mRNA_6038 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|166558
Unique NamemRNA_6038
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A836CC83_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC83_9STRA)

HSP 1 Score: 446 bits (1147), Expect = 1.720e-158
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 666
            MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR
Sbjct:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 222
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A6H5JEJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ2_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 2.380e-86
Identity = 126/221 (57.01%), Postives = 168/221 (76.02%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYG 663
            MDGNRR+G   +GDPL+GH+DGGK L +F+EWC++AGVA  T FAFSTENW+R+  EV+LLMD +C  C    +DA  +N+RIR L + A +LP  VL A+  AE  T  CTG + NICLSYG R+ELA ACR+IA++V SGA +   +DE A+   LLT+ + DPD+LIRTSGE+RVSNFLLFQ+AYTELFF++K WP++TR D+  +F+ ++ R+RR+G
Sbjct:  185 MDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVAVATAFAFSTENWKRDAHEVNLLMDLVCTSCGELMEDAGKKNMRIRVLASDATKLPERVLSAIQKAEDATRDCTGFLFNICLSYGARQELANACRQIAQEVASGATSLDLVDEYAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITRRDVLDIFEAFKTRKRRFG 405
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A7S1SEG8_ALECA (Alkyl transferase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SEG8_ALECA)

HSP 1 Score: 252 bits (643), Expect = 2.100e-80
Identity = 122/222 (54.95%), Postives = 157/222 (70.72%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 666
            MDGNRRYG   HG PL GH  GG+ L DF++WC + GV ALTVFAFSTENW+R   EV  +M    E   R  + A+  NVR+R L + A  L   +  A+   E  +A+C+G+ LN+C+SYGGR ++AGACR++A++  +G +    ID+ A+  RLLT  + DPDVLIRTSGERR+SNFL+FQLAY ELFFLEKHWPEVTR+DL A+   YRAR RR+G+
Sbjct:   97 MDGNRRYGRREHGSPLSGHRAGGERLRDFIDWCAELGVEALTVFAFSTENWKRGPEEVSAMMGLFLEEVPRLGEHALRLNVRVRFLSSDAQPLSADLRAAMQRLEERSASCSGMRLNVCVSYGGRGDIAGACRQLAQEAVAGEVDPQQIDDRAVAQRLLTADIPDPDVLIRTSGERRLSNFLMFQLAYAELFFLEKHWPEVTREDLMAIVAGYRARHRRFGK 318
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A833SM03_PHYIN (Alkyl transferase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SM03_PHYIN)

HSP 1 Score: 248 bits (633), Expect = 1.760e-78
Identity = 113/222 (50.90%), Postives = 160/222 (72.07%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 666
            MDGNRRYG A +G  +RGHADG K L +F +WC+DAG+ ALTV+AFSTENW RE+ EVD LM+   ++      +A+ R+VR+R L++   +LP  ++EA+   E  T AC+   LN+C+SYG R+E+ G CR+IA +V  G ++   I+ED +  R+LT  + DPD+LIRTSGE R+SNFLLFQ+AYTEL F++K WPEVT+DD+  +  ++  R+RR+G+
Sbjct:  128 MDGNRRYGKAKYGAGVRGHADGSKTLVNFTDWCIDAGMQALTVYAFSTENWNREQSEVDALMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAIKEIETKTQACSRFSLNLCVSYGARDEIVGVCRKIATEVAKGEVSVEDINEDLLSQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYTELIFMDKMWPEVTKDDVQDIIIEFNRRKRRFGK 349
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A7S2GNW1_9STRA (Alkyl transferase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNW1_9STRA)

HSP 1 Score: 246 bits (627), Expect = 4.590e-78
Identity = 117/221 (52.94%), Postives = 156/221 (70.59%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYG 663
            MDGNRRYG   + D L+GH DGG+ L D V WC++ GV  LTV+AFSTENW+R+  E+DLLM    +Y +R  K+A+  N+RIR   T   RLP SV+ A+   ER+T   TG  LN+C+SYG R ++A AC+R++E V  G +    I+E  I   L+T  + DPD+LIRTSGERR+SN+LLF+LAYTELFFL+K+WP+VT+ DL  + ++Y AR RRYG
Sbjct:   91 MDGNRRYGREKYQDALKGHWDGGQTLVDTVRWCMEEGVQFLTVYAFSTENWKRDSAEIDLLMTIFVKYAERCEKEALENNIRIRVFCTERQRLPRSVIGAIDKMERNTRDKTGFSLNLCVSYGSRGDMALACQRVSERVVKGELRVEDINEQVIAQNLVTHGIPDPDILIRTSGERRLSNYLLFELAYTELFFLDKYWPQVTKSDLLNILNEYDARHRRYG 311
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: W2PTH8_PHYPN (Alkyl transferase n=10 Tax=Phytophthora TaxID=4783 RepID=W2PTH8_PHYPN)

