mRNA_5946 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348948
Unique Name	mRNA_5946
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348948 vs. uniprot
Match: A0A835Z363_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z363_9STRA)

HSP 1 Score: 790 bits (2041), Expect = 3.110e-285
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 1

Query:    1 MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPFWGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDYLPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKGAAAAAASPLSLPTLCAELCGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXGSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGGLPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQELSQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAADVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGXXXXXXXXXXXXXXXXXXXXXXXXXXSLEGAFVCEWAGLQVVTAVXXXXXXXXXXXPLSVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT 1476
            MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPFWGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDYLPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKGAAAAAASPLSLPTLCAELCGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXGSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGGLPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQELSQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAADVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGXXXXXXXXXXXXXXXXXXXXXXXXXXSLEGAFVCEWAGLQVVTAVXXXXXXXXXXXPLSVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT
Sbjct:    1 MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPFWGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDYLPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKGAAAAAASPLSLPTLCAELCGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXGSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGGLPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQELSQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAADVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGXXXXXXXXXXXXXXXXXXXXXXXXXXSLEGAFVCEWAGLQVVTAVXXXXXXXXXXXPLSVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT 492

[Close]

BLAST of jgi.p|Trimin1|348948 vs. uniprot
Match: A0A835Z1Y8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y8_9STRA)

HSP 1 Score: 1488 bits (3853), Expect = 0.000e+0
Identity = 1041/1041 (100.00%), Postives = 1041/1041 (100.00%), Query Frame = 1

