mRNA_5878 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|160549
Unique NamemRNA_5878
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A836CL01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL01_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 2.200e-158
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1 
Query:    1 MCHPIFFRSCNPAGNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSALHYACLCALTLQDLIQLD 621
            MCHPIFFRSCNPAGNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSALHYACLCALTLQDLIQLD
Sbjct:    1 MCHPIFFRSCNPAGNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSALHYACLCALTLQDLIQLD 207
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A836CFD3_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD3_9STRA)

HSP 1 Score: 204 bits (518), Expect = 5.380e-62
Identity = 101/174 (58.05%), Postives = 124/174 (71.26%), Query Frame = 1 
Query:   40 GNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKV 561
            G+WY WG+LY   +     Y NT+  L  AF+ VI IF  + APV+FQLNIN NNG DD  PF+ +WPGTVGL SVAIT+YNRA STP+HQ S  F D F  AY QV ALT LPIWVAETGTTS  TDKP W+++ F  IAL FP+V +VT+F+ +K+ EGV TDWD++   +V
Sbjct:  114 GDWYPWGLLYDPYNTGS--YLNTKADLTLAFRHVINIFRAHGAPVKFQLNINGNNGLDDPRPFSDFWPGTVGLESVAITSYNRAYSTPAHQYSLSFYDGFYDAYTQVAALTDLPIWVAETGTTSYGTDKPAWLRQMFTSIALDFPRVTEVTFFMLNKVNEGVYTDWDLNTWEEV 285
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A835YUE1_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE1_9STRA)

HSP 1 Score: 201 bits (510), Expect = 6.760e-62
Identity = 99/179 (55.31%), Postives = 125/179 (69.83%), Query Frame = 1 
Query:   40 GNWYQWGILY---GSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSA 567
            G+WY WGILY   G R N + Q       L+DAF  VI +F +  +PV+FQL+INANNG  DK PF+ +WPGT GL +V+IT+YNRA STP HQ S+ F   F+ AY QV  LT LPIWVAET T+S  TDKP W+ +A+  IAL FP+VVQVTWFL++K+ EG +TDWD++    V A
Sbjct:   33 GDWYPWGILYEYQGDRGNSRSQ-------LRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRA 204
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A836CDM6_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDM6_9STRA)

HSP 1 Score: 204 bits (518), Expect = 6.980e-62
Identity = 98/176 (55.68%), Postives = 125/176 (71.02%), Query Frame = 1 
Query:   40 GNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSA 567
            G+WY WG+LY    +    Y NT+  L  AF+ VI IF +N APV+FQLNINA NG DD  PF+ +WPGT+GL SVAIT+YNRA STP+HQ ++ F D F   Y QV ALT LPIWVAETGTTS  TDKP W+ + F  +AL FP+V QVT+F+ +K+ E V+TDWD++    ++A
Sbjct:  119 GDWYPWGLLYDP--DKIGVYANTRANLSLAFRHVISIFRENGAPVEFQLNINAQNGLDDPRPFSAFWPGTLGLESVAITSYNRAFSTPNHQYTESFYDGFHGPYKQVAALTDLPIWVAETGTTSYGTDKPAWLMDMFTSLALDFPRVRQVTFFMLNKINENVLTDWDLNTEVDINA 292
