mRNA_5979 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164861
Unique NamemRNA_5979
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A835YZE2_9STRA (Trimeric LpxA-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE2_9STRA)

HSP 1 Score: 486 bits (1250), Expect = 1.850e-173
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 
Query:    1 MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV 732
            MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV
Sbjct:    1 MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV 244
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A1E7EZU7_9STRA (Gamma carbonic anhydrase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EZU7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 5.030e-41
Identity = 86/201 (42.79%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:  130 VARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSS-IHVGGLSSVGDKTVINTVAK---LSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKK 720
            ++RHRP M   G+AP     + F+AP ASV+G+V   D +++WYGAV+R D S  I +G  SSVG+ +V+ T+ K   LSTGFP    IG+YV I  GC L SC V D   IG    + EG+I+E   +L PG      S +PS Q WGGNPAQ+V ++ +D   N K  +      ++EH+ EF P    + H EDL  K
Sbjct:   30 ISRHRPQMTFLGQAPFVT-NDTFIAPTASVIGEVTNWDQSSVWYGAVVRADSSHPITIGFTSSVGEGSVVTTLKKNATLSTGFPPVTHIGHYVTIGSGCVLKSCRVDDLVVIGEKCTILEGSIVESNVMLEPGTVIPPYSYIPSGQKWGGNPAQFVANLTTDETENIKKISLEIHQKAKEHLLEFLPVGNTYVHLEDLELK 229
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S4JY93_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JY93_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.530e-39
Identity = 83/201 (41.29%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:  136 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSS-IHVGGLSSVGDKTVINT----VAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKG 723
            RHRP +I NG  P +   + F+AP ASV+GDV   D +++W+GAV+R D    I +G  S+V D+ V+NT    V  + TGFP    +G+YV +  G  L SC V D  +IG    + EGAI+E + IL  G      + +PS Q WGGNPA+++ +++SD     K +AER  + + EH  EF P    + H EDL KKG
Sbjct:   31 RHRPKVIFNGIKPFET-NDTFIAPTASVIGDVTNWDESSVWFGAVVRADSGHPITIGFSSNVQDRAVLNTLPASVENMETGFPPICHVGHYVSVGAGSVLVSCRVEDIVDIGEKCTIMEGAIVEGEVILEAGTVVPPYARIPSGQRWGGNPAKFISNLNSDEKGGIKAKAERIHITASEHQVEFLPVGSTYLHLEDLEKKG 230
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A6U3QAK0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QAK0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 6.070e-39
Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:  136 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINT----VAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGI 726
