mRNA_5905 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348923
Unique Name	mRNA_5905
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348923 vs. uniprot
Match: A0A836CE03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE03_9STRA)

HSP 1 Score: 972 bits (2514), Expect = 0.000e+0
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 1

Query:    1 MEASNALFEGQQNGVDGALSSSASGSSSRSLDENVAGANTNNSGXXGGGILGLPRKLLRGYRKRNHKKQAKKLGKQLKRTLAQPVRLRPHRLSELSSLRLAAELDGGASTTPKLALVNVDAAIARAIEACGSEELEVDALVLQCHGKILSKAEKTTIAAAFLASRLVVLAAVGLGANEAQSLARDVTAWSNSVFSVLSTADALTQHISGPLKEQVLLRRIVLADVVERIEPLKKQKTVRHFVTRSAAAQVPLGVTTLNFGGILKLTQRTMDAVGAAPTPATVQEAAKRGGIAGGAQLVANGAGSVYQAAIVGPALADFGTDLATDGLSEALGAMEIVDGFLLGSIFIVRGAVSAAADRVTRPRLVRSLGRYLAALQVAHALHPQLRETPEAAAATAAEYDPFGTIAAAAAAGVAEEDDANNFKLKSDDELPLFDSQRTEQREWGYVSGSGEGAFRGAAHPNPNDGHNSDGGSRVIADERSGRFETADAAGVGGAAYGGGGRAVVGDSTGPSPFWQELPPLPPRPAAGPAVRIF 1599
            MEASNALFEGQQNGVDGALSSSASGSSSRSLDENVAGANTNNSGXXGGGILGLPRKLLRGYRKRNHKKQAKKLGKQLKRTLAQPVRLRPHRLSELSSLRLAAELDGGASTTPKLALVNVDAAIARAIEACGSEELEVDALVLQCHGKILSKAEKTTIAAAFLASRLVVLAAVGLGANEAQSLARDVTAWSNSVFSVLSTADALTQHISGPLKEQVLLRRIVLADVVERIEPLKKQKTVRHFVTRSAAAQVPLGVTTLNFGGILKLTQRTMDAVGAAPTPATVQEAAKRGGIAGGAQLVANGAGSVYQAAIVGPALADFGTDLATDGLSEALGAMEIVDGFLLGSIFIVRGAVSAAADRVTRPRLVRSLGRYLAALQVAHALHPQLRETPEAAAATAAEYDPFGTIAAAAAAGVAEEDDANNFKLKSDDELPLFDSQRTEQREWGYVSGSGEGAFRGAAHPNPNDGHNSDGGSRVIADERSGRFETADAAGVGGAAYGGGGRAVVGDSTGPSPFWQELPPLPPRPAAGPAVRIF
Sbjct:    1 MEASNALFEGQQNGVDGALSSSASGSSSRSLDENVAGANTNNSGXXGGGILGLPRKLLRGYRKRNHKKQAKKLGKQLKRTLAQPVRLRPHRLSELSSLRLAAELDGGASTTPKLALVNVDAAIARAIEACGSEELEVDALVLQCHGKILSKAEKTTIAAAFLASRLVVLAAVGLGANEAQSLARDVTAWSNSVFSVLSTADALTQHISGPLKEQVLLRRIVLADVVERIEPLKKQKTVRHFVTRSAAAQVPLGVTTLNFGGILKLTQRTMDAVGAAPTPATVQEAAKRGGIAGGAQLVANGAGSVYQAAIVGPALADFGTDLATDGLSEALGAMEIVDGFLLGSIFIVRGAVSAAADRVTRPRLVRSLGRYLAALQVAHALHPQLRETPEAAAATAAEYDPFGTIAAAAAAGVAEEDDANNFKLKSDDELPLFDSQRTEQREWGYVSGSGEGAFRGAAHPNPNDGHNSDGGSRVIADERSGRFETADAAGVGGAAYGGGGRAVVGDSTGPSPFWQELPPLPPRPAAGPAVRIF 533

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348923 vs. uniprot

