mRNA_6217 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349692
Unique Name	mRNA_6217
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349692 vs. uniprot
Match: A0A836CBD7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD7_9STRA)

HSP 1 Score: 1214 bits (3141), Expect = 0.000e+0
Identity = 767/767 (100.00%), Postives = 767/767 (100.00%), Query Frame = 1

Query:    1 MERGRRSLGLPLLYEGLALLTYSSAAIEDGDLEGGEAANLHKHRSETVEEGGHPPQEALDEVTPPDPETSTVEVMHSPALAVRFDFSSSGGSSGNXXXXXXXXXXXXXXXXXXXXXGLDANSGALQLCMALADEGLLQVLVTFASAAQFYNSVDEVMLQSPALADGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASKHILLLRTHHTSARFAEQLTRSALSDASMEPTARAVRLAAGLSCGDYDILAALLPGAMSSAAAGSEGQAVDAGPNASLPREGDIEAAAXXXXXXXXXTAGFEDVAGSGAVIEGNSDGGSGSSTAPGVQHVGDGDDDGSSFDSISSNTQSXXXSNIISASGAHGSIDHQALQQAPYDLHAAASAIVEERRQQLLREWGLLLPAEPSRQLQPDQPPPPQHYVPLWEVLGQLSLPQEQGNAQXXXXXXXXXXAVPELLATCSVTGNQLHQMVRDGWLDVVPDSDSLWGQVTVRIPAFWRRPQAAGDGEGTADGAARAPHTHELLLPLQATLLERAQLTTLDNCLLTPAPLTRVAFRQMCSDAGGGDXXXXXXXXXXXXXXXXXXCSSSSAVAGRYIQTCLELAHIRREVALLERDRGELGRWWHAIGQVRAEFRGRREGLEEAQWTLAQLELIRQERQAAVLANEARSRARRLQAQATDTITAFQRDIASAVDAAXXXXXXXEKAFNAETQTYQHLQLPSVATASGVEEAVIADIEAGTRMRPEPFNTECVECEGSGESSAAQG 2301
            MERGRRSLGLPLLYEGLALLTYSSAAIEDGDLEGGEAANLHKHRSETVEEGGHPPQEALDEVTPPDPETSTVEVMHSPALAVRFDFSSSGGSSGNXXXXXXXXXXXXXXXXXXXXXGLDANSGALQLCMALADEGLLQVLVTFASAAQFYNSVDEVMLQSPALADGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASKHILLLRTHHTSARFAEQLTRSALSDASMEPTARAVRLAAGLSCGDYDILAALLPGAMSSAAAGSEGQAVDAGPNASLPREGDIEAAAXXXXXXXXXTAGFEDVAGSGAVIEGNSDGGSGSSTAPGVQHVGDGDDDGSSFDSISSNTQSXXXSNIISASGAHGSIDHQALQQAPYDLHAAASAIVEERRQQLLREWGLLLPAEPSRQLQPDQPPPPQHYVPLWEVLGQLSLPQEQGNAQXXXXXXXXXXAVPELLATCSVTGNQLHQMVRDGWLDVVPDSDSLWGQVTVRIPAFWRRPQAAGDGEGTADGAARAPHTHELLLPLQATLLERAQLTTLDNCLLTPAPLTRVAFRQMCSDAGGGDXXXXXXXXXXXXXXXXXXCSSSSAVAGRYIQTCLELAHIRREVALLERDRGELGRWWHAIGQVRAEFRGRREGLEEAQWTLAQLELIRQERQAAVLANEARSRARRLQAQATDTITAFQRDIASAVDAAXXXXXXXEKAFNAETQTYQHLQLPSVATASGVEEAVIADIEAGTRMRPEPFNTECVECEGSGESSAAQG
