mRNA_5970 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164721
Unique NamemRNA_5970
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: A0A836CFT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT1_9STRA)

HSP 1 Score: 681 bits (1757), Expect = 8.350e-248
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1
Query:    1 MPGPLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA 996
            MPGPLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA
Sbjct:    1 MPGPLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA 332          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: D8LL37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL37_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 5.600e-128
Identity = 181/327 (55.35%), Postives = 227/327 (69.42%), Query Frame = 1
Query:   16 PPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA 996
            P  + TMNL + G CTV K+ TS G TVRRL TRD     D+DGA+T +  + +T +PD Y V DI G  S+RLH+++NKPD  L   D+ G   R +   RT R +DPL+P+Y LPS+T APP  PKF RDS+ V DIEGT  +PLY  +QR           + GWKPRH RAR EA PLD+ LNV DIT  GF+T+R TNPL P YR  G ++ADDPV+SRPRALP  K+ PF+ LTTADIEGA PGW+P  Q++PPLE RRH+RNTN++GDI GA AD+V+H+I T RHV+PLNP+Y SLDGEP+  P +P Y+  A  +A A
Sbjct:   17 PERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGAQTFVRTSTLTNKPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNKWLFRTTRCIDPLEPEYTLPSFTTAPPIAPKFTRDSHDVSDIEGTKSRPLYPLEQRHNTLVDDIEGAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTQRHVNPLNPVYDSLDGEPLANPQTPLYKEPACVEAEA 343          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: A0A6H5K072_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K072_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 6.910e-121
Identity = 184/327 (56.27%), Postives = 230/327 (70.34%), Query Frame = 1
Query:   16 PPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA 996
            P  + TMNL + G CTV K+ TS G TVRRL TRD     D+DGART +  + +T +PD Y V DI G  S+RLH+++NKPD  L   D+ G   R +   RT R +DPL+P+Y LPS+T A P  PKF RDS+ V DIEGT  +         XXXXXXXXX + GWKPRH RAR EA PLD+ LNV DIT  GF+T+R TNPL P YR  G ++ADDPV+SRPRALP  K+ PF+ LTTADIEGA PGW+P  Q++PPLE RRH+RNTN++GDI GA AD+V+H+I T+RHV+PL+P+Y SLDGEP+  P +P Y+  A  +A A
Sbjct:   17 PERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGARTFVRTSTLTNKPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNQWRFRTTRCIDPLEPEYTLPSFTTATPIAPKFTRDSHDVSDIEGTKSRXXXXXXXXXXXXXXXXXXAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTERHVNPLDPVYDSLDGEPLANPQTPLYKEPACVEAEA 343          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: A0A7S3ZUA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA3_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.050e-81
Identity = 148/330 (44.85%), Postives = 194/330 (58.79%), Query Frame = 1
