mRNA_6202 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|166924
Unique Name	mRNA_6202
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: A0A836CBD3_9STRA (Guanyl nucleotide exchange factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD3_9STRA)

HSP 1 Score: 1164 bits (3011), Expect = 0.000e+0
Identity = 599/599 (100.00%), Postives = 599/599 (100.00%), Query Frame = 1

Query:    1 MAKKGRMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRGDTTLPPNGIGLSAAPSPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQVR 1797
            MAKKGRMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRGDTTLPPNGIGLSAAPSPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQVR
Sbjct:    1 MAKKGRMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRGDTTLPPNGIGLSAAPSPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQVR 599

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: D7FVN6_ECTSI (Guanyl nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVN6_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 1.920e-191
Identity = 309/599 (51.59%), Postives = 386/599 (64.44%), Query Frame = 1

Query:    1 MAKKGRMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRGDTTLPPNGIGLSAAPSPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLD--ERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQ 1791
            M +KG+  M KSLRLE+E MW PL EI+AEDAA  +A+ EA    +Y + E  Y +WR  +A  R D          S   +P     Q+ L G+TERA    +PR   A VAI+AGANH LL+HR+GQLY+WG+G SGRLGLD+S GG PQADA  A+ I   + RPV R SAG++HS+A+   G++YTWGS ATGKLG+G  + + Y + P RV++   +   VK +SCGAAHTA VT  G L++WGC DGGRLGL     G   + P LVESL    +R+  VSCG++HTL  TAV E  EG GE     K +RGGRVY AGS + LG    AF P   L+ + V+ VSAG+ HS   T +GELYTWGSNR GC G P  T F   P  V  LY  P+NLA G  +RQSSV++   A  A +G+  G     C+CTQQD Q WWEVDLG    +  V++WNR DEP DPS   + YA+RLFPCWVM S+ P+ +  GG AL  A+  + AR     ++RC  WR PDQT ARYVR+QL+GF+FLH+AQVEV GT GARRSPG+V H  AG+YVT  V+ A+ D  DVE  YKRAVQ
Sbjct:    1 MYEKGKNVMGKSLRLEIEEMWAPLREIQAEDAAIKKANEEAGLGSQYARGEHVYSQWRERMAKARDDA---------SPVFTPRGNSLQVNLGGITERAAEMRSPRANDAAVAISAGANHVLLVHRSGQLYTWGVGASGRLGLDLSQGGNPQADAAAATVIQAFSGRPVLRASAGYNHSSAITTSGRVYTWGSAATGKLGLGMVDRDVYCSVPTRVMV--DSPTKVKEISCGAAHTACVTASGHLFIWGCGDGGRLGLGEERLGPQ-YEPVLVESLATGGQRIGAVSCGNSHTLALTAVREAHEGEGEGRA--KALRGGRVYQAGSTNVLGTFCPAFKPTMGLDEVMVKQVSAGYGHSCCCTMDGELYTWGSNRDGCLGLPRSTKFANFPQLVTCLYVSPKNLAMGRPSRQSSVYDGLSAGMAVDGDRSGDHYRKCSCTQQDPQGWWEVDLGQLVHVHQVKIWNRCDEPKDPSMERNFYAKRLFPCWVMASQEPFKDDVGGAALLDAMNTAVARAHFKEEQRCLVWRCPDQTMARYVRVQLQGFDFLHMAQVEVFGTTGARRSPGKVTHCCAGKYVTTAVMAAMQDSADVETVYKRAVQ 585

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: A0A8J2SRF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRF7_9STRA)

HSP 1 Score: 450 bits (1158), Expect = 1.050e-140
Identity = 262/601 (43.59%), Postives = 352/601 (58.57%), Query Frame = 1

Query:   16 RMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRGDTTLPPNGIGLSAAPSPNRIDRQLALM----GLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIG--ACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAI-WVPTLVESLLD--ERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAA-LEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAV 1788
            R+ +AK L +++  MW PL EI+AE+ A+ R   +    +   K E  Y+ WR  +                + A SP R  R  +++    G+T R  G    +G  A+  IA GA H   +H++G LY+WGLG  GRLGLD++  G P+ADA R + +  LA+ PV   + G+SH A V     LY WGS A+GKLG+G  A E E Y + P  + L    +  ++ +SCGAAHTAA T +G+L+VWGC DGGRLGL     G A  W P  V++L +   R+  VSCG+AHTL  T + E + G+G + +  K  +GG+V+AAGSAS LG    AF  +   L  +     SAG AHS V+T EGELY WG N  GCC       F+A P   A +Y RP NLA G  ARQSS +   +A  A +G   G     CT TQQD QAWWEVDLG  A +  V++WNR+DEP D +   D Y+ RL PCW+M S+ PY++  GG +L  AL QS AR ++T  +RC+TW +P+  SARY+R+QLEGFNFLH AQ+EV G  G + S GR    V G++ T  ++R L DP D+   YKRA+
Sbjct:  567 RVALAKRLVVDITKMWAPLREIQAEEDARDRQKKQTEVVENIAKREHAYEAWRQQVKEA-------------AEATSPERTARGNSIVIESGGITARGAGHKIAQGYAAIKQIAGGAQHFAAVHQSGALYTWGLGSGGRLGLDITENGDPRADATRPTVVQALASTPVLTTACGYSHMACVTTSRDLYVWGSAASGKLGLGLAAKEEECYASLPVHLPLRPKNRPLLRTVSCGAAHTAATTTDGELFVWGCGDGGRLGLGR--EGLATHWSPRRVDALFEAGHRIGDVSCGNAHTLAVTLIEEVWTGTGTNRMKEK--QGGQVFAAGSASVLGLFHPAFDRVMGELASVQAVQASAGFAHSGVVTSEGELYCWGMNDDGCCAAHPKVRFLAEPTLAACIYSRPGNLALGRPARQSSCYGGQDAHVAVDGNCDGSSPELCTSTQQDPQAWWEVDLGDFANLHIVKLWNRTDEPPDQTMARDKYSSRLVPCWIMASQKPYSDEVGGSSLINALGQSVARHQITRDKRCTTWHVPENISARYIRVQLEGFNFLHFAQLEVFGIIGVQGSVGRCSRVVCGKHCTVAIIRPLSDPADINRVYKRAI 1150

