mRNA_6515 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169225
Unique NamemRNA_6515
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: A0A835YMP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP1_9STRA)

HSP 1 Score: 291 bits (746), Expect = 1.360e-99
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
Query:    1 MRQRGTALAGAALRKQAGATAGSTRILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTAVV 462
            MRQRGTALAGAALRKQAGATAGSTRILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTAVV
Sbjct:    1 MRQRGTALAGAALRKQAGATAGSTRILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTAVV 154          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: A0A836CCH7_9STRA (Transmembrane subunit of succinate dehydrogenase/Fumarate reductase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 9.240e-51
Identity = 86/135 (63.70%), Postives = 104/135 (77.04%), Query Frame = 1
Query:   55 ATAGSTRILS-DYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTA 456
            A A S R+ S  Y E Q + GRP+SPHVT YRFP+ AISSITNR+TGV LVGGLYGIGAL+LVGVD Q +M+++ ++ +A   K+VVTFPLIYHY  AARHTIWDF PETV N SV +SS ++F AAG L+L  A
Sbjct:    3 AQAASQRVESHSYDELQQRRGRPISPHVTNYRFPIAAISSITNRITGVALVGGLYGIGALSLVGVDAQHIMSVIHDSILAGPVKLVVTFPLIYHYFAAARHTIWDFYPETVENKSVEKSSLLIFAAAGSLSLAAA 137          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: D8LD41_ECTSI (SDH3, succinate dehydrogenase subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD41_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 4.230e-45
Identity = 75/132 (56.82%), Postives = 91/132 (68.94%), Query Frame = 1
Query:   67 STRILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTAVV 462
            S +    Y  RQ +TGRPVSPHVT Y FP  A+SSI NRVTGV LV GLYGI    LVG D  GLM+ LG + V P  K+ V+FPL+YHYLGA RHT+WD+ PET+  A VA++SY L G +G ++L  A V
Sbjct:   45 SDKEKESYTARQARTGRPVSPHVTIYDFPPAALSSIANRVTGVALVAGLYGISGATLVGCDAAGLMSALGSSGVGPAVKLAVSFPLVYHYLGAVRHTVWDYMPETLQTAGVAKTSYALLGVSGAVSLGLAAV 176          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: A0A7S1XVJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVJ2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 8.560e-38
Identity = 70/116 (60.34%), Postives = 83/116 (71.55%), Query Frame = 1
Query:   88 YIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAG 435
            Y  RQ KTGRPVSPHVT Y FP VAISSI+ RVTG  L  GL GIGALALVGVD   LM+ +G +A+ PLAK  V++ L+YH+ GAARH +WD  PE + N  V Q+S  + GAAG
Sbjct:   55 YSARQKKTGRPVSPHVTIYAFPAVAISSISVRVTGCILSVGLGGIGALALVGVDTPALMSAVGSSAIGPLAKFAVSYSLVYHFFGAARHYVWDQSPEMLENDQVYQTSLGIMGAAG 170          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: A0A2D4BV84_PYTIN (Transmembrane protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV84_PYTIN)

HSP 1 Score: 128 bits (321), Expect = 7.820e-35
Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = 1
Query:   88 YIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLM--AMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTL 447
            Y ERQ + GRPVSPHVT YRFP+ A+SS+TNR T VGL  G      LA VGVD+  L+  A       AP++K  + FP+ YH L AARH +WD KPE +NN    +SSY +FGAAG ++L
Sbjct:   28 YTERQARLGRPVSPHVTIYRFPITAVSSVTNRFTSVGLTAGFAAASGLAAVGVDIPSLIYAAQGAIPGFAPISKFFIAFPISYHSLAAARHVLWDAKPELINNIDGPKSSYAVFGAAGLISL 149          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: W7TK90_9STRA (Succinate dehydrogenase cytochrome b subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK90_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.300e-33
Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 1
Query:   67 STRILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTAVV 462
