mRNA_603 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: A0A835ZC66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC66_9STRA) HSP 1 Score: 735 bits (1897), Expect = 1.820e-267 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1 Query: 1 MRLWKPEQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCDFARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQVSFISPLTVMS 1143 MRLWKPEQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCDFARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQVSFISPLTVMS Sbjct: 1 MRLWKPEQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCDFARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQVSFISPLTVMS 381
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: A0A835Z9W3_9STRA (Putative acyl-CoA thioesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W3_9STRA) HSP 1 Score: 387 bits (995), Expect = 4.920e-129 Identity = 222/399 (55.64%), Postives = 268/399 (67.17%), Query Frame = 1 Query: 22 QLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTT-SAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCDFA-------------------------RFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAG--------EAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDD-GRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQV 1113 QL E E AA +R HP+PASAS KS+TY FS +S LR++Y NPWGFIR SR+LEDLDALAA IA++HC T SA G FWP++VTASVDRI + + L+RD+ L G + WTG SS+QI M C A RFTFV RSR +GRSTP+P L++E+P +++ FR Q MDR++L R+ G G A A EA A ALL EG LL+AMPC A +VL+ DTA SSVI+CMPQERNTA+RIFGGFLM RALEL F AY G VP T++VDEV F +PVDVGDILKL++C+L TR GR+PRASVEVLAHVLRP + + LSNRFDFTF FP L AR D G E ++RVLPSD++EA RV QV Sbjct: 33 QLQEVEELAAKQRHAHPRPASASRKSITYDFSRNSMLRSAYANPWGFIRISRVLEDLDALAATIAMEHCATECSAHGVTFWPMLVTASVDRIEMKQQPMLERDLVLSGHIVWTGRSSMQILMHCAVAQDSTPAAEDAAATAAAAAPSPWLEARFTFVARSRDTGRSTPIPPLLIETPKEDEAFRHAQRAMDRKKLLRSGGGGATLAGANGTAPVSSPEAEAAAAALLREGRLLKAMPCLADPRSVLVGDTAQSSVIVCMPQERNTANRIFGGFLMGRALELGFATAYTTVGAVPFTAVVDEVVFHQPVDVGDILKLDSCVLQTRAGGALGRSPRASVEVLAHVLRPDKRTMHLSNRFDFTFKFPEL--ARRDDG--EPQRELQRVLPSDVDEAQRVVQV 427
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: D7G421_ECTSI (Acyl-CoA thioesterase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G421_ECTSI) HSP 1 Score: 247 bits (631), Expect = 2.160e-73 Identity = 172/411 (41.85%), Postives = 224/411 (54.50%), Query Frame = 1 Query: 64 LHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCDF------------------------ARFTFVTRSRGSGRSTPVPQLVLES-PVQEQE--------------------FRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQA-----------LLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTR-CYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALV-----GAR--ADGGGSEEAPRVKRVLPSDMNEALRV 1104 L P P S S ++ Y FST SFLR YRNP G +R R+LEDLDALA IA HC+ + +P++VTASVDRI + + LD D+TL G V WTG SS+ I MRC A FTFV R R +GRS V L L + P+Q++ +R V R+ L+R A GAAAE F+ +A L+A G L +P A AVL+ T SS ++CMPQ RNTA+RIFGGFLM RA E+AF AA+ G+ P S +DEV F +PVDVGD++K++ACIL T+ + G +P+A VEVLA V+RP +++SNRF+ TFSFP L G R ADG A ++ VLP++ EA R+ Sbjct: 117 LRPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLVRIGRILEDLDALAGNIAFKHCSEDPS-----FPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSMVINMRCSTSAPGVCYVGDDPWADGDDDSCWLDANFTFVARDRETGRSRAVSPLDLGTDPLQDEPGDGSDGSPGERDPEHGWRALWRVVHSHKSRQALERNAAKKGAAAEG---FLEVEAARLKREQEASTLVAAGFPLLHLPALANPHAVLMSQTLTSSTLICMPQHRNTANRIFGGFLMHRAYEVAFCAAFTFGGSRPRFSEIDEVVFLQPVDVGDLVKMDACILYTKEGKEAGSSPQACVEVLASVVRPETVDSKVSNRFNLTFSFPELASGVEEGNRPCADGFSQSPAALLRTVLPANATEASRI 519