Query:    1 MWEARVLLQLFMPLGFLGTGKSSIAKELQQRLGAAVISSEYLEVGKGGKKQARRLKSQEYEQAIKTALCAQYRALPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSNAAVAGVXXXXXXXXXXXXXPSPMHVDQQSSGEGHLNKQQLGRRSNDGASSTGVAGGMPAAAXXXXXXXXAGTRPEQVNAQGGKGGKKGKARGFGGDNRPPAAADVAGTADAPPPAPEDAMEVERRGGKAHRGKRGNPNNGNAARGQQAALPRHDDATSSAASSTAPXXXXASSTSAAGXXXXXXXXXXXXXXXXXXXAQHPHNAKGKHGKGGRNGGTSNGTGADQSDPRLGNGGGXXXXXXGHDTAGAGAKHAPAGASGSSSMXXXXXXXXXXQHAGSSRGGGRGVGVTGAELGSSTHDIMEVDAADLPAPVSAAGKESHHAVIADAAVLSTNGGTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAARHRALPSPLVVRDKNIPKEDLWRAVGSAQPSAAIALAFGGSARDFGSDAAAAAMLGAVPPVSPWELAVCMRRVMQRAEHPSIMPQADITPGLVCQFASRLAGGYYCSVTPGGKVTGVSYSRWQWLADIADTFGGAHRVIGIPLCRPEQYSTAPPQPLASLLEVGMYACGGFRVEDDAFAGIAQIPGVKELMARDRAARRGAGDADGGKHVXXXXXXXXXXXXXXXXEADAALGAMAYDRADADFVRILDDAVHKIEALLTTSDEPTNTAAQSVTARXXXXXXXXXXPSTSTPLAADAAGPAAVLTAKAASSSLPLPRTGAFYYAIIARVSDLEAVLGATAVALAKAWLRDRWSLDWPAPGGNVHVTLLFVANSAAATAQAATVQTLHEMLGRKAQMMVTGIACDGQAAALTVTDLLLGSSGVIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGAIPCVNTCAHMTLATAPGVAPRHSNNMLEGGRYEFLELAGFAQPAPPLQLAGTVALVHRQSRIA 3123
            MWEARVLLQLFMPLGFLGTGKSSIAKELQQRLGAAVISSEYLEVGKGGKKQARRLKSQEYEQAIKTALCAQYRALPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSNAAVAGVXXXXXXXXXXXXXPSPMHVDQQSSGEGHLNKQQLGRRSNDGASSTGVAGGMPAAAXXXXXXXXAGTRPEQVNAQGGKGGKKGKARGFGGDNRPPAAADVAGTADAPPPAPEDAMEVERRGGKAHRGKRGNPNNGNAARGQQAALPRHDDATSSAASSTAPXXXXASSTSAAGXXXXXXXXXXXXXXXXXXXAQHPHNAKGKHGKGGRNGGTSNGTGADQSDPRLGNGGGXXXXXXGHDTAGAGAKHAPAGASGSSSMXXXXXXXXXXQHAGSSRGGGRGVGVTGAELGSSTHDIMEVDAADLPAPVSAAGKESHHAVIADAAVLSTNGGTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAARHRALPSPLVVRDKNIPKEDLWRAVGSAQPSAAIALAFGGSARDFGSDAAAAAMLGAVPPVSPWELAVCMRRVMQRAEHPSIMPQADITPGLVCQFASRLAGGYYCSVTPGGKVTGVSYSRWQWLADIADTFGGAHRVIGIPLCRPEQYSTAPPQPLASLLEVGMYACGGFRVEDDAFAGIAQIPGVKELMARDRAARRGAGDADGGKHVXXXXXXXXXXXXXXXXEADAALGAMAYDRADADFVRILDDAVHKIEALLTTSDEPTNTAAQSVTARXXXXXXXXXXPSTSTPLAADAAGPAAVLTAKAASSSLPLPRTGAFYYAIIARVSDLEAVLGATAVALAKAWLRDRWSLDWPAPGGNVHVTLLFVANSAAATAQAATVQTLHEMLGRKAQMMVTGIACDGQAAALTVTDLLLGSSGVIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGAIPCVNTCAHMTLATAPGVAPRHSNNMLEGGRYEFLELAGFAQPAPPLQLAGTVALVHRQSRIA
Sbjct:    1 MWEARVLLQLFMPLGFLGTGKSSIAKELQQRLGAAVISSEYLEVGKGGKKQARRLKSQEYEQAIKTALCAQYRALPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSNAAVAGVXXXXXXXXXXXXXPSPMHVDQQSSGEGHLNKQQLGRRSNDGASSTGVAGGMPAAAXXXXXXXXAGTRPEQVNAQGGKGGKKGKARGFGGDNRPPAAADVAGTADAPPPAPEDAMEVERRGGKAHRGKRGNPNNGNAARGQQAALPRHDDATSSAASSTAPXXXXASSTSAAGXXXXXXXXXXXXXXXXXXXAQHPHNAKGKHGKGGRNGGTSNGTGADQSDPRLGNGGGXXXXXXGHDTAGAGAKHAPAGASGSSSMXXXXXXXXXXQHAGSSRGGGRGVGVTGAELGSSTHDIMEVDAADLPAPVSAAGKESHHAVIADAAVLSTNGGTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAARHRALPSPLVVRDKNIPKEDLWRAVGSAQPSAAIALAFGGSARDFGSDAAAAAMLGAVPPVSPWELAVCMRRVMQRAEHPSIMPQADITPGLVCQFASRLAGGYYCSVTPGGKVTGVSYSRWQWLADIADTFGGAHRVIGIPLCRPEQYSTAPPQPLASLLEVGMYACGGFRVEDDAFAGIAQIPGVKELMARDRAARRGAGDADGGKHVXXXXXXXXXXXXXXXXEADAALGAMAYDRADADFVRILDDAVHKIEALLTTSDEPTNTAAQSVTARXXXXXXXXXXPSTSTPLAADAAGPAAVLTAKAASSSLPLPRTGAFYYAIIARVSDLEAVLGATAVALAKAWLRDRWSLDWPAPGGNVHVTLLFVANSAAATAQAATVQTLHEMLGRKAQMMVTGIACDGQAAALTVTDLLLGSSGVIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGAIPCVNTCAHMTLATAPGVAPRHSNNMLEGGRYEFLELAGFAQPAPPLQLAGTVALVHRQSRIA 1041

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348948 vs. uniprot
BLAST of jgi.p|Trimin1|348948 vs. uniprot