BLAST of jgi.p|Trimin1|348923 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CE03_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_33	contig	Contig_33:163959..169324 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348923\|estExt_Genemark1.C_Ctg_330019
Hectar predicted targeting category	other localisation
TranscriptId	349245
Track	FilteredModels1
ProteinId	348923

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348923	gene_5905	Tribonema minus UTEX_B_3156	gene	Contig_33 163959..169324 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348923	Trimin1\|348923\|estExt_Genemark1.C_Ctg_330019	Tribonema minus UTEX_B_3156	polypeptide	Contig_33 163959..168604 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5905_1	exon_5905_1	Tribonema minus UTEX_B_3156	exon	Contig_33 163959..164221 +
exon_5905_2	exon_5905_2	Tribonema minus UTEX_B_3156	exon	Contig_33 164466..164593 +
exon_5905_3	exon_5905_3	Tribonema minus UTEX_B_3156	exon	Contig_33 165417..165640 +
exon_5905_4	exon_5905_4	Tribonema minus UTEX_B_3156	exon	Contig_33 166162..166305 +
exon_5905_5	exon_5905_5	Tribonema minus UTEX_B_3156	exon	Contig_33 167026..167271 +
exon_5905_6	exon_5905_6	Tribonema minus UTEX_B_3156	exon	Contig_33 167745..167867 +
exon_5905_7	exon_5905_7	Tribonema minus UTEX_B_3156	exon	Contig_33 168131..169324 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5905	CDS_5905	Tribonema minus UTEX_B_3156	CDS	Contig_33 163959..164221 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5905	UTR3_5905	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_33 168605..169324 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_33:163959..169324+
coding sequence from alignment at Contig_33:163959..169324+

spliced messenger RNA

>mRNA_5905 ID=mRNA_5905|Name=jgi.p|Trimin1|348923|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2322bp|location=Sequence derived from alignment at Contig_33:163959..169324+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGCCTCCAACGCTCTTTTCGAAGGCCAGCAGAATGGCGTAGACGG
CGCGCTCAGCAGCAGCGCCAGCGGGAGCAGCTCTAGGAGCTTGGATGAGA
ATGTGGCTGGCGCCAACACTAACAACAGTGGTAATGGCGGTGGTGGCATC
CTGGGACTGCCCCGGAAGCTTCTCAGAGGTTATCGCAAGCGCAATCACAA