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: A0A482S3L9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3L9_9ARCH)

HSP 1 Score: 438 bits (1127), Expect = 4.330e-136
Identity = 260/592 (43.92%), Postives = 350/592 (59.12%), Query Frame = 1

Query:   49 VESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRG--DTTLPPNGIGLSAAPSPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGAC--EGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAA---------LEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRA 1785
            ++ MW PL E++AE  A   A   + + +   K E  YQ WR  +   R   D +  P G  L            + L G T RA    TPRG  A + I+AGA H  L+H+TGQLY+WG+G SGRLGLD++  G PQAD  + + +  +  RPV R+S G+SH+  + +GG++Y WGS ATGK G+G      E Y + P ++++G   +R V+++SCGAAH+A +T  GQL+V+GC DGGRLGL      G  +VPTLVE LL E++  VSCG+A T+V T + + + G  +     + V GGR+Y AG+++ LG+    F  I            + + ++ VSAG+ H+AV++ EGEL+ WG NR GCCG P+   FV  P  V  +Y RP NL+ G  A QSS +N  EA+ A +G+  G G   CT T Q+AQ W E+DLG  A ID + VWNR+D+P D +   DLY  RLFPCWVMV R P+  G    +LK +L  +  + +LT  +R STWR P     RYVRIQLE +N L +AQVEV G  G  R  GR  +  AGR VT  VVR   DP DVE AYKRA
Sbjct:  458 IDEMWAPLREVQAETQALTIAKKTSTQHELQVKREENYQEWRGRVQNKRETMDASFTPRGQSLD-----------IKLQGATPRAADLSTPRGFEAGLQISAGAAHTCLVHKTGQLYTWGVGTSGRLGLDMTEKGDPQADVAQPTLVQGIMDRPVIRVSCGYSHTGVIVSGGEVYMWGSAATGKCGLGEIVQSEECYCSIPTKIMVGVEDKR-VRKISCGAAHSAVITEMGQLYVFGCGDGGRLGLG-YNRFGTCYVPTLVECLLHEKILSVSCGNATTIVCTEINKVWVGDMDDKY--RKVSGGRLYVAGASNVLGKQYDIFTRIHIDSDETDSNDADDVVIKQVSAGYMHTAVVSAEGELFCWGHNRNGCCGVPVVQQFVDRPTPVRFMYTRPVNLSVGKKAYQSSTYNRREAKYAVDGKKDGVGVLQCTSTHQEAQPWIEIDLGKIAVIDKIVVWNRTDKPTDRNLPHDLYTARLFPCWVMVGRDPFPTGANVISLKESLRLAVCKAKLTEDKRVSTWRCPSNAQGRYVRIQLERYNTLSVAQVEVFGYWGYSRGVGRCSYVCAGRDVTVAVVRPSHDPRDVEFAYKRA 1034

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: A0A6G0XXD3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXD3_9STRA)

HSP 1 Score: 334 bits (857), Expect = 6.600e-98
Identity = 204/502 (40.64%), Postives = 275/502 (54.78%), Query Frame = 1

Query:  244 SPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPD-QTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRAL 1746
            +P      + L G+T R     +PRG  AV  I+AG N+A  +   G LYSWG+GISGRLG   ++ G   AD  R + +  L +  +  ++  F HSAA+   GQ+Y WGS +TGKLGIG  + +    A   V L     R V+++SCG AHT AVT +G++++WGC +GGRLGL        + VPT V+SL   RVA +SCG+ H+ V T +    + + E++       GG VY  GSA  L      ++ +  L GL V+ V  G  H+A +T  GELYTWG N   C GHP     +  P  + A +  P NLA    ARQSSVFN  +A+RA +G   G     C  TQ D   WWEVDLG  + I+ ++VWNR+D+P D S   D Y  RLFP W++VS  P+++  G + LKA      A    T   R + W LP   T  RY+RI ++G  +LHLAQVEV G   A    GRV      + VT VV+R L
Sbjct:  779 TPRNSSLIIELNGVTSRGPPLHSPRGASAVWKISAGENYACAVTHNGSLYSWGVGISGRLGQGTTMEGTINADFDRPTRVLALKSTYIQDIACAFDHSAAITVDGQVYVWGSTSTGKLGIGPQDAKYEQFAIYPVRLNFPRHRRVRQISCGRAHTGAVTTDGEVFMWGCANGGRLGLGENVQD-EVTVPTFVKSLAHVRVARISCGNCHSAVCTDIQSTMDNTIETLT------GGDVYMCGSAGPLLHYTPTWSIVQKLRGLPVKEVCCGFGHTAAVTYFGELYTWGQNIDECTGHPADRRVIQEPELLRAFHVAPYNLALRKPARQSSVFNEQDADRAVDGNKSGQ-LHTCNHTQFDDHPWWEVDLGQPSVIERIKVWNRTDQPTDTSRRRDEYTSRLFPFWILVSEVPFSDAVGREGLKAGRGHCNASAEFTQDVRVTEWVLPTTSTVGRYIRIHVKGSRYLHLAQVEVFGVYNAFNYVGRVSSVHCAKNVTLVVMRPL 1272

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: W4H9F4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9F4_9STRA)

HSP 1 Score: 334 bits (857), Expect = 2.470e-97
Identity = 206/517 (39.85%), Postives = 285/517 (55.13%), Query Frame = 1

