mRNA_5849 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: A0A835ZC89_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC89_9STRA) HSP 1 Score: 848 bits (2192), Expect = 3.560e-311 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 1
Query: 1 MASYTDIELSSTAQSGGVTSVRNGGKGELHLSAEEHAVRATVLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGNPNEVAMDFTLDAADPLLPVKHALWTNDQGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEFAETGLACIAAPTDEAALALTTGVSEHARIYCTNIIGHARRYSFMRARPEQIACFECCFEVFGL 1254
MASYTDIELSSTAQSGGVTSVRNGGKGELHLSAEEHAVRATVLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGNPNEVAMDFTLDAADPLLPVKHALWTNDQGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEFAETGLACIAAPTDEAALALTTGVSEHARIYCTNIIGHARRYSFMRARPEQIACFECCFEVFGL
Sbjct: 1 MASYTDIELSSTAQSGGVTSVRNGGKGELHLSAEEHAVRATVLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGNPNEVAMDFTLDAADPLLPVKHALWTNDQGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEFAETGLACIAAPTDEAALALTTGVSEHARIYCTNIIGHARRYSFMRARPEQIACFECCFEVFGL 418
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: F0YNA7_AURAN (SET domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNA7_AURAN) HSP 1 Score: 394 bits (1012), Expect = 6.100e-132 Identity = 199/363 (54.82%), Postives = 254/363 (69.97%), Query Frame = 1
Query: 133 QWLLDNGAKFPK-LEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN-PNEVAMDFTLDAADPLLPVKHALWTNDQGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEFAETGLACIAAPTDE--AALALTTGVSEHARI--YCTNIIGHARRYSFMRA 1203
QWL +NG KF +E+ SYD+E RG+HA+ DL +E ++EVPLKCLITVEMGK T VGRAV+ A+ +LDAPKH++LMLF+L DR + +FF PYYD+LP +LSNMP+FW+ +L WL+GS+++ Q+ +R+ AI ADY A+C +P F TLE+F WARM VCSRNFG++V RT+A+VPYADMLNH RPR TKWT+DN GAF IT+L I+ G Q+YDSYGQKCNHRFLLNYGF++EDN EP G PNE A+ L D L K LW D GAALA D L PFS+ R+A I V+ EKVVL H V FA T L D+ A++A ++H + Y I+ RR ++A
Sbjct: 36 QWLTENGGKFADCVELRSYDDEVRGVHATRDLETEEILVEVPLKCLITVEMGKATDVGRAVLEAELELDAPKHVFLMLFVLLDRRDSSTFFAPYYDILPSTLSNMPIFWQPDELEWLKGSYLLTQIEERKRAIKADYEAICGIWPSFIDVCTLEEFKWARMCVCSRNFGVVVNGARTSAMVPYADMLNHFRPRETKWTFDNSRGAFTITSLQKISVGSQIYDSYGQKCNHRFLLNYGFAIEDNKEPDGFCPNEAALLLQLSPHDALASRKQLLWIRD-GAALANDHLMPFSNERHARIHVKSEKVVLHHYVRFATTALELTHMRPDDFDASVARLFNSNDHRHVATYSNGILRQVRRIGRVQA 397
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: A0A6V1NVS5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVS5_HETAK) HSP 1 Score: 377 bits (968), Expect = 2.290e-124 Identity = 182/315 (57.78%), Postives = 227/315 (72.06%), Query Frame = 1
Query: 124 VLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN-PNEVAMDFTLDAADPLLPVKHALWTNDQGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEF 1065
+ E+WLLDNG+K+P+LE+ YDEE RG+HA ++ D I+E+PL CLITVEMGK+T VG+AV+AA+ DLDAPKH++LMLF+L DR DSFF+PYYD LPP+LSNMP+FW + +L WL GS++ QV DRR AI DYAA+CE P F ATL +F WARM VCSRNFG++V RT+A+VP ADMLNH RPR TKWT+DN AF ITTL GI G QVYDSYGQKCNHRFLLNYGFS+E+N EP G PNEV +F L+ +DP+ K W D G + +A SD+ N + +V++ EF