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A835Z228_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z228_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.240e-58
Identity = 92/177 (51.98%), Postives = 119/177 (67.23%), Query Frame = 1 
Query:   37 AGNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSA 567
            AG+WY WG+LY  R  P     NT   L+ A +RVI IF    APV FQ+N+N +NG+DD  P A  WPG  GL +VAIT+YNRA STP+HQ ++ FRD  +  Y QV  LT LPIW+AET TTS  TDKP W+++ F D+A  FP+V QVT+FL +K+ EG + DWD++   +V A
Sbjct:   11 AGDWYPWGLLY--RQRPNGVGANTVALLRQALQRVISIFRTRGAPVLFQMNLNDHNGFDDPRPMAELWPGDEGLDAVAITSYNRAFSTPNHQYTRSFRDGLTPMYQQVTELTKLPIWIAETATTSFGTDKPAWLRQMFNDVARAFPRVTQVTFFLYNKVVEGKLLDWDLNTPEEVQA 185
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A835YT36_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT36_9STRA)

HSP 1 Score: 194 bits (494), Expect = 5.460e-58
Identity = 94/169 (55.62%), Postives = 122/169 (72.19%), Query Frame = 1 
Query:   40 GNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMH 546
            GNWYQWG+LY +      +  NT  +L+++F R+I IF  + AP+ FQLNIN+NNGYDD  PF+ +WPGT GLSSVAIT+YNRA STP+H  S+ F + F A+Y Q      LP+WVAETGTTS  TDKP W ++AF+ IAL FP+V QVT+FL +K+ EG   DWD++
Sbjct:  150 GNWYQWGLLYNAHDPTADK--NTVHQLRESFSRIIGIFEHHGAPIDFQLNINSNNGYDDPRPFSDFWPGTQGLSSVAITSYNRAFSTPAHNFSESFGEGFQASYYQAN----LPVWVAETGTTSYGTDKPDWYRDAFKTIALQFPRVEQVTFFLYNKVLEGKNLDWDLN 312
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A835Z8N1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.330e-22
Identity = 61/176 (34.66%), Postives = 91/176 (51.70%), Query Frame = 1 
Query:   40 GNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSA 567
            G+WY WGI           + +  +  K A+K ++ IF + KAPVQFQ   N +N  DDKTPF  ++ G   +  V  + YN A   P+H  S  F       YNQ+   T   + ++E  TTS   DKP W+K+ +  IA  F ++  V WFL +K  +G   +WD+++G +  A
Sbjct:  220 GDWYPWGIYVDGTL-----HTDLLSDFKAAYKHIVTIFRNAKAPVQFQQGYNNSNPRDDKTPFKNFYVGDDYVDMVCFSLYNFA-GIPNHS-SGTFTKLAGDFYNQMTLATSKDLCISEMSTTSYGVDKPAWIKDTWSSIANQFTRITTVNWFLENK-PDG---NWDLNNGPEQQA 384
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A835Z2E4_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2E4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.320e-17
Identity = 54/174 (31.03%), Postives = 87/174 (50.00%), Query Frame = 1 
Query:   64 LYGSRSNPKPQYPNTQTRL---KDAFKRVIKIFTDNKAPVQFQLNINANN--GYDDKTPFATWWPGTVGLSSVAITAY-NRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSA 567
            L G  + P   YP T+ +L   K A++RV+ ++ + +APV+FQL   A N  G  D+TPF+ + PG      V +  Y N A   PS       +++ +            P+++ E   T    D+P W++EA+R +AL FP+V  V+WFL  K        W +H+  ++ A