HSP 1 Score: 245 bits (625), Expect = 2.840e-77
Identity = 111/222 (50.00%), Postives = 157/222 (70.72%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 666
            MDGNRRYG   +G  +RGH DG K L +F +WC+DAG+ ALTVFAFSTENW RE+ EVD LM+   ++      +A+ R+VR+R L++   +LP  ++EA+   E  T  C+   LN+C+SYG R+E+ GACR+IA +V  G  +   I+ED +  R+LT  + DPD+LIRTSGE R+SNFLLFQ+AY+EL F++K WPEVT+DD+  +  ++  R+RR+G+
Sbjct:  128 MDGNRRYGKTKYGAGVRGHTDGSKTLVNFTDWCIDAGIQALTVFAFSTENWNREQSEVDALMNLFSQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAIEEIETKTQNCSKFSLNLCVSYGARDEIVGACRKIATEVVRGETSVEDINEDLVSQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFMDKMWPEVTKDDVEGIIMEFNRRKRRFGK 349
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A3R7NKM6_9STRA (Alkyl transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NKM6_9STRA)

HSP 1 Score: 244 bits (624), Expect = 2.890e-77
Identity = 110/222 (49.55%), Postives = 161/222 (72.52%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 666
            MDGNRRYG   +G  +RGH+DG + L +F +WC+DAG+ ALTVFAFSTENW R++ EVD LM+   E+      +A+ R++R+R L++   +LP  ++E++   E  T+ CT   LNIC+SYG R+E+ GACR+IA +V +G  +   I+ED +  R+LT  + DPD+LIRTSGE R+SNFLLFQ+AY+EL FL+K WPE+T++D+ A+  ++  R+RR+G+
Sbjct:  117 MDGNRRYGKNKYGAGVRGHSDGSRTLVNFTDWCIDAGIKALTVFAFSTENWNRDQSEVDALMNLFNEFMHEIVPEALKRDIRVRVLVSDGRKLPTYIVESIEQIETQTSRCTAFNLNICVSYGARDEIVGACRKIATEVANGETSIEDINEDLLGQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFLDKMWPEMTKNDVQAIIVEFNRRKRRFGK 338
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A8K1CIV8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIV8_PYTOL)

HSP 1 Score: 243 bits (620), Expect = 1.770e-76
Identity = 117/223 (52.47%), Postives = 155/223 (69.51%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSA-VFDQYRARRRRYGR 666
            MDGNRRYG A +G  +RGH+DG K L  F +WC++AGV ALTVFAFSTENW RE+ EVD LM    ++  +   +A+ RN+R+R L++   + P  +++A+   E  T  C G  LNIC+SYG R EL GACR+IA  V  G +A  +IDE  I   LLT  + DPDVL+RTSGE R+SNFLL+Q+AY EL FL+K+WPEVTRDDL   +  ++  R+RR+G+
Sbjct:  130 MDGNRRYGKATYGAGVRGHSDGSKTLVAFTDWCIEAGVQALTVFAFSTENWNREQSEVDALMGLFNQFMHQIVPEALQRNIRVRVLVSDGRKFPAYIVDAIEQIETKTRHCDGFNLNICVSYGARNELVGACRQIAAKVADGRVALDAIDEACISQHLLTADLPDPDVLVRTSGELRISNFLLYQIAYAELIFLDKNWPEVTRDDLHEHIIHEFSRRKRRFGK 352
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: A0A812WIJ2_SYMMI (Alkyl transferase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WIJ2_SYMMI)

HSP 1 Score: 238 bits (608), Expect = 2.550e-76
Identity = 115/221 (52.04%), Postives = 151/221 (68.33%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYG 663
            MDGNRRYG   H D L+GH  GG+ L DFV+WC++ G+  LTV+AFSTENW RE+ EV  LM  + +Y D F+++A  RNVR++ L T   +LP ++   V   +  T  CTG +LNICLSYGGR ++A ACR IA     G +  S I ED +   L T+ + DP++LIRTSGE R+SNFLL+QLAYTELFF+ K+WPE+TR DL  +  +Y  R RR+G
Sbjct:    9 MDGNRRYGREKHNDALQGHWTGGQTLVDFVQWCMEDGIEILTVYAFSTENWNREQHEVTTLMLIISKYADSFKQEARTRNVRVKVLATDFDKLPANIQGKVEELQDATRDCTGFLLNICLSYGGRADVANACRNIAAAAMKGDITPSDIGEDTVERFLSTKSIPDPELLIRTSGEYRISNFLLWQLAYTELFFVTKYWPEITRADLRQIIWEYSQRARRFG 229
[Close]
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Match: H3GUB2_PHYRM (Alkyl transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUB2_PHYRM)

