mRNA_6141 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA) HSP 1 Score: 1405 bits (3638), Expect = 0.000e+0 Identity = 850/850 (100.00%), Postives = 850/850 (100.00%), Query Frame = 3
Query: 144 MLDIGVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDRAALEEAYRRVSCSEQNVDADANVRPNLLLSIKFIITALAIRNGHAAAQTDATRVGVQLAMSTGQRTQPFAECEEASLDILRNEAVVHEVGVTEGTLQVKMDDNDVPSARVQGPLLCDRRWAPVQQAALRGDTAPLQRILSAAEARLAEFARTCACDAPPAVVRCAPAACXXXXXXXXXXXXXXXXAPLDVARFVRAFRAVAERTLEHVREDRRGAERAELAALLREAEGVRSGVALDDAGRLATARQALEWLLNKIEEAHTDSLNEQLRAVTAYLRTDGHCHERGLALRRLAAHADPLRATRAFVHRAVRLSADQSRGGCSSVCADVAACTWDDAATRAQACALLDALRREAGAXXXXXXXXXXPEAAADLLVRGVLAGALAATAAARGGAHMPLCEAPETLLLDGPRLQQSAAAVETAAAXXXXXXXXXRGAPGGLGAERTTQLLTLLEAEELTTEHVVAQVSRWAAAAVAPGGARAXXXXEVEGAARAVCERRSPLRDLCLRRCLMAVGDMVAARATKGGAAAVAAAAARGLPGLGDFLSQRAAASLLAIARHSVRVYGGAYAVFTAEAVAQLR 2693
MLDIGVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDRAALEEAYRRVSCSEQNVDADANVRPNLLLSIKFIITALAIRNGHAAAQTDATRVGVQLAMSTGQRTQPFAECEEASLDILRNEAVVHEVGVTEGTLQVKMDDNDVPSARVQGPLLCDRRWAPVQQAALRGDTAPLQRILSAAEARLAEFARTCACDAPPAVVRCAPAACXXXXXXXXXXXXXXXXAPLDVARFVRAFRAVAERTLEHVREDRRGAERAELAALLREAEGVRSGVALDDAGRLATARQALEWLLNKIEEAHTDSLNEQLRAVTAYLRTDGHCHERGLALRRLAAHADPLRATRAFVHRAVRLSADQSRGGCSSVCADVAACTWDDAATRAQACALLDALRREAGAXXXXXXXXXXPEAAADLLVRGVLAGALAATAAARGGAHMPLCEAPETLLLDGPRLQQSAAAVETAAAXXXXXXXXXRGAPGGLGAERTTQLLTLLEAEELTTEHVVAQVSRWAAAAVAPGGARAXXXXEVEGAARAVCERRSPLRDLCLRRCLMAVGDMVAARATKGGAAAVAAAAARGLPGLGDFLSQRAAASLLAIARHSVRVYGGAYAVFTAEAVAQLR
Sbjct: 1 MLDIGVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDRAALEEAYRRVSCSEQNVDADANVRPNLLLSIKFIITALAIRNGHAAAQTDATRVGVQLAMSTGQRTQPFAECEEASLDILRNEAVVHEVGVTEGTLQVKMDDNDVPSARVQGPLLCDRRWAPVQQAALRGDTAPLQRILSAAEARLAEFARTCACDAPPAVVRCAPAACXXXXXXXXXXXXXXXXAPLDVARFVRAFRAVAERTLEHVREDRRGAERAELAALLREAEGVRSGVALDDAGRLATARQALEWLLNKIEEAHTDSLNEQLRAVTAYLRTDGHCHERGLALRRLAAHADPLRATRAFVHRAVRLSADQSRGGCSSVCADVAACTWDDAATRAQACALLDALRREAGAXXXXXXXXXXPEAAADLLVRGVLAGALAATAAARGGAHMPLCEAPETLLLDGPRLQQSAAAVETAAAXXXXXXXXXRGAPGGLGAERTTQLLTLLEAEELTTEHVVAQVSRWAAAAVAPGGARAXXXXEVEGAARAVCERRSPLRDLCLRRCLMAVGDMVAARATKGGAAAVAAAAARGLPGLGDFLSQRAAASLLAIARHSVRVYGGAYAVFTAEAVAQLR 850
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A835Z3F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F5_9STRA) HSP 1 Score: 283 bits (724), Expect = 4.740e-75 Identity = 255/527 (48.39%), Postives = 304/527 (57.69%), Query Frame = 3
Query: 1185 EASLDILRNEAVVHEVGVTEGTLQVKMDDNDVPSARVQG---PLLCDRRWAPVQQAALRGDTAPLQRILSAAEARLAEFARTCACDAPPAVVRCAPAACXXXXXXXXXXXXXXXXAPLDVARFVRAFRAVAERTLEHVREDRRGAERAELAALLREAEG----VRSGVALDDAGRLATARQALEWLLNKIEEAHTDSLNEQLRAVTAYLRTDGHCHERGLALRRLAAHA-------DPLRATRAFVHRAVRLSADQSRGGCSSVCADVAACTWDDAATRAQACALLDALRREAGAXXXXXXXXXXPEAAAD-LLVRGVLAGALAATAAARGGAHMPLCEAPETLLLDGPRLQQSAAAVETAAAXXXXXXXXXRGAPGGLGAERTTQLLTLLEAEELTTEHVVAQVSRWAAAAVAPGGARAXXXXEVEGAAR------AVCERRSPLRDLCLRRCLMAVGDMVA-ARATKGGAAAVAA---AAARGLPGLGDFLSQRAAASLLAIARHSVRVYGGAYAVFTAEAVAQL 2690