Sbjct:   32 LNGEGTYPWSLYPYTREKLATFKRAWRRVVSVYREERAPVKFQLAFMARNPGGDKDRTPFSAFNPGRDYFDQVGVDVYVNAAKRMPS------LKEKLNDGIYAQLLWFGKPVFIGEMSVTVSVPDRPAWIREAWRSLALDFPRVKYVSWFLEGK-SPAPTRSWGLHNQAEIDA 198
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BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A835ZIN4_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIN4_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 6.440e-17
Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 1 
Query:   70 GSRSNPKPQYPNTQTRL---KDAFKRVIKIFTDNKAPVQFQLNINANN--GYDDKTPFATWWPGTVGLSSVAITAY-NRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSA 567
            G ++ P   YP T+ +L   K A++RV+ ++ + +APV+FQL   A N  G  D+TPF+ + PG      V +  Y N A   PS ++     D     Y Q+      P+++ E   T    D+P W++EA+R +AL FP+V  V WFL DK        W +H   ++ A
Sbjct:  240 GEKTYPWSLYPYTREKLATFKRAWRRVVSVYREERAPVKFQLAFMAKNPGGDKDRTPFSAFNPGQDYFHQVGVDVYVNAAKRMPSLKEK--LNDN---VYAQLLWFGK-PVFIGEMSVTVSVPDRPAWIREAWRSLALDFPRVKYVNWFLEDK-SPAPTRSWGLHSRAEIDA 404
[Close]
BLAST of jgi.p|Trimin1|160549 vs. uniprot
Match: A0A836CEH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH9_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.160e-16
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 1 
Query:   37 AGNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTP-LPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHD 549
              +WY WG L         +  NT+   K AF  V+ +     A  ++Q++    N  +D TP   ++ G   +  + ++AYN  C T  + D +     F + Y QV +  P   + +AE GTTS    KP W+K+A++ +A  F +V+ + WFL +K+   +  DWD+++
Sbjct:  277 TADWYPWGAL---------RLGNTKEEFKVAFVHVVTVLRSTGANFKYQMSYAMKNSGNDPTPLREFYVGKQYVDQICVSAYN-LCGTK-YPDMRSLATIFGSFYYQVTSFAPGTKLCMAEMGTTSYCGGKPQWIKDAWKSLAYQFTEVININWFLENKVAL-LGVDWDLNN 436
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160549 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A836CL01_9STRA2.200e-158100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFD3_9STRA5.380e-6258.05Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A835YUE1_9STRA6.760e-6255.31Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A836CDM6_9STRA6.980e-6255.68Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z228_9STRA1.240e-5851.98Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YT36_9STRA5.460e-5855.62Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z8N1_9STRA3.330e-2234.66Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z2E4_9STRA1.320e-1731.03Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZIN4_9STRA6.440e-1733.14Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CEH9_9STRA1.160e-1629.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_13contigContig_13:1477565..1481559 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|160549|e_gw1.13.212.1