Query:    1 MPGPLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANIT-KRPDLYNVNDISGACSLRLHRESNKPDTTLLCAD-VNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYD 984
            +PG     + TM+L + G CT+  ++       R     +   V DIDGA   +     T +RPDLY   DI  +  ++LH    +P+      + + G   R   F ++ RH DPL P+Y LP      PP PKF+RD Y+V DI+GT PK         XXXXXXXXX +  W+PRH RAR EAPP D  L+V+DI D GF T R T+P+ P Y   G E  DDP+ ++PRALP     P+ SL T DI GA+ GW+PP ++ PP E+RRHWR+TN+VGDI GA AD+V+H I T R  +PLNP YRSLDG+ +  PT P + S  YD
Sbjct:    3 LPGMADDRFQTMSLQSAGACTIANKE-------RPACAHESNYVGDIDGAAPELKYMRYTARRPDLYVTKDIEKSSPMKLHARGPQPNPNEWHNNPIEGSKPRETRF-KSNRHTDPLAPEYVLPRCKLEKPPTPKFIRDGYTVTDIDGTVPKXXXXXXXXXXXXXXXXXXAQASWRPRHERARREAPPRD-GLDVRDIMDEGFTTTRVTDPMNPHYFMNGMETCDDPIRTKPRALPKAIPGPYRSLYTDDILGAKSGWRPPHEMQPPPEKRRHWRHTNFVGDIGGAQADTVQHTIPTKRRTNPLNPAYRSLDGDILPDPTKPDF-SHIYD 322          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: F0YFZ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFZ5_AURAN)

HSP 1 Score: 257 bits (657), Expect = 9.480e-79
Identity = 125/246 (50.81%), Postives = 159/246 (64.63%), Query Frame = 1
Query:  229 LRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRY 966
            ++LH         L   D+ G   R   F +TERHV+PL P+Y LPS     PP PKFVRD Y + DIEGT P+  +R+ QRE          + GW+PRH R R E PP+D +LNVKDI D GFKT R T+PL P +R  G E+ DD V + P+ LP   + P  SL T DIEGA+ GWKPP ++ PPLE+RRH+RNTNY+GDI GA  D+V+H+IRT R  +PL+P YRSLDG+ +G PT P +
Sbjct:    1 MKLHPRGVGGVDRLAETDIEGSKPRPLHF-KTERHVNPLCPEYTLPSCALDMPPVPKFVRDGYGISDIEGTAPRSRFRFAQRETYDVKDIEGAQAGWRPRHERVRREGPPMD-SLNVKDINDIGFKTTRVTDPLRPTHRINGMEVKDDMVRTMPKKLPKPHDGPTLSLYTDDIEGARCGWKPPHEMQPPLEKRRHFRNTNYIGDITGAQPDTVKHSIRTQRETNPLHPAYRSLDGDLLGDPTQPDF 244          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: A0A7S1UJ89_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ89_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.390e-73
Identity = 137/327 (41.90%), Postives = 169/327 (51.68%), Query Frame = 1
Query:   25 YATMNLTAGGVCTVPKEQTSRGWTVRRLAT--RDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARA-RAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA 996
            + TMN+T  G CTV         T  RL T  R   R DDIDGA+  +     T +PD + +                                R   FL T+R VDPL P Y LPS+  AP P+     D+  V+DI GTH KPLY + QR           + GWKPR+      E  P   +L+V DI   GFK+ R T+P  PV+   G  I DD     P+ LPPQKN PFFSL + DIEGA  GW PP  L P +E RRH+RNTN+VGDI GA +D+V+H IRT R+V+PLNP YRSLDG  +  P  P Y   A  +A A
Sbjct:    9 WQTMNITTSGPCTVE--------TANRLVTKTRATNRTDDIDGAKPFLRYTQFTNKPDSFQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPSRFLSTKRRVDPLVPTYTLPSFRKAPAPEQPHYSDTMKVEDIAGTHSKPLYPFPQRINHKVDDIEGAQSGWKPRYRNVFMTEERPS--SLDVSDIAKEGFKSTRVTDPNRPVHYVNGMTIQDDLRYCMPKRLPPQKNTPFFSLQSNDIEGAVSGWVPPHALRPAIEDRRHFRNTNFVGDIEGAQSDTVKHTIRTKRNVNPLNPYYRSLDGILLDPPCRPMYHDPAVLEATA 325          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: A0A2P4X5K5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5K5_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.730e-56
