mRNA_6136 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A835YSX6_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSX6_9STRA) HSP 1 Score: 860 bits (2222), Expect = 7.020e-313 Identity = 469/471 (99.58%), Postives = 469/471 (99.58%), Query Frame = 3
Query: 129 MELQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAAERVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSEANRDTGSSPMGAAVGRPQQGDKPAGESAPALTRPTDQRSAHIAAAPQPSTRRSRAXXXXXHAPSTRFGLTAPSDSRSSASTTSLRRLVEDIYKLDVTGRFREYAAAEDTWCAAVAFLDEDDGAGWAVLQALIGGSGSXXXXXAAGPSTAGAAAQSLSGARAVLAMPFFAAARAAASR 1541
MELQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAAERVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSEANRDTGSSPMGAAVGRPQQGDKPAGESAPALTRPTDQRSAHIAAAPQPSTRRSRAXXXXXHAPSTRFGLTAPSDSRSSASTTSLRRLVEDIYKLDVTGRFREYAAAEDTWCAAVAFLDEDDGAGWAVLQALIGGSGS XXX AAGPSTAGAAAQSLSGARAVLAMPFFAAARAAASR
Sbjct: 1 MELQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAAERVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSEANRDTGSSPMGAAVGRPQQGDKPAGESAPALTRPTDQRSAHIAAAPQPSTRRSRAXXXXXHAPSTRFGLTAPSDSRSSASTTSLRRLVEDIYKLDVTGRFREYAAAEDTWCAAVAFLDEDDGAGWAVLQALIGGSGSGXXXEAAGPSTAGAAAQSLSGARAVLAMPFFAAARAAASR 471
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A6H5L9L5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9L5_9PHAE) HSP 1 Score: 270 bits (691), Expect = 2.900e-81 Identity = 146/301 (48.50%), Postives = 198/301 (65.78%), Query Frame = 3
Query: 111 RRGKLSMEL-QNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAAERVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSE 1010
RR SM L + + +LQ++RF+GE+GF+EITDWEY +P+DPS P RT++ G T RLFEA T +V+LKEF +LA E+ ++ RL +W+ + G P LMGSLVADE+F + RF+E+W++KFP+L P G++WLV++WE L +FASFP AKQE E L D +PT R +RR AF++ MM A A+A +HE+GV HRSLG S R+NT DER P L V L+DF FA+ L + D+ T+RRA+ +SG SP AV+ L REDL LGY FLEL+ + +
Sbjct: 62 RRPATSMSLLRTFEASELQLQRFIGELGFVEITDWEY-NRQTSPVDPSTPSRTLNSSGTTARLFEARTYGNAKVVLKEFLPKGLKLAYREIEINDRLQDAWDQKNGPGGRPPVLALMGSLVADESFKSRRFLEQWVSKFPSLPVPAIGSVWLVYRWEGLYTFASFPPAKQESE-LFDAFNPTARTKRRAAFVKQMMRGATNALAFMHESGVVHRSLGAPSLRVNTLDERYPRQLEVLLSDFGFATRLSEIDDETIRRAS------SSGATSPFAVSDFLFREDLYSLGYVFLELVFGAFCD 354
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A7S4FAY8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAY8_CHRCT) HSP 1 Score: 204 bits (520), Expect = 5.640e-57 Identity = 121/292 (41.44%), Postives = 168/292 (57.53%), Query Frame = 3
Query: 135 LQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAAERVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPS-SVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLS 1007
L+ +AP D IKR +G++GF T+W+Y+GG RNPLDP+ P RTV GA+VRLF+A RVLLKE+ + NELSV+Q + +A D P S ++G + ADE FD+ F +W+ P TPP GN+W VF WE L + A+FP KQ+ + D R+R +L+A+ +++ VA +H G+ HRSLG SS +NT D + +++V+L DF FAS D+ + +A R+ G SPL V S DL LGY FLEL LSSL+
Sbjct: 18 LRVFAPSDFAIKRQIGQLGFATETEWQYYGGKRNPLDPNMPTRTVEASGASVRLFDAELYG-RRVLLKEYLGEAGDIGSNELSVYQHMHS--QAASADEDLPPQISSMLGHMRADEAFDSQAFRTQWLLNLPQSTPPEPGNLWTVFAWEGLQTVAAFPRVKQQKTFFDWNGDAAVAERKR--YLKAVAKESLKGVAFLHGRGIVHRSLGGSSLLLNTYDHFSANSVSVKLTDFGFASVGSQMDQEEVAKALRM------GAASPLQVMSFYALNDLHGLGYVFLELFLSSLA 298