Sbjct:    1 MERGRRSLGLPLLYEGLALLTYSSAAIEDGDLEGGEAANLHKHRSETVEEGGHPPQEALDEVTPPDPETSTVEVMHSPALAVRFDFSSSGGSSGNXXXXXXXXXXXXXXXXXXXXXGLDANSGALQLCMALADEGLLQVLVTFASAAQFYNSVDEVMLQSPALADGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASKHILLLRTHHTSARFAEQLTRSALSDASMEPTARAVRLAAGLSCGDYDILAALLPGAMSSAAAGSEGQAVDAGPNASLPREGDIEAAAXXXXXXXXXTAGFEDVAGSGAVIEGNSDGGSGSSTAPGVQHVGDGDDDGSSFDSISSNTQSXXXSNIISASGAHGSIDHQALQQAPYDLHAAASAIVEERRQQLLREWGLLLPAEPSRQLQPDQPPPPQHYVPLWEVLGQLSLPQEQGNAQXXXXXXXXXXAVPELLATCSVTGNQLHQMVRDGWLDVVPDSDSLWGQVTVRIPAFWRRPQAAGDGEGTADGAARAPHTHELLLPLQATLLERAQLTTLDNCLLTPAPLTRVAFRQMCSDAGGGDXXXXXXXXXXXXXXXXXXCSSSSAVAGRYIQTCLELAHIRREVALLERDRGELGRWWHAIGQVRAEFRGRREGLEEAQWTLAQLELIRQERQAAVLANEARSRARRLQAQATDTITAFQRDIASAVDAAXXXXXXXEKAFNAETQTYQHLQLPSVATASGVEEAVIADIEAGTRMRPEPFNTECVECEGSGESSAAQG 767

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349692 vs. uniprot

BLAST of jgi.p|Trimin1|349692 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CBD7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_47	contig	Contig_47:282523..287400 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349692\|estExt_Genemark1.C_Ctg_470040
Hectar predicted targeting category	signal peptide
TranscriptId	350014
Track	FilteredModels1
ProteinId	349692

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349692	gene_6217	Tribonema minus UTEX_B_3156	gene	Contig_47 282523..287400 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349692	Trimin1\|349692\|estExt_Genemark1.C_Ctg_470040	Tribonema minus UTEX_B_3156	polypeptide	Contig_47 282525..287400 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6217_4	exon_6217_4	Tribonema minus UTEX_B_3156	exon	Contig_47 282523..282821 -
exon_6217_3	exon_6217_3	Tribonema minus UTEX_B_3156	exon	Contig_47 283409..285286 -
exon_6217_2	exon_6217_2	Tribonema minus UTEX_B_3156	exon	Contig_47 286796..286876 -