Identity = 111/255 (43.53%), Postives = 148/255 (58.04%), Query Frame = 1
Query:  184 RPDLYNVNDISGACSLRLHRESNKP--DTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPP---LEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDG 933
            +P  Y+V+DI G+ S+ LH ++ +   D       + G T     F  T R V+PL+P+YKLPS+T AP  +PKF+RDSY+V DIEGT  K       R+          + GW PRH R   E PP D  LNV DIT+  FK+ R TN L PVY   G  IADDP+ SRP A  P+++ P F+L T DI+GA  G   P         + +RR +R+TN   DI GA AD++ H+IR+ RH+DP++P Y  LDG
Sbjct:    5 KPHFYDVHDIKGSTSMELHPKNWRAGSDDRFKQLPIEGTTSHPAGF-HTNRVVNPLEPNYKLPSFTKAPSVEPKFLRDSYNVSDIEGTSIKIRDIQHPRDGLKLNDIAGAQAGWLPRHKRGLRENPPRDI-LNVTDITNVDFKSSRVTNVLNPVYSVNGMTIADDPL-SRPLAQHPKRDKPNFTLRTDDIDGA--GCSDPATAIVAGIIMSKRRDFRDTNVTSDITGAKADTLLHSIRSTRHIDPISPKYSGLDG 254          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: A0A2D4CDY6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDY6_PYTIN)

HSP 1 Score: 195 bits (495), Expect = 3.650e-55
Identity = 115/272 (42.28%), Postives = 152/272 (55.88%), Query Frame = 1
Query:  130 VDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNK--PDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQL-HPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGE 936
            + DI GAR  +       +P  +  NDI G+CS  LH +  +   D       + G + R   F RT R V+P++P+YKLPS+ AAPP  PKF+RDSY V DI GT  KP      R           + GW P H RA  E PP D  L+V DI +  FK+ R T+ L PVY+  G    DD + S P+ L PQ+N P ++  TADI GA P     T + + P E+RRH+R TN   DI GA+AD+V H+IR++R VDP  P Y +LDG+
Sbjct:   48 ISDIAGARPLLKDHVYVNKPHFHEPNDIPGSCSKELHPKHRRVGSDDRFKQLHIEGSSPRPSGF-RTNRVVNPMEPEYKLPSFQAAPPLIPKFLRDSYDVSDIAGTSFKPKVITNPRSPLRVDDIAGAQAGWLPFHRRASREHPPRDI-LDVADIVNVDFKSSRVTDVLNPVYKVNGMTYQDDAL-SHPKLLHPQRNKPSYAXQTADIAGANPFDASKTVVGNIPNEKRRHFRQTNRTDDITGATADTVMHSIRSNRRVDPTWPDYVALDGQ 316          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: D0NBY4_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NBY4_PHYIT)

HSP 1 Score: 195 bits (495), Expect = 4.000e-55
Identity = 119/282 (42.20%), Postives = 155/282 (54.96%), Query Frame = 1
Query:  100 RRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLH--RESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPL--EQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDG 933
            +R   R    V DI G R  +       +P  Y+ +DI G+ S+ LH  R     D       + G T R   F RTER V+PL+P YKLPS+T APP +PKF+RDSY+V DI+GT  K       R+          + GW PRH R   E PP D  LNV+DIT+  FK+ R TN L PVY   G  + DDP  SRP A  P+++ P ++L T DIEGA     P T +   +    RR++R+TN   DI GA AD++ H+IR+ R VDP  P Y +LDG
