mRNA_6034 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349509
Unique Name	mRNA_6034
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349509 vs. uniprot
Match: A0A835YVR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVR4_9STRA)

HSP 1 Score: 1338 bits (3464), Expect = 0.000e+0
Identity = 916/916 (100.00%), Postives = 916/916 (100.00%), Query Frame = 1

Query:    1 MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSAPAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGGVANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDTGGCAFASVAPWPPPLPPSTEHAATPAXXXXXXXCACAASPRPQADLYAGAADAQLXXXXXXXXXXXXXXXXXXXXXXQLASVDDAGGAVVVTLASASASAADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQVAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAALAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVXXXXXXXXXXAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLSSALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRSDLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAPLTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVADEQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGAQGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSLSAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQAHTDLCAARLVSAFAAL 2748
            MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSAPAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGGVANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDTGGCAFASVAPWPPPLPPSTEHAATPAXXXXXXXCACAASPRPQADLYAGAADAQLXXXXXXXXXXXXXXXXXXXXXXQLASVDDAGGAVVVTLASASASAADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQVAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAALAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVXXXXXXXXXXAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLSSALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRSDLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAPLTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVADEQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGAQGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSLSAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQAHTDLCAARLVSAFAAL
Sbjct:    1 MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSAPAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGGVANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDTGGCAFASVAPWPPPLPPSTEHAATPAXXXXXXXCACAASPRPQADLYAGAADAQLXXXXXXXXXXXXXXXXXXXXXXQLASVDDAGGAVVVTLASASASAADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQVAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAALAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVXXXXXXXXXXAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLSSALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRSDLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAPLTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVADEQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGAQGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSLSAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQAHTDLCAARLVSAFAAL 916

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349509 vs. uniprot

BLAST of jgi.p|Trimin1|349509 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YVR4_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_45	contig	Contig_45:31442..36775 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349509\|estExt_Genemark1.C_Ctg_450007
Hectar predicted targeting category	other localisation
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-11_000770.1
TranscriptId	349831
Track	FilteredModels1
ProteinId	349509

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349509	gene_6034	Tribonema minus UTEX_B_3156	gene	Contig_45 31442..36775 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349509	Trimin1\|349509\|estExt_Genemark1.C_Ctg_450007	Tribonema minus UTEX_B_3156	polypeptide	Contig_45 31442..36637 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6034_1	exon_6034_1	Tribonema minus UTEX_B_3156	exon	Contig_45 31442..31455 +
exon_6034_2	exon_6034_2	Tribonema minus UTEX_B_3156	exon	Contig_45 31778..32052 +
exon_6034_3	exon_6034_3	Tribonema minus UTEX_B_3156	exon	Contig_45 32149..33521 +
exon_6034_4	exon_6034_4	Tribonema minus UTEX_B_3156	exon	Contig_45 33995..34278 +
exon_6034_5	exon_6034_5	Tribonema minus UTEX_B_3156	exon	Contig_45 34526..34582 +
exon_6034_6	exon_6034_6	Tribonema minus UTEX_B_3156	exon	Contig_45 34863..35330 +
exon_6034_7	exon_6034_7	Tribonema minus UTEX_B_3156	exon	Contig_45 35806..35848 +