exon_6217_1	exon_6217_1	Tribonema minus UTEX_B_3156	exon	Contig_47 287356..287400 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_6217	UTR3_6217	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_47 282523..282524 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6217	CDS_6217	Tribonema minus UTEX_B_3156	CDS	Contig_47 287356..287400 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_47:282523..287400-
coding sequence from alignment at Contig_47:282523..287400-

spliced messenger RNA

>mRNA_6217 ID=mRNA_6217|Name=jgi.p|Trimin1|349692|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2303bp|location=Sequence derived from alignment at Contig_47:282523..287400- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCGCGGGCGGCGCAGCTTGGGCTTGCCGCTGCTGTACGAGGGCCT
GGCACTGCTGACATACAGCAGCGCAGCAATTGAAGATGGGGATCTGGAGG
GAGGAGAGGCAGCGAACCTCCACAAGCACCGCTCAGAGACAGTCGAGGAA
GGGGGGCACCCGCCCCAAGAGGCACTGGATGAAGTGACGCCACCTGATCC
AGAAACTTCAACAGTTGAAGTGATGCACAGCCCCGCTCTGGCGGTGCGAT
TTGACTTCAGCAGCAGCGGCGGCAGCAGCGGCAACGGCAGCAGCAGCAGC
AGCGGTGGCAGCAGCAGCGGCGGCAGCAGTAGCGGCAGCGGCAGCGGCGG
ACTTGACGCGAACAGCGGCGCGCTGCAGCTGTGCATGGCGCTGGCCGACG
AGGGGCTGCTGCAGGTGCTCGTCACCTTTGCATCAGCTGCTCAGTTCTAC
AATAGCGTTGATGAAGTGATGCTCCAGTCACCAGCATTGGCGGATGGCGG
CAGCGGCAGCGGCGCTGGCATCAACGCAGGCACTGGCGATGGCGGCGGCG
GCGGCAGCAACGATAACGGCAGCAGCAGCACCTATGGCAGCAGCAGCAGC
AGCGGTAACGGCGCCTCCAAGCACATACTCCTGCTGAGGACCCATCACAC
GAGCGCGCGCTTTGCTGAGCAGCTGACGCGCTCTGCGCTGAGCGATGCCA
GCATGGAGCCCACGGCGCGCGCAGTCAGACTGGCTGCGGGGCTTTCGTGC
GGCGACTATGATATCCTTGCGGCGCTGCTGCCAGGAGCAATGTCGAGCGC
TGCTGCAGGTAGTGAGGGGCAAGCAGTTGACGCTGGGCCGAACGCCAGCC
TGCCTCGCGAAGGTGATATTGAAGCAGCAGCGGCAGCAGCAGCAGCAGCA
GCAGCAGCAACTGCTGGGTTTGAAGATGTTGCTGGCAGCGGCGCTGTGAT
TGAGGGCAACAGTGACGGCGGCAGCGGCAGCAGTACTGCGCCGGGCGTCC
AACACGTTGGTGATGGTGATGATGATGGCAGCAGCTTTGACAGCATTAGC
AGCAATACCCAGAGCAACACCCAGAGCAACATCATCAGTGCAAGCGGCGC
ACACGGCAGCATCGACCACCAAGCCCTGCAGCAGGCGCCGTATGACTTGC
ATGCGGCAGCCAGCGCCATCGTTGAAGAGAGGCGCCAGCAGCTGCTGCGC
GAGTGGGGTTTGCTGCTACCAGCGGAGCCATCACGACAGTTACAGCCTGA
TCAGCCGCCACCACCACAGCATTACGTGCCGCTGTGGGAGGTGCTGGGCC
AGCTGAGTCTGCCGCAGGAGCAAGGCAACGCTCAGCAGCAGCAGCAGCAG