++SLD+L NEAVVHEVGVT+G LQVK++ P+A +G P+L D RW PV AAL GDTAPL ++L+AA+ R+ E AR+C C + AV P A XXXXXXXXX V FV AFR V E L R A RA+L L+ A G L + LA AR ALEWLL ++E H +LN+QLRAVTAYLR G HE LA+ RL+ A +PLR TRAFVHRAV A+++ G A ALL ALR P AA L+VRG+L GALAA A+ GA+ P CEAPETLL DG RLQ XXXXXXXXX G+ GGLG ERT QLL+LLEA +LT EHV AQ WA + + G XXXX AAR A+CERRSPLR + LRRCLMAVGDM A AR GG A A A RG+ LG +L+ RAAA LLA+ R+++ VY AY+ F AEA+AQL
Sbjct: 1866 QSSLDVLSNEAVVHEVGVTDGLLQVKVEG--WPAAGEEGKQAPILHDERWGPVAAAALAGDTAPLHQLLTAAQRRMDETARSCNCRSSSAVAVADPNA----PXXXXXXXXXLLDPVTTVGEFVTAFRRVGEGLLRMCSRARCVALRAQLLGFLQLARGGDDRSMEAAPLSNPHVLAAARAALEWLLASVDELHVAALNDQLRAVTAYLRAAGARHELALAIARLSPSAAAATAALNPLRVTRAFVHRAVATVAEEAHGXXX----------XXXXXXXXNAQALLAALRAA----------PQPPFAALTALVVRGILGGALAA-ASTPAGAYPPPCEAPETLLFDGARLQXXXXXXXXXX-XXXXXXXXXTGSSGGLGPERTVQLLSLLEAPDLTAEHVAAQAVHWAGPSCSSGXXXXXXXXXXXXAARLGGMVLAICERRSPLRGVYLRRCLMAVGDMAAEARCCGGGGDAATARVVAERRGIADLGGYLAARAAAPLLAVTRYNMLVYVDAYSTFAAEALAQL 2364
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A835Z5K8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K8_9STRA) HSP 1 Score: 258 bits (659), Expect = 3.540e-72 Identity = 209/474 (44.09%), Postives = 255/474 (53.80%), Query Frame = 3
Query: 1140 AMSTGQRTQPFAECEEASLDILRNEAVVHEVGVTEGTLQVKMDDNDVPSARVQGPLLCDRRWAPVQQAALRGDTAPLQRILSAAEARLAEFARTCACDAPPAVVRCAPAACXXXXXXXXXXXXXXXXAPLDV----ARFVRAFRAVAERTLEHVREDRRGAERAELAALLREAEG---VRSGVALDDAGRLATARQALEWLLNKIEEAHTDSLNEQLRAVTAYLRTDGHCHERGLALRRLAAHADPLRATRAFVHRAVRLSADQSRGGCSSVCADVAACTWDDAATRAQACALLDALRREAGAXXXXXXXXXXPEAAADLLVRGVLAGALAATAAARGGAHMPLCEAPETLLLDGPRLQQSAAAVETAAAXXXXXXXXXRGAPGGLGAERTTQLLTLLEAEELTTEHVVAQVSRWAAAAVAP-GGARAXXXXEVEGAARAVCERRSPLRDLCLRRCLMAVGDMVAARATKGGAA 2537
A +TG + + +A SL++LRNE VVHEVGVT+G LQVK D + Q +L D+RWA ++ A L G+ PL ++++A+ R+ E A C C + AV+ AA APLDV FV AFR VA +RR + EL L+ A G +R G L + L R ALEWLL I++ H D LN QLRA+T YLRT+G HE GLA RLAA LRATR FVHRAV + ++ G S DA +A A ALL ALR A A LLVRGVL G L T A GA CEAPETL+ DG RLQQSAAAVET+A XXXXXXXXX LG + T QLLTLLEA +LT H+ AQ +WA A + V G A+CER+SPLR+L LRRCL+AV M A GG+A
Sbjct: 29 AWATGTKLERYA-----SLEVLRNETVVHEVGVTDGLLQVKADGGAAAGSSQQRTILHDKRWAAIEAATLAGNMEPLAHLIASAQRRVDEVAMPCQCHSGIAVITTTAAAADAHMAGAARMSTADTTAPLDVHFDLPEFVAAFRGVANALSRACHHERRAVIQRELDGFLQLAAGHDAMRLG-GLANVQVLGAVRTALEWLLGTIDQVHRDMLNNQLRAMTTYLRTEGASHESGLAYSRLAAAPYCLRATRHFVHRAVAIVTAEASGASS------------DATLQANATALLSALRASPS---------PSTAAVAGLLVRGVLGGVLVDTKVAGTGACRGPCEAPETLVFDGMRLQQSAAAVETSAXXXXXXXXXXXX-XXXLGPQHTAQLLTLLEAPDLTPAHIAAQAVQWAQGQGAGVSSCSSGTAAHVRGVVMAICERQSPLRELYLRRCLLAVSSMTAESRCCGGSA 474
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE) HSP 1 Score: 184 bits (468), Expect = 4.710e-46 Identity = 121/284 (42.61%), Postives = 145/284 (51.06%), Query Frame = 3
Query: 195 APLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERA-WPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPR-----------------------------AARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFP 956
A L S DAPP +F+ G L+ +RPIYPL+ RLER WPV V AR+ P+ LT F+YN ATAWAA LTLS I S SMEP L+ GDVVLVEKVSR L++ ++V+F PPP L+ V+ AGG L DLFVKRVAAL+GD V V+ DG VR A G LP+ +A + + +GS FVLGDNP S+DSRVWG L IVG LLRVFP
Sbjct: 241 AVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGT-LSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNGGSAAGGESDVILGDGVAGQEGSAAAVAAAKGGTLAEEKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFP 523