HSP 1 Score: 241 bits (615), Expect = 7.910e-76
Identity = 110/222 (49.55%), Postives = 159/222 (71.62%), Query Frame = 1 
Query:    1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 666
            MDGNRRYG   +G  ++GH+DG + L +F +WC+DAG+ ALTVFAFSTENW RE+ EVD LM+   ++      +A+ R+VR+R L++   +LP  +++A+ + E  T  CT   LN+C+SYG R+E+ GACR+IA +V +G      I+ED +  R+LT  + DPD+LIRTSGE R+SNFLLFQ+AY+EL FL+K WPEVT+DD+  +  ++  R+RR+G+
Sbjct:  123 MDGNRRYGKTKYGVGVKGHSDGSRTLVNFTDWCIDAGIKALTVFAFSTENWNREQSEVDALMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVQAIEDIETKTHHCTKFSLNLCVSYGARDEIVGACRKIATEVANGETTVEEINEDLLSRRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFLDKMWPEVTQDDVQDIVFEFNRRKRRFGK 344
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166558 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC83_9STRA1.720e-158100.00Alkyl transferase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6H5JEJ2_9PHAE2.380e-8657.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1SEG8_ALECA2.100e-8054.95Alkyl transferase n=1 Tax=Alexandrium catenella Ta... [more]
A0A833SM03_PHYIN1.760e-7850.90Alkyl transferase n=1 Tax=Phytophthora infestans T... [more]
A0A7S2GNW1_9STRA4.590e-7852.94Alkyl transferase n=2 Tax=Dictyocha speculum TaxID... [more]
W2PTH8_PHYPN2.840e-7750.00Alkyl transferase n=10 Tax=Phytophthora TaxID=4783... [more]
A0A3R7NKM6_9STRA2.890e-7749.55Alkyl transferase n=3 Tax=Phytophthora kernoviae T... [more]
A0A8K1CIV8_PYTOL1.770e-7652.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A812WIJ2_SYMMI2.550e-7652.04Alkyl transferase (Fragment) n=1 Tax=Symbiodinium ... [more]
H3GUB2_PHYRM7.910e-7649.55Alkyl transferase n=1 Tax=Phytophthora ramorum Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_45contigContig_45:52810..54967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|166558|e_gw1.45.72.1
DescriptionAdds multiple copies of isopentenyl pyrophosphate (IPP) to farnesyl pyrophosphate (FPP) to produce dehydrodolichyl diphosphate (Dedol-PP), a precursor of dolichol which is utilized as a sugar carrier in protein glycosylation in the endoplasmic reticulum (ER)
COG categoryI
Max annot lvl4776|Peronosporales
EggNOG OGsCOG0020@1|root,KOG1602@2759|Eukaryota,3Q9JZ@4776|Peronosporales
Evalue1.28e-77
Seed ortholog67593.Physo133259
Hectar predicted targeting categoryother localisation
TranscriptId166880
TrackFilteredModels1
ProteinId166558
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166558gene_6038Tribonema minus UTEX_B_3156 geneContig_45 52810..54967 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6038_1exon_6038_1Tribonema minus UTEX_B_3156 exonContig_45 52810..52860 +
exon_6038_2exon_6038_2Tribonema minus UTEX_B_3156 exonContig_45 53211..53435 +
exon_6038_3exon_6038_3Tribonema minus UTEX_B_3156 exonContig_45 54033..54204 +
exon_6038_4exon_6038_4Tribonema minus UTEX_B_3156 exonContig_45 54747..54967 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6038CDS_6038Tribonema minus UTEX_B_3156 CDSContig_45 52810..52860 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166558Trimin1|166558|e_gw1.45.72.1Tribonema minus UTEX_B_3156 polypeptideContig_45 52810..54967 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6038 ID=mRNA_6038|Name=jgi.p|Trimin1|166558|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=669bp|location=Sequence derived from alignment at Contig_45:52810..54967+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGGCAACAGGCGATATGGTGCCGCCGCACATGGAGACCCACTGAG
GGGCCACGCCGACGGCGGCAAGGTGCTGGCGGACTTTGTGGAGTGGTGCG
TGGACGCGGGCGTGGCAGCACTTACCGTCTTTGCGTTCTCCACCGAGAAC
TGGCGGCGCGAGCGGCGCGAGGTGGACCTGCTGATGGACACGCTGTGCGA
GTACTGCGACAGGTTCCGGAAGGACGCAGTCGCGCGCAACGTGCGCATCC
GCGGCCTCATGACCTCGGCGCACAGGCTCCCGCCGTCCGTGCTCGAAGCG
GTGGCCAACGCGGAGCGGGACACAGCCGCGTGCACCGGTCTTGTCCTCAA
CATCTGCTTGAGCTATGGGGGGAGGGAGGAGCTGGCGGGCGCATGTCGCA
GGATAGCCGAGGACGTTCAGAGCGGCGCCATGGCTGCCTCCAGCATCGAC
GAGGACGCCATCCGCGACCGCCTGCTGACGCGCCACGTCGGCGACCCCGA
CGTCCTCATACGCACGTCCGGCGAGCGGCGCGTGAGCAACTTCCTCCTGT
TCCAGCTCGCGTACACGGAGCTCTTCTTCCTCGAGAAGCACTGGCCGGAG
GTGACGCGCGACGACCTGAGCGCCGTCTTCGACCAGTACCGCGCGCGGCG
GCGGCGGTACGGCCGCTGA
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protein sequence of jgi.p|Trimin1|166558

