mRNA_6346 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|162768
Unique NamemRNA_6346
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: A0A835ZAE0_9STRA (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE0_9STRA)

HSP 1 Score: 639 bits (1647), Expect = 5.520e-231
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLERTHADIGGAAFDERIATPPRACAAEA 999
            SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLERTHADIGGAAFDERIATPPRACAAEA
Sbjct:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLERTHADIGGAAFDERIATPPRACAAEA 333
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: A0A251WID0_9CYAN (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase n=1 Tax=Alkalinema sp. CACIAM 70d TaxID=1934309 RepID=A0A251WID0_9CYAN)

HSP 1 Score: 296 bits (758), Expect = 6.420e-96
Identity = 163/316 (51.58%), Postives = 210/316 (66.46%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLERTHADIGGA 948
            +YT+VPT+ECFNRC+YC FR D   G+  WL +D A AQ+ +     T  EVLI+SGEV P+S  R+ WL  +  LC+ A  LG  PH NVGPLS  EM  ++A +VSMGLMLEQ++P L     VH HAPSK DP+ R  QL QAG LK+PFTTG+LLG+GE A D  ASL AIA +  +YGHIQECI+QPYSP        +GFPL A+P +V  AR+ILP ++ +Q+PPNLV    +LL CL+AGARDLGG+SP+DEVN  Y  P   +L + L  AG++L  RL ++ R   W+   LQ ++ R      G+
Sbjct:   10 AYTLVPTHECFNRCSYCNFRVD--LGSQGWLPIDQAEAQLRSL--PPTTCEVLILSGEVHPNSPQRSAWLQHIHQLCQLAFDLGFLPHTNVGPLSRQEMQQLKAVNVSMGLMLEQMTPNLLQT--VHCHAPSK-DPELRYQQLIQAGELKIPFTTGILLGLGEQADDRIASLEAIAQIHAQYGHIQECILQPYSPGMSETWMGQGFPLEALPELVHTARSILPEEITLQIPPNLVHQPEILLACLEAGARDLGGLSPIDEVNPDYPHPTPSQLRSCLEPAGWQLVSRLPIYPRYDRWLLPKLQTVVTRWRLAFDGS 318
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: B8HW37_CYAP4 (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HW37_CYAP4)

HSP 1 Score: 295 bits (755), Expect = 1.500e-95
Identity = 164/307 (53.42%), Postives = 211/307 (68.73%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLE 921
            +YT+VPTYECFNRC+YC FR +P  G   WLS++ A  Q+      G + E+LI+SGEV P S  RA WLAR+ SLC+ AL  G  PH NVGPLS AEMA ++  +VSMGLMLEQL+P L     VHRHAPSK  P+ RL QLE AG+L++PFTTG+LLG+GE AGD   SL+AIA +  R+ HIQE I+QPYSP    +    GFPL  +P +VA+ARAILP  V +Q+PPNL+    +LL CL+AGARDLGG+ P D VN  Y   ++  L+ +L   G+ L+ RL V+ ++   +PA LQP L+
Sbjct:   10 AYTLVPTYECFNRCSYCNFRVEP--GTDLWLSLESAQTQLERLKASGII-EILILSGEVHPHSQRRADWLARIESLCQLALDRGFLPHTNVGPLSYAEMARLKQVNVSMGLMLEQLTPDLL--NTVHRHAPSK-VPELRLQQLEWAGKLQIPFTTGLLLGIGETAGDWVESLQAIAQIQRRWYHIQEVILQPYSPGQQEQLAAPGFPLETLPEVVAIARAILPIDVTIQIPPNLIAQPDLLLACLEAGARDLGGLVPHDHVNPDYKHASLTVLSELLAQKGWDLQPRLPVYPQVDGLLPAHLQPYLQ 310
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: UPI0019F7F22E (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019F7F22E)