Sbjct: 3 IFEKWLLDNGSKYPQLEMREYDEEVRGVHAKEEIEEDVNIVEIPLSCLITVEMGKQTEVGQAVLAANLDLDAPKHVFLMLFMLVDRKNPDSFFKPYYDTLPPTLSNMPIFWSEEELRWLDGSYLQTQVEDRRFAIENDYAAICELVPGFAEVATLAEFKWARMCVCSRNFGLVVNGTRTSAMVPLADMLNHYRPRETKWTFDNGLQAFTITTLMGIRGGAQVYDSYGQKCNHRFLLNYGFSIENNVEPDGFCPNEVPFEFKLNPSDPIFDRKAQFWKADGGPMVKRIRVA-VSDNENTRVAYSFLRVMVATPEEF 316
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: D8LR76_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR76_ECTSI) HSP 1 Score: 372 bits (955), Expect = 3.910e-121 Identity = 201/445 (45.17%), Postives = 249/445 (55.96%), Query Frame = 1
Query: 82 ELHLSAEEHAVRATVLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLK---------------------------CLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN-PNEVAMDFTLDAADPLLPVKHALWTND-------------------------------------------------------------------------------QGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEFAETGLACIAA 1095
E++ +H + E+WLL+NGA+FP+LE+ YD E RG+HA ++ DE I+E+PLK CL+TVEMGK PVG+AV+A+ DAPKHI+LMLF+LTD R D+FFRPYYD+LP +LSNMP+FW + ++ L+GS++V QV +R AI DY +C+ YPPF ATLE+F WARM VCSRNFG+ + +RT+ALVPYADMLNH RPR TKWTYDN+ G F ITTL I G QVYDSYGQKCNHRFLLNYGF++E+N E G PNEV + F LDA DPL K W D AAL L PFS+ R+A+IQV GEKVVL H V+ AET LAC+AA
Sbjct: 64 EVNPDDPDHDAKVVAFERWLLENGARFPRLEIRRYDPEVRGVHARGEIDPDEVIVEIPLKNKKQRRKRPTGWSLQKPEKDGSASWRRCLVTVEMGKALPVGQAVLASGVSFDAPKHIFLMLFILTDMRRPDTFFRPYYDLLPTTLSNMPIFWTEEEMRLLQGSYLVTQVEERNQAIEGDYGVICDLYPPFRDVATLEEFKWARMCVCSRNFGLDINGLRTSALVPYADMLNHYRPRETKWTYDNNRGGFTITTLHRILGGAQVYDSYGQKCNHRFLLNYGFAIENNQEANGFCPNEVPLLFRLDARDPLRQKKARFWRMDGPEQRRVRLCVGDTDAVRGALSMLRVIVADAAEMGARYMYRTVKDVRFPLSVRNEVAAMERLLLLTTGALDAYPTTLEEDRAALKNGGLEPFSNRRHALIQVYGEKVVLAHYVDLAETALACLAA 508
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: A0A7S1XR30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR30_9STRA) HSP 1 Score: 367 bits (943), Expect = 3.060e-120 Identity = 196/417 (47.00%), Postives = 246/417 (58.99%), Query Frame = 1
Query: 115 RATVLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN-PNEVAMDFTLDAADPLLPVKHALWTND-------------------------------------------------------------------------------------QGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEFAETGLACIAAPTDE 1107
R V EQWLL NGA+FP+LE+ YD+E RG+HA ++P D I++PLKCLITVEMGK+T VGR ++ A DLDAPKH++LMLF+LTD + +SFF+PYYD+LP + NMP+FW++ +L WL GS+M+ Q+ADR+ AI DY A+CE P F AT E FMWARM VCSRNFG+IV +RT+A+VP+ADMLNH RPR TKWT+DN AF ITTL+ I G Q+YDSYGQKCNHRFLLNYGF++E+N E G PNEV++ F L+ ADPL KH L+ D AL LAPFS+ R+A+IQV+GEKVVLR +F T CI A + E
Sbjct: 27 RTDVFEQWLLSNGAEFPQLEIKCYDDEVRGVHAKENIPGDTICIKIPLKCLITVEMGKDTEVGRKIMDARLDLDAPKHVFLMLFMLTDMKQENSFFKPYYDILPQEMRNMPIFWDEHELRWLEGSYMLTQIADRKEAIVEDYHAICEIAPEFADIATAERFMWARMCVCSRNFGLIVNGVRTSAMVPHADMLNHYRPRETKWTFDNLLQAFTITTLTEITGGAQIYDSYGQKCNHRFLLNYGFAIENNVEADGFCPNEVSILFKLNDADPLYERKHTLFLRDGCSGGRRLRLCVARNENMSWALSLLRIIVANEEEFEALLVNQPFAYRTIKNVSRPISIENERKAMELFLNMLTAIERAFPRTLEEDAEALRHGNLAPFSNERHALIQVKGEKVVLRFFQDFTST---CIRALSGE 440
