mRNA_6199 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835YU43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU43_9STRA) HSP 1 Score: 891 bits (2302), Expect = 0.000e+0 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 1 Query: 1 MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALPEHVGATAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDKACRDGSSVDIDHHDQCQCPEDAEELVG 1299 MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALPEHVGATAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDKACRDGSSVDIDHHDQCQCPEDAEELVG Sbjct: 1 MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALPEHVGATAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDKACRDGSSVDIDHHDQCQCPEDAEELVG 433
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835YS04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS04_9STRA) HSP 1 Score: 616 bits (1589), Expect = 3.840e-218 Identity = 321/468 (68.59%), Postives = 355/468 (75.85%), Query Frame = 1 Query: 25 RLLLLAAFAVLRALAHDGPDLDVWAAD-------------LSHAPDSASANSALPEHVGATAAARSGH--SAAQVPHWYHTRDTIA--GDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHA-IRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV---------------------------DKACRDGSSVDIDHHDQCQCPEDAEEL 1293 +LLLLAA +L GPDLDV A + +S P +A+ +S L A A SGH S AQVPHWYH+ DTIA DSARLRFTAEVQ DIWRHQNPPTCEG+RY+ETP+H FGLGS+LNRASG LGFAMN+G+IMLYHE+LG+PNFLGSYCAGVLNP+CIFMPPSNCTAYAR+PRN V + DHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYF+RLNARTSQE+I RR+RSAA GAAPLPLPP+TI+VHVRHGDK +EMKLASW H AR DRLA ++G +E FIYLSTDDP VVHAAH +R+ Y VFSLPCP LMDG GVLPCRTN TSANPG D+ E G HA +IALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV + C+DGS VD H DQCQCPEDAEE Sbjct: 9 QLLLLAALTLLCVPTDSGPDLDVRATNSDLDFRATGLPYTISITPHAAT-SSGLAGSEPAAATESSGHTGSDAQVPHWYHSHDTIAPADGDSARLRFTAEVQQDIWRHQNPPTCEGQRYMETPHHGFGLGSILNRASGMLGFAMNKGVIMLYHEKLGAPNFLGSYCAGVLNPACIFMPPSNCTAYARNPRNNVTVEKNYLDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFTRLNARTSQELITRRMRSAASGAAPLPLPPNTISVHVRHGDKRSEMKLASWNAHLARADRLAHKQGFSERFIYLSTDDPKVVHAAHMPLRDPLYSVFSLPCPELMDGLGVLPCRTNITSANPGLDVAEHGAHAGEIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVVGSSKSCCLPYGNVSCDLPVSLRPLPERETCQDGSPVDTHHPDQCQCPEDAEEF 475
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835Z6Q9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q9_9STRA) HSP 1 Score: 301 bits (771), Expect = 2.320e-93 Identity = 169/356 (47.47%), Postives = 211/356 (59.27%), Query Frame = 1 Query: 169 AAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRW-AETDMSSSG--MVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNE--HFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDG-THADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212 AAAR+ S +P WY ++G RL T EVQ DIWR QNPP+C GR + P +GL + L+ A+G+LG AM G + +H G+ F G YC AG NPSC+ MPP+NCT +A V+I +Y +P KW R+ AE S ++ L YWWRAQ A Y RLN RTS E+ RR SAARG+APLPLP D +VHVRHGDK EM L SW H AR RG+ E +YL+TDDP VV +A A + + LPCP DGA +LPCRT + NP +D +G HAD+I LF++E L++ALEATHFVGQRGSSW LID LR + Sbjct: 176 AAARAIDSEDTIPPWYQPNFRLSGAPHTRLPLTEEVQDDIWRSQNPPSCAGRALVLHPPSDYGLSAELHWAAGSLGMAMEHGHLFSWHAATGASAFTGHYCDAAGAHNPSCLLMPPTNCTDHAAAVAAGVEIVPYKAGQNY---TIPTKWRNRFEAEVPPGSPWRKVMTLNYWWRAQVATYLFRLNERTSHELTQRRRASAARGSAPLPLPLDAFSVHVRHGDKWKEMTLQSWDAHEGAARDAARARGVPESRRAVYLTTDDPTVVESARATP--GWTTYVLPCPVAADGA-LLPCRTTDNTTNPAFDAGTEGHMHADEITLFSLEGLMVALEATHFVGQRGSSWTVLIDNLRQTL 525