Query:  244 SPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQ-TSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQ 1791
            +P      + L G+T R      PRG  AV  IAAG ++A  + + G LYSWG+GISGRLG   SL G   ADA   S +  L +  V  ++  F HSAAV+  G +Y+WGS +TGKLG+G  +      A   +L+    ++  +++SCG AHT AV+ +G L++WGC +GGRLGL        + VPTLV SL    VA VSCG++H+ + T +  + +G+ E+      + GG VY  GS+  L      ++ ++ L G  VR V  G  H+A +T  GELYTWG N   C GH      + AP  + A +  P NLA G  ARQSSV+N  +A+ A +G   G     C  TQ D   WWEVDLG  + ++ ++VWNR+D+P D S   D +  RLFP W++VS  P+ +  G  +LKA  AQS A  +     R + W LP   T  RY+RIQ++G  +LHLAQV+V G   A    G V      + VT VV+R LP        Y +A+Q
Sbjct:  792 TPRSTSTVIDLNGVTSRGPPLHPPRGSSAVWKIAAGESYACAVSQNGSLYSWGVGISGRLGHGKSLEGIINADADHPSRVMALQSVFVKDVACAFDHSAAVSVDGHVYSWGSASTGKLGVGLLDDSYEQFAMYPMLVPFPNRKRFRQVSCGRAHTGAVSTDGDLYMWGCANGGRLGLGERVQDMVV-VPTLVVSLARVLVAQVSCGNSHSALTTEIRVDVDGNVET------ISGGDVYVCGSSGPLMHFTPTWSIVSKLRGTPVRDVCCGFGHTAAVTLSGELYTWGQNTNECTGHAADRRVIEAPELLRAFHVAPYNLAVGKRARQSSVYNQQDADLAVDGNRSGT-LHTCMHTQYDDHPWWEVDLGQASVLERIKVWNRTDQPVDTSRRRDEFTSRLFPFWILVSEVPFDDSVGSASLKAGRAQSNASAQFADNHRLTEWVLPSTGTVGRYIRIQVKGKRYLHLAQVDVFGVYNAFNYVGHVSTVQCAKNVTLVVMRPLPSATSTHDHYLKAIQ 1300

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: A0A024UUX4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUX4_9STRA)

HSP 1 Score: 333 bits (854), Expect = 6.670e-97
Identity = 211/519 (40.66%), Postives = 287/519 (55.30%), Query Frame = 1

Query:  244 SPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEG--EAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPDQ-TSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQ 1791
            +P      + L G+T R      PRG  AV  IAAG + A  +   G LYSWG+GISGRLG   SL G   AD+   S +  L +  V  ++  F HSAA++A GQ+YTWGS +TGKLG+G  +   E +   P RV   G  ++ ++++SCG AHT AV+ +G+L+VWGC +GGRLGL        + VPT V SL    VA VSCG++H+ + T +  + +G+ E++       GG VY  GS+  L +    ++ +A L G  VR VS G  H+A  T  GEL+TWG N   C GH  G   +  P  V A +  P NLA    ARQSSV+N  +A  A +G   G     C  TQ D   WWEVDLG  + ++ ++VWNR+D+P D S   D + RRLFP W+MVS  P+ +  G  +LKA    S A  + T   R + W LP   T  RY+RIQ++G  +LH+AQVEV G   A    G V      + VT VV+R L     +   Y +A+Q
Sbjct:  795 TPRSTSTVMELNGVTARGPPLHPPRGSSAVWKIAAGESFACAVTHNGSLYSWGVGISGRLGHGKSLEGMMNADSDHPSRVMELKSVFVQDVACAFDHSAALSADGQVYTWGSASTGKLGVGLLDDKFEQFAMHPMRVRFPG--RKRLRQVSCGRAHTGAVSTDGELFVWGCANGGRLGLGEQVQD-MVAVPTFVASLSRVSVAQVSCGNSHSALCTEIRSDVDGNVETL------SGGDVYVCGSSGPLLQHTPTWSLVAKLRGTPVREVSCGFGHTAAATLAGELFTWGQNVQECTGHAAGRRVIDEPELVRAFHVAPYNLAIRKRARQSSVYNEQDAALAVDGNRSGP-LHTCIHTQYDDHPWWEVDLGQPSVLERIKVWNRTDQPVDTSRRRDEFTRRLFPFWIMVSEVPFDDTMGRASLKAGRDHSNASAQFTEDHRLTEWVLPSTGTVGRYIRIQVKGKRYLHVAQVEVFGVYNAFNYVGHVSSVQCAKNVTLVVMRPLSSATSIHDHYIKAIQ 1303

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BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: A0A2P4XEF6_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XEF6_9STRA)

HSP 1 Score: 320 bits (820), Expect = 7.290e-96
Identity = 204/527 (38.71%), Postives = 288/527 (54.65%), Query Frame = 1

Query:  250 NRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAAR--------PVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGE--AYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVAL--VSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPD-QTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQ 1791
            +RID    + G+T R     +PRG  AV  ++AG +H  LL + G LY+ G+G SGRLGL  +  G    D+   + I     R         V ++S  FSHSAA+ + G LYTWGS   GKLG+G  E E   Y   P  V   G  +R ++ +SCGA+HT AVT  G+L++WG  +GGRLGL P      I VPTLV  L++++V +  VSCG+AH+   T V  E+    + +L      GG VY  G A+AL     ++  +  L+ +A+R V+ G++H+A ++  GELYTWG N  GC GH     F+  P  +  L+  P NLA G   RQ +++N      A NGE GG   A C  T  +   WWEVDLG  A I+ +R+WNR+DEP +PS     Y+ RLFPCW+ VS   + +  G + L+AA  QS A     + +R + W LP   T  ++VR+QL+  NFLH A++EV G   A +  G+V         T VV+  +     ++  Y RA+Q
Sbjct:  150 SRID----ISGITTRGPPLHSPRGAVAVANVSAGGSHVALLMQDGSLYTCGVGTSGRLGLQSNHRGATCFDSNHPNRIEAFNVRVASLSEDISVRQVSCSFSHSAAIDSDGSLYTWGSACNGKLGVGIVEDEYKQYSLTPLLVKFPG--KRKIRHVSCGASHTGAVTTAGELFMWGSANGGRLGLGPHVID-TIVVPTLVRDLVNKKVRVWQVSCGTAHSAFCTEVTSEYSEGSKKLL------GGHVYVCGGATALSRYMLSWERVPELDSVAIRQVACGNSHTAAVSSYGELYTWGRNFHGCTGHDANRIFIDKPELLKCLHVEPYNLALGRPCRQITIYNEQGPHLAVNGEKGGT-LATCIHTHLEDSPWWEVDLGQPAVIEKIRLWNRTDEPLNPSKNRSEYSNRLFPCWIFVSEFAFKDLEGKEGLRAAKVQSSAFELFRSNKRMTEWVLPTANTVGQFVRVQLQNRNFLHFAELEVFGVYSAFKYVGKVGTVQCSADATLVVMPPISTQSVLDDFYLRAIQ 662