CAGCGCAGCGCAGCCGCCGTGCCAGAGCTCCTCGCTACATGCTCCGTGAC
CGGCAATCAGCTGCACCAGATGGTCCGTGACGGTTGGCTGGACGTGGTGC
CAGACTCAGACTCACTGTGGGGACAAGTCACAGTCCGCATTCCCGCATTC
TGGCGGCGACCGCAGGCGGCAGGAGATGGGGAGGGTACCGCTGACGGCGC
AGCACGCGCGCCTCACACTCATGAGCTGCTGCTGCCGCTGCAGGCGACGC
TGCTCGAGCGCGCTCAGCTCACTACGCTGGACAACTGCCTGCTGACGCCA
GCGCCGCTGACGCGCGTCGCGTTCAGGCAAATGTGCAGTGACGCCGGCGG
CGGCGACAGCGGCGGCGCCGACAACAGTGGCGGCAGCGGCGGCAGCGGCA
GCGGTGGCGGCTGCAGTAGCAGCAGTGCAGTAGCAGGGCGGTACATCCAG
ACGTGCCTGGAGCTGGCGCACATCAGGCGTGAGGTTGCCCTGCTGGAGCG
CGACAGAGGGGAGCTGGGGCGGTGGTGGCACGCTATTGGGCAGGTGCGCG
CGGAGTTTAGGGGGCGGCGCGAGGGGCTGGAGGAGGCACAGTGGACGCTG
GCGCAGCTGGAGCTTATACGGCAGGAGCGGCAGGCGGCCGTGTTGGCCAA
CGAGGCAAGGAGCAGAGCCAGAAGACTGCAAGCGCAAGCCACCGACACCA
TCACTGCCTTTCAACGCGACATTGCGTCGGCAGTAGACGCGGCAGCGGCA
GCAGCGGCAGCAGCAGAAAAAGCCTTCAACGCAGAAACTCAGACGTATCA
ACACCTGCAGCTGCCATCGGTAGCGACAGCCAGCGGGGTGGAAGAGGCTG
TAATCGCCGACATAGAAGCGGGCACCAGGATGCGCCCCGAGCCGTTCAAC
ACTGAGTGTGTTGAGTGTGAGGGTAGTGGGGAGAGCAGTGCTGCACAGGG
GGG

protein sequence of jgi.p|Trimin1|349692

>Trimin1|349692|estExt_Genemark1.C_Ctg_470040 ID=Trimin1|349692|estExt_Genemark1.C_Ctg_470040|Name=jgi.p|Trimin1|349692|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=767bp
MERGRRSLGLPLLYEGLALLTYSSAAIEDGDLEGGEAANLHKHRSETVEE
GGHPPQEALDEVTPPDPETSTVEVMHSPALAVRFDFSSSGGSSGNGSSSS
SGGSSSGGSSSGSGSGGLDANSGALQLCMALADEGLLQVLVTFASAAQFY
NSVDEVMLQSPALADGGSGSGAGINAGTGDGGGGGSNDNGSSSTYGSSSS
SGNGASKHILLLRTHHTSARFAEQLTRSALSDASMEPTARAVRLAAGLSC
GDYDILAALLPGAMSSAAAGSEGQAVDAGPNASLPREGDIEAAAAAAAAA
AAATAGFEDVAGSGAVIEGNSDGGSGSSTAPGVQHVGDGDDDGSSFDSIS
SNTQSNTQSNIISASGAHGSIDHQALQQAPYDLHAAASAIVEERRQQLLR
EWGLLLPAEPSRQLQPDQPPPPQHYVPLWEVLGQLSLPQEQGNAQQQQQQ
QRSAAAVPELLATCSVTGNQLHQMVRDGWLDVVPDSDSLWGQVTVRIPAF
WRRPQAAGDGEGTADGAARAPHTHELLLPLQATLLERAQLTTLDNCLLTP
APLTRVAFRQMCSDAGGGDSGGADNSGGSGGSGSGGGCSSSSAVAGRYIQ
TCLELAHIRREVALLERDRGELGRWWHAIGQVRAEFRGRREGLEEAQWTL
AQLELIRQERQAAVLANEARSRARRLQAQATDTITAFQRDIASAVDAAAA
AAAAAEKAFNAETQTYQHLQLPSVATASGVEEAVIADIEAGTRMRPEPFN
TECVECEGSGESSAAQG

