mRNA_6575 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169287
Unique NamemRNA_6575
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A835YN69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN69_9STRA)

HSP 1 Score: 798 bits (2060), Expect = 1.880e-292
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 1 
Query:    1 MGSNCSRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVRRTEHHYSGKCKKRPSIGCLLAPY 1131
            MGSNCSRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVRRTEHHYSGKCKKRPSIGCLLAPY
Sbjct:    1 MGSNCSRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVRRTEHHYSGKCKKRPSIGCLLAPY 377
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A835ZA21_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA21_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 6.560e-141
Identity = 191/351 (54.42%), Postives = 246/351 (70.09%), Query Frame = 1 
Query:   16 SRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVRRT 1068
            S+  L  H EW  LNT GD PCARSG  AVVV   +Y+FGGCDG  V ND+  F   T EW  I  + GP+ R +FG+C GPG +D T+ACG +     A +DIWSFN R RTWTK F+SP+ALYGVS+CW    LLMY G+TG+ Y + LYAF   T +V K+ T+G  PS RYK E F++D+++Y+ GGG FAP  G M + +LNL SL W  ++ +ND S PR AFSCC+D ET K W+FGGF   N RLQAFQ +D+Q   W +V ++CSPP RAFHSM+  +GSL L+LG++G + F+DVW++ IRSTPPSLQMLAA AF++L  +A  PA+P E++ LIE+VR T
Sbjct:    3 SKSLLNRHREWVLLNTFGDPPCARSGHAAVVVRGKIYVFGGCDGVVVYNDLHWFDTATHEWSAIHSEGGPTPRAAFGMCAGPGEDDFTIACGSDTQYMSAFSDIWSFNTRRRTWTKLFESPKALYGVSICWYGRMLLMYAGTTGLEYCNHLYAFDSLTSSVVKVSTTGVCPSRRYKHESFILDDDMYVFGGGCFAPTEGCMFISRLNLRSLEWKQVQVQNDTSIPRTAFSCCMDPETLKVWVFGGFDADNTRLQAFQCYDMQLRKWENVASVCSPPSRAFHSMIYSQGSLFLMLGANGKRKFNDVWQYRIRSTPPSLQMLAAHAFLRLPHSACRPAIPDEMQSLIESVRLT 353
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A835Z6H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H5_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 1.200e-137
Identity = 190/349 (54.44%), Postives = 237/349 (67.91%), Query Frame = 1 
Query:   16 SRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVR 1062
            SR     H EW  LNT GD PCARSG  AVVV   +Y+FGGCDG AV ND+  F   T EW  I  + GP+ R +FG+C GPG ED T+ACG N     A ADIW FN R R WTK F+SP+ALYGVS+CW    LLMY G+TG  YS+ LYAF  +T  VAK+ T+G  PS RYK E FVV++++Y+ GGG FAP  G M + +L+L SL W  ++ E D S  R A SCCVD ET K W+FGGF   N RLQAFQ +D+  N WN VQT+CSP  RAFHSM+  +GSL L+LG++G + F+D+W++ IRSTPP+LQMLAA A ++L   A  P++P E+  LIE V+
Sbjct:    3 SRYLWNQHQEWLHLNTFGDRPCARSGHSAVVVGGKIYVFGGCDGVAVYNDLHRFDTVTHEWSVIHAEGGPTPRAAFGMCAGPGEEDFTIACGSNTQHMSAFADIWRFNTRRRAWTKMFESPKALYGVSICWYGRMLLMYAGTTGSKYSNHLYAFDARTSGVAKVSTTGVCPSRRYKHESFVVNDDMYVFGGGCFAPTEGCMFISRLDLRSLEWKQVDVEGDTSVARTAVSCCVDPETLKVWVFGGFDADNTRLQAFQNYDLTSNEWNVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDIWQYRIRSTPPTLQMLAAHALLRLPRLACQPSLPDEIHSLIEAVK 351