            RHRP M+  G  P K   + F+AP+ASV+G+V   D +++WYGAV+R D   I +G  S++ D+ V+NT    V  L +GFP    +G+YV +  G  L SC V D  +IG    + EGA++E   IL PG      + +PS Q WGGNPAQ++ ++++D  A  + +AE     + EH  EF P    + H E+L KKG+
Sbjct:   32 RHRPNMMFWGVKPFKT-NDTFIAPSASVIGNVTNWDESSVWYGAVVRADAHPITIGFSSNIQDRAVLNTLPSSVKGLQSGFPPVCHVGHYVSVGAGSVLVSCRVEDLVDIGEKCTIMEGALVESNVILEPGTVVPAYARIPSGQRWGGNPAQFIANLNADEKAAIETKAEEIHQQAREHNVEFLPYGNTYVHLEELEKKGV 231
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A087SU61_AUXPR (Gamma carbonic anhydrase-like 1, mitochondrial n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SU61_AUXPR)

HSP 1 Score: 143 bits (361), Expect = 3.200e-38
Identity = 79/192 (41.15%), Postives = 114/192 (59.38%), Query Frame = 1 
Query:  136 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDL 711
            R R L+ L  + P     + +VAP+A V+GDVDL D  +IWYGAVLRGD ++I VG  S+V D+TVI+  +   TG PA   IG+YV + +GC L S  + DQ  +G   V+ EG+++E+QS+L PGXXX       + ++W GNPA++V  +  D  A     A       ++H +EF P + A+  AE L
Sbjct:   50 RQRQLIPLGNRVPSLA-PDAWVAPSAVVIGDVDLYDQASIWYGAVLRGDLNTIKVGAFSNVQDRTVIHAASSSPTGLPAATTIGHYVTVGQGCLLRSVTLEDQVVVGDRCVLLEGSLVERQSVLAPGXXXXXXXXXXAGELWAGNPARFVRKLSRDEAAGIVPLANSMAPAVDQHASEFTPVSFAYAEAEAL 240
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S3GN43_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN43_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.610e-37
Identity = 87/191 (45.55%), Postives = 109/191 (57.07%), Query Frame = 1 
Query:  133 ARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAE 705
            +RHR +M L  K P       FVAPNASVVGDV L D  +IWYGAVLRGDK+ I VG L++V D+ VI+TVA L+TGFPA V IG+ V I  G  +TS  +G++  +G+GS++ EGA           XXX       S Q+W GNPA YV DV  +     K  AE    +   H  EF P    +  AE
Sbjct:   37 SRHRAVMNLYDKRPIIAAGG-FVAPNASVVGDVLLFDEVSIWYGAVLRGDKNKIKVGRLTNVQDRAVISTVANLNTGFPANVEIGDSVTIGHGALITSATIGNRVLVGQGSIIQEGAEXXXXXXXXXXXXXXXXXXXXSNQLWAGNPAVYVRDVTDEESVGIKKSAEHYAEVGRTHGEEFLPFGTTYQAAE 226
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S1CBV1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBV1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.050e-37
Identity = 77/188 (40.96%), Postives = 115/188 (61.17%), Query Frame = 1 
Query:  133 ARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFT 696
            ARHRP+  L  K P  +  N FVAP+A+V+G V ++  +++WYGAV+RGD +++ +GG SS+GD+ V++T   +     A   IG+YV +  G  L SC + +   IG G+VV EGA++         XXX  G  +PS Q+W GNPAQ+V ++  + +A F+ +AE    L  EH +EF PA  A+T
Sbjct:   57 ARHRPVQNLYEKHPEVE-NNVFVAPSATVIGHVQILHKSSVWYGAVVRGDVNAVEIGGYSSIGDRAVVSTTKSVEGRPAATCRIGDYVTVGPGALLQSCTIENGVKIGAGAVVMEGALVXXXXXXXXXXXXXXGRRIPSGQLWAGNPAQFVRNLTKEELATFEGDAEFVADLGGEHAHEFLPAGGAYT 243