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: F6HAX8_VITVI (Uncharacterized protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=F6HAX8_VITVI) HSP 1 Score: 230 bits (586), Expect = 4.180e-67 Identity = 153/378 (40.48%), Postives = 211/378 (55.82%), Query Frame = 1 Query: 19 EQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCD---------------FARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTA-GAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRV 1104 E+ E +DAA+E +L PK + S S+ YKFS+ LR YRNPW IRS ++LEDLDALA I+ HC+ F ++VTASVDR+ + + +D D+ + G+V W G SS++I + A FTFV R +G+S P+ Q+ SP +QE + DR ++++ G E EA R +ALLAEG + MP A D++LIRDT L I+C PQ+RN RIFGGFLM +ALELAF+ Y G P D V+F +PVDVG+ L+L +C+L T + R P +VEV+AHV RP S+ +SN F FTF+ A A DG +++ V+P+ EA RV Sbjct: 142 EKSQELPSDAASESELVPKTPAQSRTSIIYKFSSDYILREQYRNPWNEIRSGKLLEDLDALAGTISFKHCSNDKGAAMPF--LLVTASVDRMVLKKPIRVDTDLKIVGAVTWVGRSSMEIRLEVIQPTPEASDPSDSLALTANFTFVARDSKTGKSAPINQI---SPETQQEKLLWREAEDRNQMRKKKRGENMRGLEDREAD-RLEALLAEGRVFCDMPALADRDSILIRDTRLEYTIICQPQQRNIHGRIFGGFLMRKALELAFSTTYAFAGAAPLFVEADHVDFLKPVDVGNFLRLKSCVLYTELENPTR-PLINVEVVAHVTRPELRSSEVSNTFYFTFT--ARPEAMKDG------LKIRSVVPATEEEARRV 504
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: A0A830C4G5_9LAMI (Acyl-coenzyme a thioesterase 9 mitochondrial n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C4G5_9LAMI) HSP 1 Score: 224 bits (570), Expect = 3.660e-66 Identity = 140/379 (36.94%), Postives = 207/379 (54.62%), Query Frame = 1 Query: 19 EQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCD---------------FARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQ 1110 E+L+ AT+ +L K S S SV YKFS+ LR YRNPW IR ++LEDLDALA I+ HC++ + ++VTASVD++ + + +D D+T+ G+V W G SS++I + A FTFV R +G+ST + Q+ SP E+E + +R +L++ E R LL+EG + MP A D++LI+DT L + ++C PQ+RN RIFGGFLM RA ELAF AY+ G+ P VD V+F +PVDVG+ L+ N+C+L T + + P +VEV+AHV+RP S+ +SN+F FTF+ + +++ V+P+ EA RV + Sbjct: 19 ERLSNTTESGATQSELITKAPSKSRTSVLYKFSSDYILREQYRNPWNEIRLGKLLEDLDALAGTISFKHCSSEDSSTRSL--LLVTASVDKMVLRKPIRVDTDLTIAGAVTWVGRSSMEIQLEVTQPSEESSDPSDAVALTANFTFVARDSKTGKSTIINQI---SPETEKEKSLWEEAEERNKLRKKKKGEQKKEINDEEKNRLGELLSEGRVFCDMPALADRDSILIKDTCLQNSLMCQPQQRNIHGRIFGGFLMRRAFELAFATAYSFAGSAPCFHEVDHVDFLKPVDVGNFLRFNSCVLYTELENPSQ-PMINVEVVAHVMRPEHRSSEVSNKFYFTFT--------VHSDALKNGQKIRNVVPATEEEARRVIE 383
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: A0A2P6PTP0_ROSCH (Putative thiolester hydrolase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6PTP0_ROSCH) HSP 1 Score: 224 bits (571), Expect = 8.820e-66 Identity = 145/378 (38.36%), Postives = 210/378 (55.56%), Query Frame = 1 Query: 19 EQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMR-------CD-------FARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQ 1110 E+L + DA + QL K S S ++ Y FST LR YR+PW +R ++LEDLDALA I+V HC ++VTASVD+I + + ++D D+ + G+V W G SS++I + CD A F FV R +G++ PV +L+ E+ ++ F+ + R+ RT G E GE R ++LLAEG + MP A D++L+RDT+L + ++C PQ+RN RIFGGFLM RA ELAF+ AY G VP VD V+F RPVDVGD L+ +C+L T D P ++EV+AHV RP S+ +SN F FTF+ R + ++ R++ V+P+ EA R+ + Sbjct: 57 ERLLDPPVDAPPQSQLLNKTPSQSRTTILYNFSTDFILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCYAVDTTTRPL--LLVTASVDKIVLKKPISVDIDLKIVGAVIWVGRSSIEIQLEVTQSTKGCDNSNSLALSANFIFVARDSKTGKAAPVNRLLPETEREQLLFKEAETRNTLRK--RTKGGEKREFENGEVN-RLESLLAEGRIFCDMPALADRDSILLRDTSLENSLICQPQQRNIHGRIFGGFLMHRAFELAFSTAYAFAGLVPCFLEVDHVDFLRPVDVGDFLRFKSCVLYTEVNPDH--PLITIEVVAHVTRPELRSSEVSNTFYFTFT------VRPEAKATKNGFRIRNVVPATEEEARRILE 421