[Close]

BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: A0A6A5AIQ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIQ6_9STRA)

HSP 1 Score: 318 bits (815), Expect = 8.100e-96
Identity = 200/507 (39.45%), Postives = 277/507 (54.64%), Query Frame = 1

Query:  313 PRG--VGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLP------------DQTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQ 1791
            PRG  V AV  IAAG ++   + + G LYSWG+GISGRLG   SL G   ADA   S +  L +  V  ++  F HSAAV+  G +Y+WGS +TGKLG+G  +      A   +L+    ++  +++SCG AHT AV+ +G L++WGC +GGRLGL        + VPTLV SL    VA VSCG++H+ + T +  + +G+ E+      + GG VY  GS+  L      ++ ++ L G  VR V  G  H+A +T  GELYTWG N   C GH      + AP  + A +  P NLA G  ARQSSV+N  +A+ A +G   G     C  TQ D   WWEVDLG  + ++ ++VWNR+D+P D S   D +  RLFP W++VS  P+ +  G  +LKA  AQS A  +     R + W LP            D +   Y+RIQ++G  +LHLAQV+V G   A    G V      + VT VV+R LP        Y +A+Q
Sbjct:   99 PRGSSVLAVWKIAAGESYVCAVSQNGSLYSWGVGISGRLGHGKSLEGIINADADHPSRVMALQSVFVKDVACAFDHSAAVSVDGHVYSWGSASTGKLGVGLLDDSFEQFAMYPMLVPFPNRKRFRQVSCGRAHTGAVSTDGDLYMWGCANGGRLGLGERVQDMVV-VPTLVVSLARVLVAQVSCGNSHSALTTEIRVDVDGNVET------ISGGDVYVCGSSGPLMHFTPTWSIVSKLRGTPVRDVCCGFGHTAAVTLSGELYTWGQNTNECTGHAADRRVIEAPELLRAFHVAPYNLAVGKRARQSSVYNQQDADLAVDGNRSGT-LHTCMHTQYDDHPWWEVDLGQASVLERIKVWNRTDQPVDTSRRRDEFTSRLFPFWILVSEVPFDDSVGSASLKAGRAQSNASAQFADNHRLTEWVLPSTGTVGRCVCRYDVSRIWYIRIQVKGKRYLHLAQVDVFGVYNAFNYVGHVSTVQCAKNVTLVVMRPLPSATSTHDHYLKAIQ 597

[Close]

BLAST of jgi.p|Trimin1|166924 vs. uniprot
Match: D0NE78_PHYIT (Regulator of chromosome condensation (RCC1), putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NE78_PHYIT)

HSP 1 Score: 315 bits (808), Expect = 7.830e-95
Identity = 199/521 (38.20%), Postives = 295/521 (56.62%), Query Frame = 1

Query:  265 QLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQA---DAPRASPIPTLAARPVT--RMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGE--AYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESLLDERVAL--VSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTA--FVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGDALKAALAQSQARVRLTAQRRCSTWRLPD-QTSARYVRIQLEGFNFLHLAQVEVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQ 1791
            ++ + G+T R     +PRG+ AV +++AG +H  L+ + G LY+ G+G SGRLGL + +GG+ +    + P+     T+ AR ++  ++S  FSHSAA+ + G LYTWGS  TGKLG+G  E E   Y   P  V   G  +R ++ +SCG +HT AV+  G+L++WG  +GGRLGL        + VPTLV  L+ +R+ +  VSCG+AH+ + T V  E  G  + +L      GG+VY  G A+AL     ++  I  L+ + +R V+ G +H+A ++  GEL+TWG N  GC GH    +  F+  P  +  L+  P NLA G   RQ +++N      A NGETGG   A C  T  + + WWEVDLG  A I+ +R+WNR+DEP +PS     Y+ RLFPCW+ VS   + +  G + L+AA  QS A       +R + W LP   T  +++R+QL+  +FLH A+VEV G   A +  G+V         T VV+  +     ++  Y RAVQ
Sbjct:  151 RIEMSGITTRGPPLHSPRGLVAVASVSAGGSHVALVMQDGSLYTCGIGTSGRLGLQL-IGGKTRCYDTNHPQRVEAFTVRARNLSLRQVSCSFSHSAAIDSDGSLYTWGSACTGKLGVGIVEDEYKQYSLTPLLVKFPG--KRTIRSVSCGPSHTGAVSTAGELFMWGSANGGRLGLGQ-HMNDTVVVPTLVRELVKKRIRVWQVSCGTAHSALCTEVTSECTGGSKKLL------GGQVYVCGGATALSRFVLSWERIPELDDVGIRQVACGGSHTAAVSSYGELFTWGRNFHGCTGHDASVSRVFIEKPELLRCLHVEPYNLALGKPCRQINIYNEQGPHLAVNGETGG-ALATCIHTHMEDKPWWEVDLGQPAVIEKIRLWNRTDEPLNPSKNRSEYSNRLFPCWIFVSEFAFQDLDGNEGLRAAKIQSSAFELFRTNKRMTEWVLPTANTVGQFIRVQLQNKSFLHFAEVEVFGVYSAFKYVGKVGTVQCSTDATMVVMPPISTQSVLDDYYLRAVQ 660

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|166924 vs. uniprot

BLAST of jgi.p|Trimin1|166924 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CBD3_9STRA	0.000e+0	100.00	Guanyl nucleotide exchange factor n=1 Tax=Tribonem...	[more]
D7FVN6_ECTSI	1.920e-191	51.59	Guanyl nucleotide exchange factor n=1 Tax=Ectocarp...	[more]
A0A8J2SRF7_9STRA	1.050e-140	43.59	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
A0A482S3L9_9ARCH	4.330e-136	43.92	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A6G0XXD3_9STRA	6.600e-98	40.64	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
W4H9F4_9STRA	2.470e-97	39.85	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A024UUX4_9STRA	6.670e-97	40.66	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A2P4XEF6_9STRA	7.290e-96	38.71	Regulator of chromosome condensation (RCC1) n=1 Ta...	[more]
A0A6A5AIQ6_9STRA	8.100e-96	39.45	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
D0NE78_PHYIT	7.830e-95	38.20	Regulator of chromosome condensation (RCC1), putat...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_47	contig	Contig_47:197476..202941 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|166924\|e_gw1.47.229.1
BRITE	ko00000,ko00001,ko01000,ko04121
KEGG Pathway	ko04120,map04120
KEGG ko	ko:K10594
EC	2.3.2.26
GOs	GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0008150,GO:0012505,GO:0016020,GO:0019899,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0051020,GO:0065007,GO:0065009,GO:0098772
Preferred name	HERC1
Description	guanyl-nucleotide exchange factor activity
COG category	DZ
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5184@1\|root,KOG1426@2759\|Eukaryota
Evalue	3.14e-192
Seed ortholog	2880.D7FVN6
Hectar predicted targeting category	other localisation
TranscriptId	167246
Track	FilteredModels1
ProteinId	166924

