mRNA_6278 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349722
Unique NamemRNA_6278
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A836CC10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC10_9STRA)

HSP 1 Score: 429 bits (1102), Expect = 7.170e-149
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1 
Query:    1 MAAPACGTNQLALVMGIQRRSTXXXXXXXXXXXXXXXXXXALQYMVDGGLDVTGPGLGDLLHTLAVSFVTDVDADDTSDISSAMNSATLGDADTSGGCCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGHKYASCSNAGVDSGGXXXXXXXXXXXXXXXXXXXXXSTSGGCSPIAMMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRERTPEEVEREARFQDMMAAAQVEDRNFCTFNG 915
            MAAPACGTNQLALVMGIQRRSTXXXXXXXXXXXXXXXXXXALQYMVDGGLDVTGPGLGDLLHTLAVSFVTDVDADDTSDISSAMNSATLGDADTSGGCCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGHKYASCSNAGVDSGGXXXXXXXXXXXXXXXXXXXXXSTSGGCSPIAMMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRERTPEEVEREARFQDMMAAAQVEDRNFCTFNG
Sbjct:    1 MAAPACGTNQLALVMGIQRRSTXXXXXXXXXXXXXXXXXXALQYMVDGGLDVTGPGLGDLLHTLAVSFVTDVDADDTSDISSAMNSATLGDADTSGGCCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGHKYASCSNAGVDSGGXXXXXXXXXXXXXXXXXXXXXSTSGGCSPIAMMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRERTPEEVEREARFQDMMAAAQVEDRNFCTFNG 305
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A067CYV2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CYV2_SAPPC)

HSP 1 Score: 66.6 bits (161), Expect = 4.160e-9
Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 1 
Query:  529 MMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRR 819
            ++ FL+ A    +  R  D +TPLH A     +  AA L+   ADVNAVAQDD MPL CAEA L A     D  R  + A +  LL++  AKRTWRR
Sbjct:  120 VLRFLLHAHLDINHQRKPDLWTPLHVACAKNFVGIAALLLLYDADVNAVAQDDLMPLNCAEAVLNANGALVDDERRESNARLVALLVEHNAKRTWRR 216
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A1V9Z5Y4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5Y4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.950e-8
Identity = 46/94 (48.94%), Postives = 52/94 (55.32%), Query Frame = 1 
Query:  574 RAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRERT-PEEVEREA 852
            R  D +TPLH A     +  AA L+   ADVNAVA DD MPL CAE  L       D A     A +  LLLD+ AKRTWRR +  PE VER A
Sbjct:  135 RKRDLFTPLHVACTKNFVGVAALLLLYDADVNAVANDDLMPLNCAERVLVEQDVLADEATIERNAKLIRLLLDNHAKRTWRRPKPEPEPVERAA 228
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A6G0WSI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSI9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.660e-8
Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = 1 
Query:  529 MMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRE 822
            ++ FL++A    +  R  D +TPLH A     L  A+ L+  GADVNA+A++D MPL CAE       +  D    +  A    LL D+GA+RTWRR+
Sbjct:  122 LLHFLLQAQMDVNFQRKRDLFTPLHVACAKTFLGVASILVMYGADVNAIAKEDLMPLNCAE-------RVSDEVNDKLVA----LLKDAGARRTWRRQ 208