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A1Z5JC59_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JC59_FISSO)

HSP 1 Score: 136 bits (343), Expect = 2.070e-36
Identity = 78/196 (39.80%), Postives = 114/196 (58.16%), Query Frame = 1 
Query:  151 MILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINT--VAKLS-TGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGIT 729
            M   G+ P +   + F+AP+ASV+G+V   D +T+WY AV+R D   I +G  SSVG+ TVI T  V +L  TGFP +  IG+YV I  GC L SC + D  ++G   V+ EG+++E   IL PG        +PS Q WGGNPA YVG++  +   +   EA      ++EH+ EF P   ++ H ED+ K+ ++
Sbjct:    1 MTFRGQKPFQT-NDTFIAPSASVIGNVTNWDQSTVWYKAVVRADTHPITIGFSSSVGEGTVITTLNVEELEETGFPPETHIGHYVTIGAGCILKSCRIDDMVSVGDKCVILEGSLVENNVILEPGTVVMPYQRIPSGQKWGGNPAAYVGELTPEEKEHIPAEALHVHEQAKEHLVEFLPYGYSYVHLEDVEKEQLS 195
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BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: B7GE20_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GE20_PHATC)

HSP 1 Score: 136 bits (343), Expect = 2.250e-36
Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 1 
Query:  151 MILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKS-SIHVGGLSSVGDKTVINTVA---KLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKK 720
            M   GK P     + F+AP+ASV+GDV   D +++WY AV+R D   SI +G  SSVG+ TV+NT++   +L TG P    IG+YV +  GC L SC V D   +G    + EG+++E   IL PG        +PS Q+W GNPA +V ++  D   + + +A + F  ++EH+ EF P    F H E+L K+
Sbjct:    1 MTFLGKVPFVT-NDTFIAPSASVIGDVTNWDQSSVWYKAVVRADSEHSITIGFCSSVGEGTVVNTLSSTGQLETGLPPDTYIGHYVTVGAGCVLKSCRVDDLVVVGDKCTILEGSLVENHVILKPGTVVMPYQRIPSGQMWAGNPAAFVSELTPDEKEDIQQQALKIFTSTKEHILEFLPYGRTFVHLEELEKQ 193
[Close]
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S3PVX1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVX1_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.050e-36
Identity = 80/201 (39.80%), Postives = 115/201 (57.21%), Query Frame = 1 
Query:  136 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINT----VAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGI 726
            RHRP M+L G  P K   + F+AP+ASV+G+V   D +++WYGAV+R D   I +G  SSV D+ V+ T    V  + +GFP    IG+YV +  G  LTSC + D   IG   ++ EGA           XXX   + +PS Q W GNPA +V ++D ++  + K  AE+  L ++EH  EF P   ++ H E+L KKG+
Sbjct:   31 RHRPSMMLMGNKPFKT-NDTFIAPSASVIGNVTNWDESSVWYGAVVRADSHPITIGFSSSVQDRAVVTTLSPKVQNMKSGFPPVCHIGHYVSVGAGSILTSCRIEDLVEIGEKCIIEEGAXXXXXXXXXXXXXXPAYTQIPSGQRWAGNPATFVEELDEEAREHIKAAAEKTHLQAQEHALEFLPYGNSYVHLEELEKKGV 230
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZE2_9STRA1.850e-173100.00Trimeric LpxA-like protein n=1 Tax=Tribonema minus... [more]
A0A1E7EZU7_9STRA5.030e-4142.79Gamma carbonic anhydrase n=1 Tax=Fragilariopsis cy... [more]