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.510e-33 Identity = 107/274 (39.05%), Postives = 139/274 (50.73%), Query Frame = 3
Query: 156 GVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEV---VFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGA-LVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDR 965
GVEYR L I LD + D +L+P+YPL+ +LER WPV V RD+P T YN+ +A+ +L ++L FIPS+SM+P L+ GDV+LV+KVS R+ EV V F+PP L+ VA GG L DLFVKR+AA GD V V +DG+ V G +V G DL A RL+ + FV+GD SVDSRVWG L NIVGRP++R++PLDR
Sbjct: 369 GVEYRILRI------LDRDGRERFTSCPGADY--ELKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGG-NLSSRDLFVKRIAASPGDRVTVYKDGKVDVNGQDVVAGRRDLCEAEPLRLIEKYIEPREDKIIDQK-----------------EVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDR 616
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC) HSP 1 Score: 139 bits (350), Expect = 1.170e-31 Identity = 108/281 (38.43%), Postives = 136/281 (48.40%), Query Frame = 3
Query: 156 GVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLR---RGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVAR-----DGETRVRGALVRG---AGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDR 965
GV+YR I D N D ++ +RP Y L+ +LER WPVT+A +VPI LT YN AT + L +L +IPS SMEP L GDV+LVEKVSR L+R G++V F PP LR V AGG L GDLFVKRVAA GD V V +G T V D P AR+ ++ +G+ +VLGDNP+ SVDSR+WG+L S IVG P++R+FP R
Sbjct: 139 GVDYRVERI-----------DVRANGDPIRDAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSR--LVRPPKNGDIVLFNPPEQLRTFVRQAGG-QLAPGDLFVKRVAATQGDRVTVDNGLPTINGHTYVYPEPEEPPTIGSDAP-PARADGSMQRLAIGRGFAWPYAGEAPSQWVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGR 404
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A7S4C1M9_CHRCT (Mitochondrial inner membrane protease subunit n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1M9_CHRCT) HSP 1 Score: 130 bits (326), Expect = 7.420e-29 Identity = 103/248 (41.53%), Postives = 122/248 (49.19%), Query Frame = 3
Query: 243 GDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRG--ALLRRGEVVFFAPPPALR----AAVADAGGA-PLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDR 965
G +L++RP Y LIP+LER WPV V P +T YN A AL LTLS I S SM P + P DV+LVEKVSR A LRRG++VFF PP LR A A AG A P R G LFVKRV A D V V G + G + GA P + L+ + +G FVLGDN SVDSR WG L ++IVGRP++RVFPL R
Sbjct: 140 GPAILRVRPEYALIPKLERNWPVRVPVSVSPDWMTPSGYNAQVAIFALGLALTGLLGALAASTVLTLSVITSTSMAPTILPRDVLLVEKVSRRFHAPLRRGDLVFFEPPAELREIVRARAAAAGVAEPRRYGRLFVKRVVAAEDDVVGVDDHGHVTLNGGDI-GADVDPNGPLASLVKMQQTLPLA---------------------SGKYFVLGDNADSSVDSRCWGGLDEADIVGRPVVRVFPLSR 365
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: F0YDK1_AURAN (Mitochondrial inner membrane protease subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDK1_AURAN) HSP 1 Score: 133 bits (335), Expect = 9.730e-28 Identity = 105/271 (38.75%), Postives = 131/271 (48.34%), Query Frame = 3
Query: 156 GVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXT-LTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRR----GEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVF 953