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: A0A7R9UGQ6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGQ6_9STRA) HSP 1 Score: 364 bits (934), Expect = 6.950e-119 Identity = 192/417 (46.04%), Postives = 246/417 (58.99%), Query Frame = 1
Query: 115 RATVLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN-PNEVAMDFTLDAADPLLPVKHALWTND-------------------------------------------------------------------------------------QGAALAGDTLAPFSDHRNAVIQVRGEKVVLRHIVEFAETGLACIAAPTDE 1107
+ V EQWLLDNGA+FP+LE+ YD+E RG+HA D+ +D I +PL CLITVEMGK+T +GR ++ A DLDAPKH++LMLF+LTD SFF+PYYD+LP +SNMP+FW D +L +L GS+M++Q+ADR+ AI DY A+C+ P F+ ATL+ FMWARM VCSRNFG+++ +RT+A+VP+ADMLNH RPR TKWT+DN AF I T++ I AG Q+YDSYGQKCNHRFLLNYGFS+E+N E G PNEV++ F L+ ADPL KH L+ D L LAPFS+ R+AVIQV+GEKVVLR +FA+ CI A + E
Sbjct: 28 KTEVFEQWLLDNGAEFPQLEIKCYDDEVRGVHAKEDIKSDTLCISIPLNCLITVEMGKDTEIGRKILDARLDLDAPKHVFLMLFMLTDMRNESSFFKPYYDILPQKMSNMPIFWTDDELRYLEGSYMLQQIADRKEAIIEDYDAICDIAPEFSEIATLDGFMWARMCVCSRNFGLVINGVRTSAMVPHADMLNHYRPRETKWTFDNSLQAFTIITIADITAGAQIYDSYGQKCNHRFLLNYGFSIENNVEADGFCPNEVSILFELNDADPLYERKHTLFLRDGYPGGRRLRLCVARNDNLTLALSLLRIIVANEEEFEALLLNQPYAYRTIKNITKPISVSNERKAMELFNNMLDALESAYSKPLEDDEERLRSGELAPFSNERHAVIQVKGEKVVLRFFKDFAQK---CIRALSGE 441
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: A0A7S2WKZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKZ7_9STRA) HSP 1 Score: 356 bits (914), Expect = 8.970e-117 Identity = 168/279 (60.22%), Postives = 210/279 (75.27%), Query Frame = 1
Query: 124 VLEQWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN-PNEVAMDFTLDAADPLLPVKHALWTND 957
+ E WL+ +G+KFPKL + YD+E RG+HAS ++ +E I+EVPL CLITVEMGK T VG AV+AA+ +LDAPKH++LMLF+L DR R DS F+PYYD+LP +LSNMP+FW +LA L GS+++ Q+ +R AI DY+A+C YP F + +TLE+F WARM VCSRNFGI V NIRT+A+VPYADMLNH RPR TKWT+D +F IT++ I+ G QVYDSYGQKCNHRFLLNYGFS+E+N E G PNEV FTLD ADP+ K W D
Sbjct: 43 IFEDWLVAHGSKFPKLTMQKYDDEVRGVHASEEIAPEEIIVEVPLSCLITVEMGKATDVGAAVLAANIELDAPKHVFLMLFMLVDRKREDSHFKPYYDILPETLSNMPIFWNSEELALLEGSYLLTQIEERNIAIETDYSAICGIYPDFANISTLEEFKWARMCVCSRNFGITVDNIRTSAMVPYADMLNHYRPRETKWTFDQSLRSFTITSIMHISTGAQVYDSYGQKCNHRFLLNYGFSIENNRESDGFCPNEVPFRFTLDPADPIYEQKMKFWGMD 321
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: A0A8J2SJU3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJU3_9STRA) HSP 1 Score: 350 bits (898), Expect = 2.410e-113 Identity = 171/292 (58.56%), Postives = 212/292 (72.60%), Query Frame = 1
Query: 88 HLSAEEHAVRATVLEQWLLDNGAKF-PKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN-PNEVAMDFTLDAADPLLPVKHALWTND 957
H A + V +WL +NGAKF + + Y+ + RG+HA+ DL A+E IIEVPLKCLITVEMGK T VGRAV+ A +LDAPKHI+LMLFLL DR +DSFFRPYYD+LP SLSNMP+FW+ +L WL GS+++ Q+ +R+ AI D+ A+ +A+P F TL++F WARM VCSRNFGI++ +RT+A+VPYADMLNH RPR TKWT+DN GAF IT L I +G Q+YDSYGQKCNHRFLLNYGF+VEDN E G PNEVA+ L DPL K +W D
Sbjct: 21 HSGIVSSAGKEEVFVKWLSENGAKFVDRALLRCYENDVRGVHAARDLKAEEIIIEVPLKCLITVEMGKATDVGRAVLEAGLELDAPKHIFLMLFLLLDRCNSDSFFRPYYDVLPGSLSNMPIFWKPNELTWLEGSYLLVQIEERKCAIQNDFKAIVDAWPAFKRICTLDEFSWARMCVCSRNFGIVINGVRTSAMVPYADMLNHFRPRETKWTFDNTRGAFTITALQSIPSGGQIYDSYGQKCNHRFLLNYGFAVEDNYECDGYCPNEVALLVRLAPEDPLTARKRLIWIRD 312