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|166924	gene_6202	Tribonema minus UTEX_B_3156	gene	Contig_47 197476..202941 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|166924	Trimin1\|166924\|e_gw1.47.229.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_47 197476..202941 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6202_7	exon_6202_7	Tribonema minus UTEX_B_3156	exon	Contig_47 197476..197716 -
exon_6202_6	exon_6202_6	Tribonema minus UTEX_B_3156	exon	Contig_47 197963..198242 -
exon_6202_5	exon_6202_5	Tribonema minus UTEX_B_3156	exon	Contig_47 198811..199160 -
exon_6202_4	exon_6202_4	Tribonema minus UTEX_B_3156	exon	Contig_47 200465..200648 -
exon_6202_3	exon_6202_3	Tribonema minus UTEX_B_3156	exon	Contig_47 201480..201825 -
exon_6202_2	exon_6202_2	Tribonema minus UTEX_B_3156	exon	Contig_47 202156..202506 -
exon_6202_1	exon_6202_1	Tribonema minus UTEX_B_3156	exon	Contig_47 202894..202941 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6202	CDS_6202	Tribonema minus UTEX_B_3156	CDS	Contig_47 202894..202941 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_47:197476..202941-
coding sequence from alignment at Contig_47:197476..202941-

spliced messenger RNA

>mRNA_6202 ID=mRNA_6202|Name=jgi.p|Trimin1|166924|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1800bp|location=Sequence derived from alignment at Contig_47:197476..202941- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCAAGAAGGGCAGGATGACCATGGCCAAGAGCCTGCGCCTGGAGGT
GGAGTCCATGTGGCGTCCGCTCATGGAGATAGAGGCGGAAGACGCGGCCA
AGCACCGCGCCGACGGCGAAGCCGCGCGCGAAAAGGAGTACTTCAAGGCC
GAAGCCGAATACCAGCGCTGGCGCACGGCCATTGCCGCCGGCCGCGGCGA
CACCACGCTGCCGCCGAATGGCATCGGGCTGAGCGCTGCCCCCAGCCCCA
ACAGGATTGATCGGCAGCTGGCGCTGATGGGGCTGACGGAGAGGGCGGGG
GGGAGCGTCACGCCCAGGGGGGTGGGGGCCGTGGTGGCGATAGCCGCGGG
GGCAAACCACGCGCTGCTACTGCACCGCACGGGGCAGCTGTACTCATGGG
GCCTGGGCATCAGCGGCCGCCTCGGCCTGGACGTGTCCCTGGGGGGTCAA
CCCCAGGCGGACGCCCCCCGCGCCTCCCCCATACCTACCCTAGCAGCGCG
CCCCGTCACGCGCATGAGCGCCGGCTTCAGCCACAGCGCAGCGGTGGCGG
CGGGCGGCCAGCTGTACACGTGGGGCAGCGGCGCCACCGGCAAGCTGGGC
ATAGGGGCGTGCGAGGGGGAGGCGTACGTGGCGGCGCCCGCGCGCGTGCT
GCTGGGCGGCAGCGCTCAGCGCCCGGTGAAGCGCCTCAGCTGCGGCGCCG
CGCACACGGCGGCGGTGACGGGGGAGGGGCAGCTATGGGTCTGGGGGTGC
ACAGACGGGGGGCGCCTGGGGCTCTCCCCCTTGCCCCCGGGGGGTGCCAT
CTGGGTACCCACCCTGGTCGAATCGCTGTTGGATGAGAGGGTGGCACTGG
TCAGCTGTGGCAGCGCTCACACGCTGGTGGCCACTGCAGTCGTAGAAGAG
TTTGAGGGGTCAGGTGAGAGCATGCTGCTGCTCAAGATTGTGCGCGGCGG
GCGCGTGTACGCCGCCGGCTCCGCGTCAGCGCTCGGCGAACTCCAGCGCG
CCTTTGCGCCCATAGCCGCGCTCGAGGGCCTAGCCGTGCGCCACGTCTCA
GCGGGCCACGCACACAGCGCAGTCATCACCGGCGAGGGGGAGCTGTACAC
GTGGGGGAGCAACAGGGGGGGGTGCTGCGGGCACCCCCTGGGGACGGCCT
TTGTGGCAGCGCCCGCGTGCGTTGCGGCGCTGTACCAGAGGCCGCAAAAT
CTGGCGCGCGGGTGCACTGCGCGGCAGAGCAGCGTGTTCAACAACTGCGA
GGCGGAGCGCGCGACGAATGGGGAGACGGGCGGGCACGGCGCCGCGGCGT
GCACGTGCACGCAGCAGGACGCGCAGGCGTGGTGGGAAGTGGACCTCGGC
AGCGAGGCGCGCATCGACACGGTGCGCGTGTGGAACCGCAGCGACGAGCC
CGATGACCCCTCCTTCGGCGCTGATCTGTATGCGCGGCGCCTGTTCCCGT
GCTGGGTCATGGTGTCGCGCACGCCGTACGCGGAGGGGACGGGGGGGGAC
GCGCTCAAGGCGGCGCTGGCGCAGTCGCAGGCGCGCGTGAGGCTCACGGC
GCAGCGGAGATGCTCAACCTGGCGGTTACCCGACCAGACCAGCGCGCGCT
ACGTGCGCATACAGCTCGAGGGCTTCAACTTCCTGCACCTGGCGCAGGTT
GAAGTTCTGGGCACCAAGGGCGCGCGCCGCAGCCCCGGGCGCGTGTGCCA
CGCTGTTGCGGGGCGCTACGTGACGGCGGTCGTTGTGCGTGCGCTGCCCG
ATCCCGAGGATGTGGAGGTGGCGTACAAGCGCGCTGTGCAGGTGAGGTGA