exon_6034_8	exon_6034_8	Tribonema minus UTEX_B_3156	exon	Contig_45 36401..36775 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6034	CDS_6034	Tribonema minus UTEX_B_3156	CDS	Contig_45 31442..31455 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_6034	UTR3_6034	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_45 36638..36775 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_45:31442..36775+
coding sequence from alignment at Contig_45:31442..36775+

spliced messenger RNA

>mRNA_6034 ID=mRNA_6034|Name=jgi.p|Trimin1|349509|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2889bp|location=Sequence derived from alignment at Contig_45:31442..36775+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGTCCCTCAGCTGCAGCGGCAGGCTCGACATCCTGGATGCTCGGGA
GTTGGAGTGCCTGGACCTCTGCTGCCGCGCTGTGTGCGTGTTGCTGAGGA
ATGCTGGGCGTCTGTTGCTGGCAACACTGCCTACCGAGGACCTGTCTGCA
CCGGCAGCCGTGGAAACCATCTCCACTGACACGACTGTGATCGCAGGCAC
CGAGTGGCAGCTGCTAGATGGCCCCGCTGTCGTCTCGGTGTCACCGCTGA
CAGACACGCGCAGCCGAGTGCTCGTGCGGCGGCAGCCAGAGGGCGGCGGT
GTTGCAAACGCGCAGCGCGCGGCAGCCGGGCGTGCGCAGCTCACCGCGCA
TCCGCTCGGTCACCTGCGCACGCTGCTGCTCAGCAACTGCAGCGACTGCA
ACGTTGACGGACGTGTGCAGCTGCTGCTGACCCTGTGCGAGGACGACACA
GGCGGTTGCGCATTCGCGAGTGTCGCCCCGTGGCCGCCGCCGCTGCCACC
CTCCACAGAGCACGCCGCCACCCCTGCAGCCGCCGCCGCCGCAGTGGTAT
GCGCATGTGCAGCATCACCGCGACCGCAAGCTGACCTGTACGCGGGCGCC
GCCGACGCGCAGCTGCTGCTGTGCGCGCCAGGAGGAGTCCCGCGCTGCGC
GACGCCGCTGCCGGCGCGCGCCGTGGACGTCCAGCTCGCGAGCGTCGACG
ACGCCGGCGGCGCAGTCGTTGTCACCCTGGCCAGCGCCAGCGCCAGCGCC
GCTGACGCAGTAGAAGAAGCAGCGCAGCCGCCGTCGCAGCGCTGCGTGCA
CCTGCTGGCGTGCGACGAGCTGCAGCACGCGACTGTGGTGTCCTTTGACG
GCGCCAGCGCGGCGCACGTCGCGGACTTTCTGGGTACGGGGCGGCAGCAG
GTGGCCGTAGTGCCCGCGGGTGGCAAAGCGTCTCTCGCCGCGGTGGCCAA
GCACATTGTGGTGACGGATGGGTGGACGGTATGGCGCGACGGCAGTGCTC
AGCGCATCCCCTCGTCCGGCCACACGTACGTGCTCGCCACCACCACCTCT
GAGCCCACTGCGCCGTCTTCCAAGAAGCGTAAGAAGGGCAGAGCTGCTGG
CGCTGCCACGGATGGCGGCGGCGGCGGCAATGGCGGCGGCGCGGCGGACG
TCGGCGCCACCGCTACCGCCGCCGCTGCCGCAGACGGCGCAGGGGGAGAT
GGGCCTGAGGACGGCGGCGCTGCTGCGCCCTCAAAGAAAAAGCAGAAGAA
GCGCAGGGATATCGCGGCCGCAGGCGGTGTGCAGGAGCAGACTGGCGCTA
CTACTACTGGTGATGGCGCAGCTGCGGCCGTCGCTGGCGGCGAGGCTGAG
GGCGCCGCCGCCGCCGCCGCCGCAGCCGCCGCTGCAGCAGCAGCTGGAGC
GACAGCCAAGCACACGGGGCGAGAGCGGCGCCGCAACGCGCGCGCTCAGC
AGGACGCTGCGCAGCACAGGGCGGCGCAGCTGCAGGAGGTGGCGGCGGCG
CTCGCGGCGCTGGAGGCGACGGAGGCCGCCAGACTGGCGCACATGCGGCG
CGAGTGCGCGGCGAAGCGGCAGCTGCTCTGCGCCGGCGAGGGGCTGCTGG
CGGAGATGGCGGAGGCGGCGGCGGTGGCGGCGGCGGAGGCGGGGGCGGTT