mRNA from alignment at Contig_47:282523..287400-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6217 ID=mRNA_6217|Name=jgi.p|Trimin1|349692|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4878bp|location=Sequence derived from alignment at Contig_47:282523..287400- (Tribonema minus UTEX_B_3156 )
ATGGAGCGCGGGCGGCGCAGCTTGGGCTTGCCGCTGCTGTACGAGGTAAG
CGTGTAGTTCTTATCTATAAGGGAGTCTTTTGAGTTTTTTGAGTTGTGTT
CTTAAAGGCGTGGATGCCTTGTGATTCAGACAGGAAGAGAATGCAGCAGC
ACACCATATGAAATCTGCGAGCTTGCAGTTGCAACTCATCAGGAGCGCAT
GGCAAATGTCCGCTGTTGCTGACAGGGTCATCGTTGAAGTAGGTGGCGGT
CAGAGCACAGAGACACATGGCTCCAGGAATGTGTTCCGCCAGTGCCTCAT
TTTGGTGCAGTGCTATGACCGTATTATCCATAATCAGGCCCATTGGGCGA
GTTGCTTCATGAGGGCGAAATCAGGGGCAATTTGCCCTCAAGGAGTCAGC
GTTATATGAGGAGCTGATTCGGTATGCAGACAATGCGGGCACCCGTGAAG
GAGGACGCTTTTGCTTGGAGTATCGGATGCACGGCACTGCGTCGCTGCTA
CACCCTGCACTTGCATAATATCAGGGCCTGGCACTGCTGACATACAGCAG
CGCAGCAATTGAAGATGGGGATCTGGAGGGAGGAGAGGCAGCGAACCTCC
ACAAGGTACCTTCTCAGGGCATATAATCAACTGGCACCTTCCAGCAGTAC
CAAAGTCTGGCGCTGCTGATGTAGAGCAGTCCATTGCTGCTGATGTACAG
CAGTCCATTGCTGGGCTGCTGTACATCAGATCCTATGCCCTGACAAGGGT
TCTTGTTGAAGTGAGCATTGCAAGATTTGCTGCATCTCCTCAAGATCACC
ATCTTCAATTGCAGGACTGCTGTACACCAGCAGCGCCGGGCTGGCACTAC
GCGTGCACAGGCTGTGGCAGCAACGTCGTGACAAGCATCCGATGATCCAA
GCAGAAGCTTATGTAGTTCGCGGGCGCCCGCATTGTCTGCATATCTGATC
AGCTCCTGTATAACGCTGACCCCTTGGGCAGAATGCCAGCACCTCTCGAA
TACGCGCAGTAACGTCGATAGGCTGCCCACCACTGTCAAAGTCAGCCGAT
ACTGCTTCGGCGCCGGCATCCTGGCCTGCCGCATGCCAAATTGGGCTCTG
TTTTCATGTATGTCCTCAAGCTGCCCCCCTAGGTCATGTTCCCCCCTGTG
TGTGTGCTCCTCTCGCCATGCCCTTTGTCTTTCTGACTGCTGGCTCCGTG
TCCCGGCGGCACCTGAATGTACATTCTCAGATGTCATTCTGGCACCCATT
GCCAAGCTCGTGAGGCCACCATCCTCTCCAGGCAATGTACAGCTCGCATA
CAGTTCTTGACAAAGGCCAGGCCAGCCGTTTTCCGTGAGAAGGTGGCTGG
AGCCAGCAAGCTTAGTGCATGGGTGGCCGCAAAGAAGCGGGCAAATGTGA
TGGTGGAGCGCCATCTATGTTCAAGTATATGGAGAAAATAAGGGTGGGGT
ACATCAACGTTTGAGTCACTCTAGCTTATCTGACGACATCATGAACTGCC
GGGCCTGAAACAAAGCAGCATGCTTCACAGCAGTTTCAGACTTGAAAACA
ACAACTTGAAAATGATTGCTCGGAAGTGACTCGCACAACAACAGTTGAGT
TCAGAATGCACTCTGACTGATCAGCAGGCGCTGGCAGTAGGTTGTCTTCA