BLAST of jgi.p|Trimin1|348948 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z363_9STRA	3.110e-285	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

BLAST of jgi.p|Trimin1|348948 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z1Y8_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_33	contig	Contig_33:370009..375792 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348948\|estExt_Genemark1.C_Ctg_330058
Hectar predicted targeting category	other localisation
Ec32 ortholog description	PIN domain-like
Ec32 ortholog	Ec-03_004120.1
TranscriptId	349270
Track	FilteredModels1
ProteinId	348948

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348948	gene_5946	Tribonema minus UTEX_B_3156	gene	Contig_33 370009..375792 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348948	Trimin1\|348948\|estExt_Genemark1.C_Ctg_330058	Tribonema minus UTEX_B_3156	polypeptide	Contig_33 370009..375714 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5946_1	exon_5946_1	Tribonema minus UTEX_B_3156	exon	Contig_33 370009..370082 +
exon_5946_2	exon_5946_2	Tribonema minus UTEX_B_3156	exon	Contig_33 370501..370642 +
exon_5946_3	exon_5946_3	Tribonema minus UTEX_B_3156	exon	Contig_33 371244..371316 +
exon_5946_4	exon_5946_4	Tribonema minus UTEX_B_3156	exon	Contig_33 373061..373638 +
exon_5946_5	exon_5946_5	Tribonema minus UTEX_B_3156	exon	Contig_33 374952..375380 +
exon_5946_6	exon_5946_6	Tribonema minus UTEX_B_3156	exon	Contig_33 375448..375565 +
exon_5946_7	exon_5946_7	Tribonema minus UTEX_B_3156	exon	Contig_33 375650..375792 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5946	CDS_5946	Tribonema minus UTEX_B_3156	CDS	Contig_33 370009..370082 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5946	UTR3_5946	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_33 375715..375792 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_33:370009..375792+
coding sequence from alignment at Contig_33:370009..375792+

spliced messenger RNA

>mRNA_5946 ID=mRNA_5946|Name=jgi.p|Trimin1|348948|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1557bp|location=Sequence derived from alignment at Contig_33:370009..375792+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGATCTCTGGAACGTTGGCGCTGTGGTGATGGCGGTGCGGGAGGCGGA
CCGGCGGCTGGCGCTCATTACCAGGCAGACAGGGTGTGCGGCAGTGCTCA
GCAATGACACCGACTTCCTCATCTACGACGCCCCGGGCTTCATACCCTTC
TGGGGCCTGGATGTCAGCCCAGAGGCAGCCCTGGCCTTTGTGTTCTCGCG
CCAGAAGCTGGCCCGCACCAAGGCGATAGTCAGCAATGCCAGGGCGGGGA
GGCAGACCAGCAGGGGGTTGTCGGGAGGGGAGGGGGGGGGCAACGACTAC
CTGCCCGACGCGCCCGACTACTGCCACGCCGCCATCCTCTCTGGCGCCGC
ATGGGGCGGCCACGGCAGCTCGCGCCACAAGGGCAGCAGGGCCGTGCTAG
AGAGCGTAGGCAAGTATCTGGCCTTCAAAACGCGCCTCACGGGCAAGGGC
GCCGCCGCCGCCGCTGCTTCACCGCTCAGCCTGCCGACGCTGTGCGCGGA
GCTCTGCGGCAGCGGCAGCGGCGGCGGCGGTAGCAGCGGCAGCAGCGCCG
CGCCGACGGCCGCGCGCAGGGCGTGCAACCGCAAGAAGCGGCGGCGGAAG
GGGAGCATCAGCGACGCCGCCGCAGCAGCGCCGCACGATCCCGGGAACGT
TCCGGCGTCGCGCCCGGAGCGCTTCCTGGCGCTGTTGATGGCGTCCATTG
CGCAGTATGATCTTGCTGGGGGGGAGAGGGTGACTGGGGGGGGCGGGGGC
TTGCCGCGAAGCCTCCATGTTGTACCCAGCGTTACGCAGGCCGTGACGGA
GGGGGTGTTCTGGGGCGGCGTCGTGCTGGAGGATAGTTCCGAGGGGCGCG
GAGGAGCGTGGCTGCAGTCGCCTTCAGAGCAAGCTCGAGAGCAGGAGCTC
TCCCAGGGCACCTCTCACAAACGCATCGGGGGCCACCCGTCCAGCGCAAC
AGCAGCAGCAGCAGCAGCTGAGCACTGCTGCACGCTGCTGGGCCTGGAGC
GGGGCGCTGCCATCCTTGCACGACACGCGCGCAACGCCCCCGCGGCAGCA
GACGTGCTGGCGGCGGTGCTGACGGCAGCAGTCGCGCAGCGCCACTCTGC
AGGGCCGTCATTTCTTGGCCTGCTGGCGTTCATTGCTGCTGCAGCGGCGC
CGCCATCGGTGCCAGCTGAGTGCGGCTGCCTGTGCGCCTGTCGCTGCGCC
TGCGGCGCCGACAACGACGGCAGCGGCGGCGGTGGCGCAGCAGCTGCGGC
GGCATCGCTGGAAGGCGCGTTTGTGTGCGAGTGGGCGGGGCTGCAGGTGG
TGACGGCGGTAGTGGTGGTGGTGATGGTGCTGCTTCTGCTCCTGCCACTG
TCGGTGCTTCTGCTGCCACCCCTTCTAGGCACGATGATGCTTCCGCTGCC
GCTGCTGGTGGAGCCGCTGACGGTGACGGTGGCGGGGATAGCGATGCCGC
TGGCGCCAGCGATGACATTTGTGACATAATGGCGATGGTCAGCGCTTCGG
CTTGGAGCCCGCGGTCAGTGGCCCGGTGCTTGGGGCTGTGCGCGAAATGC
AGCAGCG