AAAGCAGGCCAAGAAGCTCGGCAAGCAGCTCAAGAGGACGCTGGCACAGC
CCGTGCGCCTCAGGCCTCACCGTCTATCGGAGCTCTCTTCCCTGCGCCTT
GCCGCGGAGCTGGACGGCGGCGCCAGCACCACTCCCAAGCTTGCACTGGT
GAACGTTGACGCCGCCATCGCCAGGGCGATTGAGGCATGTGGCTCAGAGG
AGCTGGAAGTGGACGCGCTGGTGCTGCAGTGTCACGGCAAAATCCTGAGC
AAGGCTGAGAAGACTACCATAGCAGCAGCCTTTCTGGCGTCGCGACTGGT
GGTCCTAGCAGCTGTGGGTCTGGGTGCGAATGAGGCGCAGTCGCTGGCCA
GGGACGTCACTGCGTGGTCTAACTCAGTGTTCAGCGTGCTGAGCACTGCT
GACGCGCTTACACAGCACATCTCAGGCCCTCTGAAAGAGCAGGTGCTACT
GCGGCGCATCGTGCTGGCGGATGTTGTCGAGCGCATTGAGCCTCTCAAGA
AGCAGAAGACGGTTCGCCACTTTGTCACCAGGAGTGCGGCGGCTCAGGTG
CCGCTAGGGGTCACAACGCTCAACTTCGGCGGCATTCTGAAGCTCACGCA
GCGCACCATGGACGCAGTCGGCGCCGCACCCACCCCCGCAACGGTGCAGG
AGGCGGCCAAGCGTGGTGGCATTGCAGGTGGTGCCCAGCTCGTGGCCAAT
GGCGCCGGCAGCGTTTACCAGGCGGCCATTGTGGGGCCTGCGCTGGCTGA
TTTCGGCACGGATTTGGCCACGGATGGTCTGTCAGAGGCGCTGGGCGCAA
TGGAGATTGTGGATGGCTTTCTTCTGGGGTCCATCTTCATTGTGCGCGGC
GCCGTGTCCGCAGCAGCAGATAGAGTCACTCGCCCACGCCTCGTGCGCAG
CCTGGGCCGCTACCTGGCTGCTCTACAGGTGGCGCACGCCCTCCACCCCC
AGCTGCGTGAAACCCCCGAAGCCGCCGCCGCCACCGCCGCAGAATACGAC
CCCTTCGGCACCATCGCCGCCGCCGCGGCCGCCGGCGTCGCCGAGGAGGA
CGACGCCAACAACTTCAAGTTGAAGTCCGACGACGAGCTGCCTCTGTTCG
ACTCGCAGCGCACCGAGCAGCGCGAGTGGGGGTATGTGAGCGGTAGCGGA
GAGGGGGCATTCAGGGGGGCCGCGCACCCCAACCCCAACGACGGGCACAA
CTCGGACGGCGGCTCACGCGTCATTGCCGACGAGCGCAGCGGCCGCTTTG
AAACTGCTGATGCTGCCGGCGTTGGCGGCGCTGCGTACGGCGGCGGCGGC
AGGGCGGTGGTGGGTGACAGCACCGGGCCGTCGCCGTTTTGGCAGGAGCT
GCCGCCGCTGCCGCCGCGCCCGGCTGCCGGGCCCGCTGTGCGCATCTTCT
GAGTAGTGAGGCAGCGCTGCTCAGTAACGCGTGGCATCTGTCAGGCGCGC
AGGTAAACAAAAGCGGCGTAGAAAGAGAGGGTGCCTTTGGGCAGGCTGCA
GGGCAAGCCCTACTACATACCCAGCTAAGCTGCCGATACTTGCCAATCCT
GCTTTTGTACTTGGTATACCTATGTGCCCCTGCTACAGTCGGTGGCAAGA
CACCAGACTCCGGTATCTACTACACGGTAGTTGGGGGCGTTTTGGACCCC
CAGTGTCAGCGCTCATTTAAGCTTGCGGGCAGTGTTCAGCCGGTAGGCCT
GCTACCTACACACCCTCAGAGTTCTTCAAGGAGGATGGTGTGCACGCAGG
GGTTGTTTTTGTTTGACCTGTAGAACGGGCTCTACTGCAGTGGCGTGTGT
GGGCCTACACCATCATCATGCGCTATCATGCGCTTCCGCTCACATGCTGA
GGCTGCTGCACAGCTCGTACATGTGGCATCCACGCGATCGACAGGCAAAA
GTCTGATGGACAGTCCGGCCTGCTCCAAAGGGAGCCGTTTTGTAGTGATA
GTGCGTTGAGCGCTGTGGTTGGCACGGGCTCATTGCTACTACAAAGTTGA
AGTTTCAGCGACACATGTTTTGATGTGCGCGCCGTAACCTTGAAGTTCGT
AAGCTGCCGCTGTGCACCTGCCCTCGAGCGGTTTCGAGCTCGCCATGTGA