HSP 1 Score: 292 bits (748), Expect = 1.610e-94
Identity = 159/307 (51.79%), Postives = 208/307 (67.75%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLE 921
            +YT+VPTYECFNRC+YC FR DP  G + WL++  A  Q+    +  TV E+LI+SGEV P SA R  W AR+  LC+ ALS+G  PH N GPLS  EM  ++  +VSMGLMLEQL+P L     VH+HAPSK+ P+ RL QL  AG LK+PFTTG+LLG+GE   D +++L AIA++  R+G+IQE I+QPYS          GF L  +P +VA ARAILP  + +Q+PPNLV    +LL+CL+AGARDLGGISP DEVN  Y  P  D L ++L +AG++L  RLA++ +   W+   LQ  L+
Sbjct:   10 AYTLVPTYECFNRCSYCNFRTDP--GKSFWLTLSQAQQQLKR-FQSRTVSEILILSGEVHPHSARRKEWFARIYQLCKLALSMGFLPHTNAGPLSWIEMKQLKEVNVSMGLMLEQLTPKLLET--VHKHAPSKQ-PEVRLQQLIWAGELKIPFTTGLLLGIGETQADRQSTLEAIANLQQRWGNIQEVILQPYSRGTQQSLAAPGFDLYRLPEVVARARAILPKTITIQIPPNLVTKPNLLLDCLEAGARDLGGISPKDEVNPDYPHPTYDSLKSILESAGWQLIPRLAIYPQYYSWLSLSLQKALQ 310
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: UPI0016858911 (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG n=1 Tax=Alkalinema sp. FACHB-956 TaxID=2692768 RepID=UPI0016858911)

HSP 1 Score: 292 bits (747), Expect = 4.940e-94
Identity = 164/309 (53.07%), Postives = 206/309 (66.67%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAG-TRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLER 924
            +YT+VPTYECFNRC YC FR D   G   WLS+  A AQ+ +     +  EVLI+SGEV P+S  R+ WL  +  LC+ AL LG  PH NVGPLS  EM  ++A +VSMGLMLEQ++P L     VHRHAPSK DP+ R  QL QAG LK+PFTTG+LLG+GE   D  ASL  IA +  +YGHIQECI+QPYSP    TR G +GFPL A+P +V  AR+ILP  + +Q+PPNLV    +LL CL+AGARDLGG+SP+DEVN  Y  P   +L A L+  G++L  RL ++ +   W+   L   L R
Sbjct:   30 AYTLVPTYECFNRCTYCNFRVDV--GTQGWLSIAQAEAQLRSL--PPSTCEVLILSGEVHPNSPQRSAWLQHIHQLCQRALDLGFLPHTNVGPLSHQEMQQLKAVNVSMGLMLEQMTPNLLQT--VHRHAPSK-DPELRYQQLIQAGELKIPFTTGILLGLGEQVDDRIASLETIAQIHAQYGHIQECILQPYSPGTSETRMG-QGFPLEALPELVHTARSILPEDITLQIPPNLVHQPEILLACLEAGARDLGGLSPIDEVNPDYPHPTAAQLRACLDPQGWQLVPRLPIYPQYDRWLVPPLDAPLNR 330
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: A0A6H1TUN0_9CYAN (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase n=2 Tax=Oxynema TaxID=1492710 RepID=A0A6H1TUN0_9CYAN)

HSP 1 Score: 290 bits (742), Expect = 1.980e-93
Identity = 158/316 (50.00%), Postives = 212/316 (67.09%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLERTHADIGGA 948
            +YTVVPTYECFNRC+YC FR +P  G + WLS+++A  ++ A   +G + E+LI+SGEV P S+ R+PW+  +  L + AL LG  PH N GPLS  EMA ++  +VSMGLMLEQ++P L     VHRHAPSK  P  RL QLE AG L++P TTG+LLG+GE  GD   +L AIA V  R+GHIQE I+QP+ P +  +  L GF   A+P +VAMARAILP  + +Q+PPNLV    +LL C++AGARDLGGI P DEVN  Y  PA+ +L+ ++   G+ L  RL V+     W+   L+  ++R + +IG A