protein sequence of jgi.p|Trimin1|348948

>Trimin1|348948|estExt_Genemark1.C_Ctg_330058 ID=Trimin1|348948|estExt_Genemark1.C_Ctg_330058|Name=jgi.p|Trimin1|348948|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=493bp
MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPF
WGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDY
LPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKG
AAAAAASPLSLPTLCAELCGSGSGGGGSSGSSAAPTAARRACNRKKRRRK
GSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGG
LPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQEL
SQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAA
DVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGCLCACRCA
CGADNDGSGGGGAAAAAASLEGAFVCEWAGLQVVTAVVVVVMVLLLLLPL
SVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT*

mRNA from alignment at Contig_33:370009..375792+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5946 ID=mRNA_5946|Name=jgi.p|Trimin1|348948|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5784bp|location=Sequence derived from alignment at Contig_33:370009..375792+ (Tribonema minus UTEX_B_3156 )
ATGGATCTCTGGAACGTTGGCGCTGTGGTGATGGCGGTGCGGGAGGCGGA
CCGGCGGCTGGCGCTCATTACCAGGTGGTGATTATCAGGCGTGACCGTTA
AGGTTGCAGGTATCACGCGCACGTTTTGCCACAACCATCGCTTATGACAT
TGGCGGATTAGTCTCTGCAGCACGCGAGGCGGACCGCCGGCCGGTGCTAG
CATTGAGTATCGGCAGTGCAGCATATGTTCTGTACTCAGCAGTTGGCAGT
GACACAACGCGCAGGTGCTGAGCGTTGTCATCCACAACCAGAGGGTAGGG
TTAGGGTTAGGGTTAGGGCTAGTGTGCCCTACTCTACGGTCAGTGAACAC
ACACCATATCGGCATCATCACCAAGTTCATCAGCTTGGTGCATCCCACTT
TTCGAGAAGCTGTAGGCTAGCAATAGCTAATCTCCCACCTATTCTAACCT
CAAGCACGTCACTCACACAATGCCTGCTGCCGCGGGGTGCAGGCAGACAG
GGTGTGCGGCAGTGCTCAGCAATGACACCGACTTCCTCATCTACGACGCC
CCGGGCTTCATACCCTTCTGGGGCCTGGATGTCAGCCCAGAGGCAGCCCT
GGCCTTTGTGTTCTCGCGCCAGAAGCTGGCCCGCGTGCTCAACATCAGGT
TAGCAGCGCTCAACATCCCAAGCTGGCGTTTTCTTCTTTTTCTGTTGTAC
TTCGTGAGGGATGCGATCGTTAGGGGAAATGTCTGGGGTCGTGCTTTGGG
TTCGGGTTAGGGCTGGAAATTGACGAGCGCACCTTGCAAGTGTTAGGGTT
AGGGTCAAGTCGGGGGTGAAAGATGCTGTTGTGCGCGTACACACCAGCCT
ATTGATTCGCTGCAGCTGCCCAAGTTCTCATGGCCAGTGCTGCTACTGCT
GCAGTGAGTGATGCAAAGCACTGGGTGAGAGGCATATGGTAGAAGTGTTG
TTACCTTTTCAGTTGAGGCAGGGCTAGCATTGGGCGGCGCTGTTGCACGC
GGTGCCATGTCATGCCATCGTTCGCTCCTTTCCCTAAACCGCACGATTGC
GCTGCGGCTCCTGTGCTGTGGCAGTTGCGTGCTGCAAGGCACACGGTGCT
AGTCCAACACGTAGCAGAATTCTGAATTTCCATACGTAGTTGTGAAGTTT
TTGAGGCCCTGCGCGGCATCTGCAGTTGCAATGGCCCCGGTGCATGCCAA