protein sequence of jgi.p|Trimin1|166924

>Trimin1|166924|e_gw1.47.229.1 ID=Trimin1|166924|e_gw1.47.229.1|Name=jgi.p|Trimin1|166924|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=600bp
MAKKGRMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKA
EAEYQRWRTAIAAGRGDTTLPPNGIGLSAAPSPNRIDRQLALMGLTERAG
GSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQ
PQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLG
IGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGC
TDGGRLGLSPLPPGGAIWVPTLVESLLDERVALVSCGSAHTLVATAVVEE
FEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVS
AGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQN
LARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLG
SEARIDTVRVWNRSDEPDDPSFGADLYARRLFPCWVMVSRTPYAEGTGGD
ALKAALAQSQARVRLTAQRRCSTWRLPDQTSARYVRIQLEGFNFLHLAQV
EVLGTKGARRSPGRVCHAVAGRYVTAVVVRALPDPEDVEVAYKRAVQVR*

mRNA from alignment at Contig_47:197476..202941-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6202 ID=mRNA_6202|Name=jgi.p|Trimin1|166924|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5466bp|location=Sequence derived from alignment at Contig_47:197476..202941- (Tribonema minus UTEX_B_3156 )
ATGGCCAAGAAGGGCAGGATGACCATGGCCAAGAGCCTGCGCCTGGAGGT
GGGTCTCTTTTGTGGCACGTCACCTGTTGCAGTTTGTCGTGAGTGCACGT
TGGAAGTCATAGCTAAGAGCCTGGAGGCGGGTCTGTTTGTGGCACGTCAC
ATGCGTCGTTTGCTTTCAAATGCATGATACAAGTGTGTTGTTGCGACACT
GAGTTATAGCATACTGGGGGGGGGGGGCAAGAGCGCTAGAAGGGGTGTAG
CACGGCCGTTGTGTGAGCTGCTGCAACACAGCGCACCTGAACAATGCGAC
TCCGCTGCATACATGTTTGCATGTAGGTATGTATGTATGCGCCAGCTCAC
GCCCACAGCTCACAACTTCGCACTCATGCGGCCCTACTGAAGTACATATA
CTTGCACGTCCTGCCCGCCTCACGCCACCTGGCAGGTGGAGTCCATGTGG
CGTCCGCTCATGGAGATAGAGGCGGAAGACGCGGCCAAGCACCGCGCCGA
CGGCGAAGCCGCGCGCGAAAAGGAGTACTTCAAGGCCGAAGCCGAATACC
AGCGCTGGCGCACGGCCATTGCCGCCGGCCGCGGCGACACCACGCTGCCG
CCGAATGGCATCGGGCTGAGCGCTGCCCCCAGCCCCAACAGGATTGATCG
GCAGCTGGCGCTGATGGGGCTGACGGAGAGGGCGGGGGGGAGCGTCACGC
CCAGGGGGGTGGGGGCCGTGGTGGCGATAGCCGCGGGGGCAAACCACGCG
CTGCTACTGCACCGCACGGGGCAGCTGTACTCATGGGTATGTGTCTGATA
AAAGTATGCAATGCACTTGAGTTCATGAATCTTTGGTGTTCATCTCAACG
CAGCCGCGGAGGCGAATCACGCGCTGCTGCTGCTGCGCGCACGGGGCAGC
TGTACTCCTGGGTACGTGTCTGATTCAATACTGATGGGTACGGCAATCGG
GCTTATGAGCTCATGAAACAGGATGCTTCATCTTAGTGCCTGGAGCGATC
GCCGCAGCAGTGCTCATCATGACCTTGATCATGACCTCATCAAGTGAACC
TCATGCGACACCTTTGACTTACACACACAATAACCTCATCTTCAACTATC
ACTTCCCTTCCTATAGGGCCTGGGCATCAGCGGCCGCCTCGGCCTGGACG
TGTCCCTGGGGGGTCAACCCCAGGCGGACGCCCCCCGCGCCTCCCCCATA
CCTACCCTAGCAGCGCGCCCCGTCACGCGCATGAGCGCCGGCTTCAGCCA
CAGCGCAGCGGTGGCGGCGGGCGGCCAGCTGTACACGTGGGGCAGCGGCG
CCACCGGCAAGCTGGGCATAGGGGCGTGCGAGGGGGAGGCGTACGTGGCG
GCGCCCGCGCGCGTGCTGCTGGGCGGCAGCGCTCAGCGCCCGGTGAAGCG
CCTCAGCTGCGGCGCCGCGCACACGGCGGCGGTGACGGGGGAGGGGCAGC
TATGGGTCTGGGGTGAGTGACACTTCGCTCTCATATCAAAGCTAACTGTA
TTTTCACGTGAGCTTTAACCTTATTCAAGTAGTGGCAGCGTTCAGCTACA
AATAAAGAGCCTCAGCTGCGGCGCTGCGCACACCGCGGCAGTGACGGGGG
AGGGGCAGCTCTGAGTTTGGGGGCAGTGACACTTCGCTCGCATGCCAAAG
CCAACTACTTCTATACTATTCAAGTGAGCTTAATCCTTATTCAAATGGCG
GTCGCGCGGGTGTGGCAGTGGTCAGCAACAAATGAAGCGCCTCAGCTGCG
GCGCTGCGCACACAGTGGCAGTCACAGGGGGAGGGGCAGTTCTGGGTCTG
CTGTGAGTGACGCTTAAGTTAACACGACCGATGGAAAAGATTACGGGGAG
CGGGTGACACTCTGTCGAGTGCCGAAGAAAGGGTAGGACTTGTTCTGCAT
CCAGTCAGGGCGAGGCCAGTGATGGGGACACCAGCGGGCAACCTAATGAG
ATCTCACCAACGCTTAACATAATCACATCACATTGGTGTATGGTCACACC
TAGGTTGTTTACAACAGCAGACTAGCCTGCCTGTAGGCAGATTGCTAAGG
GTTAGGGTTAGGGTTAGGGTTAGGGCTGTGGAGCTCAACCGCAACCTCTG
AGAATGATGATGCCATGCTTGCTCTACTACCAACACGCAGCATACGCATG