GCGGGCGCACGTGAGCCGGCGGCGCTGTTCGCGCCCTTCACGGGCGACCT
GGTGCCGCTCTTCAGCAGCGCTCAACCCGCAGACACAATGCTCACGCAGC
ATCGCTCGGCGCCAGCGCCGCCCGGCGCGCCGCCTCCGCAGTGTCTCTCC
AGCGCCCTGCAGCTGGCTGCGGCCACTGCGGATTTCGATGCGGCGTCCGG
CACGCTGAGCATCTCGGCGCTCGTGAGGAATGCGTCGGCTGCTGCGCTCG
CGCGGCGCGTCTGTATCAGCGCTGCGCCCGCGATCGGCGCGTTGAGGAGT
GATCTGATGCTGCCGCCGGCTGCCGTCGACGCTCAGCATGGCTACTCGCT
GTGCGTCACGTCGGACGTCATCGCCACGCTCCGCCCCGGCGCCGCTGCGC
AGCTGCTGGCGACGGCGCGCGTGCCGCGGCGGCTGCTGCGCGGCGCACCG
CTCACGCTGCCGCTGCTGCTGCACTGCGCCGGCGGCAGCACCGCCGGCGG
CAGCGACACTCAGCACCCCCCGCAACGGCGCGCTGTCCCCTGCGGCAGCG
TCGCCGTCTCCGCGGCGGCGCTGGTGGGGCTCACGGACGCTGTGGCGGAT
GAACAAGCGCAGCACCCGCTGCCTCCGCTGGCCGCTGCGCCGCCGCCGCT
GCCGCCGCGGCACTGGCGCGCGGCGACGCTGGCGCTGCGCTCGCGCGCGC
GCGGCCTGACGGACCTGCCCTCGCAGCTCGGCGCGCTGTCGCGGGGCGCG
CAGGGGCGCCTGTTTGCGCTGCGCGCGCGGCTGGCGGCGCGGGTGCACTG
CCGCACGCTCGCCACCCTCAGGGTCCACGTCAAGGACGCTACGCTGCTGG
CACCGCTGCTTCAGGCCGTGCGGCAGCTGCTGCCTGCGGATGTCAGCTTG
AGCGCGCACCCCTGCGATGCGCGTCTGCTAGCCTTGGCGGCAGACGGCCT
GACCGGCATTGAGGCAGAGCTGCCGGGTGCACGCGCGGCGCCCGCTTCTG
GGGCGTACGACACCGGCGGCGGCGCGACGCGCAGCAGTGAGCGCCAGGCG
CACACCGACCTGTGCGCCGCGCGGCTGGTGTCTGCATTCGCCGCGCTGTA
GCTGGCGGCGTGTGCTTGGGTTGTATTTGGCTGTGTGCATATTGGCTGCA
CTTGTGCGGCAGATTGCAGCTGAACAGGGGCTCTGTTGCGAGTGAGTAGT
GACAGTTCCCTGGCATCGTGCCGATCTGAAATGAAATGC

protein sequence of jgi.p|Trimin1|349509

>Trimin1|349509|estExt_Genemark1.C_Ctg_450007 ID=Trimin1|349509|estExt_Genemark1.C_Ctg_450007|Name=jgi.p|Trimin1|349509|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=917bp
MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSA
PAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGG
VANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDT
GGCAFASVAPWPPPLPPSTEHAATPAAAAAAVVCACAASPRPQADLYAGA
ADAQLLLCAPGGVPRCATPLPARAVDVQLASVDDAGGAVVVTLASASASA
ADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQ
VAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTS
EPTAPSSKKRKKGRAAGAATDGGGGGNGGGAADVGATATAAAAADGAGGD
GPEDGGAAAPSKKKQKKRRDIAAAGGVQEQTGATTTGDGAAAAVAGGEAE
GAAAAAAAAAAAAAAGATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAA
LAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVAAAEAGAV
AGAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLS
SALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRS
DLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAP
LTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVAD
EQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGA
QGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSL
SAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQA
HTDLCAARLVSAFAAL*

mRNA from alignment at Contig_45:31442..36775+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6034 ID=mRNA_6034|Name=jgi.p|Trimin1|349509|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5334bp|location=Sequence derived from alignment at Contig_45:31442..36775+ (Tribonema minus UTEX_B_3156 )
ATGGGGTCCCTCAGGTCACCACTTCAACTAGAACTTGCCTCTCTGGGGTC
CTGGATCCTCGCCACAGCCTTGGCTTGCTGCTAGGCAGCGTATGAGAGGC
AAGGGCAAGAGGAGCGACAGCAGCAAAATCCTAGACGCCGCATCAGCCAC
TCTCTCCTGCTCTTCGATCTTTGTCACTGGCGGTGCCTTGGCGCAAGTCA
CTTGTGAAGCGAGCGACGGTACAGAGCCCCAATGCCCGCTGCAGCTGACC
ACAGCCCGATTCAACGACAACAAACACCGACTTTCCTCACATACTGCTCC
CCTGTGCTGCAAGCTGCCCGCTGCTCTCGCCGGCAGCTGCAGCGGCAGGC
TCGACATCCTGGATGCTCGGGAGTTGGAGTGCCTGGACCTCTGCTGCCGC
GCTGTGTGCGTGTTGCTGAGGAATGCTGGGCGTCTGTTGCTGGCAACACT
GCCTACCGAGGACCTGTCTGCACCGGCAGCCGTGGAAACCATCTCCACTG
ACACGACTGTGATCGCAGGCACCGAGTGGCAGCTGCTAGATGGCCCCGCT
GTCGTCTCGGTGTCACCGCTGACAGACACGCGCAGCCGAGTGCTCGTGCG
GCGGCAGCCAGGTGAAGCGTGGCATGAGACCACTTTTACACCGGAGAGCG
TGTGCACCCAAGATTCAGCCACATTGAGCACTGCCCTCTGGAGCCGCCGC
CCTGCAGAGGGCGGCGGTGTTGCAAACGCGCAGCGCGCGGCAGCCGGGCG
TGCGCAGCTCACCGCGCATCCGCTCGGTCACCTGCGCACGCTGCTGCTCA
GCAACTGCAGCGACTGCAACGTTGACGGACGTGTGCAGCTGCTGCTGACC
CTGTGCGAGGACGACACAGGCGGTTGCGCATTCGCGAGTGTCGCCCCGTG
GCCGCCGCCGCTGCCACCCTCCACAGAGCACGCCGCCACCCCTGCAGCCG
CCGCCGCCGCAGTGGTATGCGCATGTGCAGCATCACCGCGACCGCAAGCT
GACCTGTACGCGGGCGCCGCCGACGCGCAGCTGCTGCTGTGCGCGCCAGG
AGGAGTCCCGCGCTGCGCGACGCCGCTGCCGGCGCGCGCCGTGGACGTCC
AGCTCGCGAGCGTCGACGACGCCGGCGGCGCAGTCGTTGTCACCCTGGCC
AGCGCCAGCGCCAGCGCCGCTGACGCAGTAGAAGAAGCAGCGCAGCCGCC
GTCGCAGCGCTGCGTGCACCTGCTGGCGTGCGACGAGCTGCAGCACGCGA
CTGTGGTGTCCTTTGACGGCGCCAGCGCGGCGCACGTCGCGGACTTTCTG
GGTACGGGGCGGCAGCAGGTGGCCGTAGTGCCCGCGGGTGGCAAAGCGTC
TCTCGCCGCGGTGGCCAAGCACATTGTGGTGACGGATGGGTGGACGGTAT
GGCGCGACGGCAGTGCTCAGCGCATCCCCTCGTCCGGCCACACGTACGTG
CTCGCCACCACCACCTCTGAGCCCACTGCGCCGTCTTCCAAGAAGCGTAA
GAAGGGCAGAGCTGCTGGCGCTGCCACGGATGGCGGCGGCGGCGGCAATG
GCGGCGGCGCGGCGGACGTCGGCGCCACCGCTACCGCCGCCGCTGCCGCA
GACGGCGCAGGGGGAGATGGGCCTGAGGACGGCGGCGCTGCTGCGCCCTC