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A835Z2J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J9_9STRA)

HSP 1 Score: 402 bits (1033), Expect = 2.040e-135
Identity = 188/354 (53.11%), Postives = 248/354 (70.06%), Query Frame = 1 
Query:   10 NCSR-CELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVRRT 1068
            NC R C +E  ++   + T  D PCARSGQ AV+V D +Y+FGGCDG  V ND+  F   T EW+ +  + GP+ R +FG+C+GPG ED T+ACG N     A +D+WSFN RHRTWTK F+SP+ALYGVS+CW    LLMY G+TG+ Y + LYAF+    +V K+ T+G  PS RYK E F++++N+Y+ GGG FAP  G M + +LNL SL W  L  + D S  R AFSCC D ET K W+FGGF   N RLQAFQ++D+Q   W +V ++CSPP RAFHSM+  +GSL L+LG++G + F+DVW++ IRSTPPSLQMLAA AF++L  +A  PA+P E++ LIE+VR T
Sbjct:   65 NCRRTCIVEQPSQVSAICTK-DRPCARSGQSAVLVGDKIYVFGGCDGVVVYNDLHCFDTVTHEWRVVHSEGGPTPRAAFGMCVGPGDEDFTIACGSNTQFMSAYSDVWSFNTRHRTWTKLFESPKALYGVSICWYGRILLMYAGTTGLEYCNHLYAFNSLASSVVKVSTTGICPSRRYKHESFILNDNMYVFGGGCFAPTEGCMFISRLNLRSLEWKQLHVDGDTSVARTAFSCCADPETLKVWVFGGFDADNTRLQAFQSYDMQSRKWENVASVCSPPSRAFHSMIYSQGSLFLMLGANGKRKFNDVWQYRIRSTPPSLQMLAAHAFLRLPHSACRPAIPDEMQSLIESVRLT 417
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A836CD99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD99_9STRA)

HSP 1 Score: 382 bits (980), Expect = 2.140e-128
Identity = 186/350 (53.14%), Postives = 238/350 (68.00%), Query Frame = 1 
Query:   34 SHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAEND-ISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDV---QTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESP-AVPHELRVLIETVRRT 1068
            SH+ W +L T GD P  RSGQGA VV   VYIFGGCD   + NDI  F + T EW  +T   GPS R +FG+C GPG  D TVACGC L    A +DIWSF+VR R W K F+SPRA YGVS+CW+   LL++GG++GV Y  +LYAF+L TG++ ++ TSG GPS+RYK   FV   ++Y+CGGG F+P    M M KLNLT+L W  L  + + +S  R A +CC D E+SKAW+FGGF     RLQAFQTFD+  N W +V   +   SP PRAFHSMVLC+G+L + LG+DG+  +DDVW++ IRSTPP LQ LA +AF+ L P  E P  VP E+R LI+ V+++
Sbjct:    9 SHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDA-VMQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTL-PGGECPHGVPGEMRTLIDAVKQS 356
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A836CDJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ9_9STRA)

HSP 1 Score: 348 bits (894), Expect = 8.000e-116
Identity = 157/301 (52.16%), Postives = 201/301 (66.78%), Query Frame = 1 
Query:   13 CSRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDK 915
            CSR  L  H EW  LNT GD PCARSGQ +VVV D +Y+FGGCDG    ND+  F     EW  +  + GP+ R +FG+C GPG ED T+ACG N     A +  WS++ R R WT+ F+SP+ALYGVS+CW+   LLMY G+TG  Y + LYAF L+   V K+ TSG  PS RYK E  +VD+ +Y+ GGG+FAP    M + +LNL SL W  ++ +ND STPR AFSCCVD ET K W+FGGF   N R+QAFQ +D+  N W  VQT+CSP  RAFHS++  +GSL L+LG++G +