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CJ51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ51_9STRA) HSP 1 Score: 294 bits (753), Expect = 5.720e-93 Identity = 164/348 (47.13%), Postives = 208/348 (59.77%), Query Frame = 1 Query: 202 VPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSG----MVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGL--NEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGY---DMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212 +P WY ++G RL T EVQ DIWR QNPP C G + FGL + L+ A+G+LG AM G I +H G+ F+G YC AGV NPSC F+PPSNC+ A V + H+Y +P K+ E++M ++ L YWWRAQ A Y R N RTS+E+I RR RSAARGA PLPLPP+T ++HVRHGDK EM L SW H D AR RG+ ++ F+YL+TDDP VV +A A + V+ LPCP DG+ LPCRT + NP + D E+ AD+I LFA+E L++ALEATHFVGQRGSSW LID+LR + Sbjct: 15 LPPWYQPYFRLSGTPQTRLPLTEEVQADIWRSQNPPACAGHALVVHRRSNFGLSAQLHWAAGSLGMAMEHGHIFTWHAASGTKAFMGRYCDEAGVHNPSCFFVPPSNCSDQAAAAGAAVVPYAV---HNY---TIPSKF-----ESEMPPGSPWRKVMTLNYWWRAQVATYLFRFNKRTSRELIQRRQRSAARGAPPLPLPPNTFSIHVRHGDKWKEMNLQSWDAHLHAADVAARARGVPASQRFVYLTTDDPRVVESALATH--GWTVYVLPCPLQADGS-PLPCRTTDNTTNPAFGISDSEQGHADADEIMLFALEGLMIALEATHFVGQRGSSWTVLIDDLRHTL 348
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CN48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN48_9STRA) HSP 1 Score: 269 bits (688), Expect = 7.340e-84 Identity = 157/335 (46.87%), Postives = 199/335 (59.40%), Query Frame = 1 Query: 238 GDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLET-PYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCA-GVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVV-------PDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANP-GYDMEEDGTHA-DQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMV 1209 G ARL FT EVQ+DIW+HQNP +CEG++YL+ P++ GLGSLL+ A+ L AM Q I++YH + G+ GS+CA N C FMP SNC+AY D S+ P+P+V P+KW QRWAET ++ +L YWWRAQA Y +RLN TS+E+I RRL AA G APLPLP DT+++HVRHGDK+ EM L SW++H R D LA R ++LST+DP+VV A A DG C N P D A D + LF++E+LLLALEATHFVG RGS+W RLIDELRM+ Sbjct: 7 GKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVAD----------SNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTA----DLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARA-----------------DGTSASKCLPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRML 310
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835ZAN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN1_9STRA) HSP 1 Score: 268 bits (686), Expect = 6.800e-83 Identity = 154/342 (45.03%), Postives = 203/342 (59.36%), Query Frame = 1 Query: 202 VPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLET-PYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC-AGVLNPSCIFMPPSNCTAYARDPRNK----VKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMV 1209 +P +Y G + AR FTAEVQ DIW+HQNPP+C+GR+YL P+ + GLGSLL+ + + +AM Q I++YH++ G+ GS+C A + +C FMP SNC+AY D K+ D VP KW QRWA+T +L YWWRAQA Y +RLN +TS+E+I+RR AA G PLPLP DT++VHVRHGDK EM L SW++H R D LA+ R +LST+DP+VV AHA + + + LP R N A M E G +D + LF++E+L +ALEATHF+G RGS+W RLIDELRMV Sbjct: 34 LPAFYQPSFRPVGREGARPVFTAEVQADIWQHQNPPSCDGRKYLRLQPHTQGGLGSLLHVTTAAIAYAMQQNAILVYHKDYGATLSHGSFCPAHSRSLNCFFMPLSNCSAYMADAEMPGLPVYKVGRRRLD-------VPKKWRQRWADTRQKG----DLLYWWRAQAVAYVTRLNPQTSRELISRRRAHAAAGTVPLPLPNDTVSVHVRHGDKGAEMALRSWQEHKTRADELAKARRFRGRTAFLSTEDPEVVKEAHA--DGTWDILVLPYR-----------RDNGDFAQ----MAELGV-SDDLVLFSLENLFIALEATHFLGTRGSNWNRLIDELRMV 346
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835YGT7_9STRA (FUT8_N_cat domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT7_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.360e-80 Identity = 147/327 (44.95%), Postives = 200/327 (61.16%), Query Frame = 1 Query: 244 DSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDK 1218 D+ L FT EVQ DIW+HQNPP+CEG+ ++ P H GLGS+L+ A+ LG+A NQ I+++ E G G C AG N C FMP SNC+ + H D Y M V P KW RW +T+ + ++ YWWRAQA Y R N +T++ + RRL+ A +G APLPLPP+T++VHVRHGDK EMK +W++H R + +A+ R L E +Y++T+DP V A ++ F LPCP L+ G L CRT+ T NP + ++D D++ LF+++ LLLALE THFVG RGS+W RLIDELRMV + Sbjct: 90 DNPLLPFTKEVQADIWKHQNPPSCEGQSFIHQPNHPAGLGSVLHVATAGLGYAFNQKSILVFGEYFGQQFGSGRLCDEAGAFNSQCFFMPASNCSTFVNASTVPAVPHKMKD---YEMQV-PQKWRTRWQDTNQTG----DIIYWWRAQAVAYLFRFNEQTAEMLRVRRLQIARQGVAPLPLPPNTVSVHVRHGDKVNEMKTYTWEEHLVRAEDVAKARQLKERHMYVTTEDPAV--ALQVQENPDWTTFILPCPKLI-GGHELNCRTDKTHGNPVF--QDDHMFEDEMVLFSLQGLLLALEGTHFVGVRGSNWTRLIDELRMVYGR 403