GCCAATGAAGCTATCAAAATAGCTTTCTTCGTCGAGGAGGAAGGCAAGCA
ACAGCGTGCTGGATAGTATTCATGACACGAAAAAGGGTTGGGCAGCATCT
TGTGAGGGTTGGAAAACTCATACAACTCGCCCCATGGGCTTGAAGAGGTA
ATACAGTATGATTGTGTAAGTCATTATGCAGCTTATGGGGGCATGCGCTG
GGCCTGATGATGCTGCTTGGATGTCCGATTTGCAGACTATCAGATCATTC
TAGTTTGAGGATACTGAACTCGAACGCTGGCCATTCTTCAAGTTCACAAC
TGATGCTATGCAGGCCCAAGAGCCTCAGAAGTCCCAAGGTTATGTCTAAA
GTATTTCATTGGCATGGCTTCGCCTTGTGCTCATTGTAGCTCATACGTGG
CTGCTCCTCCCACTTGGTGTGTCCAGATTTTCGTGCATCGGCACCGACCA
AAGAATTAGAGCAGCACCGCTCAGAGACAGTCGAGGAAGGGGGGCACCCG
CCCCAAGAGGCACTGGATGAAGTGACGCCACCTGATCCAGAAACTTCAAC
AGTTGAAGTGATGCACAGCCCCGCTCTGGCGGTGCGATTTGACTTCAGCA
GCAGCGGCGGCAGCAGCGGCAACGGCAGCAGCAGCAGCAGCGGTGGCAGC
AGCAGCGGCGGCAGCAGTAGCGGCAGCGGCAGCGGCGGACTTGACGCGAA
CAGCGGCGCGCTGCAGCTGTGCATGGCGCTGGCCGACGAGGGGCTGCTGC
AGGTGCTCGTCACCTTTGCATCAGCTGCTCAGTTCTACAATAGCGTTGAT
GAAGTGATGCTCCAGTCACCAGCATTGGCGGATGGCGGCAGCGGCAGCGG
CGCTGGCATCAACGCAGGCACTGGCGATGGCGGCGGCGGCGGCAGCAACG
ATAACGGCAGCAGCAGCACCTATGGCAGCAGCAGCAGCAGCGGTAACGGC
GCCTCCAAGCACATACTCCTGCTGAGGACCCATCACACGAGCGCGCGCTT
TGCTGAGCAGCTGACGCGCTCTGCGCTGAGCGATGCCAGCATGGAGCCCA
CGGCGCGCGCAGTCAGACTGGCTGCGGGGCTTTCGTGCGGCGACTATGAT
ATCCTTGCGGCGCTGCTGCCAGGAGCAATGTCGAGCGCTGCTGCAGGTAG
TGAGGGGCAAGCAGTTGACGCTGGGCCGAACGCCAGCCTGCCTCGCGAAG
GTGATATTGAAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAACT
GCTGGGTTTGAAGATGTTGCTGGCAGCGGCGCTGTGATTGAGGGCAACAG
TGACGGCGGCAGCGGCAGCAGTACTGCGCCGGGCGTCCAACACGTTGGTG
ATGGTGATGATGATGGCAGCAGCTTTGACAGCATTAGCAGCAATACCCAG
AGCAACACCCAGAGCAACATCATCAGTGCAAGCGGCGCACACGGCAGCAT
CGACCACCAAGCCCTGCAGCAGGCGCCGTATGACTTGCATGCGGCAGCCA
GCGCCATCGTTGAAGAGAGGCGCCAGCAGCTGCTGCGCGAGTGGGGTTTG
CTGCTACCAGCGGAGCCATCACGACAGTTACAGCCTGATCAGCCGCCACC
ACCACAGCATTACGTGCCGCTGTGGGAGGTGCTGGGCCAGCTGAGTCTGC
CGCAGGAGCAAGGCAACGCTCAGCAGCAGCAGCAGCAGCAGCGCAGCGCA
GCCGCCGTGCCAGAGCTCCTCGCTACATGCTCCGTGACCGGCAATCAGCT
GCACCAGATGGTCCGTGACGGTTGGCTGGACGTGGTGCCAGACTCAGACT
CACTGTGGGGACAAGTCACAGTCCGCATTCCCGCATTCTGGCGGCGACCG
CAGGCGGCAGGAGATGGGGAGGGTACCGCTGACGGCGCAGCACGCGCGCC