AAAGAAAAAGCAGAAGAAGCGCAGGGATATCGCGGCCGCAGGCGGTGTGC
AGGAGCAGACTGGCGCTACTACTACTGGTGATGGCGCAGCTGCGGCCGTC
GCTGGCGGCGAGGCTGAGGGCGCCGCCGCCGCCGCCGCCGCAGCCGCCGC
TGCAGCAGCAGCTGGAGCGACAGCCAAGCACACGGGGCGAGAGCGGCGCC
GCAACGCGCGCGCTCAGCAGGACGCTGCGCAGCACAGGGCGGCGCAGCTG
CAGGAGGTGGCGGCGGCGCTCGCGGCGCTGGAGGCGACGGAGGCCGCCAG
ACTGGCGCACATGCGGCGCGAGTGCGCGGCGAAGCGGCAGCTGCTCTGCG
CCGGCGAGGGGCTGCTGGCGGAGATGGCGGAGGCGGCGGCGGTGGCGGCG
GCGGAGGCGGGGGCGGTTGCGGGCGCACGTGTGAGTTATGCGCTGCGAAG
GCGTGAGATGCGCTGGCAGCATGTCAGATTCGGCGGCTGGTTGGCAACAA
TTCTTGCTTGCATGCAGACGCACGAAAGGGAGCGCTGCGGGGCATCACAG
CGTTGTTGCGTGGATGGCAGTGTGGGGCGCGCTGCAGACGTCTTGTCATG
CTTGCAGTAGTTGCACTTGATGCACCACTTTGGCGTGTCAGCAGCAGCGA
TGCGTGGAGCCGATGCATCGACGAAAACGAGGCAGCGGATGCGTGCTGAT
GACGTTCACTTACTCAAACACATTGCGAGTCACAGTCGTCGAAGCGTGTG
TGTGGGCACCATTACCCCCATTGCATCTATCTGCCTGTCATGACGTGCCT
GGCGTCTCCCCTGCCTCGATGTCGCAAAGTTCCACCTGGTCTGATGATGA
CCTCACAACGCTCGCGCTGCAACCCACCCACGCTACGACCGCGCGTCGCG
CAGGAGCCGGCGGCGCTGTTCGCGCCCTTCACGGGCGACCTGGTGCCGCT
CTTCAGCAGCGCTCAACCCGCAGACACAATGCTCACGCAGCATCGCTCGG
CGCCAGCGCCGCCCGGCGCGCCGCCTCCGCAGTGTCTCTCCAGCGCCCTG
CAGCTGGCTGCGGCCACTGCGGATTTCGATGCGGCGTCCGGCACGCTGAG
CATCTCGGCGCTCGTGAGGAATGCGTCGGCTGCTGCGCTCGCGCGGCGCG
TCTGTATCAGCGCTGCGCCCGCGATCGGCGCGTTGAGGTGAGGACTTGTG
TCTGGTGTCGTCGCGATGCGTGCGCGCGCGTTGTTTGTCGCCGCAGCGGC
CATGGCGCAGGTGGCGGCGGGAGCGGCTTGTGTGTACGTAGTTGAAAGCG
GGGCTGAGGCTGCCGCACTACGGTCTGCGTGCAGCGGCGGCTGGCGCTGA
AACGCGTCAAGCACATTGCATTGCGGCGACCCGCTTTGGCTGACGACAGC
GGGTGTGAGGCTTGCTGCCGCGTTTGTGCTGCAGGAGTGATCTGATGCTG
CCGCCGGCTGCCGTCGACGCTCAGCATGGCTACTCGCTGTGGTGAAACCT
CTCACAGATCCAGCCCTTTGCGTGTGCCGCCCTGCTGTGCCTTTCATGCA
CTCATGCCGCTGAGGCAGCGCGACCGCAGTACCAACTGTCTCACGTACGC
CTTCCAGCGATGCTGACGATGAGGAAGTACGATCCAGCAAACATGCTGCG
CGCCCAGTGTTTAAACAAAACCGCTGGAACTAACCGCAGCCATGCTCAAC
ATGCGCACAATGAACGCATTTCGCTGTGCCCGCCGACCTTGAACGCCATC
CACGTCGCGCTCTGCCCGCAGCGTCACGTCGGACGTCATCGCCACGCTCC
GCCCCGGCGCCGCTGCGCAGCTGCTGGCGACGGCGCGCGTGCCGCGGCGG
CTGCTGCGCGGCGCACCGCTCACGCTGCCGCTGCTGCTGCACTGCGCCGG
CGGCAGCACCGCCGGCGGCAGCGACACTCAGCACCCCCCGCAACGGCGCG
CTGTCCCCTGCGGCAGCGTCGCCGTCTCCGCGGCGGCGCTGGTGGGGCTC
ACGGACGCTGTGGCGGATGAACAAGCGCAGCACCCGCTGCCTCCGCTGGC
CGCTGCGCCGCCGCCGCTGCCGCCGCGGCACTGGCGCGCGGCGACGCTGG
CGCTGCGCTCGCGCGCGCGCGGCCTGACGGACCTGCCCTCGCAGCTCGGC
GCGCTGTCGCGGGGCGCGCAGGGGCGCCTGTTTGCGCTGCGCGCGCGGCT
GGCGGCGCGGGTGCACTGCCGCACGCTCGCCACCCTCAGGTGCGTGCCTA