            ST     Y ERQ +TGRPVSPHVT Y+FP+ A++SI+ RVTG  L  GL GI  LAL G DV  LM+ LG + V   AK++  FPLI+HY    RH  WD  P  +NN  VA++SYIL G+   ++L++  V
Sbjct:   41 STASKETYTERQARTGRPVSPHVTIYKFPITALTSISTRVTGGVLTVGLTGISLLALGGADVPMLMSSLGNSMVGVPAKVLFGFPLIFHYGSGLRHFFWDNNPNFLNNKGVAEASYILLGSTVAISLVSGFV 172          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: W4GL90_9STRA (Succinate dehydrogenase, cytochrome b556 subunit n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GL90_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.510e-32
Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 1
Query:   73 RILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETA--VAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTAVV 462
            R+LS Y ERQ + GRPVSPHV  Y FP+ A+SSITNRVTG  L GG   +GAL+++G DV  L+    E     AP++K VV FP+ YH+L  AR +IWD  P+ ++    A +SY LFG A  L+L  A +
Sbjct:   22 RLLS-YTERQARLGRPVSPHVEIYAFPITALSSITNRVTGTALSGGFAAVGALSVIGADVPSLIYSAQEIIPFFAPVSKFVVAFPITYHFLCGARQSIWDNNPDLLSPPQAAPTSYALFGGAAVLSLGAAAI 152          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: A0A6G0WI43_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI43_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.560e-32
Identity = 63/130 (48.46%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   79 LSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETA--VAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLLTAVV 462
            L  Y ERQ + GRPVSPHV  Y FPV A++SITNRVTGV L GG     ALA VG DV  L+    E      P++K+VV FP+ YH+L  ARH  W+  P+ +  + +A SSY +FG A  L+L  A +
Sbjct:   23 LVSYTERQARLGRPVSPHVEIYAFPVTALASITNRVTGVALSGGFAAAAALAAVGADVPALIHTAQEVIPFFTPVSKIVVAFPITYHFLNGARHAFWEQSPDVLEVSKIAPSSYAVFGGAAALSLGAAAI 152          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: A0A8K1CGD2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD2_PYTOL)

HSP 1 Score: 121 bits (303), Expect = 4.600e-32
Identity = 64/133 (48.12%), Postives = 82/133 (61.65%), Query Frame = 1
Query:   55 ATAGSTRILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGET--AVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTL 447
            ATA  +     Y ERQ + GRPVSP VT Y+FP+ A+SSITNR TGVGL  G     ALA VGVD+  ++    +     AP++K +V FP+ YH   AARH +WD  PE +N     +SSY +FGAA  L+L
Sbjct:   20 ATASLSTSAPTYTERQARLGRPVSPAVTIYKFPITALSSITNRATGVGLAAGFTAASALAAVGVDLPSVIYAAQDVIPGFAPISKFLVAFPITYHSFAAARHVVWDKNPELINKIDGPKSSYAIFGAATVLSL 152          
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Match: A0A8J2SI31_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SI31_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.630e-32
Identity = 73/144 (50.69%), Postives = 86/144 (59.72%), Query Frame = 1
Query:   37 LRKQAGATAGSTRILSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETV-NNASVAQSSYILFG----AAGGLTLLT 453
            LR Q+ A +        Y ERQ K GRP+SPHVT Y FP VAISSIT RVTGV L  G+ G+ A +L GVD    MA L         K +V FPL YHY GA RHT+WD KPET+ NN    +SSY++ G    AA GL  L+
Sbjct:   14 LRAQSAAFSAIPTPRPKYTERQEKLGRPMSPHVTTYAFPAVAISSITQRVTGVLLSVGVGGVAAGSLAGVD----MAALATAVSCYPVKFIVAFPLTYHYAGALRHTLWDRKPETMLNNKDAEKSSYLVMGGSTLAAAGLAALS 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169225 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMP1_9STRA1.360e-99100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCH7_9STRA9.240e-5163.70Transmembrane subunit of succinate dehydrogenase/F... [more]
D8LD41_ECTSI4.230e-4556.82SDH3, succinate dehydrogenase subunit 3 n=2 Tax=Ec... [more]
A0A7S1XVJ2_9STRA8.560e-3860.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2D4BV84_PYTIN7.820e-3552.46Transmembrane protein, putative n=1 Tax=Pythium in... [more]