Sbjct:   19 AYTVVPTYECFNRCSYCNFRRNP--GESPWLSLEEARVRLEAIADRGVI-EILILSGEVHPGSSRRSPWIRHLHDLGQLALDLGFLPHTNAGPLSYEEMAQLKQVNVSMGLMLEQVTPQLLET--VHRHAPSK-VPTLRLQQLEWAGELRIPLTTGLLLGIGESPGDRRQTLEAIARVQQRWGHIQEVILQPHRPGSRQQEALPGFDDRALPDVVAMARAILPENIRLQIPPNLVAQPDILLACIEAGARDLGGIGPHDEVNPDYPHPAIAQLSEIVEPLGWHLDRRLPVYPAYYRWLTPSLKRAVDRWNGEIGSA 328
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: A0A2T2RZD3_9CYAN (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase n=1 Tax=Cyanobacteria bacterium QS_8_64_29 TaxID=1919134 RepID=A0A2T2RZD3_9CYAN)

HSP 1 Score: 289 bits (740), Expect = 2.610e-93
Identity = 165/313 (52.72%), Postives = 207/313 (66.13%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLERTHADI 939
            +YT+VPTYECFNRC YC FR +P +G  SWLS+  A  Q++     GT  E+L++SGEV P S  R  WL R+  L E AL++G  PH NVGPL  AEMA ++  SVSMGLMLEQL+PAL     VHR APSK +PQ RL QL  AG L++PFTTGVLLG+GE A D EA+L AIA +  R+GHIQE I+QP+S  +      EGF L  +P ++A ARA+LP  + +Q PPNLV  R +LL+CL AGARDLGGI P DEVN  Y       LAA+L  AG++L  RL V+ +  +W+   LQ   +R    I
Sbjct:   11 AYTLVPTYECFNRCTYCNFRLEPGQG--SWLSLAAAQRQLARLQASGTC-EILLLSGEVHPRSPQRGAWLQRIADLAELALAMGFLPHANVGPLQRAEMAQLKQMSVSMGLMLEQLTPALLQT--VHRQAPSK-EPQWRLQQLAWAGELQIPFTTGVLLGIGETAADREATLGAIARLHRRWGHIQEVILQPHSLGSSQAVAQEGFDLHQLPTLIARARALLPADIAIQFPPNLVGDRQLLLDCLAAGARDLGGIGPTDEVNPNYPHHQPRSLAALLAGAGWQLVPRLPVYPQYLDWLLPPLQAAAQRWQGAI 317
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: UPI001CA609E8 (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG n=1 Tax=Leptothermofonsia sichuanensis TaxID=2917832 RepID=UPI001CA609E8)

HSP 1 Score: 288 bits (736), Expect = 1.930e-92
Identity = 160/308 (51.95%), Postives = 201/308 (65.26%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLER 924
            +YT+VPTYECFNRC+YC FR DP  G + WLS+ DA  Q+ A    G + EVL++SGEV P S  R  W  R+  LCE ALSLG  PH N GPLS  EMA +R  +VSMGLMLEQ++P L     VHRHAPSK  P+ RL QL  AG L++PFTTG+LLG+GE   + + +L AIA +  R+GHIQE I+QPYSP          F    +   + +AR +LP  + +QVPPNL+R  G L+ CL+AG RDLGGI P DEVN  Y  P   ELAA L AAG+ L  RL V+ +  EW+P+ LQ  +E+
Sbjct:   13 AYTIVPTYECFNRCSYCNFRTDP--GKSPWLSLVDAEIQLKALKPAGVI-EVLVLSGEVHPQSPQRKIWFQRIYDLCELALSLGFLPHTNAGPLSQTEMAQLRTVNVSMGLMLEQVTPKLLQ--SVHRHAPSKL-PELRLQQLIWAGELQIPFTTGMLLGIGETVAERQETLTAIARIHQRFGHIQEVILQPYSPGKHEVWASSPFKSEDLVDTITLARQVLPTDITLQVPPNLIRDDGYLIACLEAGVRDLGGIGPRDEVNPNYPHPIDSELAATLKAAGWDLIPRLPVYPQYDEWLPSHLQTAVEK 314
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: A0A1E5QNQ9_9CYAN (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase n=1 Tax=Desertifilum sp. IPPAS B-1220 TaxID=1781255 RepID=A0A1E5QNQ9_9CYAN)

HSP 1 Score: 287 bits (734), Expect = 2.630e-92