Sbjct:   39 KRSPDRVTNDVTDIRGTRPLLKNHMYVNKPHFYDAHDIKGSTSMELHPKRWRAGSDDRFRQLPIEGTTSRPAGF-RTERVVNPLEPSYKLPSFTNAPPIEPKFLRDSYNVADIDGTSIKVRDIQHPRDALKLDDIAGAQAGWLPRHKRGLREHPPRDI-LNVQDITNGDFKSSRITNVLNPVYTVNGMTVGDDP-RSRPLAQHPKRDKPSYALKTDDIEGAS-CTDPATAIVAGIVMAHRRNYRDTNITSDISGAKADTLVHSIRSVRRVDPNAPQYSALDG 316          
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Match: G4Z4F7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z4F7_PHYSP)

HSP 1 Score: 195 bits (495), Expect = 4.390e-55
Identity = 119/279 (42.65%), Postives = 160/279 (57.35%), Query Frame = 1
Query:  109 ATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKP--DTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPL--EQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDG 933
            AT DV    DI GAR  +       +   Y+ +DI G+ S+ LH ++ +   D       + G T +   F RT+R V+PL+P+YKLPS+  APP +PKF+RDSY+V DIEGT  K       R+         T+CGW PRH R   E PP D  LNV+DIT+  F++ R TN L PVY   G   ADDP+ SRP    P+++ P ++L T DIEGA     P T +   +    RR++R+TN   DI GA AD++ H+IR+ R VDP  PLY +LDG
Sbjct:   42 ATNDVT---DILGARPLLKNHVYVNKLHFYDAHDIKGSTSMELHPKNWRAGSDNRFKQLPIEGTTSQPAGF-RTDRVVNPLEPNYKLPSFVKAPPLEPKFLRDSYNVSDIEGTSIKIRDIQHPRDGLKVDDIAGTQCGWLPRHKRGLRENPPRDI-LNVQDITNVDFRSSRVTNVLNPVYTVNGMTFADDPL-SRPLVQHPKRDKPNYALKTDDIEGASCA-DPATAIVAGIVMAHRRNFRDTNVTKDITGAKADTLLHSIRSTRRVDPNAPLYSALDG 313          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164721 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFT1_9STRA8.350e-248100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LL37_ECTSI5.600e-12855.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K072_9PHAE6.910e-12156.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3ZUA3_9STRA1.050e-8144.85Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
F0YFZ5_AURAN9.480e-7950.81Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1UJ89_9STRA1.390e-7341.90Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2P4X5K5_9STRA2.730e-5643.53Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2D4CDY6_PYTIN3.650e-5542.28Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
D0NBY4_PHYIT4.000e-5542.20Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
G4Z4F7_PHYSP4.390e-5542.65Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:617026..618430 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164721|e_gw1.33.13.1
Max annot lvl2759|Eukaryota
EggNOG OGs2C1R0@1|root,2RZH6@2759|Eukaryota
Evalue9.19e-129
Seed ortholog2880.D8LL37
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_003400.1
TranscriptId165043
TrackFilteredModels1
ProteinId164721