A0A7S4JY93_9STRA1.530e-3941.29Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U3QAK0_9STRA6.070e-3939.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A087SU61_AUXPR3.200e-3841.15Gamma carbonic anhydrase-like 1, mitochondrial n=2... [more]
A0A7S3GN43_9STRA1.610e-3745.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1CBV1_9STRA2.050e-3740.96Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1Z5JC59_FISSO2.070e-3639.80Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7GE20_PHATC2.250e-3639.18Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3PVX1_9STRA4.050e-3639.80Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:707376..713147 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164861|e_gw1.33.16.1
Descriptioncarbonate dehydratase activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0663@1|root,2QTES@2759|Eukaryota
Evalue3.45e-40
Seed ortholog157072.XP_008871299.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioncarbonic anhydrase
Ec32 orthologEc-07_004610.1
TranscriptId165183
TrackFilteredModels1
ProteinId164861
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164861gene_5979Tribonema minus UTEX_B_3156 geneContig_33 707376..713147 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164861Trimin1|164861|e_gw1.33.16.1Tribonema minus UTEX_B_3156 polypeptideContig_33 707376..713147 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5979_5exon_5979_5Tribonema minus UTEX_B_3156 exonContig_33 707376..707483 -
exon_5979_4exon_5979_4Tribonema minus UTEX_B_3156 exonContig_33 709002..709150 -
exon_5979_3exon_5979_3Tribonema minus UTEX_B_3156 exonContig_33 710723..710850 -
exon_5979_2exon_5979_2Tribonema minus UTEX_B_3156 exonContig_33 711584..711636 -
exon_5979_1exon_5979_1Tribonema minus UTEX_B_3156 exonContig_33 712851..713147 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5979CDS_5979Tribonema minus UTEX_B_3156 CDSContig_33 712851..713147 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5979 ID=mRNA_5979|Name=jgi.p|Trimin1|164861|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_33:707376..713147- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCACCAGCTTTGCGACACACTGCCTTGCTCGCAGCTGCAATTTGC
CAAATGCCTGCTGCATCGCTCTTCCTGCTTGTTTCCTGAGCCAAGAAACT
CTCGGACATTATGCTCGCTGTCCCTCGCAGTCGCTCGCCACCGACCCCTC
ATGATCCTCAATGGCAAGGCACCCAGGAAGGACTTTGAAAACTGCTTCGT
GGCTCCCAATGCATCCGTGGTTGGGGATGTAGATTTGGTGGATATGACAA
CTATCTGGTATGGGGCTGTGCTGCGCGGAGATAAGAGCTCCATACATGTG
GGCGGGCTGAGCAGCGTGGGCGACAAGACCGTCATCAACACTGTTGCCAA
GCTGAGCACTGGCTTCCCCGCCAAGGTGGTCATTGGCAACTACGTGGTGA
TTGAGGAGGGGTGCTCGCTGACGTCGTGCATGGTGGGCGACCAGTGCAAT
ATCGGCAGGGGGAGCGTCGTCTGCGAAGGTGCCATCATGGAGAAGCAGAG
TATTCTGCTGCCGGGCAGCGTCCTCACCACCGGCAGCCTGGTGCCTTCGC