ATACCATCATACAACACACGCA

protein sequence of jgi.p|Trimin1|348923

>Trimin1|348923|estExt_Genemark1.C_Ctg_330019 ID=Trimin1|348923|estExt_Genemark1.C_Ctg_330019|Name=jgi.p|Trimin1|348923|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=534bp
MEASNALFEGQQNGVDGALSSSASGSSSRSLDENVAGANTNNSGNGGGGI
LGLPRKLLRGYRKRNHKKQAKKLGKQLKRTLAQPVRLRPHRLSELSSLRL
AAELDGGASTTPKLALVNVDAAIARAIEACGSEELEVDALVLQCHGKILS
KAEKTTIAAAFLASRLVVLAAVGLGANEAQSLARDVTAWSNSVFSVLSTA
DALTQHISGPLKEQVLLRRIVLADVVERIEPLKKQKTVRHFVTRSAAAQV
PLGVTTLNFGGILKLTQRTMDAVGAAPTPATVQEAAKRGGIAGGAQLVAN
GAGSVYQAAIVGPALADFGTDLATDGLSEALGAMEIVDGFLLGSIFIVRG
AVSAAADRVTRPRLVRSLGRYLAALQVAHALHPQLRETPEAAAATAAEYD
PFGTIAAAAAAGVAEEDDANNFKLKSDDELPLFDSQRTEQREWGYVSGSG
EGAFRGAAHPNPNDGHNSDGGSRVIADERSGRFETADAAGVGGAAYGGGG
RAVVGDSTGPSPFWQELPPLPPRPAAGPAVRIF*

mRNA from alignment at Contig_33:163959..169324+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5905 ID=mRNA_5905|Name=jgi.p|Trimin1|348923|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5366bp|location=Sequence derived from alignment at Contig_33:163959..169324+ (Tribonema minus UTEX_B_3156 )
ATGGAAGCCTCCAACGCTCTTTTCGAAGGCCAGCAGAATGGCGTAGACGG
CGCGCTCAGCAGCAGCGCCAGCGGGAGCAGCTCTAGGAGCTTGGATGAGA
ATGTGGCTGGCGCCAACACTAACAACAGTGGTAATGGCGGTGGTGGCATC
CTGGGACTGCCCCGGAAGCTTCTCAGAGGTTATCGCAAGCGCAATCACAA
AAAGCAGGCCAAGAAGCTCGGCAAGCAGCTCAAGAGGACGCTGGCACAGC
CCGTGCGCCTCAGGTAGGAATGGTAATTCCGAGTTGCCAGCAAAGCGATG
TTGTTGTGCTAAAACAGCGACAAGAGGAAAGGTTGTCGTCAGCGCCGTCT
TCAACATTTGTTACACGGAATGATGCTTCATCCTTGCGAGACGGTGTTCA
TGCCGCACACGCACTTCGCCCAACACGCCGCAGCGGTGAGTTGTGCAGCC
GCTCCTCGAAGTAAAAAAACAGTCTGCAGACCACAATGCTCTACTCTGCT
GTTACAGGCCTCACCGTCTATCGGAGCTCTCTTCCCTGCGCCTTGCCGCG
GAGCTGGACGGCGGCGCCAGCACCACTCCCAAGCTTGCACTGGTGAACGT
TGACGCCGCCATCGCCAGGGCGATTGAGGCATGTGGTGTGGAGGTGGTGC
ACAGAACAACACTGGGTCCGAAGGATGCCCGCGCGGCTGCACTGGCCTCA
GGCAAGTGGAATTGTTATGCTGCTTCCTGTACCGTGTTGTACTGCATCTG
TGTGCATTGCGAACCAAGCAGGCTAGGACAGGCTAGGGCCGCCAGTAGGT
AGGTGTTGCACCTAGTGTTGAGAGACAGCAAAGCCGCGCGTCAGCACAGA
TGCGTTGTGCAGACTATTAGCTGATATGCTGCTACCTCGAGGTGCGGCAG
TGCAGCATGTTGCACTGAACATCACAGAGCACCCCCGGGCCGGTTTCTTC
TGCAAAGCTGCAATATCGATTGAGGCATGTGGTGTGGAGGTGGTGCACAG