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CMT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT9_9STRA) HSP 1 Score: 259 bits (662), Expect = 6.930e-79 Identity = 151/347 (43.52%), Postives = 199/347 (57.35%), Query Frame = 1 Query: 199 QVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLG---SYCAG--VLNPSCIFMPPSNCTAYA--RDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDG--AGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212 ++P WY I+ ++RL FT EVQ DIW HQNP +CE R ++ GLG L+ A+ L +AM G I++ H+ + G SYC+ + C FMP SNC+ + R RN T P+VP KW +RWAET+ + S L WWRAQ Y +RLNART++E+ RRLRSAA GAAPLPLPP TI+VHVRHGDK E++L SW H V+ AR +G E ++++TDD +V A A + + PC A A + CRT T NPGY + A + LF+++ LL ALEATHF GQRGS+W R+ID LRMV+ Sbjct: 52 RLPPWYAPNYRISDAFASRLPFTEEVQADIWAHQNPQSCENRTFVLQGSKPAGLGYLMGVANFPLAWAMEHGHILVLHQGFAAAQAEGEQDSYCSSQQLRGWDCFFMPLSNCSDHIGKRVERNFKWAPTAD-------PLVPAKWQRRWAETNQTGS----LLQWWRAQTTAYATRLNARTARELALRRLRSAAAGAAPLPLPPGTISVHVRHGDKYKELELMSWGDHLGAVNAAARAQGWKERALFVTTDDSEVAAAVRA-GVPGWTAYIQPCEAPYGARCAEQVRCRTTETDVNPGYATSDA---AADLTLFSLQGLLTALEATHFAGQRGSNWVRVIDRLRMVM 383
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835ZC10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC10_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.750e-60 Identity = 118/286 (41.26%), Postives = 164/286 (57.34%), Query Frame = 1 Query: 367 LLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDK 1218 +L+ A+ LG+A NQG I+LY ++ G G C AG N C FMP SNC+A D + + D+ VP KW RW T+ + ++ YWWRAQA Y R N +T++ + ARRL+ A +G APLPLP +T++VHVRHGDK EM SW++H AR +A R L E ++Y++TDD V A ++G L CR+ S + NP + ++D D++ LF+++ LLLALE THFVG RGS+W+RLIDELRMV + Sbjct: 1 MLHVATAGLGYAFNQGSILLYGDDYGKHFGSGRLCDAAGAHNSQCFFMPASNCSATV-DAAAAPAVPQKAWDY---RTQVPQKWRDRWEATNQTG----DIVYWWRAQAVAYLFRFNPQTAEALSARRLQIARQGVAPLPLPLNTVSVHVRHGDKVVEMTTFSWEEHLARAQDVAEARRLAERYMYVTTDDSAVALQAE-----------------LNGGHDLNCRSESATENPAF--QDDHQFEDEMVLFSLQGLLLALEGTHFVGARGSNWSRLIDELRMVYGR 259
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CC71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC71_9STRA) HSP 1 Score: 189 bits (479), Expect = 3.140e-52 Identity = 102/207 (49.28%), Postives = 129/207 (62.32%), Query Frame = 1 Query: 598 VPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVV-HAAHAIRERNYRVFSLPCPALMDGAGV-LPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212 VP KW +RWAET+ + +NL YWWRAQ + Y R NART++E+ RRLR+AA GA PLPLPP T AVHVRHGDK EM L SW+ H A V+ A + E +Y+STDD V A + V LPCP +PCRT + S NPG + ++A + L ++E LL+ALEA HF GQRGS+W RLID LR+V+ Sbjct: 138 VPAKWQRRWAETNQT----MNLLYWWRAQGSAYLLRFNARTARELALRRLRAAASGAVPLPLPPGTAAVHVRHGDKFKEMALMSWRDHLAAVEAAAERERWPERRLYVSTDDAAVAAEVAAPGGVPGWTVHVLPCPEPRKRLPERVPCRTEANSDNPGTARIDGVSYAADLTLVSLEDLLIALEAMHFAGQRGSNWTRLIDRLRLVL 340 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6199 ID=mRNA_6199|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1302bp|location=Sequence derived from alignment at Contig_47:181740..183847- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCACCGCCCCACCTGCGCCTGCGGCTCCTGCTGCTTGCAGCATTTGCback to top protein sequence of jgi.p|Trimin1|349681 >Trimin1|349681|estExt_Genemark1.C_Ctg_470027 ID=Trimin1|349681|estExt_Genemark1.C_Ctg_470027|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=434bp MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALPback to top mRNA from alignment at Contig_47:181740..183847- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6199 ID=mRNA_6199|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2108bp|location=Sequence derived from alignment at Contig_47:181740..183847- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_47:181740..183847- >mRNA_6199 ID=mRNA_6199|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1302bp|location=Sequence derived from alignment at Contig_47:181740..183847- (Tribonema minus UTEX_B_3156 )back to top |