CGCATCTACACAGACACGCACACATACACGTATTCATACATGCGCGCATA
CTACACACAGACACACATGCATGCACACACACATGCATGCGTACACAACA
AACTCAGCGATCATGTCTAACCTAACCCTGCTCGCGTTGCCAGGGTGCAC
AGACGGGGGGCGCCTGGGGCTCTCCCCCTTGCCCCCGGGGGGTGCCATCT
GGGTACCCACCCTGGTCGAATCGCTGTTGGATGAGAGGGTGGCACTGGTC
AGCTGTGGCAGCGCTCACACGCTGGTGGCCACTGCAGTCGTAGAAGAGTT
TGAGGGGTCAGGTGAGAGCATGCTGCTGTGGATTGGTAGGTGGTGAGCAA
GATTGCCAAACCGCATGGCGGTGTTGAGTGCAGAAACAAATGTTGTCAGA
ATTGCCCGCTGGCCATCTTCAGCAAAACTTGAAGTTATGATTGAGACTGG
AACTGTCATACGGTTGAAGGTCGTGCAAGTAGCTGGGAAGTGGTGAAGGC
ATACATAGCTGATACTTGGCCATATGACACTTGCTGTCTATGGTCGATGC
TGCAGTGTCACATGGATAGGTTGAGCAATGTGGCCAGTGGTAGTCTTCCG
CTGCCGCATAGCACTGCCGTCGGTAAGCAAGCTATACTACTTTATGATGT
TGTTGCTGTGACTCCTCACTCACAGTTCATGCCTGGTCCATTTGCACTCA
TAAAGTTGAGGTTTTTCCTCAGCACTTGAGTGCAGTTCAAGTGCTCAGCG
TCCATGGTAGTACATTGATTGCACCACAAAATGGGGGGTGATCATGGAGT
GTAGGGCCTAAGGTCCGCTGCTGTAGTGCCCATGAAGGCGTGCTCATGCT
CCTTATTCGCCAATGCCTGCTTTGCCTGCACGTCAGTTCTCTCTGCGCTC
AGACTTCAAGTTGTTGGAGCGTCACCTTTCCCCCCCGCCCCTCATTTCTT
GCCTAATGGGCTTGAGCTCCTTTGACTTTTCATTGCCCTTGTGCAGTCAT
TCACAGCGTCCAGACAACAGGCCTTCAATTGCCTTCTCAGCGTATCAACA
GCACTTTTGATATCAACAACACCTCCCGCTCCACTTGAAACACTCGCAGA
CCCCTGAGTCTAGGCTGCTTGCATAGCCACGCACACGCAGCCCCTCGCTC
GCGATGAACAGCACGTCGTGGTGCCACCGTGGCGTCACACCCCCTCTTGA
CATGCTCGCCTTCCTCCGTGTCTCCCTGGTCCACACACACGTGGCAGCCG
GCTGTGTATACACCTCAAGCTCCACATGTATACACCTATGCTGACCTACC
TCTGCATACACTCAAACCCAATCCAACCCATCCCATCGCTCGTACGCGCG
CCAGACCCCCACAGGCTGAAGGTCGTGCGTGGCGTATGCCGCACACTCCC
CATATATACACCTACTCTGATACCTCTGCATACATTCGTACATTCAAAAT
TAACCCATCCCAAACTTGACGTGCACGGCAGGCCCCGACAGGCTCAAAGT
CGTGCGTGGCAGCCGGCTGCATAAACGCCGCGGGCGCCAAATATACACAC
CTACTTGACATACCCATGTAGAAGTATGCATATTAAGATTCTTAACACAA
CCCATCCTACTGCTTGCACAGGCCCCGACAGGCTCAAGATTGTGCGCGGC
GGGCGCGTGTACGCCGCCGGCTCCGCGTCAGCGCTCGGCGAACTCCAGCG
CGCCTTTGCGCCCATAGCCGCGCTCGAGGGCCTAGCCGTGCGCCACGTCT
CAGCGGGCCACGCACACAGCGCAGTCATCACCGGCGAGGGGGAGCTGTAC
ACGTGGGGGAGCAACAGGGGGGGGTGCTGCGGGCACCCCCTGGGGACGGC
CTTTGTGGCAGCGCCCGCGTGCGTTGCGGCGCTGTACCAGAGGCCGCAAA
ATCTGGCGCGCGGGTGCACTGCGCGGCAGAGCAGCGTGTTCAACAACTGC
GAGGCGGAGCGCGCGACGAATGGGGAGACGGGTGAGTCATGCAGTTGAGG
TTGTGTAGGTGAAGTAGATCAGGGGGGTGAAGTGACAGTTATTGAAGATA
GTCTTGTGGAAGCTGGCACGGAACGCATGCAGTGGTGCTCTCAACACTGT
GTGCTCTAAGCACACACAGGCATACATACCCGCCCATACTCATGAGTGGG
TGGATGGATTGCTATGAAGCTGCCGCCTCTCTCCTGGCTGCTGAATCCGT
CCAGTGCTCTGCAACAATGCAACGTGAACATATGCAATTTCAGCAACTCT
AGCATGTGTGTTCTGGTAGTATGTGGCTTACAGGGACATGCTTTATCTCA
TGCAATCTACGCCACTCCGAGGACCCGCGTGACCGTCGCTTTCCGAAGGA
AACCGTGCGCTGCATGCCATGTCCTGCAACTGAAACTGCCAGGCGGGCAC
GGCGCCACAGCCTGCACGTGCACGCGCCAGCGGTGGTGGACGAGAGGGTA
TGCATGTTTCTTCATCTCATGCCGTCTTTGCCGCTATGAGGATCCACACC
CCGCCGCTGTCTCAACGATGCCACACACTGCAAACTCTGTGAATGCCAGG
CGGGCACGGCGCCGCGGCGTGCACGTGCACGCAGCAGGACGCGCAGGCGT
GGTGGGAAGTGGACCTCGGCAGCGAGGCGCGCATCGACACGGTGCGCGTG
TGGAACCGCAGCGACGAGCCCGATGACCCCTCCTTCGGCGCTGATCTGTA
TGCGCGGCGCCTGTTCCCGTGCTGGGTCATGGTGTCGCGCACGCCGTACG
CGGAGGGGACGGGGGGGGACGCGCTCAAGGCGGCGCTGGCGCAGTCGCAG
GCGCGCGTGAGGCTCACGGCGCAGCGGAGGTATGTATGTATGGTGCCTGT
TTGACAGCTTGAAGGTGTATGTACTGGCATGTATGCTCGTGGTGACATGC
AGCGCGCACTGTAGGCAGCGACTGGGGGAAATCCTACAGTACTTTCAGAA
CCTGCTAGATCTCTTGTACTGGAGCAGATGATGATGTACTTGGGGGTCAC
TACCCGTTTGTACTGCATGCTGCATGTAATGTACATACGGCTCAACACAC
GCCCAATTCACTCCCCGCTCCGCAGATGCTCAACCTGGCGGTTACCCGAC
CAGACCAGCGCGCGCTACGTGCGCATACAGCTCGAGGGCTTCAACTTCCT
GCACCTGGCGCAGGTTGAAGTTCTGGGCACCAAGGGCGCGCGCCGCAGCC
CCGGGCGCGTGTGCCACGCTGTTGCGGGGCGCTACGTGACGGCGGTCGTT
GTGCGTGCGCTGCCCGATCCCGAGGATGTGGAGGTGGCGTACAAGCGCGC
TGTGCAGGTGAGGTGA

