mRNA_6037 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A836CCU3_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU3_9STRA) HSP 1 Score: 774 bits (1999), Expect = 1.890e-274 Identity = 522/523 (99.81%), Postives = 522/523 (99.81%), Query Frame = 1 Query: 1 MSGADQRDQGGHGAVDQFSDDEEQQYYLQDGVNRDPEEVDPDDDSEEEGCYEIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPNKYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALAADDGSAXXXXXXEEGGADA 1569 MSGADQRDQGGHGAVDQFSDDEEQQYYLQDGVNRDPEEVDPDDDSEEEGCYEIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPNKYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALAADDGSA XXXXXEEGGADA Sbjct: 1 MSGADQRDQGGHGAVDQFSDDEEQQYYLQDGVNRDPEEVDPDDDSEEEGCYEIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPNKYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALAADDGSAAXXXXXEEGGADA 523
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A6H5K110_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K110_9PHAE) HSP 1 Score: 370 bits (950), Expect = 1.190e-116 Identity = 235/465 (50.54%), Postives = 296/465 (63.66%), Query Frame = 1 Query: 154 EIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAH----------KRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPNKYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALAAD 1518 E+P+E KTPV ++ G+LGAGKTTLVNYILKEQR++KI VIENE+GAVSID DLV ENVRE+EDIV MDNGCVCCTVRGDLVK L+ F ++ FD ILLETTG+ADPSPIV+TFN D D+ YRVDS++C+VDAK+I +QL R ++ G VNEA QQLAFAD +++NKTDLVS+EEL+ K+ I+ VNAFA++++ +KSR P+K +L L S+NLERTLELLE E XXXXXXXXXXXXXXXXXXXXXXX A+ R L +V +TRH++KVGS+GLTL G+LDV +FN+FM + + +A+++R KGVL+F Q KYVFQGVHEQI CEP + W A G R SKIVFIG DLD ++I ++L+ + + Sbjct: 59 ELPEEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAVSIDTDLVEENVREAEDIVTMDNGCVCCTVRGDLVKALVNFLDRRDTFDCILLETTGIADPSPIVATFNQDMDVKANYRVDSVLCLVDAKNILRQLSR--TSQEPGAVNEAVQQLAFADSVIINKTDLVSEEELKTVKQKITSVNAFAKVVQAEKSRVPLKSVLNLRSYNLERTLELLEQEAKEEEARKKAAEEKDTKEAKQNADKVKGGHAHGCKDGSCGHDXXXXXXXXXXXXXXXXXXXXXXXDYGKENGEKRKRDDEGGENGVANGADGSKNAKKARKKELVTVSSTRHDSKVGSMGLTLSGNLDVDMFNKFMGEFLRENSANLFRSKGVLAFKDQERKYVFQGVHEQIDCEPAINGW------------------------AEGEERESKIVFIGLDLDNDYITESLKACIVPE 497
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A482SKX7_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKX7_9ARCH) HSP 1 Score: 301 bits (770), Expect = 5.160e-91 Identity = 240/450 (53.33%), Postives = 298/450 (66.22%), Query Frame = 1 Query: 154 EIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTK-VGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPN-KYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQAL 1497 E+P+ KTPV I+ G+LG+GKTTLVNYILKEQ KICVIENEFG V ID+DLV EN+ EDI+ MDNGCVCC++RGDLV+T + ++K FD IL+ETTG+ADPSPIV TFN + I D YR+DS++C+VD KHIG L P G +NEA +Q+AFADRI+LNK DLVS +EL+ ++ + +NAFA +I+T++SRAP+ Q+LGL+SF+LE+ +E+ XXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXX AA K+ HN V S+G T+ G LDV LFN FM L++ KAADM+R KGVL+FA Q + K+VFQGVHEQI P+ W D R SK+VFIG +LD E+++ +L Sbjct: 6 EVPEHEKTPVTIITGFLGSGKTTLVNYILKEQTSWKICVIENEFGEVPIDNDLVEENLAAREDIITMDNGCVCCSIRGDLVRTFSVLASRRKDFDCILIETTGVADPSPIVFTFNSNALIQDNYRIDSIVCLVDVKHIGIHLDEIKPD---GSINEAERQVAFADRIVLNKLDLVSADELDDVEERLRSMNAFATLIKTERSRAPLDQILGLNSFSLEKVVEV----------DPMVMEEDDPVDDHXXXXXXXXXXXXXXXXHCGXXAGXXXXXXXXXXXXXXXXXXXXXXXEEHXXDAXXXXXXXXXXEHAAKKKKKI--------HNLSLVSSVGFTIEGLLDVPLFNAFMTQLLQAKAADMFRTKGVLAFADQGDTKFVFQGVHEQINFGPSEKPWQDY------------------------ETRISKMVFIGKNLDYEYLKTSL 410