DescriptionBelongs to the glycosyl hydrolase 26 family
COG categoryG
Max annot lvl2|Bacteria
EggNOG OGsCOG4124@1|root,COG4124@2|Bacteria
Evalue1.74e-12
Seed ortholog1123400.KB904752_gene841
Hectar predicted targeting categoryother localisation
TranscriptId160871
TrackFilteredModels1
ProteinId160549
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160549gene_5878Tribonema minus UTEX_B_3156 geneContig_13 1477565..1481559 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160549Trimin1|160549|e_gw1.13.212.1Tribonema minus UTEX_B_3156 polypeptideContig_13 1477565..1481559 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5878_4exon_5878_4Tribonema minus UTEX_B_3156 exonContig_13 1477565..1477788 -
exon_5878_3exon_5878_3Tribonema minus UTEX_B_3156 exonContig_13 1479285..1479327 -
exon_5878_2exon_5878_2Tribonema minus UTEX_B_3156 exonContig_13 1479758..1479909 -
exon_5878_1exon_5878_1Tribonema minus UTEX_B_3156 exonContig_13 1481355..1481559 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5878CDS_5878Tribonema minus UTEX_B_3156 CDSContig_13 1481355..1481559 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5878 ID=mRNA_5878|Name=jgi.p|Trimin1|160549|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=624bp|location=Sequence derived from alignment at Contig_13:1477565..1481559- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGTCATCCCATTTTTTTCCGTTCATGCAACCCTGCAGGCAACTGGTA
CCAGTGGGGTATACTGTATGGGTCACGCTCTAATCCGAAACCACAGTATC
CCAACACCCAAACTCGGCTGAAGGACGCATTCAAACGCGTCATCAAGATA
TTTACGGACAACAAGGCGCCAGTTCAGTTTCAGTTGAACATCAACGCCAA
CAATGGGTATGATGACAAGACTCCCTTTGCCACCTGGTGGCCCGGCACAG
TTGGGCTGTCATCTGTTGCCATCACCGCCTACAACCGTGCGTGCTCCACC
CCAAGCCACCAGGACTCCAAGCCGTTCAGGGACAGGTTCTCCGCTGCGTA
CAACCAGGTCAAGGCGTTGACACCCCTGCCTATCTGGGTTGCTGAGACAG
GCACAACCTCCTGTAAGACGGACAAGCCCACGTGGGTGAAGGAGGCGTTC
AGGGATATAGCTCTGCTGTTCCCACAAGTGGTCCAGGTCACCTGGTTCCT
GACCGACAAGCTGCAGGAGGGGGTGGTCACCGATTGGGACATGCATGATG
GCACCAAAGTGAGCGCACTCCATTACGCGTGTTTATGTGCATTAACTCTT
CAAGATCTAATACAGCTTGACTGA
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protein sequence of jgi.p|Trimin1|160549

>Trimin1|160549|e_gw1.13.212.1 ID=Trimin1|160549|e_gw1.13.212.1|Name=jgi.p|Trimin1|160549|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=208bp
MCHPIFFRSCNPAGNWYQWGILYGSRSNPKPQYPNTQTRLKDAFKRVIKI
FTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACST
PSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAF
RDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSALHYACLCALTL
QDLIQLD*