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A225W5B3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5B3_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.470e-5
Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 1 
Query:  529 MMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRE 822
            ++ FL+ AG   +  R  D YT LH A      P A  L+  GADVNA+A DD+MPL CA       A + +  R +    +   LL++ A+ TWRR+
Sbjct:  120 LIRFLLDAGVDVNWQRKSDLYTALHVACCKNLFPIAYLLVLYGADVNAIAADDSMPLACAHNAGQTRALSEEDNRQKEL--LVSFLLENQARETWRRQ 215
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A833TEN5_PHYIN (Ankyrin repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TEN5_PHYIN)

HSP 1 Score: 55.8 bits (133), Expect = 5.430e-5
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1 
Query:  529 MMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRE 822
            ++ FL+ AG   +  R  D YT LH A      P A  L+  GADVNA+A DD+MPL CA   +  +     G + +    V   L+D+ A+RTWR++
Sbjct:  120 LIRFLLDAGVDVNWQRKADLYTALHVACCKNLYPIAYLLVLYGADVNAIAADDSMPLVCAN-NIGYSTPLSKGDQTQKELLV-SFLIDNQARRTWRKQ 215
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A8K1C7L8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7L8_PYTOL)

HSP 1 Score: 54.7 bits (130), Expect = 5.740e-5
Identity = 41/100 (41.00%), Postives = 53/100 (53.00%), Query Frame = 1 
Query:  529 MMEFLVKAGQSASAPRAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDL---LLDSGAKRTWRR 819
            ++  L+ AG   +  R GD YT LH A  +        L+  GADVNA+A +D MPL CAE    A          RA A+ R+L   LLD+ A+RTWRR
Sbjct:  131 VLRLLLDAGVDVNWQRPGDLYTVLHVACRSNLYAITYLLLIYGADVNAIALNDDMPLLCAERVNTAVLSP------RALASHRELVSLLLDAQARRTWRR 224
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: A0A6A5AFP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFP7_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.940e-5
Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 1 
Query:  574 RAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRERTPEEVEREARFQDMMAAAQVEDRNFCTFN 912
            R GD +TPLH A        A+ L+  GADVNA+A DD MPL CAE  +A+     + A   +   V +LL   GA+ TWRR++ P +V      Q +  ++Q +  +F + N
Sbjct:   65 RQGDLFTPLHVACAKNFYGVASLLLLYGADVNAIAADDLMPLNCAERCVASPQ---NDAMTNSNTLV-ELLKKHGARPTWRRQQ-PAQVPPTQPDQTVDLSSQFKVLSFSSHN 172
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BLAST of jgi.p|Trimin1|349722 vs. uniprot
Match: W4G748_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G748_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 9.840e-5
Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 1 
Query:  574 RAGDFYTPLHCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGARARACAAVRDLLLDSGAKRTWRRERTPEEVEREARFQDMMAAAQVEDRNFCTFN 912
            R GD +TPLH A        A+ L+  GADVNA+A DD MPL CAE  +A+     + A   +   V +LL   GA+ TWRR++ P +V      Q +  ++Q +  +F + N