GCCAGATCTGGGGGGGCAACCCGGCGCAGTATGTTGGCGACGTCGACTCC
GACAGCGTTGCAAACTTCAAAGATGAGGCGGAGCGGCAATTCCTCCTCTC
GGAGGAGCACGTCAACGAATTCAACCCCGCCAACATGGCCTTCACGCACG
CCGAGGATCTTGCAAAGAAAGGCATCACTGTCTAG
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protein sequence of jgi.p|Trimin1|164861

>Trimin1|164861|e_gw1.33.16.1 ID=Trimin1|164861|e_gw1.33.16.1|Name=jgi.p|Trimin1|164861|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPL
MILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHV
GGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCN
IGRGSVVCEGAIMEKQSILLPGSVLTTGSLVPSRQIWGGNPAQYVGDVDS
DSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV*
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mRNA from alignment at Contig_33:707376..713147-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5979 ID=mRNA_5979|Name=jgi.p|Trimin1|164861|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5772bp|location=Sequence derived from alignment at Contig_33:707376..713147- (Tribonema minus UTEX_B_3156 )
ATGCCGCACCAGCTTTGCGACACACTGCCTTGCTCGCAGCTGCAATTTGC
CAAATGCCTGCTGCATCGCTCTTCCTGCTTGTTTCCTGAGCCAAGAAACT
CTCGGACATTATGCTCGCTGTCCCTCGCAGTCGCTCGCCACCGACCCCTC
ATGATCCTCAATGGCAAGGCACCCAGGAAGGACTTTGAAAACTGCTTCGT
GGCTCCCAATGCATCCGTGGTTGGGGATGTAGATTTGGTGGATATGACAA
CTATCTGGTATGGGGCTGTGCTGCGCGGAGATAAGAGCTCCATACATGTG
AGTGCAAGATGCTCTGCTGCAGTATCGGATAGACGTCTATGCCATTTGTG
ACAATCCTCAAGTTTCCTCTGCACGTCTAGTGTAGTGCAGGCTGCACTGA
CTGTAGCTCGCTCTGCTGTCATCATCAAAGGCAGATCAGAATCAAATGCC
GCAGTAAACTAGCCCATGATTTATGCACTGCAGCGATATATTCTCACAAG
GCCCCATGCTCCTGTCAGGCTGCGGGAGTGCGCAGATGCGTCCGCCCAGC
GCGCAGCAAGCTACGCACACACATCTTTAGCATTCCCATTTGTGTCGCAT
CAGCACAACTGCAACTGCAATATGCACGGCCCCATCTGCGCGGTACGGTG
CCCCTACCCAATATCATACGAGACATGCATGAAATGTCCCGTTTCTGAGT
ACCGACTTGGGGTTAGGGTTGAACTAGCCCTAAGGTCAGGGTTTGGCTAA
CCCTCAGGGCCACGATCTTCTGCTAGTACGATACGTCCGCTGTCATTAAC
ATATTGAACTGTGAAGTGGTAAGACATGCGGCTGCCTGCGCAACGAAAGA
AAAACATAACGCGTAAGACAGACGAAGGTTCAAACACGTGAATGATTCAA
GTACTTGCGTGCTCAGGCGGCGACTGTGCAGCATGCACACAGGAGAGGGC
AACAGTACCATCATCAACTTGCATGTTGGTTCGATGTAGTGTTCTCTTGC
GCACTTGAATGTACGGCTGCTGTGCTGATGAGCACACCGGTGGCACCAGG
GTCACCTGATGAAAGCTGGGAAAGTAGTGCCGGTTTGCCGAATCATGTCT
GGGCGAACACTGTGCAGCAAACACGCAGAGCTTGCTGCATCGATCATGCT
TTCAATTTCAACTAACATCCACTCTCATTTGTCATTGCGCGCGGTGACGT
GCCTGTGCTTGCTGTTTGCTGAGGTGAGCGGGCTGCGCAGTGTGCTCAGC
AAGACCGTTATCACCGATGCTGTCACAATGTTCAACTCTCACTTCCCCAA
TTGTGCGGTGACGTGCCTTGGCAAATGGAGCACCGTAGACAGCAAAACTG
CCATTAACATTCAATGCTGTCTCAATGTTCAACTCTCACTTCTTCCACAT
GCGCGGTGACGTGCCTACGCAGGTGGGCGGGCTGCAGTGTGGTCGATTCG
AATATTGGCTCAAAGTTCAACTCTGACCTGTCCTATTGCGCCCGGTGACG
TGCCTGTGCAGGTGGGCGGGCTGAGCAGCGTGGGCGACAAGACCGTCATC
AACACTGTTGCCAAGTAAGCGACCTAACCCTAGCCCTTTACCTATTCCTA