W7TK90_9STRA2.300e-3350.00Succinate dehydrogenase cytochrome b subunit n=2 T... [more]
W4GL90_9STRA2.510e-3249.24Succinate dehydrogenase, cytochrome b556 subunit n... [more]
A0A6G0WI43_9STRA3.560e-3248.46Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1CGD2_PYTOL4.600e-3248.12Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8J2SI31_9STRA4.630e-3250.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:403422..405107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169225|e_gw1.62.199.1
BiGG ReactioniMM904.YMR118C,iND750.YMR118C
BRITEko00000,ko00001,ko00002
KEGG rclassRC00045
KEGG ReactionR02164
KEGG ModuleM00009,M00011,M00148
KEGG Pathwayko00020,ko00190,ko01100,ko01110,ko01120,ko01130,ko01200,ko04714,ko04932,ko05010,ko05012,ko05016,map00020,map00190,map01100,map01110,map01120,map01130,map01200,map04714,map04932,map05010,map05012,map05016
KEGG koko:K00236
GOsGO:0000104,GO:0002376,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005749,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006119,GO:0006121,GO:0006139,GO:0006163,GO:0006605,GO:0006626,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008177,GO:0008340,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0010259,GO:0015031,GO:0015833,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016491,GO:0016627,GO:0016635,GO:0016999,GO:0017038,GO:0017144,GO:0019637,GO:0019693,GO:0019752,GO:0019866,GO:0020037,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0042721,GO:0042742,GO:0042773,GO:0042775,GO:0042886,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045087,GO:0045184,GO:0045257,GO:0045273,GO:0045281,GO:0045283,GO:0045333,GO:0046034,GO:0046483,GO:0046906,GO:0046907,GO:0048037,GO:0048518,GO:0048519,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050789,GO:0050829,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0055085,GO:0055086,GO:0055114,GO:0061024,GO:0065002,GO:0065007,GO:0070469,GO:0070585,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072350,GO:0072521,GO:0072594,GO:0072655,GO:0072657,GO:0080134,GO:0090150,GO:0090151,GO:0097159,GO:0098542,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1902882,GO:1902883,GO:1902884,GO:1990204,GO:1990542
Preferred nameSDHC
Descriptionsuccinate dehydrogenase activity
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2009@1|root,KOG0449@2759|Eukaryota
Evalue6.94e-46
Seed ortholog2880.D8LD41
Hectar predicted targeting categorymitochondrion
TranscriptId169547
TrackFilteredModels1
ProteinId169225
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169225gene_6515Tribonema minus UTEX_B_3156 geneContig_62 403422..405107 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169225Trimin1|169225|e_gw1.62.199.1Tribonema minus UTEX_B_3156 polypeptideContig_62 403422..405107 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6515_2exon_6515_2Tribonema minus UTEX_B_3156 exonContig_62 403422..403678 -
exon_6515_1exon_6515_1Tribonema minus UTEX_B_3156 exonContig_62 404900..405107 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6515CDS_6515Tribonema minus UTEX_B_3156 CDSContig_62 404900..405107 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6515 ID=mRNA_6515|Name=jgi.p|Trimin1|169225|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=465bp|location=Sequence derived from alignment at Contig_62:403422..405107- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGCAGAGGGGCACGGCCCTCGCAGGCGCCGCGCTCCGCAAACAGGC
GGGAGCAACCGCTGGAAGCACAAGGATCCTGTCAGACTACATTGAGCGCC
AGAACAAGACAGGCAGGCCTGTTTCTCCGCACGTTACCGCGTACCGGTTC
CCAGTGGTAGCCATCTCATCTATCACCAACCGCGTCACCGGCGTGGGCCT