Sbjct:  140 RQGDLFTPLHVACAKNFYGVASLLLLYGADVNAIAADDLMPLNCAERCVASPQ---NDAMTNSNTLV-ELLKKHGARPTWRRQQ-PAQVPATQPDQTVDLSSQFKVLSFSSHN 247
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349722 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A836CC10_9STRA7.170e-149100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067CYV2_SAPPC4.160e-945.36Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9Z5Y4_9STRA1.950e-848.94Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0WSI9_9STRA5.660e-839.80Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A225W5B3_9STRA2.470e-537.76Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A833TEN5_PHYIN5.430e-537.76Ankyrin repeat n=1 Tax=Phytophthora infestans TaxI... [more]
A0A8K1C7L8_PYTOL5.740e-541.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A5AFP7_9STRA5.940e-537.17Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4G748_9STRA9.840e-537.17Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:736612..739084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349722|estExt_Genemark1.C_Ctg_470099
DescriptionAnkyrin repeat
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2BD6S@1|root,2S11V@2759|Eukaryota
Evalue5.31e-07
Seed ortholog112098.XP_008609352.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-11_005490.1
TranscriptId350044
TrackFilteredModels1
ProteinId349722
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349722gene_6278Tribonema minus UTEX_B_3156 geneContig_47 736612..739084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349722Trimin1|349722|estExt_Genemark1.C_Ctg_470099Tribonema minus UTEX_B_3156 polypeptideContig_47 736612..739077 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6278_1exon_6278_1Tribonema minus UTEX_B_3156 exonContig_47 736612..736734 +
exon_6278_2exon_6278_2Tribonema minus UTEX_B_3156 exonContig_47 737219..737373 +
exon_6278_3exon_6278_3Tribonema minus UTEX_B_3156 exonContig_47 737521..737923 +
exon_6278_4exon_6278_4Tribonema minus UTEX_B_3156 exonContig_47 738571..738683 +
exon_6278_5exon_6278_5Tribonema minus UTEX_B_3156 exonContig_47 738954..739084 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6278CDS_6278Tribonema minus UTEX_B_3156 CDSContig_47 736612..736734 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6278UTR3_6278Tribonema minus UTEX_B_3156 three_prime_UTRContig_47 739078..739084 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6278 ID=mRNA_6278|Name=jgi.p|Trimin1|349722|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=925bp|location=Sequence derived from alignment at Contig_47:736612..739084+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGCGCCTGCGTGCGGCACGAATCAGCTGGCGCTGGTGATGGGGAT
CCAACGGCGCTCAACTGCGTGCGGCACGAGTCAGCTGGCACTGGCGATGG
AGATCCAGCAGTGCTCAACGGCGCTGCAGTACATGGTGGACGGCGGCCTG