Identity = 159/308 (51.62%), Postives = 203/308 (65.91%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLER 924
            +YT+VPTYECFNRC YC FR DP +    WL+++ A A++ A   QG + E+LI+SGEV P S  R  WL R+  LCE A++LG  PH NVGPL   EM  ++A +VSMGLM+EQ+SP L     VHRHAPSKR P+ RL QLE AG L++PFTTG+LLG+GE  GD   +L AIA +  R+GHIQE IIQPYS          GFPL  +P  +A AR  LP  + +Q+PPNLVR   +L+ CL+AGARDLGGI P DEVN  Y  P +  L  VL+  G+ L  RL V+ +   W+  DLQ  +++
Sbjct:   10 AYTLVPTYECFNRCEYCNFRVDPSQDV--WLTLEQAEARLQALRGQG-ICEILILSGEVHPESKRRDAWLERIEGLCELAIALGFLPHTNVGPLKYEEMLRLKAVNVSMGLMVEQVSPELMQT--VHRHAPSKR-PELRLQQLEWAGELQIPFTTGLLLGIGETEGDRRDTLEAIAQIHQRWGHIQEVIIQPYSLGNSQILNAPGFPLEQLPNAIAQARCALPDDITLQIPPNLVRYPDLLVACLEAGARDLGGICPRDEVNPDYPHPNLQALQEVLSTCGWYLYPRLPVYPQYEGWLNPDLQSRVQQ 311
[Close]
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Match: UPI0019FBC1E7 (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019FBC1E7)

HSP 1 Score: 287 bits (735), Expect = 2.820e-92
Identity = 161/325 (49.54%), Postives = 218/325 (67.08%), Query Frame = 1 
Query:    1 SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVREVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMAAVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLKVPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTRAG---LEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGARDLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPADLQPLLERTHADIGGAAFDERI 966
            +YT+VPTYECFNRC YC FR +P  G + WL + +A   + +   +G + E+LI+SGEV P S LR+ W  R+ +LCE ALSLG  PH NVGPLS AEMA ++  +VSMGLMLEQL+P L     VHR+APSK  P+ RL  LE AG L++PFTTG+LLG+GE A D + SL+A+A +  R+GH+QE I+QPYSPAA  ++    L+      +  +VA+AR ILPP + +Q+PPNL++    LL CL AGARDLGGI P+DEVN  Y  P + +L A L +AG++L  RL V+ +  +W+   LQ  +    + I  +AF  +I
Sbjct:   10 AYTLVPTYECFNRCTYCNFRTEP--GMSPWLELAEAERVLKSLQGRGVI-EILILSGEVHPESKLRSLWFERIYNLCELALSLGFLPHTNVGPLSLAEMAKLKEVNVSMGLMLEQLTPELMKT--VHRYAPSK-VPELRLQHLEWAGELRIPFTTGLLLGIGETAADWQESLQALARLHQRWGHLQEVILQPYSPAAKNQSETGFLKKTGFLKLKDVVALARDILPPDITLQIPPNLIQQPAALLACLQAGARDLGGIGPIDEVNPDYPHPHLQQLTAFLKSAGWQLVPRLPVYPQYDKWLNLRLQAAVTCWRSAINNSAFAVKI 328
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162768 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAE0_9STRA5.520e-231100.007,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
A0A251WID0_9CYAN6.420e-9651.587,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
B8HW37_CYAP41.500e-9553.427,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
UPI0019F7F22E1.610e-9451.797,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
UPI00168589114.940e-9453.077,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