TGATTCACCGGCACAATACATCGCGTCCTGTCAAGACCAAGGCGATAGTC
AGCAATGCCAGGGCGGGGAGGCAGACCAGCAGGGGGTTGTCGGGAGGGGA
GGGGGGGGGTGGGGGGGGGAGCCCGGCAGCTTGCATGTCAGTAGTGCTCA
GCACCCTTGCCATTGTTCGCAAATGGTAAACGCAGTCGTTTACGGCCTTG
TCACATGTGTGGCGCGACACAGCCACAACTTGAGGTTGCACACTCTCTCA
TGACCATTTGCGTTACATAGTGCTCATGGACATTGGCAGTAGCGGCGGGG
TGCTTTGCCGTAGTTGCACAGCCTGCGATCACGTTGAACAGCACTGGCGA
GTTGCGAGCAGGGTGTGCGAGGGGGTATCATGAAACGACGGCGACCAGCA
ATACCTATAGAGTGGTGACTCTGTTTCAACGCATGCGTTGCTGCCTTCGT
CGTCATCAACTTCCAATAAAACCGCAGCAATTGTATGTGTTCCTCGGTGT
TGACTCTTGCTTTTTCCGTTGTTGTTGGCTTTGATGCAACGCAGCCCAGC
CCATCTACCGCTGCTGGCTTCCTTGGTTGGTGCGTGTCCCTTGAAGTTGT
GCTCTAGCAGTGAGGTTGCGCTCTTGAAGTTGTGTCGCTCCCTGATGTGT
GACCACCTGGCTGAGTTTCGCAAGCACGTGCCAGCTTGCATTTAGCTTGC
ATGTGCGATTGCTGCATACATACAGACTCTCATGGTCAAGTCATAGTATA
TGTTGCCACATCATCACCGCATAATGTGGTCTAGGGTAGTTTGCACGTGG
TAATCATACAGGATACACGGCATAGGGGTTCATTACATGATCGATGTGGA
GCACAAGACACTTCGCAGTACCAAATACGGTGCCTCAGTAAAAAACTGTC
ATGTTTTGCCAACAGCTTTGCCAGAGTCATCAGGTCTGGCAGCTTGTGCT
TGCAACCTCGGTGAACCCTCTTCCTATGACAGCGGTAGCACCTCAGACTC
TTCTTTCATATTGTGCGATGGACACACAAGTGGTTGTTCACCTGTGCCTG
CACAAATGTATACAGTGTCACGTATGAGGCTGTTGTGACACATGTTCTAC
AGCTTGACAAGCAGTACATTGTGCAGCTCAAAAGGATGACGTGCGGCAAA
CAGCAACTGTACGCTACACAGCACAAATTGCAGCTTCAGCTTGAATGACC
GCAGCACACCTTGTCACCCGGCCTTGTCAGGTTTCTGGGCAGCTCATTCA
CTTGCAGCGGTGCATAACAACATGTCATGCTTGAGGGGGGGGGGGGGGGG
GGGGGGCAATTCTTCAAAACATGAGCCCCCGCTTGTGCTACAGATACAGC
ATCCAGCTGAACTGGGCTACACGGTTGCATCTGCCTGCTTTCGCAGAGCT
GCAGCTGTGCTGCTGCTGTGGTTGTTTGAACGGAATGTACCTGTCAATGC
AGCTCAACATGCAGTGGTTGTGGATGTGACTTGCAGTTTTGTTGATTCAG
ACCACGCAGGATACGCTCACTCTGCCCTGTTCCGAAGCACCTGTAAAAGG
GGTCAACCTCGGTGTTGTGATCCCAGCTGCAGCTGTATTGTGCTGCCCGT
TGTTTTTTCTGCAGTCATGTTCGCTTTGACTCAACTCCGACTCAGAGCAC
CACCCTCCCGTCGCATCAGATCAAGCTAGTCGCGCCAGTAGAGACGCCAA
CTGCACACCGTCAATCTTCAAAGCAGAGGCGCTCGCCGCTGGCACAGCGG
CACCGCACTTCTCATGGAACTACACACCTCGCATACTAACACCGAATCAC
TGGCGCACTGGCCTTCTACTCACTCACTCACTCAACGACTCACTCTCCCC
AGGCAACGACTACCTGCCCGACGCGCCCGACTACTGCCACGCCGCCATCC
TCTCTGGCGCCGCATGGGGCGGCCACGGCAGCTCGCGCCACAAGGGCAGC
AGGGCCGTGCTAGAGAGCGTAGGCAAGTATCTGGCCTTCAAAACGCGCCT
CACGGGCAAGGGCGCCGCCGCCGCCGCTGCTTCACCGCTCAGCCTGCCGA
CGCTGTGCGCGGAGCTCTGCGGCAGCGGCAGCGGCGGCGGCGGTAGCAGC
GGCAGCAGCGCCGCGCCGACGGCCGCGCGCAGGGCGTGCAACCGCAAGAA
GCGGCGGCGGAAGGGGAGCATCAGCGACGCCGCCGCAGCAGCGCCGCACG
ATCCCGGGAACGTTCCGGCGTCGCGCCCGGAGCGCTTCCTGGCGCTGTTG
ATGGCGTCCATTGCGCAGTATGATCTTGCTGGGGGGGAGAGGGTGACTGG