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: D8LLE3_ECTSI (cobW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE3_ECTSI) HSP 1 Score: 300 bits (767), Expect = 7.750e-91 Identity = 150/227 (66.08%), Postives = 188/227 (82.82%), Query Frame = 1 Query: 154 EIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAE 834 ++P+E KTPV ++ G+LGAGKTTLVNYILKEQR++KI VIENE+GAVSID +LV ENVRE+EDIV MDNGCVCCTVRGDLVK LL F ++ FD ILLETTG+ADPSPIV+TFN D D+ YRVDS++C+VDAK+I +QL R ++ G VNEA QQLAFAD +++NKTDLVS+EEL+ K+ I+ VNAFA++++ +KSR P+K +L L S+NLERTLELLE E Sbjct: 61 DLPEEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAVSIDTELVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFNQDMDVKANYRVDSVLCLVDAKNILRQLSR--TSQEPGAVNEAVQQLAFADSVIINKTDLVSEEELKTVKQKITSVNAFAKVVQAEKSRVPLKSVLNLRSYNLERTLELLEQE 285
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A7S3JV87_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV87_9STRA) HSP 1 Score: 290 bits (743), Expect = 4.280e-88 Identity = 175/454 (38.55%), Postives = 244/454 (53.74%), Query Frame = 1 Query: 172 KTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPN-KYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALAADDGSA 1530 KTP VI+ G+LGAGKTTLVN+ILKEQ +ICVIENEFG ++ID+ LVSEN+ ED++ MDNGC CC++RGDLV+TL K+K FD +LLETTGLADP+PI++T +Q I+D + +DS++C+ DAKHI Q L P G VNEA QQ+AF+DRI+LNKTDLVS+EEL+ K + +N FA I+ + +SR + Q++G+ SF++ + +EL A ++ + + + V S+G+++ G LDV FN FMA+L++ +AAD+YR KGVLSFAGQ + K+VFQGVHEQI P W PR SKIVFIG +LD++++ +++R L + D S+ Sbjct: 8 KTPFVIVTGFLGAGKTTLVNHILKEQSSKRICVIENEFGEINIDEKLVSENLASKEDLIQMDNGCACCSIRGDLVRTLGNLVAKRKQFDAVLLETTGLADPAPIIATIKSNQWIDDSFEIDSVVCLADAKHIKQHLDEVKPD---GAVNEAVQQVAFSDRIILNKTDLVSQEELDAIKAQVMTINHFAVILTSTRSRVDLDQIIGIHSFDVNKCVEL------------------------------------------------------------------------------DPVLFDEANAEEADRKKPRIHDL------SMVSSVGISVEGDLDVPKFNLFMAELLQTRAADLYRTKGVLSFAGQGDTKFVFQGVHEQINFGPAQSPWQP------------------------NEPRVSKIVFIGRNLDRKFLNESIRACLVSSDSSS 350
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A7S2GHV4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHV4_9STRA) HSP 1 Score: 290 bits (743), Expect = 5.830e-87 Identity = 224/461 (48.59%), Postives = 279/461 (60.52%), Query Frame = 1 Query: 139 EEGCYEIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPN-KYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALAAD 1518 E+ E+PD KTPV I+ G+LG+GKTTLVNYILK Q + +ICVIENEFG V+ID+ LVSEN+ EDIV MDNGC+CC+VRGDLV+TL +++ F ILLETTGLADP+PI++TFN D I D YR+DS++ +VD KH+ Q L P + VNEA QQ+AFADRI+LNK DLVS EL+ K I +N A ++ETQ+S + Q+L ++FNLE TLEL XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX XXXXXX H + +V S+G+ PGS+ V FN FM+ L++ KAAD+YR KGVLSF GQ N K+VFQGVHE I P+ W D + R S +VFIG +L+KE ++ L+ LAA+ Sbjct: 15 EDDLIEVPDSEKTPVTIVTGFLGSGKTTLVNYILKSQNEWRICVIENEFGEVNIDEGLVSENIAAKEDIVSMDNGCICCSVRGDLVRTLNTLISRRRDFQAILLETTGLADPAPIITTFNSDATIQDNYRIDSIVTLVDCKHVQQHLHEVKPDD---AVNEAVQQVAFADRIMLNKIDLVSPTELQEVKDEILSINHTATLVETQRSVVDLGQILNQNAFNLEHTLELDPDILIDDSEEEEEAECNDAACTEDHSXXXXXXXXXXXXXXXXXXXXXGENADKETPPAENXXXXXXXXXXXXXXQHSTEPKKXXXXXXXKHDLS-------------QVSSVGMKFPGSMQVDKFNMFMSTLLQAKAADLYRSKGVLSFKGQGNTKFVFQGVHENINFGPSSKPWGDDEE------------------------RVSTMVFIGRNLNKEELKAGLKACLAAE 435