A0A6H1TUN0_9CYAN1.980e-9350.007,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
A0A2T2RZD3_9CYAN2.610e-9352.727,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
UPI001CA609E81.930e-9251.957,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
A0A1E5QNQ9_9CYAN2.630e-9251.627,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
UPI0019FBC1E72.820e-9249.547,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:281461..286220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|162768|e_gw1.22.46.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC01381,RC03002,RC03007
KEGG ReactionR09396
KEGG ModuleM00378
KEGG Pathwayko00680,ko01120,map00680,map01120
KEGG koko:K11780
EC2.5.1.77
GOsGO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188
Preferred namecofG
DescriptionCatalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO)
COG categoryH
Max annot lvl1117|Cyanobacteria
EggNOG OGsCOG1060@1|root,COG1060@2|Bacteria,1G1FX@1117|Cyanobacteria,3KGZ1@43988|Cyanothece
Evalue2.46e-96
Seed ortholog395961.Cyan7425_0829
Hectar predicted targeting categoryother localisation
TranscriptId163090
TrackFilteredModels1
ProteinId162768
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162768gene_6346Tribonema minus UTEX_B_3156 geneContig_22 281461..286220 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162768Trimin1|162768|e_gw1.22.46.1Tribonema minus UTEX_B_3156 polypeptideContig_22 281461..286220 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6346_5exon_6346_5Tribonema minus UTEX_B_3156 exonContig_22 281461..281682 -
exon_6346_4exon_6346_4Tribonema minus UTEX_B_3156 exonContig_22 282423..282644 -
exon_6346_3exon_6346_3Tribonema minus UTEX_B_3156 exonContig_22 283803..283959 -
exon_6346_2exon_6346_2Tribonema minus UTEX_B_3156 exonContig_22 285108..285359 -
exon_6346_1exon_6346_1Tribonema minus UTEX_B_3156 exonContig_22 286072..286220 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6346CDS_6346Tribonema minus UTEX_B_3156 CDSContig_22 286072..286220 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6346 ID=mRNA_6346|Name=jgi.p|Trimin1|162768|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1002bp|location=Sequence derived from alignment at Contig_22:281461..286220- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCGTACACGGTGGTGCCCACGTACGAGTGCTTCAACCGCTGCGCGTACTG
CACGTTCCGCGCGGACCCGCGGCGCGGCGCGGCGTCGTGGCTGAGCGTTG
ATGACGCTACCGCCCAGATGAGCGCTGCCATGCGCCAGGGCACCGTCAGG
GAAGTGCTCATCATGAGCGGCGAGGTGGCGCCCTCGTCCGCGCTGCGCGC
CCCCTGGCTCGCGCGCGTACTGTCCCTCTGCGAGGCAGCGCTCAGCCTCG
GCCTCCACCCGCACGTCAACGTGGGGCCGCTCAGCGCGGCGGAGATGGCC
GCGGTGCGCGCGCGCAGCGTCAGCATGGGGCTCATGCTCGAGCAGCTGTC