AACCTAACCCAGGTCACGCCTGTCCTTACCGCGCTGTTGGAAGCGAGGGA
GTCGTAGAGCTCAACAATGAGGGGGCAAGCACTGCCATCAATAGCAGCAT
GCGGACAATGATCAAGTTGCTGCAGGATGGAGAAGCCGGTGTTCATGCGC
ACTTGGGAGCTGGAGTGTGTGCTCTTGAAATCGTTGCAATACTTTGAAGT
CATCGTATTTGTGAGTTGCGCATGTGACAAATCACATCGTCGGGGAACGT
CGCTGATCCCAGGCGCAATGCCAGTGTTAGCGCAGGTAGGGTGACACGTT
TTTTCCCCACTGTTTTTGTTGAAGTTGAAAATCCCGCTGAACAAGGTTGA
TTGCTGTTGATCTTGTCACAAACACCTTTGCCTGTACTTGCTTTAAAAAT
TGTAGTGTGCTGGCGGCGAGGAACGCGAACAGGCTGATGTTATCACCCCT
TCAGTACCCTTGGACACTATTAGCTGTTGTGTTTTTGTCTGATGTCATTT
TTCTCCCTTCTATTTGTGTGTTAATATGATGCAGGCTGAGCACTGGCTTT
CCCACTGTTGTACCTCATGCCTGATGTCATTTCTGCCTTCTTGTTGTGTG
TTAGTAATATGACGCAGGCTGAACACTGGCTTCCCTACTGTTGTACCTCC
TGTCTGATGTCATTTCTGCCTTCTCTTTGTGTGCTGGTATGACGCAGGCT
GAGCACTGGCTTCCCCGCCAAGGTGGTCATTGGCAACTACGTGGTGATTG
AGGAGGGGTGCTCGCTGACGTCGTGCATGGTGGGCGACCAGTGCAATATC
GGCAGGGGGAGCGTCGTCTGCGAAGGTAAGTCACATGTGAAGTTGAGTAA
CTTTAAGAGTAGCACCATGCGACGTTGTGTGAGTTCGAGAGTGGACGACC
AGTGCAAGATTGTCAGGGGCAGCGTTGTCTGCCAGGGCGAGTCTCACACA
CACACACACACACAGCATAACTTGAAGTGTAGTCCCATGTGACTACAAGA
GTGGCAGAGGAGCTCCAACGTAGAAGTTGTTATGGCTTCAGGAGTGGGCG
ACCAGTGCAAGATCAGCAGGGGGAGAGTCGTCTGCGAGGGTGAGTCTCCA
TTGTGAAGGTGTGTGACTTCAACAGTAGCGTCAATGTGAGATTTATGTGT
TTCTGAGAGTGGGTAAGCAAGATCGGCAGCGGGAGCGTCGTCTGCGAAGG
TGAGTCACATGTGAAGTTGGGTGGCTTCGTAGCTCAGAATGTGAAACTTG
TGTGACTTCAAGAGTGGGCGACCAAGATCGGCAGGGGCAGCGTCGCTTGC
GAAGGTGAGTCTCAAGTGTAAGTTGCGTGACTGCAAGAGTAGCTTCATTA
TGAAGTTGTGTGACTTCCAGGGTGGGCCAACGCAGTGCGAAAACGGCAGG
AGGCAGCGTCATCTATGAGGGCGAGTCTGCAACATTGTTGCGGATACTGT
AGCATTCGCACAAACAGAGCGCTGCAAGTCTTGGCTGCCTCCCGTCCAAT
GTTTTCAAGTGAGCTTTTAAAAGCGTGAGAGGATGTCTACATCAAGCCCT
TGGCGATGCCAGCTGCACATTTGACGCGACAGCTCGATTGCTGTGCGCAG
ACGGGCACGTCAACTTCAATTGTGAAGTTTGAAGTTGTGCAGCGCGAGGA
CACGCTGCAAAGACATTGCGACAATAGCGCCATGCCGCAGCGGGCACAGC
ATCATTTTCACTGCTGTCATGCTAATGTCAGTGCCCATGGTGGAGCTGGC
GTCTTACAAACAGTTGTGGTCGGTCTTGTACCGGCTGTCTGTGGCGACAC
TCAGTGCTTAGTTAGGGCTAGGGTTAGGGTTAGGCAAGGGCGTTCTCACA
CTAGCCTCAGGTGTCAAGGTGGCGTTGCAGCACTGTGTCGTACGACAAGT
GGTCAGGTACAGACTGCCTGTGACGACACCAAGTGTGTTACTGCTCGACG
TGAGTCGCGAGGGAGCGCCTTCCCGTGTGCCGCGTAACGTCAGGGGGTTG
AGGTTTAGGCAAGGGTCGAAGCTAGCGCGGCGCTTGTATCGCAAGGCACG
CGCGGTGTCTGTGCAGAAACTGCAAGGCAAATAGAGCATTTATTTGCTCT
GAATGCGTGCGCCGCCTTGCACGTTGTGTGGGCGGTGAACGTGCACCATT
TAGGGTTAAGTTAAGGTCCTTGCCAGCGAACCTCAAGTTTGAAGTGTTGT
GAATTTCACTCACCACCTCGTGCTGCCGAGCGCGCACGTGATCAAGCTCA
ATCAGCGTACAAAGCCACAGTGCTGAGCCGATCCCAGCCCTGACGTGTGT
TCTGCAAGCACGGACGTGTGAAGCGTGGAAGGAACAATCAAGATGCTTCC
TGAATGGGGCTGAAAGTCGCTTCGCGCATGTACTTCAACTACTGCAGGTG
CCATCATGGAGAAGCAGAGTATTCTGCTGCCGGGCAGCGTCCTCACCACC
GGCAGCCTGGTGCCTTCGCGCCAGATCTGGGGGGGCAACCCGGCGCAGTA
TGTTGGCGACGTCGACTCCGACAGCGTTGCAAACTTCAAAGATGAGGTAC
GAGTTGCATCATGCTTGACCTCATGCGGTGGAGTGTTTGCGCCGTACACT
GGGTTCGGTCGAGTAAACAACGCACGTGCATGGGCGCTTGAGCTGCGTTC