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164721gene_5970Tribonema minus UTEX_B_3156 geneContig_33 617026..618430 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164721Trimin1|164721|e_gw1.33.13.1Tribonema minus UTEX_B_3156 polypeptideContig_33 617026..618430 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5970_2exon_5970_2Tribonema minus UTEX_B_3156 exonContig_33 617026..617250 -
exon_5970_1exon_5970_1Tribonema minus UTEX_B_3156 exonContig_33 617660..618430 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5970CDS_5970Tribonema minus UTEX_B_3156 CDSContig_33 617660..618430 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5970 ID=mRNA_5970|Name=jgi.p|Trimin1|164721|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=996bp|location=Sequence derived from alignment at Contig_33:617026..618430- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGGCCCACTACCACCAGAGTATGCGACCATGAATTTGACAGCAGG
CGGCGTGTGCACAGTGCCGAAGGAGCAGACCAGCAGGGGCTGGACCGTCA
GACGGCTGGCGACTAGGGACGTCATGCGTGTCGACGACATCGACGGAGCT
CGGACGCACATTCCTGTCGCAAACATCACGAAGAGGCCAGACCTCTACAA
TGTCAACGACATCAGCGGCGCCTGCAGCTTGCGCCTGCACCGCGAATCCA
ACAAGCCAGACACGACTCTGCTGTGCGCGGACGTGAATGGGCTGACCCTC
CGACGTCGAGAGTTTCTGCGCACTGAGCGGCACGTGGACCCCCTCGATCC
CGACTACAAGCTGCCCTCCTACACAGCGGCGCCGCCGCCACAACCAAAGT
TCGTCAGGGACTCGTACAGCGTCGATGACATCGAGGGCACACACCCCAAG
CCGCTGTATCGGTACCAGCAAAGGGAGAACCACAGCGCCGACGACATAGA
GGGCACGAAGTGTGGCTGGAAGCCGCGGCACGCGCGCGCACGCGCGGAGG
CACCGCCGCTCGACTATGCGCTGAACGTGAAGGACATTACGGACAGCGGC
TTCAAGACGCAGCGTTGCACCAATCCGCTTGTCCCAGTGTACAGGTGTTA
CGGCAAGGAAATAGCTGACGATCCAGTGGAAAGTCGCCCGCGCGCGCTGC
CGCCGCAGAAGAACGCTCCGTTCTTTTCCCTGACAACGGCTGACATTGAG
GGAGCGCAGCCAGGGTGGAAGCCGCCGACGCAGCTGCACCCGCCCCTCGA
GCAGCGCCGCCACTGGCGCAACACCAACTACGTAGGCGACATCCGCGGCG
CCAGCGCCGACTCCGTGCGCCACGCCATCCGCACGGACCGCCACGTCGAC
CCCCTAAACCCCCTCTACCGCAGCCTCGACGGCGAGCCCATGGGCGGCCC
CACATCGCCGCGCTACCGCAGCGCAGCGTACGATCAGGCGGCGGCG
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protein sequence of jgi.p|Trimin1|164721

>Trimin1|164721|e_gw1.33.13.1 ID=Trimin1|164721|e_gw1.33.13.1|Name=jgi.p|Trimin1|164721|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=332bp
MPGPLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGA
RTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTL
RRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPK
PLYRYQQRENHSADDIEGTKCGWKPRHARARAEAPPLDYALNVKDITDSG
FKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIE
GAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVD
PLNPLYRSLDGEPMGGPTSPRYRSAAYDQAAA
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mRNA from alignment at Contig_33:617026..618430-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5970 ID=mRNA_5970|Name=jgi.p|Trimin1|164721|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1405bp|location=Sequence derived from alignment at Contig_33:617026..618430- (Tribonema minus UTEX_B_3156 )