GCCGGCGCTGGCGGCGCGCGGCGGCGTGCACCGGCACGCGCCCAGCAAGA
GGGACCCCCAAGCGCGCCTCGCGCAGCTCGAGCAAGCGGGGCGCCTGAAG
GTGCCCTTCACGACGGGCGTGCTGCTGGGCGTCGGCGAGGGCGCGGGCGA
CACGGAGGCATCGCTGCGCGCCATCGCTGACGTCGCGCTGCGCTACGGCC
ACATTCAGGAGTGCATCATCCAGCCCTACAGCCCCGCGGCGGGCACGCGT
GCGGGGCTCGAGGGCTTTCCGCTGAGCGCTGTGCCAGCGATTGTGGCCAT
GGCGCGCGCCATACTGCCGCCGCAGGTGGTGGTGCAGGTGCCGCCGAACC
TCGTGCGCGCGCGCGGGGTGCTGCTGGAGTGCCTCGACGCGGGCGCGCGC
GACCTGGGCGGCATCAGCCCCCTGGACGAGGTCAACTCCGCCTATGACTT
CCCCGCCGTCGACGAGCTTGCAGCAGTGCTCAATGCAGCGGGCTACCGCC
TGCGCGAGCGCCTGGCGGTGCACGACAGGCTGCGCGAGTGGGTGCCCGCA
GATCTGCAGCCGCTGCTCGAGCGCACGCACGCTGACATAGGCGGGGCCGC
ATTCGACGAGCGAATTGCGACGCCGCCGCGCGCGTGTGCTGCAGAAGCGT
AG
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protein sequence of jgi.p|Trimin1|162768

>Trimin1|162768|e_gw1.22.46.1 ID=Trimin1|162768|e_gw1.22.46.1|Name=jgi.p|Trimin1|162768|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=334bp
SYTVVPTYECFNRCAYCTFRADPRRGAASWLSVDDATAQMSAAMRQGTVR
EVLIMSGEVAPSSALRAPWLARVLSLCEAALSLGLHPHVNVGPLSAAEMA
AVRARSVSMGLMLEQLSPALAARGGVHRHAPSKRDPQARLAQLEQAGRLK
VPFTTGVLLGVGEGAGDTEASLRAIADVALRYGHIQECIIQPYSPAAGTR
AGLEGFPLSAVPAIVAMARAILPPQVVVQVPPNLVRARGVLLECLDAGAR
DLGGISPLDEVNSAYDFPAVDELAAVLNAAGYRLRERLAVHDRLREWVPA
DLQPLLERTHADIGGAAFDERIATPPRACAAEA*
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mRNA from alignment at Contig_22:281461..286220-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6346 ID=mRNA_6346|Name=jgi.p|Trimin1|162768|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4760bp|location=Sequence derived from alignment at Contig_22:281461..286220- (Tribonema minus UTEX_B_3156 )
TCGTACACGGTGGTGCCCACGTACGAGTGCTTCAACCGCTGCGCGTACTG
CACGTTCCGCGCGGACCCGCGGCGCGGCGCGGCGTCGTGGCTGAGCGTTG
ATGACGCTACCGCCCAGATGAGCGCTGCCATGCGCCAGGGCACCGTCAGG
TGAGAGCAATGCTGTGCACGCTCTGTGTGTGTGTGTGTGCGTGCGTGTGT
GTGTGTGTGTGTGTGTGTGTATGCGCGCGTATGTGTGCGTGCATGTGCTC
TGTTTTCGCTCTCTCAGTTGTGAGCACTCTGCAGCGATGCTCAGCAAGCT
TTCATGCCCTCGTCGCCGCGCCGCCTGTGCGGCGTGACACAAGAGTGGAC
TGAGTGTGTTCGCCGTTGTGTTTTTGTTTGGCGCGCACGCGATACTGATT
TCCCTGCTCGTACCCTGATCCCTGCACTCACTTTCAGACTAAGGCTCCGA
TGTCACCATATAACTAAGCAACACCAGAGCTACGCACTCGCCCCATTGCC
CCAGGGCTTTGAGAGGTTTCAGCAGAAGCCTCACCATAGCACTCACGCCT
CCTTCGCACGGGGAGATCCCGACCTTGACCACACCCTATCCCTAGTGCAA
CCCTAACCCTCATCAAGCCACACGCGCACCCATGCAGGCGGGTGCTGACA
CGCTGTGCACACGCGCGCACGCGCCCACGCAAGTCAGTGCTCATCATGAG
CGGCGAGGTGGCCCCCTCATCCGCTCGCCCCTGACCCTGACTCAGACCGG
TTGGCGCAGGGGTGCGCAGGTGCTCTGCGCGCACACACACGCGCACCCAT
GCAGACGAGCGCTGACACGCTCCGTGCACACGCGCATGCGCGCGCGCCCG
AAACCACGCAGGGAAGTGCTCATCATGAGCGGCGAGGTGGCGCCCTCGTC
CGCGCTGCGCGCCCCCTGGCTCGCGCGCGTACTGTCCCTCTGCGAGGCAG
CGCTCAGCCTCGGCCTCCACCCGCACGTCAACGTGGGGCCGCTCAGCGCG