TCACACTCATGAGCTGCTGCTGCCGCTGCAGGCGACGCTGCTCGAGCGCG
CTCAGCTCACTACGCTGGACAACTGCCTGCTGACGCCAGCGCCGCTGACG
CGCGTCGCGTTCAGGCAAATGTGCAGTGACGCCGGCGGCGGCGACAGCGG
CGGCGCCGACAACAGTGGCGGCAGCGGCGGCAGCGGCAGCGGTGGCGGCT
GCAGTAGCAGCAGTGCAGTAGCAGGGCGGTACATCCAGACGTGCCTGGAG
CTGGCGCACATCAGGCGTGAGGTTGCCCTGCTGGAGCGCGACAGAGGGGA
GCTGGGGCGGTGGTGGCACGCTATTGGGCAGGTGCGCGCGGAGTTTAGGG
GGCGGCGCGAGGGGCTGGAGGAGGCACAGTGGACGCTGGCGCAGCTGGAG
CTTATACGGCAGGAGCGGCAGGCGGCCGTGTTGGCCAACGAGGTGAGGGT
TAGGGTTAGTGCAGTGCCCAGTGCTTCAGGGGGTAGGTTTAGGGGTAGGG
CAAGGCGATCAGGGCTCAGCGGGGGGTCTTAGGGGGTTGTTTCAGGGTGT
GCACAATCTAATTAGTTGCGTGGTGTCGGGCTCGTGCGTTGACGAGCAAT
CTCGTCGAGACTCAAAAGAGGGCACACGAAAGGGCAGATGCACGGTGACA
TGTGCACCGGACGCATGCCGCAGCTGCTTACACTGGGCGGGTGCTGAGCA
CTGCGCGATGTGATCAAAACAACCGTTGCGGTGCGTGCGCTGCACGTGAG
CATGCTGATGTGAGCGTGCCATGCGAGGCCGCTTGAGGTTTGATGCACGC
TGAAGTTGGCGGTTTATGGTGGTGCAGCTCGGAATACATGGCGCACGATG
CATGTAGTATGCCTTTTTCAGCTGGAAGGCATGTGCACTTCGAGCATCCC
AATGAAACACGCTCTCACGTGGGGACTTGACAATAATGCCTCATTTCAGA
AGTGCTATCAGTTGTGGCGATTGTTGAAGTATACATGGGTTGCCTGACAA
CATACCCCCATGGCTGACCCCGCAAGCAGGCAAGGAGCAGAGCCAGAAGA
CTGCAAGCGCAAGCCACCGACACCATCACTGCCTTTCAACGCGACATTGC
GTCGGCAGTAGACGCGGCAGCGGCAGCAGCGGCAGCAGCAGAAAAAGCCT
TCAACGCAGAAACTCAGACGTATCAACACCTGCAGCTGCCATCGGTAGCG
ACAGCCAGCGGGGTGGAAGAGGCTGTAATCGCCGACATAGAAGCGGGCAC
CAGGATGCGCCCCGAGCCGTTCAACACTGAGTGTGTTGAGTGTGAGGGTA
GTGGGGAGAGCAGTGCTGCACAGGGGGG

Coding sequence (CDS) from alignment at Contig_47:282523..287400-

>mRNA_6217 ID=mRNA_6217|Name=jgi.p|Trimin1|349692|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2301bp|location=Sequence derived from alignment at Contig_47:282523..287400- (Tribonema minus UTEX_B_3156 )
ATGGAGCGCGGGCGGCGCAGCTTGGGCTTGCCGCTGCTGTACGAGGGCCT
GGCACTGCTGACATACAGCAGCGCAGCAATTGAAGATGGGGATCTGGAGG
GAGGAGAGGCAGCGAACCTCCACAAGCACCGCTCAGAGACAGTCGAGGAA
GGGGGGCACCCGCCCCAAGAGGCACTGGATGAAGTGACGCCACCTGATCC
AGAAACTTCAACAGTTGAAGTGATGCACAGCCCCGCTCTGGCGGTGCGAT
TTGACTTCAGCAGCAGCGGCGGCAGCAGCGGCAACGGCAGCAGCAGCAGC
AGCGGTGGCAGCAGCAGCGGCGGCAGCAGTAGCGGCAGCGGCAGCGGCGG