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: A0A6P6WRG3_COFAR (acyl-coenzyme A thioesterase 9, mitochondrial-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6WRG3_COFAR) HSP 1 Score: 228 bits (580), Expect = 1.880e-65 Identity = 149/380 (39.21%), Postives = 208/380 (54.74%), Query Frame = 1 Query: 19 EQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCD---------------FARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTA-GAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQ 1110 E+L ADA + +L KP S S S+ YKFST LR YRNPW IR +++EDLDALA I+ HC+ SA ++VTASVD+I + +D D+T+ G+V W G SSL+I + A FTFV R +G+S PV Q+ SP E+E + +R ++++ G + E R LLAEG + MP A D++LIRDT L + ++C PQ+RN RIFGGFLM RA ELAF AY+ G P VD V+F +PVDVG+ L+ +C+L T + + P +VEV+AHV RP S+ +SN+F FTF+ R D + +++ V+P+ EA RV + Sbjct: 230 ERLNNVAADAPSPNELIAKPPSKSRTSIVYKFSTDYILREQYRNPWNEIRMGKLVEDLDALAGTISFKHCS--SADSTTMPLLLVTASVDKIVLRRPIRVDTDLTIVGAVTWVGRSSLEIQLEVTQSAQETSSQSDSLALTANFTFVARDSRTGKSAPVNQI---SPETEREKLLWEEAEERNQIRKKKRGEKRQGIDNDEETKRLNELLAEGRVFCDMPALADRDSILIRDTYLQNSLICQPQQRNIHGRIFGGFLMRRAFELAFATAYSFAGAAPRFVEVDHVDFLKPVDVGNFLRFKSCVLYTELENPDK-PMINVEVVAHVTRPEFRSSEVSNKFYFTFT------VRPDA--IKNGLKIRNVVPATEEEAKRVIE 595
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: A0A7N0UH67_KALFE (Uncharacterized protein n=3 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UH67_KALFE) HSP 1 Score: 223 bits (569), Expect = 7.660e-65 Identity = 142/379 (37.47%), Postives = 206/379 (54.35%), Query Frame = 1 Query: 19 EQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCD---------------FARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQ 1110 E+L + +++A ++ +L K S+S S+ YKFS+ LR YRNPW IR +++EDLDALA I+ HC ++VTASVD+I + + ++D D+++ GSV W G SS++I + A FTFV R +G+S P+ + SP E+E Q +R +++ E R ALLAEG + MP A +++LIRDT + ++C PQ+RNT RIFGGFLM RA ELAF AY G P +D V+F RPVDVGD L+ +C+L T D + P +VEV+AHV +P S+ +SN+F FTF G R D + +++ V+P+ EA RV + Sbjct: 120 EKLDDAQSEAVSQGKLAMKTPSSSRTSIIYKFSSDPILREQYRNPWNQIRMGKVVEDLDALAGTISFKHCCNEDRTTRPL--LLVTASVDKIVLKKPISVDCDLSISGSVTWVGRSSMEIQLEVTQSTEENQDSLDSVALVANFTFVARDSRTGKSAPINPI---SPETEREKLLWQEAEERNIMRKKKXXENKLGLKNEDTNRLSALLAEGRVFCDMPALADRNSILIRDTCHQNSLICQPQQRNTHGRIFGGFLMRRAFELAFATAYAFIGAAPRFMEIDHVDFLRPVDVGDFLRYKSCVLFTELEDSSK-PLINVEVVAHVTKPELRSSEVSNKFYFTF------GVRPDS--APNGLKIRNVVPATEEEARRVLE 484
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: UPI001CC3B7E3 (acyl-coenzyme A thioesterase 2, chloroplastic-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3B7E3) HSP 1 Score: 224 bits (570), Expect = 1.300e-64 Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 1 Query: 19 EQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVM-VTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCD---------------FARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQ 1110 E+L + DA T+ +L K S S SV Y FST LR YR+PW +R ++LEDLDALA I+V HC+ + PV+ VTASVD++ + + +D+D+ + G+V W G SS++I + A FTFV R +G+S+PV Q+ E+ + + R+ +R G E G+ R ++LLAEG + MP A D++LIRDT L + ++C PQ+RN RIFGGFLM+RA ELAF+ AY G P VD V+F RPVDVG+ L+L +C+L T + ++P ++EV+AHV RP S+ +SN F FTFS A DG +++ V+P+ EALR+ + Sbjct: 150 ERLIDPPLDAPTQSELLTKTPSQSRTSVLYNFSTDYILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSNDD---NMTRPVLLVTASVDKMVLKKPICVDKDLKIVGAVIWVGRSSIEIQLEVTQSTEESSDPSDAVALTANFTFVARDYKTGKSSPVNQISPETDKERMLWEEADARNKHRKRKRENKRG---VENGDVN-RLESLLAEGRVFCDMPALANRDSILIRDTCLENSLICQPQQRNIHGRIFGGFLMNRAFELAFSTAYAFAGAAPCFLEVDHVDFLRPVDVGNFLRLKSCVLYTE-LGNPQSPLINIEVVAHVTRPELRSSEVSNTFYFTFSI--RPEAMKDG------LKIRNVVPATEEEALRILE 513
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Match: UPI001CFC34AA (acyl-coenzyme A thioesterase 2, chloroplastic-like isoform X1 n=2 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFC34AA) HSP 1 Score: 223 bits (568), Expect = 1.360e-64 Identity = 141/371 (38.01%), Postives = 207/371 (55.80%), Query Frame = 1 Query: 43 DAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNPWGFIRSSRMLEDLDALAAMIAVDHCTTTSAGGELFWPVMVTASVDRITIAENAALDRDMTLRGSVKWTGGSSLQIAMRCD---------------FARFTFVTRSRGSGRSTPVPQLVLESPVQEQEFRRVQHVMDRRRLQRTAGAGGAAAEAGEAFVRAQALLAEGELLRAMPCRAGSDAVLIRDTALSSVILCMPQERNTADRIFGGFLMSRALELAFTAAYNAFGTVPATSLVDEVEFGRPVDVGDILKLNACILSTRCYDDGRAPRASVEVLAHVLRPTEPSTRLSNRFDFTFSFPALVGARADGGGSEEAPRVKRVLPSDMNEALRVAQ 1110 D+ ++ +L K S S ++ YKFS+ LR YRNPW IR ++LEDLDALA I+ HC S G ++VTASVDR+ + + +D D+ + G+V W G SS++I + A FTFV R +G+S+P+ Q++ E+ E+E + R ++++ A A E R ALLAEG++ +P A D++LIRDT + ++C PQ+RN RIFGGFLM +A ELAFT AY G+ P VD V+F +PVDVG+ L+ +C+L T D R P +VEV+AHV+RP ++++SN+F FTF+ A DG ++ V+P+ EA RV + Sbjct: 138 DSVSQSELGTKTPSESRTTILYKFSSDFILREQYRNPWNEIRMGKLLEDLDALAGTISYKHCC--SEDGSTMPILLVTASVDRMVMKKPILVDTDLNITGAVTWVGRSSMEIQVEVTQSTQDAADASENIALVANFTFVARDAKTGKSSPLKQILPET---EKEKLLWEEAEQRNKIRKHKKAENRMTFANENKDRLNALLAEGQVFSDLPALADRDSILIRDTYHENSLMCQPQQRNIHGRIFGGFLMRKAFELAFTNAYAFAGSAPRFVEVDHVDFVKPVDVGNFLRFKSCVLYTELEDPSR-PMINVEVVAHVMRPELRTSQISNKFYFTFTI--RPEAMKDGMS------IRNVVPATEEEAWRVLE 494 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156953 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_603 ID=mRNA_603|Name=jgi.p|Trimin1|156953|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1146bp|location=Sequence derived from alignment at Contig_2:714259..718801+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGGCTGTGGAAACCAGAGCAGTTGGCTGAATTCGAAGCTGATGCTGCback to top protein sequence of jgi.p|Trimin1|156953 >Trimin1|156953|e_gw1.2.61.1 ID=Trimin1|156953|e_gw1.2.61.1|Name=jgi.p|Trimin1|156953|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=382bp MRLWKPEQLAEFEADAATERQLHPKPASASAKSVTYKFSTSSFLRNSYRNback to top mRNA from alignment at Contig_2:714259..718801+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_603 ID=mRNA_603|Name=jgi.p|Trimin1|156953|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4543bp|location=Sequence derived from alignment at Contig_2:714259..718801+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:714259..718801+ >mRNA_603 ID=mRNA_603|Name=jgi.p|Trimin1|156953|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1146bp|location=Sequence derived from alignment at Contig_2:714259..718801+ (Tribonema minus UTEX_B_3156 )back to top |