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A1Y5HX51_OSTTA (PRLI-interacting factor L-like protein n=3 Tax=Ostreococcus TaxID=70447 RepID=A0A1Y5HX51_OSTTA) HSP 1 Score: 285 bits (728), Expect = 2.040e-85 Identity = 178/463 (38.44%), Postives = 239/463 (51.62%), Query Frame = 1 Query: 130 DSEEEGCYEIPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHN-TKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPN-KYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRALA 1512 D+ + C + KTPV I+ G+LGAGKTTLVN+IL+ LKI VIENEFGAVSIDD LVSEN++E ED++ MDNGCVCCTVRGDLV+ LL + K FD +++ETTGLADP+P+ TF ++ +I + YR+DS++C+ DAKH+ ++ + P G VNEA QQ+AFADRILLNK DLVS+EELE +K + VNA AE++ TQ S + +LG++SF+LE+TLE + + +H+ T V S+G+ + G LD NEFM +L++ A +MYR KGVL F GQ + K+VFQGVHEQI P W A PR +++VFIG +LD+ +E R LA Sbjct: 41 DTTQSPCEMSDETQKTPVTIVTGFLGAGKTTLVNHILRGDHGLKIAVIENEFGAVSIDDALVSENIKEKEDVISMDNGCVCCTVRGDLVRALLTLRDRGKKFDAVIIETTGLADPAPVAFTFFINPEIAEHYRIDSILCLADAKHVALHMEEEKPD---GAVNEAVQQVAFADRILLNKIDLVSEEELETLEKTLRSVNASAEVLRTQNSVVDLNVVLGVNSFSLEKTLET---------------------------------------------------------------------------------------------DPSFMDENKENKHDLTGVSSVGIAVEGELDFQAVNEFMMNLLQENALNMYRSKGVLCFEGQGDAKFVFQGVHEQINFGPAASTW------------------------AENEPRINRMVFIGRNLDRPALEAGFRACLA 383
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A7S4E3I3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3I3_9STRA) HSP 1 Score: 283 bits (724), Expect = 1.940e-84 Identity = 171/451 (37.92%), Postives = 242/451 (53.66%), Query Frame = 1 Query: 163 DEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHN-TKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPN-KYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRAL 1509 DE KTP I+ G+LGAGKTTL+NYIL EQRD +ICVIENEFG ++ID+ LVS N+ ED++ MDNGC CC++RGDLV+TL G K++ FD ++LETTGLADP+PI++T +Q I+D + +D+++C+ AKH+ L+ Q P G VNEA QQ+AF+D+ILLNK DLV+ +EL +K I ++N FAE+IE ++SR +K+++G++SF++E+ ++L P V H+ + V S G+++ G LDV FN FMA+L++ +AAD+YR KGVLSFAGQ + K+VFQGVHEQI P W G R SKIVFIG +LD++++ + + L Sbjct: 72 DEAKTPFTIITGFLGAGKTTLINYILTEQRDKRICVIENEFGEINIDEKLVSANMASKEDLIQMDNGCACCSIRGDLVRTLGGLVEKRQQFDAVMLETTGLADPAPIIATLKSNQWIDDNFAIDAVVCLASAKHVKAHLEEQKPD---GAVNEAVQQVAFSDKILLNKVDLVTPDELTAIRKDIRKINHFAEVIECERSRVDLKKIIGINSFDIEKCIDL-----------------------------------------------------------------------------------DPVLFKKTEGSEEPTSGKV---HDLSMVSSCGISVEGFLDVPKFNIFMAELLQTRAADLYRSKGVLSFAGQGDQKFVFQGVHEQIDFGPAQTQWQK------------------------GERRVSKIVFIGRNLDRKFLTEKIESCL 409
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: A0A7S2IJ00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJ00_9STRA) HSP 1 Score: 280 bits (715), Expect = 5.190e-84 Identity = 175/447 (39.15%), Postives = 233/447 (52.13%), Query Frame = 1 Query: 175 TPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTK-VGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQPN-KYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRAL 1509 TP+ ++ G+LGAGKTTLVNYIL+EQR+ KI V+ENEFGAV+IDD LV+E++ ED++ MDNGCVCC+VRGDL++TL + ++K FD ILLETTGLADP+P+V T + ++D YR+DS+IC+ D KH+ L + P G VNEA QQ+AFAD+ILLNK DLV+ EE E K + +N FA