GAGCGCGCATGGACGTACGTCATCGCGCTGCAAACGGCGGGTGCGCGGGC
GGGGGAGCAGTGCTGTGTCCATGCGCGATCGACAAGAGCCGCGTCGTGGC
GCCTGCAGCGGCTCTGTCGTCGCCCAGGCGGCACATCATGCTTGTGATCG
CGGTGCGCAGGGGAGTCTCGCGGCGTGGCACGCTGCAACGTCGGCAGCGC
AAACAGCACGTGCTCGCCTGCAAAGTGGCATCAGCGACGGCGTTTCCGCG
CACGGCCGCCCGCGCATGCGGCCGCTGCGCACCCCTTGCACAGCTGCAAG
CGGCCCGAGCGATGCGTGGGACAGCCGCAATGACGGCTGGCCGACGACTG
CTGCTCGACGGCGCCGCTGCACTCATGCACGTCCTTAACGAGGCAGCCCA
CCTGCAACTGCCTGCATTCGATGTTGCTGATCAGGCATGTCACTGCGTTG
TCGCTGCCGCGCAGGGTCCACGTCAAGGACGCTACGCTGCTGGCACCGCT
GCTTCAGGTGATGGCGACTCATCGGTGGCTGTAGGTACCAGCATGCTTCG
TTTCTTGTGTCGCTTACTCCCGCGTGTACCGCAATACCTCACAAGTACTT
TGAATGTTGAACAAGGTCGCAACTTTGTCCTGCGCTGTGATGGTGTACTG
GCATGTCACTCAGCGAAGAGGGGACTGCAAGCATGGCACTTCAAATCACG
CCGCAGCAGCATGGCAATGAGGTTTGTCGTAGCTTTCACAGTCCTGAGGA
GTCTCTCATCACAGCAACAGGTGCTGGTGTGGCTAGACGTCACATTGCGA
GCCTTCGCGCAATGATGAGCGTTGAGGCGCTTGACGGGCAATGCGTGCTT
GACATCATGCACAGGCGATGTGCGCTGACTGCTTGTCAAGGCCATGCCGG
ACCTCCTGCCTACGTTACCCGGCATGCGGCTCACTCGAAATAGTTGCTCG
AGTGCCTGCACCGCTGGCCGCCGCACCAGCGCGCAGCGTCGTGCCACCGA
TGACGACGGCGCGCTGCCGCCCTGGGCTGACGACCGCGTCGTGATCTGTT
CCGCTGCAGGCCGTGCGGCAGCTGCTGCCTGCGGATGTCAGCTTGAGCGC
GCACCCCTGCGATGCGCGTCTGCTAGCCTTGGCGGCAGACGGCCTGACCG
GCATTGAGGCAGAGCTGCCGGGTGCACGCGCGGCGCCCGCTTCTGGGGCG
TACGACACCGGCGGCGGCGCGACGCGCAGCAGTGAGCGCCAGGCGCACAC
CGACCTGTGCGCCGCGCGGCTGGTGTCTGCATTCGCCGCGCTGTAGCTGG
CGGCGTGTGCTTGGGTTGTATTTGGCTGTGTGCATATTGGCTGCACTTGT
GCGGCAGATTGCAGCTGAACAGGGGCTCTGTTGCGAGTGAGTAGTGACAG
TTCCCTGGCATCGTGCCGATCTGAAATGAAATGC

Coding sequence (CDS) from alignment at Contig_45:31442..36775+

>mRNA_6034 ID=mRNA_6034|Name=jgi.p|Trimin1|349509|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2751bp|location=Sequence derived from alignment at Contig_45:31442..36775+ (Tribonema minus UTEX_B_3156 )
ATGGGGTCCCTCAGCTGCAGCGGCAGGCTCGACATCCTGGATGCTCGGGA
GTTGGAGTGCCTGGACCTCTGCTGCCGCGCTGTGTGCGTGTTGCTGAGGA
ATGCTGGGCGTCTGTTGCTGGCAACACTGCCTACCGAGGACCTGTCTGCA
CCGGCAGCCGTGGAAACCATCTCCACTGACACGACTGTGATCGCAGGCAC
CGAGTGGCAGCTGCTAGATGGCCCCGCTGTCGTCTCGGTGTCACCGCTGA
CAGACACGCGCAGCCGAGTGCTCGTGCGGCGGCAGCCAGAGGGCGGCGGT
GTTGCAAACGCGCAGCGCGCGGCAGCCGGGCGTGCGCAGCTCACCGCGCA
TCCGCTCGGTCACCTGCGCACGCTGCTGCTCAGCAACTGCAGCGACTGCA
ACGTTGACGGACGTGTGCAGCTGCTGCTGACCCTGTGCGAGGACGACACA
GGCGGTTGCGCATTCGCGAGTGTCGCCCCGTGGCCGCCGCCGCTGCCACC
