATCGCAAGG
GGGAGGGGAGAACTTGGACTAGAGTAGTGTTTTTCGGGAATGCGCAGTTC
GGCCACGGCAGTGCCGGCCCGCTTCCCCGGAAGCGCCTTCTCTGGGTTCT
TGCAGCAATTTGTGTGGTAGTGTTGACCGATGAGTTCAGAACTACGGTCA
GATGCTGCGGCTGTGGGGAGGTATTGAAACAGCAGAACGGGTCTCGGATC
TACGGTTGCCCTACCGTGTTAGACGAGGACCACTGCTCGATCAGATTCAT
CGACCGCGACGACAACGCTTCCGTGAACATCGCCATGTGCGGTGTGCACA
TGCTGCTGGGGCTACCGCGCCCTATCCACTTGCAGCGCGAGAGGCCTCCC
GTTGCAGTCGATGGTGTGGTTGAGGAGTGA

Coding sequence (CDS) from alignment at Contig_2:1114669..1116798-

>mRNA_676 ID=mRNA_676|Name=jgi.p|Trimin1|157003|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2130bp|location=Sequence derived from alignment at Contig_2:1114669..1116798- (Tribonema minus UTEX_B_3156 )
ATGGTGACAGCGGCAAAAGAACACCTCAAACGCTCATTCCCTGAGCGCGC
AAAGGCTCACATACGGTGCCATTTGGAGCGCTGTATCTGGGATTTGAGAG
CGATGGACGGCTTCTCCACATTCCTCACATACGCATCCAACGCCATCTAC
GTTGCAGCGTCGCTGGATGAGGACAGCCATGCAGACGAGAAGATTGAGGA
CTTTCTCATTCGTCGCGGAGAGGACATACCCCCCCAGTCTGTGGACGCCG
TCTTCGATCACATGGACTTGTACAGGCACGACTTCAGCGGTATGCGCGGA
GCCACTCCACCTCCTAAGAAACAGCCGACACGCGCGCCGGCCAAATTTTC
GGCCAAGCGCTTCGCCTACCACTCCAAGATTCCGGCCAACACACTTCCCC
TGCTTAGCAGATACCGAGAAGAGGATGAGGCGTTCATCGCACGACGACAG
GATATATGGACGGGCATCAATACTGATCAGCCCGCCCTGCGATCCGCAAA
GACCAAGGAGAAGGTGCGGGAGTCCGCGCGGTCGTTCACCGAGCATCTGC
CACCGCCTTCGTGGATCGACGAAGACGGGCCCCTCAACACGGCCGAGTCA
CGCGAATATGGATCTCTCGTTTGGAAGGCTCAGGCTCTGCGGCAACAGAT
GTGGGTGGATCGGTGCGAGCCTGGCTGCGAGAATCCTCCAAAGCGGTTTA
CATTGCTTCCGGTCTCGCCCCTTTCCCCAGCCTTCATCTCCATCGACGCC
GACGTGATCGCTTGGCTGGGCGCCCAGATGGACGGCCAGTTCACGGCGAG
CAGGAAGGACAGGCTGCCGTGGCGCAACATCTTTGCCTTCTACACCAAAC
GAGTGGTGGAGGGTCCCGCGAAGCAACCCAAATCAACTCGCGGAAAGAGA
GGGGTGCTACGGACCAATCGCAGGAAGGTGTTGCGTGGCATTCCGCTGCT
CTACGATCACGCGTGGCTCATGGACGACGATCACTTCAAAGAGAAGCGAC
GCAATCCTTCTACGCCCGTCCCTTTTGTTGTCAACAACATCAAAAGCGAT
GGTGTACGGGTGCACACGACCCTGGTCACTCTCGGAGCTGAAGGAGCGCC
TGGACGAGACCAGCTCGTCAAGAAGGGATACGACAACATCACAGAGACCT
TCGTCGCAGGCGAGCACACACGTGGCATCTTCAAGGATGCTGCGCCTCTC
AGTGATGCGCTCATCGCGGACCTCAATCGTGAGGACTCAACATGCTTCAT
CGAGGCGGTCGGAGTTGACGCAGGAGGTCGCAAAGTGATCAACTCAGCTT
CGGCGCGAGTGACATCCACGACAGATCATCAGAGCTTCAAGGGGAGTACC
GTGCATACAACGTCAGGCGACTACAAGCACCAGTGTCTGGCAACAGCAGC
GCTGAAGTTTGAGACTGCCAAGCGGGAGCAGAACCTGGCATACGGCGGGG
CCATCAGCAGCTACGTCGAGCAGGGTGCCAGTCTCAAGATCGGCGTCGGC
ACCGCCACATACGCCGACCTTGCGTACAGCAACCTGCGCGCGTTGGCTAG
AGAGCTGCTTTCACGCGAAAGGAGGGAGTTTGCGTTCGCGAGACAGCGTG
CGAAGGACAGGGCGATTGCCAGAATGGCGAGGGAGATGGGAGGCGCCGAT
CCGGAGGCGGCGTACAAGAGGCACCTTCACAGTGGCAAGGTTGTGGGGGC
GGCGCGGGTGGAGCTGCAAGACAGAGTAAAGACGATGTTAGATCGCAAGG
GGGAGGGGAGAACTTGGACTAGAGTAGTGTTTTTCGGGAATGCGCAGTTC
GGCCACGGCAGTGCCGGCCCGCTTCCCCGGAAGCGCCTTCTCTGGGTTCT
TGCAGCAATTTGTGTGGTAGTGTTGACCGATGAGTTCAGAACTACGGTCA
GATGCTGCGGCTGTGGGGAGGTATTGAAACAGCAGAACGGGTCTCGGATC
TACGGTTGCCCTACCGTGTTAGACGAGGACCACTGCTCGATCAGATTCAT
CGACCGCGACGACAACGCTTCCGTGAACATCGCCATGTGCGGTGTGCACA
TGCTGCTGGGGCTACCGCGCCCTATCCACTTGCAGCGCGAGAGGCCTCCC
GTTGCAGTCGATGGTGTGGTTGAGGAGTGA