GATTGAGTGAGTAGCGTGCGTACAGCGCTGTGTAGGGTTAGGGTTAGGGT
TAGGGTTAGAGTTGTGCTGCGGACCGGGTATGTATGATATATGCATGCGC
CACGCTCCGCGTGATTTGCGTACAAATGGCAGTACCGCAGCACCACATCA
AGTCGATCATGGTTTGGTGCAACAGATGGTGAAAGCTGTTGAGTCCAGCA
GCGCTCAACTGGACATTACTTGAGACAAAGAACCACATTGTGAGCGCAGT
TCTATGTGAATGTTCTGCCGATGGTGGCTGGCTGTGTACAGTGGTGTCCT
CGTCTAGCAATGCCTCGTGTGACTGCAATCAGCAGCCACTGCAATCCGAG
CGTTGCTCAGACAGTTGCGCTCTGACTTGCCTAACCCTAACCCTGGTTTC
CGGCGCTCTGGCTTGCCTAACCGTAACCCCAACGCAACGAAGTCTATGCT
CGCTCGGCCGGCGGATGAAACAGCCTTACAAACCAACCACATCTCAAAAA
GCTGGCTCACATGAAGCTCATGTATGAATCAGTCAGATAGCGCCACGACG
TGCTGTTGGTGAGTCGATTTGCGTCAATTGACTGCGGCACATCCCTAGTC
AAGCGTCCCATCAACGCTTACGGTTGGAAGCATTAGTCAGGGCTAGGGTA
TAGGGTCAAGAGCGTGGCAGCGCTCCTCTGCAGCAGGTGGTTTTGCGTGA
ATTTACCGTGGCACACCCCCTAGTCAAATGTCCCAACAACGGTCACGGTC
AGAGCCATTAATCAGGGTTAGGTTTAGGGTTAGCGTGGCAGCGCTCCTCT
GCAGCAGGTGGTCCCCGCCAGCCCGGCGGCGCAGCGATGCGCGGCCTGTG
TTGAATCACAAGGCGTATGGCAGGGGCCTCGTTTACGTGGAGGGAGATTG
ATAACCTCTGATTGTGACGTACTACGGTGGTCAGACTTCAAGCCAGACTT
GAACTTTGTGTCATGCCCACAACATCGTCCATCACATTGCATTGCGTTCC
CTCGGTGACGGCCCACCGCCAGCGCGCGCGCTTCTGTAACTGCCAGTGCG
CAACTGCCACTTGAGGCGCGAGACTAGCTTGAGGGGCTACTGACTAACTG
ATCTTCGTGGTCCGATGCGCTGGCATGCTGTGATTAAACGGCGCTGGCTA
TCACTACATAATGCTTTGTACTGATGCATACGCCTACGTGCAGCGTGCGC
CTCGCGCACTGATTCCACGCAGTTGCAGTGCAGCGGTTCCGCTAATGGCA
CGTCACTGGCTATATAACTTCACCACTGTGTACATGATTCACGACACATG
CGCTAAATTACTGCAAGCCCTCGCTGAATGCAATATTCGGCAGATCATGA
CTTCTGAACGCACTTGCTCGTGTTCTGTGTTCCTGACCACGCTTGTTTGC
GCTCTGCGCGGCAGGCGGAGCGGCAATTCCTCCTCTCGGAGGAGCACGTC
AACGAATTCAACCCCGCCAACATGGCCTTCACGCACGCCGAGGATCTTGC
AAAGAAAGGCATCACTGTCTAG
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Coding sequence (CDS) from alignment at Contig_33:707376..713147-

>mRNA_5979 ID=mRNA_5979|Name=jgi.p|Trimin1|164861|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=735bp|location=Sequence derived from alignment at Contig_33:707376..713147- (Tribonema minus UTEX_B_3156 )
ATGCCGCACCAGCTTTGCGACACACTGCCTTGCTCGCAGCTGCAATTTGC
CAAATGCCTGCTGCATCGCTCTTCCTGCTTGTTTCCTGAGCCAAGAAACT
CTCGGACATTATGCTCGCTGTCCCTCGCAGTCGCTCGCCACCGACCCCTC
ATGATCCTCAATGGCAAGGCACCCAGGAAGGACTTTGAAAACTGCTTCGT
GGCTCCCAATGCATCCGTGGTTGGGGATGTAGATTTGGTGGATATGACAA
CTATCTGGTATGGGGCTGTGCTGCGCGGAGATAAGAGCTCCATACATGTG
GGCGGGCTGAGCAGCGTGGGCGACAAGACCGTCATCAACACTGTTGCCAA
GCTGAGCACTGGCTTCCCCGCCAAGGTGGTCATTGGCAACTACGTGGTGA
TTGAGGAGGGGTGCTCGCTGACGTCGTGCATGGTGGGCGACCAGTGCAAT
ATCGGCAGGGGGAGCGTCGTCTGCGAAGGTGCCATCATGGAGAAGCAGAG
TATTCTGCTGCCGGGCAGCGTCCTCACCACCGGCAGCCTGGTGCCTTCGC
GCCAGATCTGGGGGGGCAACCCGGCGCAGTATGTTGGCGACGTCGACTCC
GACAGCGTTGCAAACTTCAAAGATGAGGCGGAGCGGCAATTCCTCCTCTC
GGAGGAGCACGTCAACGAATTCAACCCCGCCAACATGGCCTTCACGCACG
CCGAGGATCTTGCAAAGAAAGGCATCACTGTCTAG
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