ACTTGACGCGAACAGCGGCGCGCTGCAGCTGTGCATGGCGCTGGCCGACG
AGGGGCTGCTGCAGGTGCTCGTCACCTTTGCATCAGCTGCTCAGTTCTAC
AATAGCGTTGATGAAGTGATGCTCCAGTCACCAGCATTGGCGGATGGCGG
CAGCGGCAGCGGCGCTGGCATCAACGCAGGCACTGGCGATGGCGGCGGCG
GCGGCAGCAACGATAACGGCAGCAGCAGCACCTATGGCAGCAGCAGCAGC
AGCGGTAACGGCGCCTCCAAGCACATACTCCTGCTGAGGACCCATCACAC
GAGCGCGCGCTTTGCTGAGCAGCTGACGCGCTCTGCGCTGAGCGATGCCA
GCATGGAGCCCACGGCGCGCGCAGTCAGACTGGCTGCGGGGCTTTCGTGC
GGCGACTATGATATCCTTGCGGCGCTGCTGCCAGGAGCAATGTCGAGCGC
TGCTGCAGGTAGTGAGGGGCAAGCAGTTGACGCTGGGCCGAACGCCAGCC
TGCCTCGCGAAGGTGATATTGAAGCAGCAGCGGCAGCAGCAGCAGCAGCA
GCAGCAGCAACTGCTGGGTTTGAAGATGTTGCTGGCAGCGGCGCTGTGAT
TGAGGGCAACAGTGACGGCGGCAGCGGCAGCAGTACTGCGCCGGGCGTCC
AACACGTTGGTGATGGTGATGATGATGGCAGCAGCTTTGACAGCATTAGC
AGCAATACCCAGAGCAACACCCAGAGCAACATCATCAGTGCAAGCGGCGC
ACACGGCAGCATCGACCACCAAGCCCTGCAGCAGGCGCCGTATGACTTGC
ATGCGGCAGCCAGCGCCATCGTTGAAGAGAGGCGCCAGCAGCTGCTGCGC
GAGTGGGGTTTGCTGCTACCAGCGGAGCCATCACGACAGTTACAGCCTGA
TCAGCCGCCACCACCACAGCATTACGTGCCGCTGTGGGAGGTGCTGGGCC
AGCTGAGTCTGCCGCAGGAGCAAGGCAACGCTCAGCAGCAGCAGCAGCAG
CAGCGCAGCGCAGCCGCCGTGCCAGAGCTCCTCGCTACATGCTCCGTGAC
CGGCAATCAGCTGCACCAGATGGTCCGTGACGGTTGGCTGGACGTGGTGC
CAGACTCAGACTCACTGTGGGGACAAGTCACAGTCCGCATTCCCGCATTC
TGGCGGCGACCGCAGGCGGCAGGAGATGGGGAGGGTACCGCTGACGGCGC
AGCACGCGCGCCTCACACTCATGAGCTGCTGCTGCCGCTGCAGGCGACGC
TGCTCGAGCGCGCTCAGCTCACTACGCTGGACAACTGCCTGCTGACGCCA
GCGCCGCTGACGCGCGTCGCGTTCAGGCAAATGTGCAGTGACGCCGGCGG
CGGCGACAGCGGCGGCGCCGACAACAGTGGCGGCAGCGGCGGCAGCGGCA
GCGGTGGCGGCTGCAGTAGCAGCAGTGCAGTAGCAGGGCGGTACATCCAG
ACGTGCCTGGAGCTGGCGCACATCAGGCGTGAGGTTGCCCTGCTGGAGCG
CGACAGAGGGGAGCTGGGGCGGTGGTGGCACGCTATTGGGCAGGTGCGCG
CGGAGTTTAGGGGGCGGCGCGAGGGGCTGGAGGAGGCACAGTGGACGCTG
GCGCAGCTGGAGCTTATACGGCAGGAGCGGCAGGCGGCCGTGTTGGCCAA
CGAGGCAAGGAGCAGAGCCAGAAGACTGCAAGCGCAAGCCACCGACACCA
TCACTGCCTTTCAACGCGACATTGCGTCGGCAGTAGACGCGGCAGCGGCA
GCAGCGGCAGCAGCAGAAAAAGCCTTCAACGCAGAAACTCAGACGTATCA
ACACCTGCAGCTGCCATCGGTAGCGACAGCCAGCGGGGTGGAAGAGGCTG
TAATCGCCGACATAGAAGCGGGCACCAGGATGCGCCCCGAGCCGTTCAAC
ACTGAGTGTGTTGAGTGTGAGGGTAGTGGGGAGAGCAGTGCTGCACAGGG
G