IIET+KSRAP++++LGL+SFN+E L+ KR HN + V S+G+ G+L FN FM DL+ +AAD+YR KG+LSF GQ + K+VFQGVHEQI P W + G R +K VFIG +LDK+ + + L L Sbjct: 8 TPITVITGFLGAGKTTLVNYILREQREWKIAVLENEFGAVAIDDGLVAESMDAPEDLITMDNGCVCCSVRGDLIRTLGQLAKRRKDFDAILLETTGLADPAPVVYTVQTNPKMSDHYRIDSIICLTDCKHVQLHLDEKKPD---GSVNEALQQVAFADKILLNKIDLVTPEEKEKLKARLKNINNFATIIETEKSRAPLEKILGLNSFNMESILDY----------------------------------------------------------------------------DPNFFDDPDEVGADGKKRKI---------HNIELVQSVGVQFKGNLHAQYFNMFMMDLLRERAADLYRTKGMLSFHGQGDQKFVFQGVHEQINFGPAKKPWEE------------------------GEERINKFVFIGKNLDKQELTKGLMECL 342
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Match: F0YCQ7_AURAN (CobW C-terminal domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCQ7_AURAN) HSP 1 Score: 273 bits (697), Expect = 2.390e-81 Identity = 173/454 (38.11%), Postives = 233/454 (51.32%), Query Frame = 1 Query: 154 EIPD-EVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTFNLDQDINDFYRVDSLICVVDAKHIGQQLQRQPPPEDVGKVNEAAQQLAFADRILLNKTDLVSKEELELAKKHISQVNAFAEIIETQKSRAPIKQLLGLSSFNLERTLELLEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHKRAAPLGSVVATRHNTKVGSIGLTLPGSLDVALFNEFMADLMERKAADMYRCKGVLSFAGQ-PNKYVFQGVHEQIVCEPTPHLWPDAVQDDADXXXXXXXXXXXXXXXAAGPPRHSKIVFIGYDLDKEWIEQALRRAL 1509 E PD KTP I+ G+LGAGKTTL+NYIL EQRD +ICVIENEFG ++ID+ LVSEN+ ED++ MDNGC CC++RGDLV+TL G K+ FD ++LETTGLADP+PI++T +Q I+D + +DS++C+ AKH+ L P G VNEA QQ+AF D++LLNK DLV+ EEL + +N FAEII ++S + +++G+SSF++ER EL K+ L + V S G+ + G LDV FN FMA+L++ +AAD+YR KGVLSFAGQ K+VFQGVHEQI P W Q D PR SKIVFIG +LD++++++ + L Sbjct: 6 EAPDGSAKTPFTIVTGFLGAGKTTLINYILTEQRDKRICVIENEFGEINIDEKLVSENMASKEDLIQMDNGCACCSIRGDLVRTLGGLVEKRTQFDAVMLETTGLADPAPIIATLKSNQWIDDNFVIDSVLCLASAKHVQSHLDEVKPE---GAVNEAVQQIAFCDKVLLNKVDLVNDEELAAITARVKTINHFAEIITCERSIVDLSKIVGVSSFDVERCTEL-------------------------------------------------------------------------------DPVLFGVEGAEGQKKVHDL---------SMVSSCGIAVEGFLDVPKFNMFMAELLQARAADLYRTKGVLSFAGQGAQKFVFQGVHEQIDFGPAKTEW----QKDE--------------------PRWSKIVFIGRNLDRKYLQEKVESCL 344 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349512 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6037 ID=mRNA_6037|Name=jgi.p|Trimin1|349512|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2274bp|location=Sequence derived from alignment at Contig_45:46678..52013- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGTGGTGCCGATCAGCGGGATCAAGGCGGCCATGGTGCTGTTGACCAback to top protein sequence of jgi.p|Trimin1|349512 >Trimin1|349512|estExt_Genemark1.C_Ctg_450010 ID=Trimin1|349512|estExt_Genemark1.C_Ctg_450010|Name=jgi.p|Trimin1|349512|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=524bp MSGADQRDQGGHGAVDQFSDDEEQQYYLQDGVNRDPEEVDPDDDSEEEGCback to top mRNA from alignment at Contig_45:46678..52013- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6037 ID=mRNA_6037|Name=jgi.p|Trimin1|349512|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5336bp|location=Sequence derived from alignment at Contig_45:46678..52013- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_45:46678..52013- >mRNA_6037 ID=mRNA_6037|Name=jgi.p|Trimin1|349512|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1572bp|location=Sequence derived from alignment at Contig_45:46678..52013- (Tribonema minus UTEX_B_3156 )back to top |