>Trimin1|166558|e_gw1.45.72.1 ID=Trimin1|166558|e_gw1.45.72.1|Name=jgi.p|Trimin1|166558|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=223bp
MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTEN
WRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEA
VANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSID
EDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPE
VTRDDLSAVFDQYRARRRRYGR*
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mRNA from alignment at Contig_45:52810..54967+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6038 ID=mRNA_6038|Name=jgi.p|Trimin1|166558|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2158bp|location=Sequence derived from alignment at Contig_45:52810..54967+ (Tribonema minus UTEX_B_3156 )
ATGGACGGCAACAGGCGATATGGTGCCGCCGCACATGGAGACCCACTGAG
GGTGCGTCTCAAGCTTTTTCAGTGGTACCAGCGTGCACAAGTCTCACTTG
CAGATGTGTGGTTTTGTTCATCATTGCTTGTGGGCAGGCTGATGCCGATC
AATGTGCCGTCATGTACTTTCATATAGTGCTCCCTCTGAAACGTCTGCAC
ATGTGTGCTCGCACATGCATCAATACCAACTCAATAGACATTGCGTGTAG
GCCTTGTGCAGTGCGCGACACAAGCAAGCACAGCAAAGCGTATGCGCAAC
AAGACATAAGCGCACGGCCGCCTGACGTGTGCGATCGCCTGCGCGCCCCC
CCCGCGCACTTACCGCGCACCGCTCGCCGCCTCTCCTGCGCACACATACA
GGGCCACGCCGACGGCGGCAAGGTGCTGGCGGACTTTGTGGAGTGGTGCG
TGGACGCGGGCGTGGCAGCACTTACCGTCTTTGCGTTCTCCACCGAGAAC
TGGCGGCGCGAGCGGCGCGAGGTGGACCTGCTGATGGACACGCTGTGCGA
GTACTGCGACAGGTTCCGGAAGGACGCAGTCGCGCGCAACGTGCGCATCC
GCGGCCTCATGACCTCGGCGCACAGGGTGAGCGCCATCGCGCGGCCGCGC
TCGGGCGACACAAGCTGATGCTTGGTGGCTTTGCCTGGTTCTTTGTGGAG
CTCGCACTTAGGGGAGAGGGCGAGAGCCGTGCATGTCGCTTGCGCGCTGC
GCCTCTCAGTGCTCACACCCGATGCGTGGCGTCGCCGCTGCGCGCGCCGC
CTATGCGCACAGCTTGCGCACCATCCAAGGCATTCGCATCGGGTGCGCGC
GCCGCTGACGGGCTACTAGCGCCACGTGGGCTTTGTGTTTTCTTGTGCTT
GTGTGACGCGACCGGAGCCGGGTAGTGCACACTTGTCAGCACGTGGCAGA
CGCACTCGAACCCGCACATTTAGTTGCCCACTCGAACCCGCACATTTAGT
TGCCTGGCGCTGGAGTATGGGAGGACCGCGAAAGTTTTGTAGTGTGTCGC
TGAGCTCTAGACTTCCTGAGCTGCGTGATGGAAGGCCCACTGTCAGCCAG
AGCACCACATCCGCTTCTTCTTGGTGCCAGGAGCTTGCAGGGTGCCCTGA
TGCGCACTCAATTGTTGAGCAGCAGCTGCACTCGCTGATGGCGCCGTTGA
ACTGTGCCGCTGCGCCTCTGCAGCTCCCGCCGTCCGTGCTCGAAGCGGTG
GCCAACGCGGAGCGGGACACAGCCGCGTGCACCGGTCTTGTCCTCAACAT
CTGCTTGAGCTATGGGGGGAGGGAGGAGCTGGCGGGCGCATGTCGCAGGA
TAGCCGAGGACGTTCAGAGCGGCGCCATGGCTGCCTCCAGCATCGGTGAG
GGCCGCGCATCACGTTTGGCGGCAGTTTCCGCATTTGAGCACTGCTGAAT
TGTGCGTCATGTTACAGTGTTCAGCAGATGAAACGGATCATGCCGGAACA
ATGCGGCAGTCATGGCTCAAATGCCGCAGCCCATTCTATACAGTCATGCG
TGTGCGATCCGCACCAAGGACGTCATGCACTCAGGCAGTACAGTAAGCGT
TCACGGAGTGTTTCTGCGCTCCGAACACGAGCGACCCTCTGCTGTGTCAG
GTGCGAGCGGCGGGCGTATAGAGCGCCCTTGCCAACCGCTTGGGCAAGAC
CGCTTTTCTTTCGATTACGTAAGCTCTAAACCACACACTTCACAACCGCG
GACGGGCTCCTCAGATTGCATGGGCGCCTCAGGTTGCGGGCTGAGACGCG
GACACTGAAAAAAACGAGTGCGCGGCCACACAAGCAGCAGGGACGCGTCC
CATCACATCGGGGGACAACAACTGAGTTCTCCTATTGATTCGCACGATTT
GTGCCGCATGCGCCGTACGGCTTCCCGCGCGCTGCAGACGAGGACGCCAT
CCGCGACCGCCTGCTGACGCGCCACGTCGGCGACCCCGACGTCCTCATAC
GCACGTCCGGCGAGCGGCGCGTGAGCAACTTCCTCCTGTTCCAGCTCGCG
TACACGGAGCTCTTCTTCCTCGAGAAGCACTGGCCGGAGGTGACGCGCGA
CGACCTGAGCGCCGTCTTCGACCAGTACCGCGCGCGGCGGCGGCGGTACG
GCCGCTGA
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Coding sequence (CDS) from alignment at Contig_45:52810..54967+