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: W7THN2_9STRA (Set domain containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THN2_9STRA) HSP 1 Score: 338 bits (866), Expect = 2.090e-111 Identity = 162/256 (63.28%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 133 QWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN--PNEVAM 894
+WLLDNGA FP LE+ Y+ + RG+HA L D+ ++E+PL+CLITVEMGKE+ VG+AV+A++ LDAPKHI+LMLF+LTDR SFF+PYYD+LP SLSNMP+FW D +LA+L+GS ++ Q+ +R+ AI ADYAA+ + P S ++E+F WARM VCSRNFG+ V IRTAALVPYADMLNH+RPR TKWT+DN AF ITTL IA G QVYDSYGQKCNHRFLLNYGF+VE+N E A N PNEV +
Sbjct: 27 KWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNRE-ADNFCPNEVGL 281
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Match: A0A4D9D3E6_9STRA (SET domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3E6_9STRA) HSP 1 Score: 337 bits (864), Expect = 1.160e-107 Identity = 162/256 (63.28%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 133 QWLLDNGAKFPKLEVHSYDEEFRGMHASCDLPADERIIEVPLKCLITVEMGKETPVGRAVVAADPDLDAPKHIYLMLFLLTDRLRADSFFRPYYDMLPPSLSNMPVFWEDAKLAWLRGSFMVRQVADRRAAIAADYAAVCEAYPPFTSTATLEDFMWARMIVCSRNFGIIVRNIRTAALVPYADMLNHKRPRHTKWTYDNDAGAFAITTLSGIAAGEQVYDSYGQKCNHRFLLNYGFSVEDNTEPAGN--PNEVAM 894
+WLLDNGA FP LE+ Y+ + RG+HA L D+ ++E+PL+CLITVEMGKE+ VG+AV+A++ LDAPKHI+LMLF+LTDR SFF+PYYD+LP SLSNMP+FW D +LA+L+GS ++ Q+ +R+ AI ADYAA+ + P S ++E+F WARM VCSRNFG+ V IRTAALVPYADMLNH+RPR TKWT+DN AF ITTL IA G QVYDSYGQKCNHRFLLNYGF+VE+N E A N PNEV +
Sbjct: 27 KWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLVQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNRE-ADNFCPNEVGL 281 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160443 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5849 ID=mRNA_5849|Name=jgi.p|Trimin1|160443|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1257bp|location=Sequence derived from alignment at Contig_13:1192907..1199598- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGTCCTATACTGACATTGAGCTGAGCAGCACTGCGCAGTCGGGTGGback to top protein sequence of jgi.p|Trimin1|160443 >Trimin1|160443|e_gw1.13.230.1 ID=Trimin1|160443|e_gw1.13.230.1|Name=jgi.p|Trimin1|160443|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=419bp MASYTDIELSSTAQSGGVTSVRNGGKGELHLSAEEHAVRATVLEQWLLDNback to top mRNA from alignment at Contig_13:1192907..1199598- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5849 ID=mRNA_5849|Name=jgi.p|Trimin1|160443|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6692bp|location=Sequence derived from alignment at Contig_13:1192907..1199598- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_13:1192907..1199598- >mRNA_5849 ID=mRNA_5849|Name=jgi.p|Trimin1|160443|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1257bp|location=Sequence derived from alignment at Contig_13:1192907..1199598- (Tribonema minus UTEX_B_3156 )back to top |