Sbjct:    2 CSRYILNQHREWLHLNTFGDRPCARSGQSSVVVRDKIYVFGGCDGVVDYNDLHCFDTVMHEWSVMHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSYGWSYDTRRRKWTELFESPKALYGVSICWHGHILLMYAGTTGSEYCNHLYAFDLRIAGVVKVSTSGSCPSRRYKHESVIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPETLKVWVFGGFDADNTRIQAFQNYDLTSNEWKVVQTVCSPDARAFHSVIYAQGSLYLMLGANGKR 302
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A835Z6E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E7_9STRA)

HSP 1 Score: 299 bits (765), Expect = 3.540e-97
Identity = 135/261 (51.72%), Postives = 175/261 (67.05%), Query Frame = 1 
Query:   16 SRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDI 798
            S+C L  H EW  LNT G+ PCARSG  AV+V   +Y+FGGCDG+ V ND+  F   T EW+ I  +  P+ R +FG+C GPG ED T+ACG N     A +D+WSFN RHRTWT+ F+SP+ALYGVS+CW    LLMY G+ G+ Y + LYAF   T +V K+ T+G  PS  YK E F V++++Y+ GGG FAP  GRM +  L+L SL W  ++ +ND S PR AFS CV  ETSK W+FGGF   N  LQ+FQ++D+
Sbjct:    3 SKCLLNRHREWVLLNTFGNPPCARSGHAAVIVRGKIYVFGGCDGDVVYNDLHCFDTVTHEWRVIMSEGAPTPRAAFGMCAGPGDEDFTIACGSNTQFMSAYSDVWSFNTRHRTWTQLFESPKALYGVSICWYGRMLLMYAGTAGLEYCNHLYAFHSLTSSVIKVSTTGVCPSIWYKHESFAVNDDMYVFGGGCFAPTEGRMFISWLDLRSLEWKQVQVQNDTSIPRTAFSSCVGPETSKVWVFGGFDADNTCLQSFQSYDM 263
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A835YR08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR08_9STRA)

HSP 1 Score: 272 bits (696), Expect = 4.690e-87
Identity = 128/227 (56.39%), Postives = 163/227 (71.81%), Query Frame = 1 
Query:  388 YGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVRRT 1068
            YGVS+CW+   LLMY G+TG  YS+ LYAF  +T  V K+ TSG  PS RYK E F+VD+ +Y+ GGG+FAP    M + +LNL SL W  ++ +ND STPR AFSCCVD  T K W+FGGF V N RLQAFQ +D+  N W  VQT+CSP  RAFHSM+  +GSL L+LG++G + F+DVW++ IRSTPP LQMLAA A+++L   A  PA+P E+R LIE+VR T
Sbjct:   13 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLT 239
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A836C6J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6J2_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.530e-85
Identity = 117/210 (55.71%), Postives = 152/210 (72.38%), Query Frame = 1 
Query:   43 EWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAE 672
            EW QL T G  P + SGQGA VVD+ VY+FGGCDGE   ND+  F + T++W  I  Q GPS R +FG+C GPG    TVACGC ++   AL D+WSF+VRH TW+K F+SP+A+YGV +CW D  LL++GG+ GV YSD LYAF+L TG VA + TSG GPS+RYK E F+V E++++CGGGAFAP   RM M++LNL+SL W  ++ +
Sbjct:    1 EWSQLRTCGKVPSSLSGQGAAVVDERVYMFGGCDGEVALNDVHCFDVQTNKWCAIVCQEGPSPRAAFGMCSGPGEYAFTVACGCGIEQMSALGDMWSFDVRHHTWSKLFESPQAMYGVPICWYDGTLLLHGGTMGVHYSDALYAFNLDTGTVAPVVTSGNGPSKRYKHESFIVGEDMFVCGGGAFAPTERRMDMYRLNLSSLVWRCVKVK 210