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mRNA from alignment at Contig_13:1477565..1481559-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5878 ID=mRNA_5878|Name=jgi.p|Trimin1|160549|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3995bp|location=Sequence derived from alignment at Contig_13:1477565..1481559- (Tribonema minus UTEX_B_3156 )
ATGTGTCATCCCATTTTTTTCCGTTCATGCAACCCTGCAGGCAACTGGTA
CCAGTGGGGTATACTGTATGGGTCACGCTCTAATCCGAAACCACAGTATC
CCAACACCCAAACTCGGCTGAAGGACGCATTCAAACGCGTCATCAAGATA
TTTACGGACAACAAGGCGCCAGTTCAGTTTCAGTTGAACATCAACGCCAA
CAATGGTGAGTGACATGATCATGTGTCAGTTGAGCTTAAGGTTAATGATC
CACGTGATTCAATGATAATCATTCAATGAATTAAGGGCACTGCCAGCACA
CTGCCGGTGGAAGGCACTTTACCGACTGCTGAACGCCAAGATACTTTCTC
AGTAAGGTACTGAAACGTGCGGTGGTTTTGTGCGTTTCAGCAACTTAAAG
TTGCTTTGAGGGTGATGATGTTTTGATATAAAAATGCGACAGCCGGCATC
CTTCAACTGGGCTAAACCTCTATGTGTAAACGAAGTAAATCAGGTGTCAC
TGAGTGCACTACCCGGATTAGTGAAACGTCTTGTCAACATTCATGGCCCG
GGATGCTGCTCTTGATCCTGGCGTCAAGAGGGAGGGACTCCTCAAAGGTC
ATGCTTTTTTAGGGTGTTTCACAGGGGGGGGTTGCTACAGTACATATGTA
AAGTGAGCATTGTCAGCATCATTCCTGTACATTGGCTGGCTGCTCCCCAG
CGGGATAAAAGTCTGCCGTCGTCGGTTTTGTCAGGGTCCCGCTTGAAGTT
CATCCATTGGCAAGTGCTGGGAATGCACCCCCCCCTCAGGAGCTGCTGCA
GAATCTGCAGGCGTTGAAAAATCCAAGATGACTGCCAGAACGGCTTTAGC
TCCCAATTATCTGCAATTCTGCGGTTCTCACCTAGCCGCTAGCAGCAGCA
CGACATGCATGCCGCACCCTGCTGAGCTTTCAAAAAGTAAGGGAGAATGC
AAGAATTATTTCACTGCAGCCAGTAAATCAAGAGGGGTCCTACATACTTA
CTGTTGCTGTGTTGGTAAAACCAACATTAAAAGGAGTGTCAGCGCCCTGA
TTTTTACAAGACGGCAGAGCTTGCAAGAACTCAAATCACTTGTGTCCTCT
ATTTCAGGAATTTTAACAAGACTCTGTTTTTTGATGCTACTACGCCTTGA
GGTCATGGTATGCCTAGCACATGTACGATTGTGCTAGCGAAGCATTCGAT
GGCTCTCCAATGAGTTGACACAGCCAGCAGTATCGTGATCAGCTGTGATT
AACTGCCAGTGCAAGGAAACCTGCGATGCCACTAATGTCACCCTGCAATG
GTAGTACCTGTTGCAGTAGCCTAAGACCATCAACAATTTTTATTGGAACT
CTGCACTTTCATTTGATAAGGCCGCAATGCAGAAGTCTAAGAAGCTGACA
TCAGCATCAAACAATGTTCGGAGATAAATGCTGGTGAACAGAGACTTCCA
TTACGCTTGCTACATGTCATGTGTCCAAGGTGCACCTTAGTTTTCGTGCA
CTTGAGACTTCAAAATCAAGCTCACTGACAGCAGTCTTGCTTCAATGTTG
TCTGCCTGCTTCGTTCCCACTTGTTTCTGCACCAAGAAGTTTGTAACTGT
GCAGCTCATAAGACATAACGTCTGTATTTGTGTCCCTTTTGCTCTGGCAG
GGTATGATGACAAGACTCCCTTTGCCACCTGGTGGCCCGGCACAGTTGGG
CTGTCATCTGTTGCCATCACCGCCTACAACCGTGCGTGCTCCACCCCAAG
CCACCAGGACTCCAAGCCGTTCAGGGACAGGTTCTCCGCTGCGTACAACC
AGGTGTGGCGGATGAACATGTACTGCTATAGTGTGCTACTTCGAGTTAGG
TCAGTGCAGTCCTTCTGATGTACCGCAGGATGTTCTAGAAACTTTGCTGC
GAAGACTGCATTTCTTTGGTCATGGCTGTGGGTAGGTGTTGCAGCTCACC
TGACAACAAAAGATTCATGGTTGTATTAGATGAGGACATGGCTGAGATTT
ACAACTTCGTGAGCTGCGGCTGCTGTATTCTTTTGAATAGCTGCACCAGT
TGCAGCTGCTGTAAGTGTTACAATAACTGGAATTTTTTGTGAACTTCATG
GACACTTTTGTCCAATGGAAGTCATGACCTGAAAGGCTAGTCTTAGTGGC
TAAGTACCAGTCCACTGATCGCAGCTGCACTATGTAGTGCTAACTGCTGC
TGCTGCTGAACTTGTCTGCGTAATCATTGCAGGTCAAGGCGTTGACACCC
CTGCCTATCTGGGTTGCTGAGACAGGTAGGTACAACGCATACTTTTAGTG
CATGACTGTGTAGCAAGGCGGTTTGAAGATGTCATACCTCAAAGTACACT
TCAAGCAGGCAATATGATCACACAAATCTCCTGAGGTAATGCGAACTCAG