GGGGGGCGGGGGCTTGCCGCGAAGCCTCCATGTTGTACCCAGCGTTACGC
AGGCCGTGACGGAGGGGGTGTTCTGGGGCGGCGTCGTGCTGGAGGATAGT
TCCGAGGGGCGCGGAGGAGCGTGGCTGCAGGTGAGATGGTTCTGGATCGA
GAAATCAACTTTAGTAAGCAGCACAGCAACGGGGGCTCATCATATGAAAG
CTGACAGGGCAAGTTTAAAAGCTACGGGGGAACATGGCTGCGCGTGAATT
TATCGAGTGCAGGAAAGGTCGAGAGCCACAGAGTGATGGAAAAGGCAATC
ATTTTTGCTGCAAGTTTTGGGACCGTGCCAAGCCTGTTGATCAAAGAGTA
TGCTGCAGTGGTGGCTCTTGGAGGCAGAGAAGCACGGTAGTAGTGCGAGG
TCGCTGCACACACACTGTGGCATCCCTGATGTGAACTTCAAGAGCGGTAG
GTAAACCTCAACAGCTGTAGGTCACCATCCCGGCAAACCTCAGAACTTGG
CATACACACCTGCTGCCGCGTGATGGCATTTCTGAAACAAGAATAGCAGC
GTGACTCGGAGCCGTGCACAAAACAGAGAGCCTTGATAGCCGCCGTACTG
GGTGTGAGCTTGAAACTTACCCGCTGCGTGCATGCAGTTTTGCACACACG
ACCATGTGTGCACTTCGCAGCCGCAGCCACACCGCTATTGCGTGCTGCCA
CATCCTAGCACACTGGTCAGTGCGAGCGTCTTCACTTCAGCGTCTTGAAG
CAGTGTCTGTAAGTTGTGCGCATGACACGACAAGTGCAGATGCATACCAC
ATGTGCCGCAGCGTGCGCCTAAACGGGCGGTCGCTGTCACAGCGCTCAGG
GCAGCACCGCTCAACAAGTGCACGTTGTATGGGGCCGCTAACTGGGCCTG
GACCCGCAAGCGCCATCGCATGCGCTGCGCCCGTTGTGCGGGGCCTCAGT
AGTTGTCATCTATCATCATCTCGGTTTCAAGTTGAGAGCGCTGGATCATG
TGGCTTGCTGCAGACGTGCTTTGAGCTTTACCTTTGATATAGAGCGGTGG
CGATTACCATGCTGCCAATGCTGCATGAGTGGACATAACCGCTGGATGCA
CACGCGGTCGATGCGGCACCCCCCATGCGGCTCTGCGGATGCAGTTGGTT
CTGCACACAATCTGTTGTGACTTTGCACACAAACATGGTGGATGTACCTC
AAAGTATGCAGCCATGCTTGTCCTCCTATTCGCCAATGCTTTACGGCTCG
TTTGTCAGCTGACCCTCCCTCCATGCAACTTCTTTCTCTGTGCGCAACGC
AGCTGGCACCTGTACGCGCCAACCTTTATGCAGCATTGACCCCTCAAGAA
CAACCGCTTAGAGTTCAAGAGCACATAGCCATAGGCGGCAAGTTCAAGAG
TCGCTGGAGCGTCACCATCGGCACGGGAACCCTTCTTCCACAGTCGCCTT
CAGAGCAAGCTCGAGAGCAGGAGCTCTCCCAGGGCACCTCTCACAAACGC
ATCGGGGGCCACCCGTCCAGCGCAACAGCAGCAGCAGCAGCAGCTGAGCA
CTGCTGCACGCTGCTGGGCCTGGAGCGGGGCGCTGCCATCCTTGCACGAC
ACGCGCGCAACGCCCCCGCGGCAGCAGACGTGCTGGCGGCGGTGCTGACG
GCAGCAGTCGCGCAGCGCCACTCTGCAGGGCCGTCATTTCTTGGCCTGCT
GGCGTTCATTGCTGCTGCAGCGGCGCCGCCATCGGTGCCAGCTGAGTGCG
GCTGCCTGTGCGCCTGTCGCTGCGCCTGCGGCGCCGACAACGACGGCAGC
GGCGGCGGTGGCGCAGCAGCTGCGGCGGCATCGCTGGAAGGCGCGTTTGT
GTGCGAGTGGGCGGGGCTGCAGGTGGCTGCATGGCATGTCAACGCCGTTG
TGCGCGCTTGCGGCCTTGGCAACGCTACTGGACGTTCAGGTGGTGACGGC
GGTAGTGGTGGTGGTGATGGTGCTGCTTCTGCTCCTGCCACTGTCGGTGC
TTCTGCTGCCACCCCTTCTAGGCACGATGATGCTTCCGCTGCCGCTGCTG
GTGGAGCGTGGCCACCGCTGCCGCTGCTGCTGCCGCCGTGTGCGCTGCGA
CCGGCACTTGCGCTGCGGCTGTACACGCAACTGCATGGCAGCGCTGACGG
TGACGGTGGCGGGGATAGCGATGCCGCTGGCGCCAGCGATGACATTTGTG
ACATAATGGCGATGGTCAGCGCTTCGGCTTGGAGCCCGCGGTCAGTGGCC
CGGTGCTTGGGGCTGTGCGCGAAATGCAGCAGCG