[Close]
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Match: A0A835Z4J3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J3_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.770e-82
Identity = 126/274 (45.99%), Postives = 175/274 (63.87%), Query Frame = 1 
Query:  223 PSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHV--LEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIK--LFPTAESPAVPH 1032
            PS R   G C GPG  + T+  G  + T  A ADIWSF+VRH  W K FD P + YG S CW+ DNL+++GGSTG++Y DT+Y    +TGNV  +KT G+ PS+RYK E F+++  +Y+  GG F P+   M M  L+L + +WHV  +  E  +  PR A +CCVD  T+  W+FGGF  + +RL AFQT+D ++  W+ V T  +PP RAF+SMV  +G + LL+GS+G   F+DVW++ +R+TP SLQ LA  + +K  L  TA  PA  H
Sbjct:    8 PSPRGCCGHCCGPGNYEFTIVGGTTV-TDNAYADIWSFDVRHHVWAKLFDLPTSTYGASACWHGDNLIVFGGSTGMSYLDTVYVCDRRTGNVRLLKTHGQRPSKRYKHEAFIMENFMYIFAGGDFKPSMHNMDMHMLDLCTCTWHVATVAPEGVVPVPRCACACCVDPTTATLWVFGGFDANTDRLAAFQTYDTRKCSWSSVVTPQNPPARAFNSMVFREGVIWLLIGSNGGARFNDVWRYAVRTTPSSLQTLACNSIVKHGLPVTANVPAELH 280
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169287 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YN69_9STRA1.880e-292100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA21_9STRA6.560e-14154.42Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z6H5_9STRA1.200e-13754.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2J9_9STRA2.040e-13553.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CD99_9STRA2.140e-12853.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ9_9STRA8.000e-11652.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6E7_9STRA3.540e-9751.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YR08_9STRA4.690e-8756.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C6J2_9STRA1.530e-8555.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4J3_9STRA1.770e-8245.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:704316..705449 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169287|e_gw1.62.215.1
BRITEko00000,ko04131
KEGG koko:K20285
Descriptionnitrile biosynthetic process
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0379@1|root,KOG0379@2759|Eukaryota
Evalue2.22e-77
Seed ortholog2880.D7FP90
Hectar predicted targeting categoryother localisation
TranscriptId169609
TrackFilteredModels1
ProteinId169287