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A7S0F1J5_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1J5_9CRYP) HSP 1 Score: 197 bits (501), Expect = 5.060e-53 Identity = 138/435 (31.72%), Postives = 208/435 (47.82%), Query Frame = 3
Query: 132 ELQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAAE----RVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPT---RRLRRRT--AFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSEANRDTGSSPMGAAVGRPQQGDKPAGESAPALTRPTDQRSAHIAAAPQPS-TRRSRAXXXXXHAPSTRFGLTAPSDSRSSASTTSLRRLVEDIYKLDVTGRFREYAAAEDTWCAAVAFLDEDDGAGWAVLQALI 1406
++ ++P D +I R VGEMGF ITDWEY+ RNPLDP+ P RT+ K +VRLFE + RVLLKEF + +A EL V+ L S G A+ P ++L G + + F WM +FP PP GN+WLVF+WE + + P ++ E D ++ RR + T A+L+ +M +V A+ +HE G+ HRSLG SS ++T + L V + DF FA+ + D+ TL++A +G +P + + +D+ + Y +E + S L+ D A P + A QP T RS S+S S SL+RL+ED++ D+ FREY +AE+ W V FLD+++GAGW +L +++
Sbjct: 75 QILRFSPGDFEILRAVGEMGFATITDWEYYTP-RNPLDPNQPSRTIQKNSLSVRLFEGKISSGSLRNSRVLLKEFFPSARSIAEQELRVYTDLVESLPEGGDLAET-PVAILRGWFFTTDECETASFQRSWMQRFPRTQPPSAGNLWLVFRWEGNRAMSDLPRLSKKKETFWDKLNQPVFGRRDAKETKFAYLKRLMKESVSALVFLHERGIVHRSLGSSSISLSTIEFTEVNQLQVNIRDFGFAARVAKMDDETLQKARE------AGANTPKEIVEFVTSQDIYAMAYALVETVFSVLATPRED-----------------------ADVQVSPIMKSWLSNAEVSQPGQTPRS-------------------SNSESPEDQNSLKRLIEDVFGGDIGVGFREYCSAEERWKDVVEFLDQEEGAGWQLLDSML 459
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A5J4Z0Z3_PORPP (Calcium/calmodulin-dependent protein kinase type 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0Z3_PORPP) HSP 1 Score: 179 bits (454), Expect = 4.100e-47 Identity = 117/341 (34.31%), Postives = 175/341 (51.32%), Query Frame = 3
Query: 33 ASFTVRSHLGHAAQVHDTQLWSRRKSRRGK----------LSMELQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAA----ERVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTP-PRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSE 1010
ASF R + HA V + R++ + + +S L ++ D QI R G+ G+ E+T+WEY+ DP+ PQRTV G +VRL+EA RVLLKEF +LA NE +++RL ++ + P + L+GS F F ++W FP+ P +G+ WLVF+WE + A+ KQ YL D + P RR+ FL +++ A++AV +H+ G+ HRSLGP+S +NT DE TP ++ D FA L + D+ +LR A G VSP A+ +DL+ LGY+FLE++ S LS+
Sbjct: 15 ASFVTRRTVTHAGSVRTLEARGFRQASKKRVQPTSHTSTRISCALARFSTSDFQILRQCGQQGYYEVTEWEYY----QKRDPTQPQRTVESSGVSVRLYEAKITVGPRRNSRVLLKEFLPQGLELAVNEAKIYERL---YDLTQDSMSELPVATLLGSFKGSG-FSTAEFQKKWAGSFPSAGKVPDEGSPWLVFRWEGTRTLANLRNYKQTQNYL-DFVFPDLAFRRKKLFLIKLISEALEAVGFLHDRGIVHRSLGPASLLVNTLDETTPTLFDCKVRDLGFAQQLSELDDQSLRLARE------KGAVSPEALTRFFQNDDLKALGYSFLEIIFSFLSD 340
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A7S3ECV9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECV9_9RHOD) HSP 1 Score: 163 bits (412), Expect = 2.260e-41 Identity = 106/310 (34.19%), Postives = 161/310 (51.94%), Query Frame = 3
Query: 99 RRKSRRGKLSMELQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEA---STPAAE-RVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTL-TPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSEA 1013
RR SRR + + + D +I R VG+ G+ E+T+WEY+ DP+ P+RT+ +RL++ S P RV+LKEF ++ E V++ L R P S L+GS D TF F W FP PPR+G+ WLVF WE ++ + F + +Q + D P +++ RR +LR +MA A++AVA +H G HRSLGP+S +NT DE L +++ DF F SS+ ++ +++A SG SP V+ +D+ LGY F+E++ SLSE+