GV++ G+T GA VA E L +RP+YPL+PRLER WP T+ VP+AL +Y TA +A+ ++LS +P+RSMEP + PGDV+LVEK S ALLRR GEVV FAPPP LRA A L+VKRVAA+ GD VAV DG V GA + D +R LR+ G FVLGD SVDSRVWG L + + RP+ V+
Sbjct: 1839 GVDFVVAGVTLDGAARFDVAPGAELRSE-----LAVRPLYPLVPRLERPWPATLPEAAVPLALAPASYTALTAASAVGGALAILGSAALAAAVFVSLSVVPTRSMEPGIAPGDVLLVEKTS--ALLRRPPKAGEVVLFAPPPPLRAIAKIADDRA-----LYVKRVAAVAGDVVAVDADGGVAVNGARLPPRPDACDEPDARAALRDVLARARREGLAPEAEFALRK--------GEIFVLGDCADVSVDSRVWGPLDAAAVRARPVATVY 2089
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC) HSP 1 Score: 130 bits (326), Expect = 1.640e-27 Identity = 102/275 (37.09%), Postives = 126/275 (45.82%), Query Frame = 3
Query: 156 GVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRR-----GEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDR 965
GVEYR L I D P +E L+P+YPL+ +LER WPV V RD+P LT YN +A +L ++L IPS SM P L GDVVLV+K++ R G+VVFF PP L+ V + G L DLFVKRVAA GD + V G RV GA P AR EA G VLGD S+DSRVWG LP ++IVGRP++R++P R
Sbjct: 328 GVEYRILRIIDPHTNRDLFYSQPGADYE-------LKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGAT-------PAVARETC---EAEPLRLIEAYLKKASPDNPDGANVRIGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSR 585
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE) HSP 1 Score: 120 bits (301), Expect = 1.280e-26 Identity = 85/238 (35.71%), Postives = 115/238 (48.32%), Query Frame = 3
Query: 261 LRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRR---GEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPLDR 965
L+PIYPL+ +LER WPVTV ++P T YN +A +L ++L FIPSRSM+P L GDVV+VEKVS G+V+ F PP L+ V +GG + DLFVKRVAA V V DG+ + ++ D+ L+ R + FV+GD S+DSRVWG LP I+G+PL RV+P++R
Sbjct: 22 LKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGR-IGNRDLFVKRVAAEPTQKVTVGSDGKVLIDEMELQEKRDMCSEEPLGLIER------------------YIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIER 240 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349575 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6141 ID=mRNA_6141|Name=jgi.p|Trimin1|349575|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3177bp|location=Sequence derived from alignment at Contig_45:781730..787708- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CCCATCACACATGCCCTTCTCATCTGATTGTTCATTTTGTCTTTGTGGGCback to top protein sequence of jgi.p|Trimin1|349575 >Trimin1|349575|estExt_Genemark1.C_Ctg_450102 ID=Trimin1|349575|estExt_Genemark1.C_Ctg_450102|Name=jgi.p|Trimin1|349575|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=851bp MLDIGVEYRCLGITCGGAPLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLback to top mRNA from alignment at Contig_45:781730..787708- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6141 ID=mRNA_6141|Name=jgi.p|Trimin1|349575|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5979bp|location=Sequence derived from alignment at Contig_45:781730..787708- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_45:781730..787708- >mRNA_6141 ID=mRNA_6141|Name=jgi.p|Trimin1|349575|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2553bp|location=Sequence derived from alignment at Contig_45:781730..787708- (Tribonema minus UTEX_B_3156 )back to top |