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169287gene_6575Tribonema minus UTEX_B_3156 geneContig_62 704316..705449 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6575_1exon_6575_1Tribonema minus UTEX_B_3156 exonContig_62 704316..705449 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6575CDS_6575Tribonema minus UTEX_B_3156 CDSContig_62 704316..705449 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169287Trimin1|169287|e_gw1.62.215.1Tribonema minus UTEX_B_3156 polypeptideContig_62 704316..705449 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6575 ID=mRNA_6575|Name=jgi.p|Trimin1|169287|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1134bp|location=Sequence derived from alignment at Contig_62:704316..705449- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCTCGAATTGCTCAAGGTGTGAGCTTGAAAGCCACAATGAGTGGCG
GCAGCTGAACACTGTAGGCGATGCGCCCTGTGCGCGCAGCGGACAAGGGG
CCGTTGTGGTGGATGACGTTGTCTACATTTTCGGAGGATGTGATGGTGAA
GCAGTTTCAAACGATATTCGTGCCTTCTATATTCACACTAGCGAGTGGCA
AAAAATTACACATCAGTTAGGACCATCTGCGCGCACATCATTCGGAATAT
GCTTAGGACCTGGTGTTGAAGACGTCACTGTTGCTTGCGGATGCAATTTA
GATACCCCCGGTGCGCTCGCTGACATTTGGTCGTTCAACGTAAGGCATCG
TACTTGGACCAAGCGCTTTGACTCACCTCGTGCATTGTATGGCGTATCTG
TGTGCTGGAACGACGATAATCTGCTCATGTATGGTGGCAGTACCGGCGTT
GCTTACTCTGACACTTTGTACGCTTTCAGTCTGAAAACCGGGAACGTTGC
AAAAATAAAAACATCTGGCGAAGGGCCCTCAGAGCGGTACAAACAGGAAA
TGTTTGTGGTGGATGAAAACTTGTACATGTGCGGTGGTGGCGCGTTCGCG
CCTGCTGCAGGTCGCATGCAGATGTTCAAACTCAACCTGACCTCGCTTTC
TTGGCATGTTCTAGAAGCTGAAAACGACATATCTACACCTAGAGCCGCTT
TCAGCTGCTGTGTAGATTCTGAAACGTCAAAAGCTTGGATTTTTGGTGGA
TTTTCCGTTCACAATAACCGTTTGCAAGCATTTCAAACCTTTGATATACA
AAGAAATGTTTGGAATGACGTGCAGACTCTATGCAGTCCGCCCCCTCGTG
CCTTCCATTCAATGGTGCTGTGCAAGGGATCCTTGCTCCTTTTACTAGGA
TCGGACGGCGACAAGATATTTGATGACGTGTGGAAATTTTGTATCCGTAG
CACTCCTCCGAGCTTGCAGATGCTAGCAGCTAAGGCTTTCATAAAGCTGT
TCCCAACTGCCGAATCTCCAGCAGTACCTCACGAGTTGCGGGTTCTTATT
GAGACAGTCAGGCGAACAGAACATCACTACAGTGGCAAGTGCAAAAAACG
GCCCTCTATCGGATGCTTACTCGCCCCCTACTAG
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protein sequence of jgi.p|Trimin1|169287

>Trimin1|169287|e_gw1.62.215.1 ID=Trimin1|169287|e_gw1.62.215.1|Name=jgi.p|Trimin1|169287|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=378bp
MGSNCSRCELESHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGE
AVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNL
DTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGV
AYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFA
PAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGG
FSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLG
SDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLI
ETVRRTEHHYSGKCKKRPSIGCLLAPY*
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mRNA from alignment at Contig_62:704316..705449-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6575 ID=mRNA_6575|Name=jgi.p|Trimin1|169287|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1134bp|location=Sequence derived from alignment at Contig_62:704316..705449- (Tribonema minus UTEX_B_3156 )