Sbjct: 29 RRNSRRTVCHVGI-GFTASDFEILRQVGQQGYYEVTEWEYY----ERRDPTEPRRTIETSKPAIRLYDGKILSGPLRNTRVMLKEFLEPAYEIGIREAEVYKGLLDIENQR-----EMPISELLGSFCGDHTFQKPEFELAWRRSFPRAGDPPRKGSPWLVFTWEGNLTTSGFASFEQPVNFT-DRFFPAKKVERRRQYLRKVMALALEAVAFLHSRGFIHRSLGPASLSVNTLDENLVNLLDLKIRDFGFGSSVSLLEDKEVKKARE------SGASSPTEVSRYFFADDIYALGYAFMEIIFGSLSES 321
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: R1DKL5_EMIHU (Protein kinase domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKL5_EMIHU) HSP 1 Score: 142 bits (359), Expect = 2.870e-34 Identity = 105/291 (36.08%), Postives = 145/291 (49.83%), Query Frame = 3
Query: 135 LQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGGATVRLFEASTPAAERVLLKEFPAAVAQLAGN-ELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSL 1004
L+ + P + I+R VG++GF T+W+Y GG RNPLDPS P RTV GA+VRLFEA R LLKEF A A+ G EL+V++ L E GGA D + +G+L G +WL+F+W L + F +Q L + D RR ++R +++A+A++H AGVAHRSLG SS ++T ++R L V L D FA++ + A R AG P V +L DL LGY LEL+LS+L
Sbjct: 21 LRVFRPSSITIRRQVGQLGFATETEWQYAGGKRNPLDPSQPSRTVEASGASVRLFEARLADGSRSLLKEFLGAEARAIGERELAVYRHLE---EEAGGAPDLS-----VGTLC--------------------------GRLWLIFRWVPLRTIGGFARVEQPPAGLAGLFDWGAAQARRE-WVRTASRESLRALAALHAAGVAHRSLGSSSLLVSTYEQREAARLRVTLVDLGFAATPALLSAEEIAAAMRQAGC------GPTGVLPLLTLYDLHGLGYVLLELVLSAL 270
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A1X6P1K4_PORUM (Protein kinase domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1K4_PORUM) HSP 1 Score: 137 bits (345), Expect = 1.290e-31 Identity = 105/321 (32.71%), Postives = 153/321 (47.66%), Query Frame = 3
Query: 135 LQNYAPRDLQIKRFVGEMGFMEITDWEYFGG--GRNPLDPSAPQRTVSKGGATVRLFEASTPAA-----ERVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAAD------------AAPSSVLMGSLVADETFDNLRFIERWMTKFPTL-TPPRQGNMWLVFKWESLMSFASF---------PTAKQEGEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPETLTVRLADFAFAS-SLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLS 1007
L+++ +D I+R V G++ +T+W Y G DP+AP RT VRL++A+ A RV+LKEF +L E +++LA + +A P + L+GS ++D+ F + F + W FP PPR WLVF WE + AS+ A G L+D + P RRRTAFLRA++A A AVA +H AGV HRSLG SS +NT +ER ++ V++ DF FA + D+A AAR + A+ ED+ LG EL+ +L+
Sbjct: 122 LRSFVAQDFLIRRPVASQGYVALTEWTYRDAESGAEVWDPTAPTRTADASAPAVRLYDATIVAPGPSRNTRVMLKEFLPGGTELGVAEAEAYEKLAAAADAXXXXXXXXXXXXXXXXPGGPPVATLLGSFLSDDAFASPDFRDSWRRSFPAAGEPPRPNTPWLVFLWEGNTTAASYLASTSPAAVAAAGVTGVGLIDSLFPGGAYRRRTAFLRAVLAGAAAAVAHLHAAGVTHRSLGLSSLLLNTREERLAASVGVKVRDFGFARPTAAAADDAGAVAAARXXXXXXXXXXXXVRTAA--EAEDVYALGVAAAELVFGALA 440
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: A0A1E7FEK6_9STRA (Protein kinase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEK6_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.480e-22 Identity = 128/499 (25.65%), Postives = 195/499 (39.08%), Query Frame = 3
Query: 156 DLQIKRFVGEMGFMEITDWEYFGGGR---------------NPLDPSAPQRTVSKGGATVRLFEA-----------STPAAERVLLKEFPAAVA-QLAGNELSVHQRLARSWEAR--------GGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLT-----------------------PPRQGNMWLVFKWESLMSFASFPTAKQE-------------GEYLLDVIDPTRRLRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTADERTPET----------LTVRLADFAFASSLGDP--DEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLSSLSEANRDTGSSPMGAAVGRPQQGDKPAGESAPALTRPTDQRSAHIAAAPQPSTRRSRAXXXXXHAPSTRFGLTAPSDSRSSASTTSLRRLVEDIYKLDVTGRFREYAAAEDTWCAAVAFLDEDDGAGWAVLQAL 1403