AACAACTCTGGGTCCGAAGGATGCCCGCGCGGCTGCACTGGCCTCAGGCA
AGTGGAATTGTTATGCTGCTTCCTGTACTGTGTTGTACTGCATCTGTGTG
CATTGCGAACCAAGCAGGCTAGGACAGGCTAGGGCCGCCAGTAGGTAGGT
GTTGCACCTAGTGTTGAGAGACAGCAAAGCCGCGCGTCAGGACAGATGCG
TTGTGCAGACTATTAGCTGATATGCTGCTACCTCGAGGTGCGGCAGTGCA
GCATGTTGCACTGAACATCACAGAGCACCCCCGGGCCGGTTTCTTCTGCA
AAGCTGCAATATCGTTGTTATGGCTTGCGCAGCATGTGCAGCACATACAT
CATTCAGCATGCATGGGTATCAGCACAACTTCCCATGGCGAACTGCTGCC
CTGCTTCATCTTCAACTTTAGTCTCAACTCTACATGACTGTCTCTCAAAT
CTGCGCAGGCTCAGAGGAGCTGGAAGTGGACGCGCTGGTGCTGCAGTGTC
ACGGCAAAATCCTGAGCAAGGCTGAGAAGACTACCATAGCAGCAGCCTTT
CTGGCGTCGCGACTGGTGGTCCTAGCAGCTGTGGGTCTGGGTGCGAATGA
GGCGCAGTCGCTGGCCAGGGACGTCACTGCGTGGTCTAACTCAGTGTTCA
GCGTGCTGAGCACTGCTGACGCGCTTACACAGGTCAGTGGCAAAGTTAGG
CTACCCTGTCTGTATCAGCATTTGAGTACAAGTGGTTCTTGAAGTTGAAC
TTGATGGGATGGCTCCGGCATTCACAGTGTGCAGTGCAGCGTGTTGCTCA
ATGAGTGCAGATATGATATCACGTACATGGTCATGGTAGTGCATGTCAGT
TGTGGCGATGGTTGACATACGTGGTGGCGTGACGATGCGCTCATCACGAG
GCGTCATTGGGCCAAGGGGGACGTCAGTTTTCGCCACTATTGAGGGCCAC
ACTCATGCCATGTTGGACCTGTTGCTGTTTAAAGTGCACGCAACTCGTGC
ATACTTGATTGGCTGTCCTAGTGGCTTTCCAAAGCGCCCACACATCATAC
GCATACTTGATCGGCCGTTTTAGCGTTGTGTTCAACGAATGGCAACCGTG
TACACCTGATGAAACCATTGTGCTTGTCCTCTTTTGTTCCATCCCAAGGC
AATGATGTGTATCTGATGACACCACTGCACCCGCCCTCTTCTGCTCTGTT
CAGCACATCTCAGGCCCTCTGAAAGAGCAGGTGCTACTGCGGCGCATCGT
GCTGGCGGATGTTGTCGAGCGCATTGAGCCTCTCAAGAAGCAGAAGACGG
TTCGCCACTTTGTCACCAGGAGTGCGGCGGCTCAGGTGCCGCTAGGGGTG
AGTGGGGCGTGATTACATTTATGATATACCCTAAAGGAGTGTAAACACTG
ACAGGAACTTACAACATCGTGAGAGTGAATTTATACATGTGACCACACAA
TGGGCACGTCCTCAGTGAAGTTATGTTGGTTTTGTTTCAGGTAAGTGCAA
TTAGCGTGGGGTTTAGGTTGGCAGCGGTTTTTAAAGATCCTCATTAGGTG
GGTATGAGGCGGTACATAGCCCACACGTTCACTGCAGTGGCATGTTACCA
TTCTTAGGTGCACTGCAGGTGCACTGTGACTATAGAAAGGTCACGACGCT
GAATGCATTTTGACATGTGACAACCAGGCCTGCACCCCAAGCTGAGGCGT
GCAGCATCTAAAGCCCACGTTGTAGGTTGAACACCAGCACAGTCATGGAC
CAAGTGCTGTGTGTTTCCATATGCGCCCTCCCTGTTCTGTTGTGCCAGCA
GGTGCCAATGCTCAGCATCTCTGGGATGTTCAAGCTCACACACATGGTTG
GCTGGTCACTTGTTACCTTAATGCTGCCTCATCTGTAGCCTTGACCTTAA
CCCGCACCCCTCTCACCTCTTTATGGCAGGTGACAACGCTCAATTTTGGC
GGCATCCTCAAGCGCACGCAGCGCACCATGATCGCAGTTGACAGTGCCCT
CATATTGTGTTCACCCGTAGCCTCAAGCTCCCCCCCCCCTCCCTCCCCCC
CCCTGCGCTTTTGACAGGTCACAACGCTCAACTTCGGCGGCATTCTGAAG