GCGGAGATGGCCGCGGTGCGCGCGCGCAGCGTCAGCATGGGGCTCATGCT
CGAGCAGCTGTCGCCGGCGCTGGCGGCGCGCGGCGGCGTGCACCGGCACG
CGCCCAGCAAGAGGTGCAGTTGGCAGCGTTTCGCTCTTTGTAAAGCACTT
TGGCAGCAGGAAGTGGTTTCTGCTGAGGTGTTTGCTCTGTTTGATGGTAG
GGCACTGCAAGTACTTAGCTAGGCCTCACAATGATCAAAGCCCAACAGTG
CTGGTTCCGCTAAGAGCCATGACAAGCTGTTCCTGTTTCTTACTCTCAAA
AACTCGCGCTGGCCACAAGACGTTTGCGCATGGATCATGGAGGGCAGGGT
TAGAGTTAGGAAGCGTGTATGGTGTGTGCCGCCGTGAGGTGCAACTGCCA
GAAAAGCGTACTGCAACAAATGATAGGCGTGCGCACTCAGCTTATCGCCG
CCAGGGAGAGTGGGGCAGAGTGGCGCAACAGCTACACGGCTGGTAGGCGT
TCGAGATGCGTGAAACCTTGGCAGTAAACTACGGTACTGCTATTGTTGGC
CTAGGGGCAAGGGTCCGAGTAGTTGGTCAACAGCTACGGCGAAGGGCTCA
GGAGGAGGGTGTCCACTGCCCTTCTTAGCGTTTTGCGTTGATGGTTGCTG
ACCAAGTTGACCACATCCTTGTCTTCCTGCTTTATTCATATGGTCATACT
TTCATCATAGCCTGGAGGTTTGGCATTCTGAAAAAGTTGTCACGTCACGT
GTACTGTTATTAAGGGCCAGGGCAGCCTGGGCAGGCCTGCACATTGAACT
TTGTCACAACGCTGAGTGTAGAGGCGATTTTTGGGGTTCACCGCAGCGCG
TTGTCTGACATGCTCAGTAGCCTTTGCCCCCCCTTGCCCCGCACACTGCT
CAAGCAGAGCACCCCTGCTCCAATGACTGCAATCAGTCATCTGATACCGT
GTAGCAGAGGTGTGCTCCACAGTACTCAGCAGCACATGCACCTGGAAGCT
CCTGTCCTTGTCGCTGTTGCTGCAGCAGTTGCGTTTCTGTCGTAACGCAC
GCGCGCACGGCACCGACGCATTGTCTAACCCTAACCCTAAACCACCACAC
TGGTCCCAGAACGCGCGCAATCCGGCACGCTACACACACGTGAAACATAC
AAGCCACGCGCTAATATCTTTCGTGCGGCACGATGGTCCAGGCCCCTCTT
GAGCAGCTTGGTTGAAGTAGATGCATGATGAAAAATTATGTATTCTGTAT
GTTGACGGCAGGGACCCCCAAGCGCGCCTCGCGCAGCTCGAGCAAGCGGG
GCGCCTGAAGGTGCCCTTCACGACGGGCGTGCTGCTGGGCGTCGGCGAGG
GCGCGGGCGACACGGAGGCATCGCTGCGCGCCATCGCTGACGTCGCGCTG
CGCTACGGCCACATTCAGGTGAATTACTCAAAGTCATTGACTTGATGGGG
GTGCGGGGCAGTTGAAGGCGGCCTGAGAATGTATTTTTGATGAAGGGGGT
GCAGCGGAGGCGGCGCTGCGCGCCATCGCGGACGCCGCGCTGCGCTACGG
CCACATACAGGTGCATTCCTCAAGCGTGACTTCAAAGTTGATGTTGAAGG
CTGTAAGGCGCGCTAATTTCGATGAAGGGGTGCAGCGCAGGCGTCGCCGA
GCGCCATTGCGGACGTTGCGGTGCGCTACGACCACATACAGGCGTGTACT
TCAACTGGATGTCGGAGGCTGTGAGGCTACTTCTGGTGAAGGGGGTGCAA
GCCAGCTAGCAGGTTCTGTGACTGCGGTGGTTTTGCAATAGTGTAGTGTT
GGTCTTGCGCCATCGCTGATGTCGCGCAGCGCTACGGCCACATACAGGTG
ACGTACTCAGAGTCGATTGATTTTGCGGGGGCGCGGGGCAGTAGGAAGGA
TTTGAGGAGGTTCCAGGTGTTTGTGATTGGGCGCGCCATCGCCTTTGTTG
CGCTGCGATACACAGGTGAACTTCCATGCAGCGCACTACAGTTGCTGAAG
GGGGTCGATAGCAGCGCGGAGACGTGAGCCGACACGTCTTTGCGGCCCCC
CAACACAAAATGAAGAGGCAGGAAAGTATTGCGCGTCGGCGCCTGATGTG
ACGTGGCCGTTGGAGTAGATGGGACACCAGTGGCAGCGCTCGGCAATCTT
CACGCGATGCGATTGCATTGCGCAGCTGCTTCTGCAACAGGCGCGCTGTG
GTAGGGACTGCGCCGACGCTGTCGCAGTGCAGCGTAGGCATGTGTAATCA
GGCGGCCACAGTCTGATGCACACTTCACAGTGTACACGCATGCCGCGCTC
TCATATGTCTGCTCAAATGTATGCAGCAGTCGGCGGTGCAGTAGCGCATG
TACAGAACGCTGCACACAGTCTTGCAGTTTCGACCTGCTGTTGAGTCGCG
CCCCTCATCTGGCGCCTGTCCTGCCCGGCATGCGCACACCCAACATCAAG
CAGTCTCTTAACCACGCGCGCATGTGCCAGCCCCCCCCCCCCAGTGCTGA
ACCCCCGATGCTGCACTGCCAAGTTGACCTTCACCCCCCCCCCCCCAATC