DL I F+G MGF E+TDWEY+ NP + S P+RT G+ VR+F A S R+L+KE+ +A QLA N+ RL + GG A + ++ D LR + +T F + PP+ ++W+V+++ L + AS+ + E G ++ P R R ++ +M ++ A+A+IHE G+ HRS+G +SF I++ + E L V+L+DF FA L D D+ + RA R G+ + L + + + EDL LG+ FL LLL SL++ + A AP P+T ++++L+ +I+KLD FREY AE+ W V LDE DGAGW VL+ L
Sbjct: 95 DLIINDFIGNMGFDEVTDWEYYYDESXXXXXXXXDRKVVEPNPFEKSMPKRTRISSGSVVRVFRAELVGRLGATISSRGLDRRILVKEYSGELALQLARNDQVAISRLQSQLMEKEKNKDAIEGGWIQCANARTVLARKDDAHVGDLLRTLS--LTSFLGILGQVNLAEIDDMNPNEFYRALGVPPPKTNSVWVVYEYAGLNTIASYTSMAPEKKRAATPPKKNFFGRFVQPPALPPFR-ERANFVIKGIMKESLSALATIHEEGIVHRSIGRNSFVISSPTQNKAEASSIYFTRVSGLVVKLSDFGFAGLLEDSANDQEFISRA-RSFGLSFRTGDTSLTMTNFAMAEDLHALGFVFLGLLLVSLADLPEN--------------------------------------ANAPMPNTDED-----------------------------TIQKLLNEIFKLDFQA-FREYVEAEEVWEKLVLLLDEKDGAGWTVLETL 521
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Match: F0Y670_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y670_AURAN) HSP 1 Score: 108 bits (269), Expect = 5.930e-21 Identity = 92/318 (28.93%), Postives = 137/318 (43.08%), Query Frame = 3
Query: 135 LQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRT---VSKGGATVRLFEAST--PAAE------RVLLKEFPAAVAQLAGNELSVHQRLARSWEARGGAADAAPSSVLMGSLVADETFDNLRFIERWMTKFPTLTPPRQGNMWLVFKWESLMSFASFPTAKQEGEYLLDVIDPTRR-------------LRRRTAFLRAMMAAAVQAVASIHEAGVAHRSLGPSSFRINTA--DERTPET----LTVRLADFAFASSLGDPDEATLRRAARLAGMPASGRVSPLAVASILVREDLQCLGYTFLELLLS 998
++ + ++ ++RF+GE+G +E+TDWEY G NPLDP+ P RT + G VRLF A+ P A RV L+E+ A +A EL + AR A G D D F +E W+ T PP+ G WL+F W + A+ K L P RR R+R +++RA+ V+A+A +HE+G +HRSL ++F +++ D+ T L V+L F+ A + + +DL LGY LELLLS
Sbjct: 391 MREFRAAEVTLERFIGELGVVEVTDWEYSGELANPLDPAQPARTKRDFAADGPPVRLFLAAVDDPGARARGEDTRVALREYSGTAAAVAARELETQRGGARGVVALRGTLDDDERGFFGSGAAQDPAF-----VEAWVANLGT-EPPKVGASWLIFDWSGTATVANLCGPKTARGNPLYAPPPPRRGFXXXXXXXAAWTFRQRYSYVRAVARGMVEALARLHESGFSHRSLSAAAFALDSKGQDKNVLPTNAPLLEVKLQFLGFSE----------------------------AATAAEINDDLNALGYVLLELLLS 674 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349571 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6136 ID=mRNA_6136|Name=jgi.p|Trimin1|349571|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1605bp|location=Sequence derived from alignment at Contig_45:753193..760545+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGCTGCTGCTGCAGCAGCTGCTGCACCATGTCGCTTCTTTCACGGTGCGGback to top protein sequence of jgi.p|Trimin1|349571 >Trimin1|349571|estExt_Genemark1.C_Ctg_450096 ID=Trimin1|349571|estExt_Genemark1.C_Ctg_450096|Name=jgi.p|Trimin1|349571|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=472bp MELQNYAPRDLQIKRFVGEMGFMEITDWEYFGGGRNPLDPSAPQRTVSKGback to top mRNA from alignment at Contig_45:753193..760545+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6136 ID=mRNA_6136|Name=jgi.p|Trimin1|349571|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7353bp|location=Sequence derived from alignment at Contig_45:753193..760545+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_45:753193..760545+ >mRNA_6136 ID=mRNA_6136|Name=jgi.p|Trimin1|349571|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1416bp|location=Sequence derived from alignment at Contig_45:753193..760545+ (Tribonema minus UTEX_B_3156 )back to top |