CTCACGCAGCGCACCATGGACGCAGTCGGCGCCGCACCCACCCCCGCAAC
GGTGCAGGAGGCGGCCAAGCGTGGTGGCATTGCAGGTGGTGCCCAGCTCG
TGGCCAATGGCGCCGGCAGCGTTTACCAGGCGGCCATTGTGGGGCCTGCG
CTGGCTGATTTCGGCACGGATTTGGCCACGGATGGTCTGTCAGAGGCGCT
GGGCGCAATGGAGGTGAGACTCCGGTAGCATTTGATTGTAATGGTGAACA
TGGTTTGAGGGCAGATGTGTTGTTATCAGCGCAGCTCGCAGTGCGATGCG
TGCCCTGTAGGGTTGCAAAAAAGCGTATTTTGAAGTTTATTTTGGAGTTC
AAGTGCCCCTTTTGTGGCAGACTGTATGCTCAAAATTGAGCAGACTCACC
GCATGCCCCACAAATACACCCTTCACGCAGCATACTATCATGTTGAAGTT
TGCTCACGAAGTATTCCTGGTTGCCAAATACGCCCCAAATGCGCCATCTT
TGTGTGGCCAAAGACATTTTTTTTGCAACCCTAGTGCCCTGTGGCTGTTG
TGTGCCTTTGAAGGGCACAGAAATGGGCACATTTTACATGTTCTGAACAA
ACCTCAGAGGGTGTCAGAAGGAGTGTCACAGCCACTGACTCAGCGCCATT
GCCCCTCGTCCATTCTCCCCCCCTTTTTTCACACAGATTGTGGATGGCTT
TCTTCTGGGGTCCATCTTCATTGTGCGCGGCGCCGTGTCCGCAGCAGCAG
ATAGAGTCACTCGCCCACGCCTCGTGCGCAGCCTGGGCCGCTACCTGGCT
GCTCTACAGGTAATGAGGATAGCTCAAATATGTTGAAGCTTTATGTCATG
GACTTCATGTGCATTGTTGCGCAGGATCGTGCACCGTTGTGCGTCAGCTG
TTCAACACTGTTAGTCTCGCTGTGCGTATGACTACCCAATCTGTACATAT
CTAGCTGGTGCACTGCAGCAGTCATCGTCTCTGATAGCATGCCTTCGTCC
TGTCTCAACCATTAGCCACAATCCTACAATTTACATACCCTAACCACATA
CCTACCTACCCCCATACCACAGGTGGCGCACGCCCTCCACCCCCAGCTGC
GTGAAACCCCCGAAGCCGCCGCCGCCACCGCCGCAGAATACGACCCCTTC
GGCACCATCGCCGCCGCCGCGGCCGCCGGCGTCGCCGAGGAGGACGACGC
CAACAACTTCAAGTTGAAGTCCGACGACGAGCTGCCTCTGTTCGACTCGC
AGCGCACCGAGCAGCGCGAGTGGGGGTATGTGAGCGGTAGCGGAGAGGGG
GCATTCAGGGGGGCCGCGCACCCCAACCCCAACGACGGGCACAACTCGGA
CGGCGGCTCACGCGTCATTGCCGACGAGCGCAGCGGCCGCTTTGAAACTG
CTGATGCTGCCGGCGTTGGCGGCGCTGCGTACGGCGGCGGCGGCAGGGCG
GTGGTGGGTGACAGCACCGGGCCGTCGCCGTTTTGGCAGGAGCTGCCGCC
GCTGCCGCCGCGCCCGGCTGCCGGGCCCGCTGTGCGCATCTTCTGAGTAG
TGAGGCAGCGCTGCTCAGTAACGCGTGGCATCTGTCAGGCGCGCAGGTAA
ACAAAAGCGGCGTAGAAAGAGAGGGTGCCTTTGGGCAGGCTGCAGGGCAA
GCCCTACTACATACCCAGCTAAGCTGCCGATACTTGCCAATCCTGCTTTT
GTACTTGGTATACCTATGTGCCCCTGCTACAGTCGGTGGCAAGACACCAG
ACTCCGGTATCTACTACACGGTAGTTGGGGGCGTTTTGGACCCCCAGTGT
CAGCGCTCATTTAAGCTTGCGGGCAGTGTTCAGCCGGTAGGCCTGCTACC
TACACACCCTCAGAGTTCTTCAAGGAGGATGGTGTGCACGCAGGGGTTGT
TTTTGTTTGACCTGTAGAACGGGCTCTACTGCAGTGGCGTGTGTGGGCCT
ACACCATCATCATGCGCTATCATGCGCTTCCGCTCACATGCTGAGGCTGC
TGCACAGCTCGTACATGTGGCATCCACGCGATCGACAGGCAAAAGTCTGA