GACGTGACGGGGCCCGGCCTTGGCGACCTGCTCCACACGCTGGCAGTTTC
ATTCGTAACGGACGTCGACGCCGATGACACCAGCGACATCAGCAGCGCCA
TGAATTCGGCGACTCTCGGCGATGCTGACACCAGCGGTGGGTGCTGCCGC
GGCGCGTGCTGCACCAACAGCACCGCCGCCGACAGTCCCGATGGCAGCGG
CGGCGACGGCACTGGCGGCAGCGGCAGCAGCAGCAACGGCCACAAATACG
CGAGCTGCAGTAATGCAGGCGTCGACAGTGGCGGCGGCGGCGGTGGCGGC
GGCCGCGGCATAGGCGACAGCGGCGGCGACGGCAACGGCAGTGCCAGCAG
CACCAGCGGCGGTTGCAGCCCTATCGCCATGATGGAGTTTCTGGTGAAGG
CGGGGCAGAGCGCCAGCGCTCCGCGCGCCGGCGACTTCTACACGCCGCTG
CACTGCGCCGTCGGCGCGGCGTCGCTGCCCGCGGCGGCAGCGCTCATACG
CCTCGGCGCGGACGTGAACGCGGTGGCGCAGGACGACACGATGCCGCTGA
CATGCGCCGAGGCGGAGCTGGCCGCCGCCGCGAAGGCTGGCGACGGCGCC
AGGGCGCGCGCCTGCGCCGCCGTGCGCGACTTGCTGCTCGACAGTGGCGC
AAAGCGGACGTGGCGGCGGGAGCGTACGCCAGAAGAGGTAGAGCGCGAGG
CTAGGTTCCAGGATATGATGGCCGCCGCGCAAGTTGAGGACAGAAATTTC
TGCACCTTCAATGGATGAAGAATCA
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protein sequence of jgi.p|Trimin1|349722

>Trimin1|349722|estExt_Genemark1.C_Ctg_470099 ID=Trimin1|349722|estExt_Genemark1.C_Ctg_470099|Name=jgi.p|Trimin1|349722|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=306bp
MAAPACGTNQLALVMGIQRRSTACGTSQLALAMEIQQCSTALQYMVDGGL
DVTGPGLGDLLHTLAVSFVTDVDADDTSDISSAMNSATLGDADTSGGCCR
GACCTNSTAADSPDGSGGDGTGGSGSSSNGHKYASCSNAGVDSGGGGGGG
GRGIGDSGGDGNGSASSTSGGCSPIAMMEFLVKAGQSASAPRAGDFYTPL
HCAVGAASLPAAAALIRLGADVNAVAQDDTMPLTCAEAELAAAAKAGDGA
RARACAAVRDLLLDSGAKRTWRRERTPEEVEREARFQDMMAAAQVEDRNF
CTFNG*
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mRNA from alignment at Contig_47:736612..739084+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6278 ID=mRNA_6278|Name=jgi.p|Trimin1|349722|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2473bp|location=Sequence derived from alignment at Contig_47:736612..739084+ (Tribonema minus UTEX_B_3156 )
ATGGCAGCGCCTGCGTGCGGCACGAATCAGCTGGCGCTGGTGATGGGGAT
CCAACGGCGCTCAACTGCGTGCGGCACGAGTCAGCTGGCACTGGCGATGG
AGATCCAGCAGTGCTCAACGGCGGTGATGGCGTTGCTGAGCAGTGCAGCG
CATCGAGCAGCTGCAGCGCTCGACTCGCATCGCGTCGCACGCGCGCACAG
AGGGCGTTGCCGCACACGCCGGCGCTGACGCGACGGCAGACGCATCGCGC
ACCAATGCGACCACCGTTTGTTGGCGTGCCGAGCTCACAACGGCTTTAGT
GCCGAGTGCGCATGCGCTTGCTGCAATAGCAGATGGAGTGCAATTTTGAG
TAGAGGGCATCGTTCACGACAGGCACAAACCGCTGGCCCCAGAGCCTTGC
ACTTGCCCCGGCGATGCAGTATTAAAGATGCACATATGAACGGTGATCGC
CATGTTGAAGTCACAACGCAGCACTGCTCTGCACTTGCCCCAGCGATGCA
GTGTTGAAGATGCACATATGAACGGTGATCACTATGTTGAAGTTACAATG
CAGCGCTGCTCAACATCTCCCCCCCCCCCCCCCCCCCCCCTGCCGCCCCC
TGCGCAGCTGCAGTACATGGTGGACGGCGGCCTGGACGTGACGGGGCCCG
GCCTTGGCGACCTGCTCCACACGCTGGCAGTTTCATTCGTAACGGACGTC
GACGCCGATGACACCAGCGACATCAGCAGCGCCATGAATTCGGCGACTCT
CGGCGATGCTGAGTGCGCCAGTGGTGCTGTTGAGCACTGTGGCTGCGCCG
TACATACCCTATGCGTTGCGTGTGACAGTGCTCAAAGCACGGGCTGCGTC
GTGCGTGCCCCGGCCGGTGCGTGTGGCGGCGCGCAGTGCGACGGCGCCGC
CTGCCGCAGCACCAGCGGTGGGTGCTGCCGCGGCGCGTGCTGCACCAACA
GCACCGCCGCCGACAGTCCCGATGGCAGCGGCGGCGACGGCACTGGCGGC