CCAACCCTAACCCCGACCCTGATCAGGAGTGCATCATCCAGCCCTACAGC
CCCGCGGCGGGCACGCGTGCGGGGCTCGAGGGCTTTCCGCTGAGCGCTGT
GCCAGCGATTGTGGCCATGGCGCGCGCCATACTGCCGCCGCAGGTGGTGG
TGCAGGTGCCGCCGAACCTCGTGCGCGCGCGCGGGGTGCTGCTGGAGTGC
CTCGACGCGGGCGCGCGCGACCTGGGCGGCATCAGCCCCCTGGACGAGGT
GCTGATAATGAAGTACAAAAGTTTGGTTGTGGGGTGTTGGTGGTAGTGTG
AAGAGGGGGAAGCCTGTTTGCGTTTGAGTCTCTCATCGGAGAAGGAATGT
TGCATTGAGTGCACATCCAAAGAGAGGGCTCTTCGCGCCCCTGGCGAAGC
GAAATGAGTAAAAAGTACAAAAAGACACACATGGTCATGTCGTTCAGACG
CTATCGGCAATGCGCATTGAGACACTTTCAAAGTGTTCACAAAGACACTG
TAGATTTTGGTTGCAGGCTGGACACCCACCATCTAGGCTTCTTCGCGCCC
TGAGCAAGAACTGATGAAAAGTACACAAGACTCATACTTCTGAAGTACAA
GTGAAGTTGAGGCGTTTGAGATTGAGTGTGGGACGCATGCCCGCGTCCTC
TGCATGATCCATTGCAGCGCCACTTTGATTGGTCGCCGTCTGCGCGCGTG
CGACCTGGTGCTGAGTGCGTGTCGCCAGCGCAGCGCCTTGTGGCATAGAC
GCGGCGTGTCCCTGCATCACTTGCTTGAGCCGTTGTCACACTCAGCCACG
ACGCACACCATGCATGCAGCGCCACGCACGGTGCGTCTTCGTTGAGCCCT
GTTGCACCCTTTTTGCACGGCAACCCCATTTGAGCGATGGCGCAGACACC
AGGCGGCGTGTACTTCAAAATACGTAGTAATGACGTCTGACTTTCGCGCT
GTCCCCCAATGTCCCCCAATCGCATCGGTCACGCCCAGGTCAACTCCGCC
TATGACTTCCCCGCCGTCGACGAGCTTGCAGCAGTGCTCAATGCAGCGGG
CTACCGCCTGCGCGAGCGCCTGGCGGTGCACGACAGGCTGCGCGAGTGGG
TGCCCGCAGATCTGCAGCCGCTGCTCGAGCGCACGCACGCTGACATAGGC
GGGGCCGCATTCGACGAGCGAATTGCGACGCCGCCGCGCGCGTGTGCTGC
AGAAGCGTAG
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Coding sequence (CDS) from alignment at Contig_22:281461..286220-

>mRNA_6346 ID=mRNA_6346|Name=jgi.p|Trimin1|162768|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1002bp|location=Sequence derived from alignment at Contig_22:281461..286220- (Tribonema minus UTEX_B_3156 )
TCGTACACGGTGGTGCCCACGTACGAGTGCTTCAACCGCTGCGCGTACTG
CACGTTCCGCGCGGACCCGCGGCGCGGCGCGGCGTCGTGGCTGAGCGTTG
ATGACGCTACCGCCCAGATGAGCGCTGCCATGCGCCAGGGCACCGTCAGG
GAAGTGCTCATCATGAGCGGCGAGGTGGCGCCCTCGTCCGCGCTGCGCGC
CCCCTGGCTCGCGCGCGTACTGTCCCTCTGCGAGGCAGCGCTCAGCCTCG
GCCTCCACCCGCACGTCAACGTGGGGCCGCTCAGCGCGGCGGAGATGGCC
GCGGTGCGCGCGCGCAGCGTCAGCATGGGGCTCATGCTCGAGCAGCTGTC
GCCGGCGCTGGCGGCGCGCGGCGGCGTGCACCGGCACGCGCCCAGCAAGA
GGGACCCCCAAGCGCGCCTCGCGCAGCTCGAGCAAGCGGGGCGCCTGAAG
GTGCCCTTCACGACGGGCGTGCTGCTGGGCGTCGGCGAGGGCGCGGGCGA
CACGGAGGCATCGCTGCGCGCCATCGCTGACGTCGCGCTGCGCTACGGCC
ACATTCAGGAGTGCATCATCCAGCCCTACAGCCCCGCGGCGGGCACGCGT
GCGGGGCTCGAGGGCTTTCCGCTGAGCGCTGTGCCAGCGATTGTGGCCAT
GGCGCGCGCCATACTGCCGCCGCAGGTGGTGGTGCAGGTGCCGCCGAACC
TCGTGCGCGCGCGCGGGGTGCTGCTGGAGTGCCTCGACGCGGGCGCGCGC
GACCTGGGCGGCATCAGCCCCCTGGACGAGGTCAACTCCGCCTATGACTT
CCCCGCCGTCGACGAGCTTGCAGCAGTGCTCAATGCAGCGGGCTACCGCC
TGCGCGAGCGCCTGGCGGTGCACGACAGGCTGCGCGAGTGGGTGCCCGCA
GATCTGCAGCCGCTGCTCGAGCGCACGCACGCTGACATAGGCGGGGCCGC
ATTCGACGAGCGAATTGCGACGCCGCCGCGCGCGTGTGCTGCAGAAGCGT
AG
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