Coding sequence (CDS) from alignment at Contig_33:370009..375792+

>mRNA_5946 ID=mRNA_5946|Name=jgi.p|Trimin1|348948|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1479bp|location=Sequence derived from alignment at Contig_33:370009..375792+ (Tribonema minus UTEX_B_3156 )
ATGGATCTCTGGAACGTTGGCGCTGTGGTGATGGCGGTGCGGGAGGCGGA
CCGGCGGCTGGCGCTCATTACCAGGCAGACAGGGTGTGCGGCAGTGCTCA
GCAATGACACCGACTTCCTCATCTACGACGCCCCGGGCTTCATACCCTTC
TGGGGCCTGGATGTCAGCCCAGAGGCAGCCCTGGCCTTTGTGTTCTCGCG
CCAGAAGCTGGCCCGCACCAAGGCGATAGTCAGCAATGCCAGGGCGGGGA
GGCAGACCAGCAGGGGGTTGTCGGGAGGGGAGGGGGGGGGCAACGACTAC
CTGCCCGACGCGCCCGACTACTGCCACGCCGCCATCCTCTCTGGCGCCGC
ATGGGGCGGCCACGGCAGCTCGCGCCACAAGGGCAGCAGGGCCGTGCTAG
AGAGCGTAGGCAAGTATCTGGCCTTCAAAACGCGCCTCACGGGCAAGGGC
GCCGCCGCCGCCGCTGCTTCACCGCTCAGCCTGCCGACGCTGTGCGCGGA
GCTCTGCGGCAGCGGCAGCGGCGGCGGCGGTAGCAGCGGCAGCAGCGCCG
CGCCGACGGCCGCGCGCAGGGCGTGCAACCGCAAGAAGCGGCGGCGGAAG
GGGAGCATCAGCGACGCCGCCGCAGCAGCGCCGCACGATCCCGGGAACGT
TCCGGCGTCGCGCCCGGAGCGCTTCCTGGCGCTGTTGATGGCGTCCATTG
CGCAGTATGATCTTGCTGGGGGGGAGAGGGTGACTGGGGGGGGCGGGGGC
TTGCCGCGAAGCCTCCATGTTGTACCCAGCGTTACGCAGGCCGTGACGGA
GGGGGTGTTCTGGGGCGGCGTCGTGCTGGAGGATAGTTCCGAGGGGCGCG
GAGGAGCGTGGCTGCAGTCGCCTTCAGAGCAAGCTCGAGAGCAGGAGCTC
TCCCAGGGCACCTCTCACAAACGCATCGGGGGCCACCCGTCCAGCGCAAC
AGCAGCAGCAGCAGCAGCTGAGCACTGCTGCACGCTGCTGGGCCTGGAGC
GGGGCGCTGCCATCCTTGCACGACACGCGCGCAACGCCCCCGCGGCAGCA
GACGTGCTGGCGGCGGTGCTGACGGCAGCAGTCGCGCAGCGCCACTCTGC
AGGGCCGTCATTTCTTGGCCTGCTGGCGTTCATTGCTGCTGCAGCGGCGC
CGCCATCGGTGCCAGCTGAGTGCGGCTGCCTGTGCGCCTGTCGCTGCGCC
TGCGGCGCCGACAACGACGGCAGCGGCGGCGGTGGCGCAGCAGCTGCGGC
GGCATCGCTGGAAGGCGCGTTTGTGTGCGAGTGGGCGGGGCTGCAGGTGG
TGACGGCGGTAGTGGTGGTGGTGATGGTGCTGCTTCTGCTCCTGCCACTG
TCGGTGCTTCTGCTGCCACCCCTTCTAGGCACGATGATGCTTCCGCTGCC
GCTGCTGGTGGAGCCGCTGACGGTGACGGTGGCGGGGATAGCGATGCCGC
TGGCGCCAGCGATGACATTTGTGACATAA