ATGCCTGGCCCACTACCACCAGAGTATGCGACCATGAATTTGACAGCAGG CGGCGTGTGCACAGTGCCGAAGGAGCAGACCAGCAGGGGCTGGACCGTCA GACGGCTGGCGACTAGGGACGTCATGCGTGTCGACGACATCGACGGAGCT CGGACGCACATTCCTGTCGCAAACATCACGAAGAGGCCAGACCTCTACAA TGTCAACGACATCAGCGGCGCCTGCAGCTTGCGCCTGCACCGCGAATCCA ACAAGCCAGACACGACTCTGCTGTGCGCGGACGTGAATGGGCTGACCCTC CGACGTCGAGAGTTTCTGCGCACTGAGCGGCACGTGGACCCCCTCGATCC CGACTACAAGCTGCCCTCCTACACAGCGGCGCCGCCGCCACAACCAAAGT TCGTCAGGGACTCGTACAGCGTCGATGACATCGAGGGCACACACCCCAAG CCGCTGTATCGGTACCAGCAAAGGGAGAACCACAGCGCCGACGACATAGA GGGCACGAAGTGTGGCTGGAAGCCGCGGCACGCGCGCGCACGCGCGGAGG CACCGCCGCTCGACTATGCGCTGAACGTGAAGGACATTACGGACAGCGGC TTCAAGACGCAGCGTTGCACCAATCCGCTTGTCCCAGTGTACAGGTGTTA CGGCAAGGAAATAGCTGACGATCCAGTGGAAAGTCGCCCGCGCGCGCTGC CGCCGCAGAAGAACGCTCCGTTCTTTTCCCTGACAACGGCTGACATTGAG GGAGCGCAGCCAGGGTGGAAGGTGAATTCGTTTGAAAAGATGTGTGCATA GCATGTCACAGCAAGGTTTGTAGTGATGGCAATCTTAGGTTTGAGCAGAG GTCTACCTTGCATGGCATGACGTCATACGGCTAGGTGCTAAAGTGGCTGC CTTGGCAAAGGTTGCACGATGTTCCCGCGCAATCGTTGGGGCCGACTGGT TAACCATGAAACGCAGTCATCCTGGTGCTGTGCTCATAGTGTGACTGGTA ACCTGCAATGTTAGTATGCAAGCCGCAAGTCCTGAGTGTTCTCGCACCTT TGTCATGCAGAAGCACAGTTCGCCGCGAATCGCCAACTCTGCACGCATCT ACAGCGCCATGTGCCACCTTCACTCCTACCAGCCCTCACACATGCCCCCC CCCCCCCCCCCCCCTCTCCACAACCCCCAGCCGCCGACGCAGCTGCACCC GCCCCTCGAGCAGCGCCGCCACTGGCGCAACACCAACTACGTAGGCGACA TCCGCGGCGCCAGCGCCGACTCCGTGCGCCACGCCATCCGCACGGACCGC CACGTCGACCCCCTAAACCCCCTCTACCGCAGCCTCGACGGCGAGCCCAT GGGCGGCCCCACATCGCCGCGCTACCGCAGCGCAGCGTACGATCAGGCGG CGGCG
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Coding sequence (CDS) from alignment at Contig_33:617026..618430-

>mRNA_5970 ID=mRNA_5970|Name=jgi.p|Trimin1|164721|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=996bp|location=Sequence derived from alignment at Contig_33:617026..618430- (Tribonema minus UTEX_B_3156 )
ATGCCTGGCCCACTACCACCAGAGTATGCGACCATGAATTTGACAGCAGG
CGGCGTGTGCACAGTGCCGAAGGAGCAGACCAGCAGGGGCTGGACCGTCA
GACGGCTGGCGACTAGGGACGTCATGCGTGTCGACGACATCGACGGAGCT
CGGACGCACATTCCTGTCGCAAACATCACGAAGAGGCCAGACCTCTACAA
TGTCAACGACATCAGCGGCGCCTGCAGCTTGCGCCTGCACCGCGAATCCA
ACAAGCCAGACACGACTCTGCTGTGCGCGGACGTGAATGGGCTGACCCTC
CGACGTCGAGAGTTTCTGCGCACTGAGCGGCACGTGGACCCCCTCGATCC
CGACTACAAGCTGCCCTCCTACACAGCGGCGCCGCCGCCACAACCAAAGT
TCGTCAGGGACTCGTACAGCGTCGATGACATCGAGGGCACACACCCCAAG
CCGCTGTATCGGTACCAGCAAAGGGAGAACCACAGCGCCGACGACATAGA
GGGCACGAAGTGTGGCTGGAAGCCGCGGCACGCGCGCGCACGCGCGGAGG
CACCGCCGCTCGACTATGCGCTGAACGTGAAGGACATTACGGACAGCGGC
TTCAAGACGCAGCGTTGCACCAATCCGCTTGTCCCAGTGTACAGGTGTTA
CGGCAAGGAAATAGCTGACGATCCAGTGGAAAGTCGCCCGCGCGCGCTGC
CGCCGCAGAAGAACGCTCCGTTCTTTTCCCTGACAACGGCTGACATTGAG
GGAGCGCAGCCAGGGTGGAAGCCGCCGACGCAGCTGCACCCGCCCCTCGA
GCAGCGCCGCCACTGGCGCAACACCAACTACGTAGGCGACATCCGCGGCG
CCAGCGCCGACTCCGTGCGCCACGCCATCCGCACGGACCGCCACGTCGAC
CCCCTAAACCCCCTCTACCGCAGCCTCGACGGCGAGCCCATGGGCGGCCC
CACATCGCCGCGCTACCGCAGCGCAGCGTACGATCAGGCGGCGGCG
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