AGCGGCAGCAGCAGCAACGGCCACAAATACGCGAGCTGCAGTAATGCAGG
CGTCGACAGTGGCGGCGGCGGCGGTGGCGGCGGCCGCGGCATAGGCGACA
GCGGCGGCGACGGCAACGGCAGTGCCAGCAGCACCAGCGGCGGTTGCAGC
CCTATCGCCATGATGGAGTTTCTGGTGAAGGCGGGGCAGAGCGCCAGCGC
TCCGCGCGCCGGCGACTTCTACACGCCGCTGCACTGCGCCGTCGGCGCGG
CGTCGCTGCCCGCGGCGGCAGCGCTCATACGCCTCGGCGCGGACGTGAAC
GCGGTGGCGCAGGTGCGGCGACGCGGTGCTATGCGGCTGCTGCTAAATAG
TGCTTGTTTGTAGGTGTGTGTGTGACTGTGCGGCGCCAGCGCAGGGCCGG
TGGTGCTGCGGAGTGCCATGAGAGCTGAGCGGCGGGGGTTTGCATGCTGC
CACACATGCGCTTGTGCTGCTGCTGGTTGCAGCGCTGCTCAGTAGCATGT
GCGCGTGCTGCCGCGTGCGCTCGCGCTGCTGCTGGCCGCAGCGCTGCTCA
GCAGCGGTGTGTCAGATACCTCGAGTGCGGCACAGGCACGACCGCGGCAG
TGCACTGCTGGCATTCCATCTGGGCACCGCCACCTCCGGAGAAGCACAGC
GACATGAGCCCTCGACAGAAGCCATTGTCATGTTGCGGCAGCATGTGCTG
CTCAGTGGAACATTCACCGCAACACCAGCCATACTGATGTTTCAAAGCAG
GCGCCGCTGAGCGCTGGTGAAGTGGTTTGCACTGACGCACGTTGACCTCT
GCCTGCGTGAACTTCAGCGCTTCAGCCACGAGGCGGGGCTCACCTCTTGC
CCCCCTCCCCCCCACACACACCTCACACACACACACCTCGCTTGCTGTCC
CCCCCCCTTCACACACACACACACACATCGCTTGCTCCCCCTCCGCCCCC
CCTGTGCAGGACGACACGATGCCGCTGACATGCGCCGAGGCGGAGCTGGC
CGCCGCCGCGAAGGCTGGCGACGGCGCCAGGGCGCGCGCCTGCGCCGCCG
TGCGCGACTTGCTGCTCGACAGGTGACATGCGCGGTGGTCGCTGTTTGAC
CTTGGTCTTAATCTCCAACCCATGGTCAAGGTGGCGTCGCTATTGAACTC
GGTTGCTTGAATTCTTCGAGGCGCGCTCAAGGATGTTCCGCTTTGCTTGC
TGGTGAATGGCATGGATGCATGTCACGATGAACACTTCAACTTGGCGTGT
TCCTTGCAATCAAGCCCATTCCTACATCTCCCCGCAGCTCTGACCCAGCA
CTGCTGTGCATGCGCCACCCCCGTGTCATTGTCGTGTGGCAGTGGCGCAA
AGCGGACGTGGCGGCGGGAGCGTACGCCAGAAGAGGTAGAGCGCGAGGCT
AGGTTCCAGGATATGATGGCCGCCGCGCAAGTTGAGGACAGAAATTTCTG
CACCTTCAATGGATGAAGAATCA
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Coding sequence (CDS) from alignment at Contig_47:736612..739084+

>mRNA_6278 ID=mRNA_6278|Name=jgi.p|Trimin1|349722|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=918bp|location=Sequence derived from alignment at Contig_47:736612..739084+ (Tribonema minus UTEX_B_3156 )
ATGGCAGCGCCTGCGTGCGGCACGAATCAGCTGGCGCTGGTGATGGGGAT
CCAACGGCGCTCAACTGCGTGCGGCACGAGTCAGCTGGCACTGGCGATGG
AGATCCAGCAGTGCTCAACGGCGCTGCAGTACATGGTGGACGGCGGCCTG
GACGTGACGGGGCCCGGCCTTGGCGACCTGCTCCACACGCTGGCAGTTTC
ATTCGTAACGGACGTCGACGCCGATGACACCAGCGACATCAGCAGCGCCA
TGAATTCGGCGACTCTCGGCGATGCTGACACCAGCGGTGGGTGCTGCCGC
GGCGCGTGCTGCACCAACAGCACCGCCGCCGACAGTCCCGATGGCAGCGG
CGGCGACGGCACTGGCGGCAGCGGCAGCAGCAGCAACGGCCACAAATACG
CGAGCTGCAGTAATGCAGGCGTCGACAGTGGCGGCGGCGGCGGTGGCGGC
GGCCGCGGCATAGGCGACAGCGGCGGCGACGGCAACGGCAGTGCCAGCAG
CACCAGCGGCGGTTGCAGCCCTATCGCCATGATGGAGTTTCTGGTGAAGG
CGGGGCAGAGCGCCAGCGCTCCGCGCGCCGGCGACTTCTACACGCCGCTG
CACTGCGCCGTCGGCGCGGCGTCGCTGCCCGCGGCGGCAGCGCTCATACG
CCTCGGCGCGGACGTGAACGCGGTGGCGCAGGACGACACGATGCCGCTGA
CATGCGCCGAGGCGGAGCTGGCCGCCGCCGCGAAGGCTGGCGACGGCGCC
AGGGCGCGCGCCTGCGCCGCCGTGCGCGACTTGCTGCTCGACAGTGGCGC
AAAGCGGACGTGGCGGCGGGAGCGTACGCCAGAAGAGGTAGAGCGCGAGG
CTAGGTTCCAGGATATGATGGCCGCCGCGCAAGTTGAGGACAGAAATTTC
TGCACCTTCAATGGATGA
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