CTCCACAGAGCACGCCGCCACCCCTGCAGCCGCCGCCGCCGCAGTGGTAT
GCGCATGTGCAGCATCACCGCGACCGCAAGCTGACCTGTACGCGGGCGCC
GCCGACGCGCAGCTGCTGCTGTGCGCGCCAGGAGGAGTCCCGCGCTGCGC
GACGCCGCTGCCGGCGCGCGCCGTGGACGTCCAGCTCGCGAGCGTCGACG
ACGCCGGCGGCGCAGTCGTTGTCACCCTGGCCAGCGCCAGCGCCAGCGCC
GCTGACGCAGTAGAAGAAGCAGCGCAGCCGCCGTCGCAGCGCTGCGTGCA
CCTGCTGGCGTGCGACGAGCTGCAGCACGCGACTGTGGTGTCCTTTGACG
GCGCCAGCGCGGCGCACGTCGCGGACTTTCTGGGTACGGGGCGGCAGCAG
GTGGCCGTAGTGCCCGCGGGTGGCAAAGCGTCTCTCGCCGCGGTGGCCAA
GCACATTGTGGTGACGGATGGGTGGACGGTATGGCGCGACGGCAGTGCTC
AGCGCATCCCCTCGTCCGGCCACACGTACGTGCTCGCCACCACCACCTCT
GAGCCCACTGCGCCGTCTTCCAAGAAGCGTAAGAAGGGCAGAGCTGCTGG
CGCTGCCACGGATGGCGGCGGCGGCGGCAATGGCGGCGGCGCGGCGGACG
TCGGCGCCACCGCTACCGCCGCCGCTGCCGCAGACGGCGCAGGGGGAGAT
GGGCCTGAGGACGGCGGCGCTGCTGCGCCCTCAAAGAAAAAGCAGAAGAA
GCGCAGGGATATCGCGGCCGCAGGCGGTGTGCAGGAGCAGACTGGCGCTA
CTACTACTGGTGATGGCGCAGCTGCGGCCGTCGCTGGCGGCGAGGCTGAG
GGCGCCGCCGCCGCCGCCGCCGCAGCCGCCGCTGCAGCAGCAGCTGGAGC
GACAGCCAAGCACACGGGGCGAGAGCGGCGCCGCAACGCGCGCGCTCAGC
AGGACGCTGCGCAGCACAGGGCGGCGCAGCTGCAGGAGGTGGCGGCGGCG
CTCGCGGCGCTGGAGGCGACGGAGGCCGCCAGACTGGCGCACATGCGGCG
CGAGTGCGCGGCGAAGCGGCAGCTGCTCTGCGCCGGCGAGGGGCTGCTGG
CGGAGATGGCGGAGGCGGCGGCGGTGGCGGCGGCGGAGGCGGGGGCGGTT
GCGGGCGCACGTGAGCCGGCGGCGCTGTTCGCGCCCTTCACGGGCGACCT
GGTGCCGCTCTTCAGCAGCGCTCAACCCGCAGACACAATGCTCACGCAGC
ATCGCTCGGCGCCAGCGCCGCCCGGCGCGCCGCCTCCGCAGTGTCTCTCC
AGCGCCCTGCAGCTGGCTGCGGCCACTGCGGATTTCGATGCGGCGTCCGG
CACGCTGAGCATCTCGGCGCTCGTGAGGAATGCGTCGGCTGCTGCGCTCG
CGCGGCGCGTCTGTATCAGCGCTGCGCCCGCGATCGGCGCGTTGAGGAGT
GATCTGATGCTGCCGCCGGCTGCCGTCGACGCTCAGCATGGCTACTCGCT
GTGCGTCACGTCGGACGTCATCGCCACGCTCCGCCCCGGCGCCGCTGCGC
AGCTGCTGGCGACGGCGCGCGTGCCGCGGCGGCTGCTGCGCGGCGCACCG
CTCACGCTGCCGCTGCTGCTGCACTGCGCCGGCGGCAGCACCGCCGGCGG
CAGCGACACTCAGCACCCCCCGCAACGGCGCGCTGTCCCCTGCGGCAGCG
TCGCCGTCTCCGCGGCGGCGCTGGTGGGGCTCACGGACGCTGTGGCGGAT
GAACAAGCGCAGCACCCGCTGCCTCCGCTGGCCGCTGCGCCGCCGCCGCT
GCCGCCGCGGCACTGGCGCGCGGCGACGCTGGCGCTGCGCTCGCGCGCGC
GCGGCCTGACGGACCTGCCCTCGCAGCTCGGCGCGCTGTCGCGGGGCGCG
CAGGGGCGCCTGTTTGCGCTGCGCGCGCGGCTGGCGGCGCGGGTGCACTG
CCGCACGCTCGCCACCCTCAGGGTCCACGTCAAGGACGCTACGCTGCTGG
CACCGCTGCTTCAGGCCGTGCGGCAGCTGCTGCCTGCGGATGTCAGCTTG
AGCGCGCACCCCTGCGATGCGCGTCTGCTAGCCTTGGCGGCAGACGGCCT
GACCGGCATTGAGGCAGAGCTGCCGGGTGCACGCGCGGCGCCCGCTTCTG
GGGCGTACGACACCGGCGGCGGCGCGACGCGCAGCAGTGAGCGCCAGGCG
CACACCGACCTGTGCGCCGCGCGGCTGGTGTCTGCATTCGCCGCGCTGTA
G