>mRNA_6038 ID=mRNA_6038|Name=jgi.p|Trimin1|166558|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=669bp|location=Sequence derived from alignment at Contig_45:52810..54967+ (Tribonema minus UTEX_B_3156 )
ATGGACGGCAACAGGCGATATGGTGCCGCCGCACATGGAGACCCACTGAG
GGGCCACGCCGACGGCGGCAAGGTGCTGGCGGACTTTGTGGAGTGGTGCG
TGGACGCGGGCGTGGCAGCACTTACCGTCTTTGCGTTCTCCACCGAGAAC
TGGCGGCGCGAGCGGCGCGAGGTGGACCTGCTGATGGACACGCTGTGCGA
GTACTGCGACAGGTTCCGGAAGGACGCAGTCGCGCGCAACGTGCGCATCC
GCGGCCTCATGACCTCGGCGCACAGGCTCCCGCCGTCCGTGCTCGAAGCG
GTGGCCAACGCGGAGCGGGACACAGCCGCGTGCACCGGTCTTGTCCTCAA
CATCTGCTTGAGCTATGGGGGGAGGGAGGAGCTGGCGGGCGCATGTCGCA
GGATAGCCGAGGACGTTCAGAGCGGCGCCATGGCTGCCTCCAGCATCGAC
GAGGACGCCATCCGCGACCGCCTGCTGACGCGCCACGTCGGCGACCCCGA
CGTCCTCATACGCACGTCCGGCGAGCGGCGCGTGAGCAACTTCCTCCTGT
TCCAGCTCGCGTACACGGAGCTCTTCTTCCTCGAGAAGCACTGGCCGGAG
GTGACGCGCGACGACCTGAGCGCCGTCTTCGACCAGTACCGCGCGCGGCG
GCGGCGGTACGGCCGCTGA
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