Coding sequence (CDS) from alignment at Contig_47:197476..202941-

>mRNA_6202 ID=mRNA_6202|Name=jgi.p|Trimin1|166924|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1800bp|location=Sequence derived from alignment at Contig_47:197476..202941- (Tribonema minus UTEX_B_3156 )
ATGGCCAAGAAGGGCAGGATGACCATGGCCAAGAGCCTGCGCCTGGAGGT
GGAGTCCATGTGGCGTCCGCTCATGGAGATAGAGGCGGAAGACGCGGCCA
AGCACCGCGCCGACGGCGAAGCCGCGCGCGAAAAGGAGTACTTCAAGGCC
GAAGCCGAATACCAGCGCTGGCGCACGGCCATTGCCGCCGGCCGCGGCGA
CACCACGCTGCCGCCGAATGGCATCGGGCTGAGCGCTGCCCCCAGCCCCA
ACAGGATTGATCGGCAGCTGGCGCTGATGGGGCTGACGGAGAGGGCGGGG
GGGAGCGTCACGCCCAGGGGGGTGGGGGCCGTGGTGGCGATAGCCGCGGG
GGCAAACCACGCGCTGCTACTGCACCGCACGGGGCAGCTGTACTCATGGG
GCCTGGGCATCAGCGGCCGCCTCGGCCTGGACGTGTCCCTGGGGGGTCAA
CCCCAGGCGGACGCCCCCCGCGCCTCCCCCATACCTACCCTAGCAGCGCG
CCCCGTCACGCGCATGAGCGCCGGCTTCAGCCACAGCGCAGCGGTGGCGG
CGGGCGGCCAGCTGTACACGTGGGGCAGCGGCGCCACCGGCAAGCTGGGC
ATAGGGGCGTGCGAGGGGGAGGCGTACGTGGCGGCGCCCGCGCGCGTGCT
GCTGGGCGGCAGCGCTCAGCGCCCGGTGAAGCGCCTCAGCTGCGGCGCCG
CGCACACGGCGGCGGTGACGGGGGAGGGGCAGCTATGGGTCTGGGGGTGC
ACAGACGGGGGGCGCCTGGGGCTCTCCCCCTTGCCCCCGGGGGGTGCCAT
CTGGGTACCCACCCTGGTCGAATCGCTGTTGGATGAGAGGGTGGCACTGG
TCAGCTGTGGCAGCGCTCACACGCTGGTGGCCACTGCAGTCGTAGAAGAG
TTTGAGGGGTCAGGTGAGAGCATGCTGCTGCTCAAGATTGTGCGCGGCGG
GCGCGTGTACGCCGCCGGCTCCGCGTCAGCGCTCGGCGAACTCCAGCGCG
CCTTTGCGCCCATAGCCGCGCTCGAGGGCCTAGCCGTGCGCCACGTCTCA
GCGGGCCACGCACACAGCGCAGTCATCACCGGCGAGGGGGAGCTGTACAC
GTGGGGGAGCAACAGGGGGGGGTGCTGCGGGCACCCCCTGGGGACGGCCT
TTGTGGCAGCGCCCGCGTGCGTTGCGGCGCTGTACCAGAGGCCGCAAAAT
CTGGCGCGCGGGTGCACTGCGCGGCAGAGCAGCGTGTTCAACAACTGCGA
GGCGGAGCGCGCGACGAATGGGGAGACGGGCGGGCACGGCGCCGCGGCGT
GCACGTGCACGCAGCAGGACGCGCAGGCGTGGTGGGAAGTGGACCTCGGC
AGCGAGGCGCGCATCGACACGGTGCGCGTGTGGAACCGCAGCGACGAGCC
CGATGACCCCTCCTTCGGCGCTGATCTGTATGCGCGGCGCCTGTTCCCGT
GCTGGGTCATGGTGTCGCGCACGCCGTACGCGGAGGGGACGGGGGGGGAC
GCGCTCAAGGCGGCGCTGGCGCAGTCGCAGGCGCGCGTGAGGCTCACGGC
GCAGCGGAGATGCTCAACCTGGCGGTTACCCGACCAGACCAGCGCGCGCT
ACGTGCGCATACAGCTCGAGGGCTTCAACTTCCTGCACCTGGCGCAGGTT
GAAGTTCTGGGCACCAAGGGCGCGCGCCGCAGCCCCGGGCGCGTGTGCCA
CGCTGTTGCGGGGCGCTACGTGACGGCGGTCGTTGTGCGTGCGCTGCCCG
ATCCCGAGGATGTGGAGGTGGCGTACAAGCGCGCTGTGCAGGTGAGGTGA