CGTTGGCGGGCTGTACGGAATCGGCGCGCTGGCGTTGGTCGGAGTGGATG
TGCAGGGCCTCATGGCCATGCTCGGAGAGACGGCGGTCGCGCCGCTCGCA
AAGATGGTCGTGACGTTCCCCCTCATCTACCACTACCTCGGCGCAGCGCG
GCACACCATCTGGGACTTCAAGCCGGAGACCGTGAACAACGCCTCGGTCG
CGCAGTCGAGCTACATACTGTTTGGTGCTGCTGGCGGCCTCACGCTGCTC
ACCGCTGTCGTCTGA
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protein sequence of jgi.p|Trimin1|169225

>Trimin1|169225|e_gw1.62.199.1 ID=Trimin1|169225|e_gw1.62.199.1|Name=jgi.p|Trimin1|169225|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=155bp
MRQRGTALAGAALRKQAGATAGSTRILSDYIERQNKTGRPVSPHVTAYRF
PVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLA
KMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTLL
TAVV*
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mRNA from alignment at Contig_62:403422..405107-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6515 ID=mRNA_6515|Name=jgi.p|Trimin1|169225|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1686bp|location=Sequence derived from alignment at Contig_62:403422..405107- (Tribonema minus UTEX_B_3156 )
ATGAGGCAGAGGGGCACGGCCCTCGCAGGCGCCGCGCTCCGCAAACAGGC GGGAGCAACCGCTGGAAGCACAAGGATCCTGTCAGACTACATTGAGCGCC AGAACAAGACAGGCAGGCCTGTTTCTCCGCACGTTACCGCGTACCGGTTC CCAGTGGTAGCCATCTCATCTATCACCAACCGCGTCACCGGCGTGGGCCT CGTTGGCGGTGAGACGTGCTTCAATTCAACTTCACCCTGCTTTACCTCCG TTCTCCACTTTGTTCAGCGTCACAGCTTTGTGTCGTATTTGGGTGATGAG AGGGCCCCGTAAGATCTTCTGGACACTGGTGCGCCGTGCCATCCTCAATG TTGCCTGCTCCCTGCACGCGAACCACATCGCACACGCTACGGTTGCAATC ATCGGCATTACCTCTCCCATTATCGGTCACGCGATGGCTTGGGTGTCTCC GAACTCGTGTATTTGATTGTCTAGCTGGTTTGGCCTCAGGTGCCGCAACT TATTTGTTGCCAAGGCCTCTGTAGCTGTGCATCGTATTGGCGTCGCCATT GAAGATCTTGCAACAGAGATCCGTGCAGACCTTTCACTTAATATGTTGAT TTGACCATCACTATTCAGTCAGTGATGGAGCGACTTGGCATCTGCAGGCA CCAAGCTGAAAACCAAACTGCTATCAATTGTATCAGAAGCCGTGGTCTTG TTAGGGTTGTAAACCGGTTCAAGCAACGAGATGACCGACTGGTGTGGCTG ACTGGCTGGGCAGGTTTGAGAGAGGCTGACTGGCTTTGCTGGCTAGCTGG CTGTTGGCTAGTTAAGGCCGGTAGTCTGCAGCGCTGCAATGTGCAGTGAG GAAAACTGGGTTACAGTCACGCTGCCGCAGCGGTGGCAGCAGGTGCAGCA GCAGCAGATGTGACTGTTGCAGCTGCTGCACATGACATGTACGGCATGGT TATCACAGTTAAACAGCAATAATCTGTCTGATTTTACTACACGAGTGTCA GTCCAAATCGAGAGTCAATTGCCAATAGGAAAATGTCACATCACCTGACA GCAGAGGCACTAGCAGCAGCAGCAGCAGCAGCAGTGCACAAGGCAGGTGT AGCAGCACAAAGGGGAGGCTGCTGACACGATTATTGTTGCACATCGTTGC AACACGCCGCATCAGGCTACTACTGATGGTTTCTATCGATGTCTCTAGCC ACATAGATGTTGGGTTAGTCTCCAATTCTAACTAATCATGTCGGTCATGT CATATGTGTGACAGTATAGCAAACAGGCATGCTTCAGATGTATGGGGTGC TCCTTGTGGTGCTGCAATCCACATCGTCTGGTACTTGACTCGAGGAGGAT GAACAGTTTCCGTTTTATCGGTTCATGCCTGACTTTCTTGCACTCACCCC CTGAGAATGTGTCACACTCCTGGCTGCAGGGCTGTACGGAATCGGCGCGC TGGCGTTGGTCGGAGTGGATGTGCAGGGCCTCATGGCCATGCTCGGAGAG ACGGCGGTCGCGCCGCTCGCAAAGATGGTCGTGACGTTCCCCCTCATCTA CCACTACCTCGGCGCAGCGCGGCACACCATCTGGGACTTCAAGCCGGAGA CCGTGAACAACGCCTCGGTCGCGCAGTCGAGCTACATACTGTTTGGTGCT GCTGGCGGCCTCACGCTGCTCACCGCTGTCGTCTGA
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Coding sequence (CDS) from alignment at Contig_62:403422..405107-

>mRNA_6515 ID=mRNA_6515|Name=jgi.p|Trimin1|169225|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=465bp|location=Sequence derived from alignment at Contig_62:403422..405107- (Tribonema minus UTEX_B_3156 )
ATGAGGCAGAGGGGCACGGCCCTCGCAGGCGCCGCGCTCCGCAAACAGGC
GGGAGCAACCGCTGGAAGCACAAGGATCCTGTCAGACTACATTGAGCGCC
AGAACAAGACAGGCAGGCCTGTTTCTCCGCACGTTACCGCGTACCGGTTC
CCAGTGGTAGCCATCTCATCTATCACCAACCGCGTCACCGGCGTGGGCCT
CGTTGGCGGGCTGTACGGAATCGGCGCGCTGGCGTTGGTCGGAGTGGATG
TGCAGGGCCTCATGGCCATGCTCGGAGAGACGGCGGTCGCGCCGCTCGCA
AAGATGGTCGTGACGTTCCCCCTCATCTACCACTACCTCGGCGCAGCGCG
GCACACCATCTGGGACTTCAAGCCGGAGACCGTGAACAACGCCTCGGTCG
CGCAGTCGAGCTACATACTGTTTGGTGCTGCTGGCGGCCTCACGCTGCTC
ACCGCTGTCGTCTGA
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