CTCTTTCAGACAGGGTGGCGGCCGATTGATGGAAAAATGATGGAGCAGCA
AGCAGGCTCGTATTTGTATTGTCCTCAATTAAGCCAGACGGTGTGATGCT
TGCCAGCAGAAGTTCAGCGGTATTGCCGTCGCATTGCAGGTGCGCCTCAG
GCTTACATGGCACTCCTGATGGGATCCTCGGAGTACTTGTAAAAATTATG
TACAAGCATGAAAAAGATACATGCGACAATGAGACCAGTACTCTCTCCAC
AGTGAGATTGTTACAATGCAATGGTGTCGTATGCATCAAATGCTAGGATT
CTGTTGTAAACAACTAGGCTAGTCTAGGGGGTACATAGTGCTTACATTAG
TTGATACTTTGAAGTATTTATAGTTTACGGTATTGATCATAATTAGTGCA
TTTGCAGTTCATGAACCTTGGACAGGACCTTTGTCGATCACATCATGGTG
TTGTCCACAGGGGGCTGGACGTTAGGGGACTCATGCTGAATTGTACACTT
CTCACAGCACTAGCCATGCGGTGCAGTATTGAAAGCTGAATAGGCGCTGG
CAGCTTGCAAGCACCGGAAATTGCTCGCCAAGTCACGGGATCACAAAGTG
TACAGCTTGAGTTGTCCACAAAGACTTTAGATCAACTTGAAAACTCTACT
GGCCACCGGTCGTGCATGTCTGAATCGGCTGATATGCTGGTCTGATTGGC
TGATGTGCTGGTTGACAAACTACATATACTACACATCACGGTATGGTAGT
GCATGAGGGATGTCCCCACATATGTATGTTGCAGCGGCATGCCCCCACCA
TCACACCAAGGATGCTCCCTCTTGTCCAACGCGGTATCTCTGACTCCCCG
CGGCACTTCCTCCAAGCCAAAACCTCCTCTAAATTCACACCTGCCCAGGC
ACAACATCCTGTAAGACGGACAAGCCCAAGTGGGTTCGCGAGGCATTCCG
GGATATAGCGCAGCTGTTTCCGCAAGTGGTGCAGGTCACCTGGTTTCTGC
TGGACAAGTTTGAGGAGGGTACAACGCTCGACTGGGACATGCACGATCGC
ACTGATGTAAGCGCATATCAACAGGCTTTGCAAAAGCAGCACAGGGTTAC
GGGAAGAACAAAACATGTCTAACACAACTCAATGTTGACAGAACAGGCAA
CCAAGCCAATGCTGCCGTTATAAATTTTACTTGCAATGTAATAACAGCCG
CAGAAAGCCCAGCCTCAACTTTATCATCAGCCCTAACCAATTGGACACCA
TCTGCCCTGATAACTTTGCTGCTCGCACCCTACACAGATAGCCTCACAGA
CTCCAGGCCGACCTACCTACCCCAAATCATAACTCTCTAAGCCCTAGTTG
CTCTGACAAAACACTGACCAGGCACAACCTCCTGTAAGACGGACAAGCCC
ACGTGGGTGAAGGAGGCGTTCAGGGATATAGCTCTGCTGTTCCCACAAGT
GGTCCAGGTCACCTGGTTCCTGACCGACAAGCTGCAGGAGGGGGTGGTCA
CCGATTGGGACATGCATGATGGCACCAAAGTGAGCGCACTCCATTACGCG
TGTTTATGTGCATTAACTCTTCAAGATCTAATACAGCTTGACTGA
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Coding sequence (CDS) from alignment at Contig_13:1477565..1481559-

>mRNA_5878 ID=mRNA_5878|Name=jgi.p|Trimin1|160549|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=624bp|location=Sequence derived from alignment at Contig_13:1477565..1481559- (Tribonema minus UTEX_B_3156 )
ATGTGTCATCCCATTTTTTTCCGTTCATGCAACCCTGCAGGCAACTGGTA
CCAGTGGGGTATACTGTATGGGTCACGCTCTAATCCGAAACCACAGTATC
CCAACACCCAAACTCGGCTGAAGGACGCATTCAAACGCGTCATCAAGATA
TTTACGGACAACAAGGCGCCAGTTCAGTTTCAGTTGAACATCAACGCCAA
CAATGGGTATGATGACAAGACTCCCTTTGCCACCTGGTGGCCCGGCACAG
TTGGGCTGTCATCTGTTGCCATCACCGCCTACAACCGTGCGTGCTCCACC
CCAAGCCACCAGGACTCCAAGCCGTTCAGGGACAGGTTCTCCGCTGCGTA
CAACCAGGTCAAGGCGTTGACACCCCTGCCTATCTGGGTTGCTGAGACAG
GCACAACCTCCTGTAAGACGGACAAGCCCACGTGGGTGAAGGAGGCGTTC
AGGGATATAGCTCTGCTGTTCCCACAAGTGGTCCAGGTCACCTGGTTCCT
GACCGACAAGCTGCAGGAGGGGGTGGTCACCGATTGGGACATGCATGATG
GCACCAAAGTGAGCGCACTCCATTACGCGTGTTTATGTGCATTAACTCTT
CAAGATCTAATACAGCTTGACTGA
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