ATGGGCTCGAATTGCTCAAGGTGTGAGCTTGAAAGCCACAATGAGTGGCG
GCAGCTGAACACTGTAGGCGATGCGCCCTGTGCGCGCAGCGGACAAGGGG
CCGTTGTGGTGGATGACGTTGTCTACATTTTCGGAGGATGTGATGGTGAA
GCAGTTTCAAACGATATTCGTGCCTTCTATATTCACACTAGCGAGTGGCA
AAAAATTACACATCAGTTAGGACCATCTGCGCGCACATCATTCGGAATAT
GCTTAGGACCTGGTGTTGAAGACGTCACTGTTGCTTGCGGATGCAATTTA
GATACCCCCGGTGCGCTCGCTGACATTTGGTCGTTCAACGTAAGGCATCG
TACTTGGACCAAGCGCTTTGACTCACCTCGTGCATTGTATGGCGTATCTG
TGTGCTGGAACGACGATAATCTGCTCATGTATGGTGGCAGTACCGGCGTT
GCTTACTCTGACACTTTGTACGCTTTCAGTCTGAAAACCGGGAACGTTGC
AAAAATAAAAACATCTGGCGAAGGGCCCTCAGAGCGGTACAAACAGGAAA
TGTTTGTGGTGGATGAAAACTTGTACATGTGCGGTGGTGGCGCGTTCGCG
CCTGCTGCAGGTCGCATGCAGATGTTCAAACTCAACCTGACCTCGCTTTC
TTGGCATGTTCTAGAAGCTGAAAACGACATATCTACACCTAGAGCCGCTT
TCAGCTGCTGTGTAGATTCTGAAACGTCAAAAGCTTGGATTTTTGGTGGA
TTTTCCGTTCACAATAACCGTTTGCAAGCATTTCAAACCTTTGATATACA
AAGAAATGTTTGGAATGACGTGCAGACTCTATGCAGTCCGCCCCCTCGTG
CCTTCCATTCAATGGTGCTGTGCAAGGGATCCTTGCTCCTTTTACTAGGA
TCGGACGGCGACAAGATATTTGATGACGTGTGGAAATTTTGTATCCGTAG
CACTCCTCCGAGCTTGCAGATGCTAGCAGCTAAGGCTTTCATAAAGCTGT
TCCCAACTGCCGAATCTCCAGCAGTACCTCACGAGTTGCGGGTTCTTATT
GAGACAGTCAGGCGAACAGAACATCACTACAGTGGCAAGTGCAAAAAACG
GCCCTCTATCGGATGCTTACTCGCCCCCTACTAG
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Coding sequence (CDS) from alignment at Contig_62:704316..705449-

>mRNA_6575 ID=mRNA_6575|Name=jgi.p|Trimin1|169287|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1134bp|location=Sequence derived from alignment at Contig_62:704316..705449- (Tribonema minus UTEX_B_3156 )
ATGGGCTCGAATTGCTCAAGGTGTGAGCTTGAAAGCCACAATGAGTGGCG
GCAGCTGAACACTGTAGGCGATGCGCCCTGTGCGCGCAGCGGACAAGGGG
CCGTTGTGGTGGATGACGTTGTCTACATTTTCGGAGGATGTGATGGTGAA
GCAGTTTCAAACGATATTCGTGCCTTCTATATTCACACTAGCGAGTGGCA
AAAAATTACACATCAGTTAGGACCATCTGCGCGCACATCATTCGGAATAT
GCTTAGGACCTGGTGTTGAAGACGTCACTGTTGCTTGCGGATGCAATTTA
GATACCCCCGGTGCGCTCGCTGACATTTGGTCGTTCAACGTAAGGCATCG
TACTTGGACCAAGCGCTTTGACTCACCTCGTGCATTGTATGGCGTATCTG
TGTGCTGGAACGACGATAATCTGCTCATGTATGGTGGCAGTACCGGCGTT
GCTTACTCTGACACTTTGTACGCTTTCAGTCTGAAAACCGGGAACGTTGC
AAAAATAAAAACATCTGGCGAAGGGCCCTCAGAGCGGTACAAACAGGAAA
TGTTTGTGGTGGATGAAAACTTGTACATGTGCGGTGGTGGCGCGTTCGCG
CCTGCTGCAGGTCGCATGCAGATGTTCAAACTCAACCTGACCTCGCTTTC
TTGGCATGTTCTAGAAGCTGAAAACGACATATCTACACCTAGAGCCGCTT
TCAGCTGCTGTGTAGATTCTGAAACGTCAAAAGCTTGGATTTTTGGTGGA
TTTTCCGTTCACAATAACCGTTTGCAAGCATTTCAAACCTTTGATATACA
AAGAAATGTTTGGAATGACGTGCAGACTCTATGCAGTCCGCCCCCTCGTG
CCTTCCATTCAATGGTGCTGTGCAAGGGATCCTTGCTCCTTTTACTAGGA
TCGGACGGCGACAAGATATTTGATGACGTGTGGAAATTTTGTATCCGTAG
CACTCCTCCGAGCTTGCAGATGCTAGCAGCTAAGGCTTTCATAAAGCTGT
TCCCAACTGCCGAATCTCCAGCAGTACCTCACGAGTTGCGGGTTCTTATT
GAGACAGTCAGGCGAACAGAACATCACTACAGTGGCAAGTGCAAAAAACG
GCCCTCTATCGGATGCTTACTCGCCCCCTACTAG
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