TGGACAGTCCGGCCTGCTCCAAAGGGAGCCGTTTTGTAGTGATAGTGCGT
TGAGCGCTGTGGTTGGCACGGGCTCATTGCTACTACAAAGTTGAAGTTTC
AGCGACACATGTTTTGATGTGCGCGCCGTAACCTTGAAGTTCGTAAGCTG
CCGCTGTGCACCTGCCCTCGAGCGGTTTCGAGCTCGCCATGTGAATACCA
TCATACAACACACGCA

Coding sequence (CDS) from alignment at Contig_33:163959..169324+

>mRNA_5905 ID=mRNA_5905|Name=jgi.p|Trimin1|348923|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1602bp|location=Sequence derived from alignment at Contig_33:163959..169324+ (Tribonema minus UTEX_B_3156 )
ATGGAAGCCTCCAACGCTCTTTTCGAAGGCCAGCAGAATGGCGTAGACGG
CGCGCTCAGCAGCAGCGCCAGCGGGAGCAGCTCTAGGAGCTTGGATGAGA
ATGTGGCTGGCGCCAACACTAACAACAGTGGTAATGGCGGTGGTGGCATC
CTGGGACTGCCCCGGAAGCTTCTCAGAGGTTATCGCAAGCGCAATCACAA
AAAGCAGGCCAAGAAGCTCGGCAAGCAGCTCAAGAGGACGCTGGCACAGC
CCGTGCGCCTCAGGCCTCACCGTCTATCGGAGCTCTCTTCCCTGCGCCTT
GCCGCGGAGCTGGACGGCGGCGCCAGCACCACTCCCAAGCTTGCACTGGT
GAACGTTGACGCCGCCATCGCCAGGGCGATTGAGGCATGTGGCTCAGAGG
AGCTGGAAGTGGACGCGCTGGTGCTGCAGTGTCACGGCAAAATCCTGAGC
AAGGCTGAGAAGACTACCATAGCAGCAGCCTTTCTGGCGTCGCGACTGGT
GGTCCTAGCAGCTGTGGGTCTGGGTGCGAATGAGGCGCAGTCGCTGGCCA
GGGACGTCACTGCGTGGTCTAACTCAGTGTTCAGCGTGCTGAGCACTGCT
GACGCGCTTACACAGCACATCTCAGGCCCTCTGAAAGAGCAGGTGCTACT
GCGGCGCATCGTGCTGGCGGATGTTGTCGAGCGCATTGAGCCTCTCAAGA
AGCAGAAGACGGTTCGCCACTTTGTCACCAGGAGTGCGGCGGCTCAGGTG
CCGCTAGGGGTCACAACGCTCAACTTCGGCGGCATTCTGAAGCTCACGCA
GCGCACCATGGACGCAGTCGGCGCCGCACCCACCCCCGCAACGGTGCAGG
AGGCGGCCAAGCGTGGTGGCATTGCAGGTGGTGCCCAGCTCGTGGCCAAT
GGCGCCGGCAGCGTTTACCAGGCGGCCATTGTGGGGCCTGCGCTGGCTGA
TTTCGGCACGGATTTGGCCACGGATGGTCTGTCAGAGGCGCTGGGCGCAA
TGGAGATTGTGGATGGCTTTCTTCTGGGGTCCATCTTCATTGTGCGCGGC
GCCGTGTCCGCAGCAGCAGATAGAGTCACTCGCCCACGCCTCGTGCGCAG
CCTGGGCCGCTACCTGGCTGCTCTACAGGTGGCGCACGCCCTCCACCCCC
AGCTGCGTGAAACCCCCGAAGCCGCCGCCGCCACCGCCGCAGAATACGAC
CCCTTCGGCACCATCGCCGCCGCCGCGGCCGCCGGCGTCGCCGAGGAGGA
CGACGCCAACAACTTCAAGTTGAAGTCCGACGACGAGCTGCCTCTGTTCG
ACTCGCAGCGCACCGAGCAGCGCGAGTGGGGGTATGTGAGCGGTAGCGGA
GAGGGGGCATTCAGGGGGGCCGCGCACCCCAACCCCAACGACGGGCACAA
CTCGGACGGCGGCTCACGCGTCATTGCCGACGAGCGCAGCGGCCGCTTTG
AAACTGCTGATGCTGCCGGCGTTGGCGGCGCTGCGTACGGCGGCGGCGGC
AGGGCGGTGGTGGGTGACAGCACCGGGCCGTCGCCGTTTTGGCAGGAGCT
GCCGCCGCTGCCGCCGCGCCCGGCTGCCGGGCCCGCTGTGCGCATCTTCT
GA