mRNA_5820 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347573
Unique Name	mRNA_5820
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347573 vs. uniprot
Match: A0A835Z9S7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S7_9STRA)

HSP 1 Score: 1066 bits (2756), Expect = 0.000e+0
Identity = 720/720 (100.00%), Postives = 720/720 (100.00%), Query Frame = 1

Query:    1 MPSQQQHALVPGLPVLYLSRELTGPQFKEWLTNNPSEGLRPLGEAWDPNSCASDIIDAFTTSAGNDLCDVASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSNSRDVANTVAPSAGETMIVSAAAALNTDQSAAPRSVGRCGLASARARSPSRGSAPAVRCLCVRAPVFCDASSNEEAVADYQGREVIAPVLSAIRPLNTTFRALVEGATASAPPSLPPYLRCARLEVALKQAGFYNKPPTVAPYELGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGEEPGTPEDLEKLLTNDGYLLQVTVPKGVRQNHVAYFEQDPHGICTQLGVDFRGVTGTEERIAAVPNVIETLLHRDRAVFNVYFPPAACLKLLDERKLHSTDVGYVAPTTASQVINYQRFMGTMVGRHYRNARKGMPAGRSSAKSSFDERLLAPGKPYPKPLTDDSAAIYDSNFAPGAPGTKMFGSLIGSPAAPTLPAAHIGSALDQRNGGDGGGAPKALPHERFFDAALHDGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARKRLRFQPGMPPDGAAGPTAPLDAAXXXXXXXXXXXXXEPPLQQLPWPPHDHQXXXXXXLQLGVPXXXXXXXXXXXXXXLEQPAHSVGEQQHGAAXXXXXXXXXXXXXXAEFTGVPPLLPPPSLVAXXPAPPAPGAADPGAAHTGLDMTLQQ 2160
            MPSQQQHALVPGLPVLYLSRELTGPQFKEWLTNNPSEGLRPLGEAWDPNSCASDIIDAFTTSAGNDLCDVASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSNSRDVANTVAPSAGETMIVSAAAALNTDQSAAPRSVGRCGLASARARSPSRGSAPAVRCLCVRAPVFCDASSNEEAVADYQGREVIAPVLSAIRPLNTTFRALVEGATASAPPSLPPYLRCARLEVALKQAGFYNKPPTVAPYELGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGEEPGTPEDLEKLLTNDGYLLQVTVPKGVRQNHVAYFEQDPHGICTQLGVDFRGVTGTEERIAAVPNVIETLLHRDRAVFNVYFPPAACLKLLDERKLHSTDVGYVAPTTASQVINYQRFMGTMVGRHYRNARKGMPAGRSSAKSSFDERLLAPGKPYPKPLTDDSAAIYDSNFAPGAPGTKMFGSLIGSPAAPTLPAAHIGSALDQRNGGDGGGAPKALPHERFFDAALHDGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARKRLRFQPGMPPDGAAGPTAPLDAAXXXXXXXXXXXXXEPPLQQLPWPPHDHQXXXXXXLQLGVPXXXXXXXXXXXXXXLEQPAHSVGEQQHGAAXXXXXXXXXXXXXXAEFTGVPPLLPPPSLVAXXPAPPAPGAADPGAAHTGLDMTLQQ
Sbjct:    1 MPSQQQHALVPGLPVLYLSRELTGPQFKEWLTNNPSEGLRPLGEAWDPNSCASDIIDAFTTSAGNDLCDVASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSNSRDVANTVAPSAGETMIVSAAAALNTDQSAAPRSVGRCGLASARARSPSRGSAPAVRCLCVRAPVFCDASSNEEAVADYQGREVIAPVLSAIRPLNTTFRALVEGATASAPPSLPPYLRCARLEVALKQAGFYNKPPTVAPYELGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGEEPGTPEDLEKLLTNDGYLLQVTVPKGVRQNHVAYFEQDPHGICTQLGVDFRGVTGTEERIAAVPNVIETLLHRDRAVFNVYFPPAACLKLLDERKLHSTDVGYVAPTTASQVINYQRFMGTMVGRHYRNARKGMPAGRSSAKSSFDERLLAPGKPYPKPLTDDSAAIYDSNFAPGAPGTKMFGSLIGSPAAPTLPAAHIGSALDQRNGGDGGGAPKALPHERFFDAALHDGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARKRLRFQPGMPPDGAAGPTAPLDAAXXXXXXXXXXXXXEPPLQQLPWPPHDHQXXXXXXLQLGVPXXXXXXXXXXXXXXLEQPAHSVGEQQHGAAXXXXXXXXXXXXXXAEFTGVPPLLPPPSLVAXXPAPPAPGAADPGAAHTGLDMTLQQ 720

[Close]

BLAST of jgi.p|Trimin1|347573 vs. uniprot
Match: A0A836CDZ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.140e-5
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 1

Query:   52 LSRELTGPQFKEWLTNNPSEGLRPLGEAWDPNSCASDIIDAFT 180
            L ++++G QFKEWL+ N  EGL PLG+AWD      DI++AFT
Sbjct:  121 LRQQMSGEQFKEWLSKNVDEGLHPLGKAWDTGVTLRDIVNAFT 163

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347573 vs. uniprot

BLAST of jgi.p|Trimin1|347573 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z9S7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CDZ8_9STRA	6.140e-5	53.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_13	contig	Contig_13:806084..814565 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347573\|estExt_Genemark1.C_Ctg_130074
Hectar predicted targeting category	other localisation
TranscriptId	347895
Track	FilteredModels1
ProteinId	347573

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347573	gene_5820	Tribonema minus UTEX_B_3156	gene	Contig_13 806084..814565 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347573	Trimin1\|347573\|estExt_Genemark1.C_Ctg_130074	Tribonema minus UTEX_B_3156	polypeptide	Contig_13 806084..814565 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5820_14	exon_5820_14	Tribonema minus UTEX_B_3156	exon	Contig_13 806084..806625 -
exon_5820_13	exon_5820_13	Tribonema minus UTEX_B_3156	exon	Contig_13 807208..807446 -
exon_5820_12	exon_5820_12	Tribonema minus UTEX_B_3156	exon	Contig_13 808015..808143 -
exon_5820_11	exon_5820_11	Tribonema minus UTEX_B_3156	exon	Contig_13 808701..808778 -
exon_5820_10	exon_5820_10	Tribonema minus UTEX_B_3156	exon	Contig_13 810309..810394 -
exon_5820_9	exon_5820_9	Tribonema minus UTEX_B_3156	exon	Contig_13 811506..811550 -
exon_5820_8	exon_5820_8	Tribonema minus UTEX_B_3156	exon	Contig_13 811959..812094 -
exon_5820_7	exon_5820_7	Tribonema minus UTEX_B_3156	exon	Contig_13 812662..812944 -
exon_5820_6	exon_5820_6	Tribonema minus UTEX_B_3156	exon	Contig_13 813003..813037 -
exon_5820_5	exon_5820_5	Tribonema minus UTEX_B_3156	exon	Contig_13 813429..813683 -
exon_5820_4	exon_5820_4	Tribonema minus UTEX_B_3156	exon	Contig_13 813766..813778 -
exon_5820_3	exon_5820_3	Tribonema minus UTEX_B_3156	exon	Contig_13 814114..814229 -
exon_5820_2	exon_5820_2	Tribonema minus UTEX_B_3156	exon	Contig_13 814314..814507 -
exon_5820_1	exon_5820_1	Tribonema minus UTEX_B_3156	exon	Contig_13 814554..814565 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5820	CDS_5820	Tribonema minus UTEX_B_3156	CDS	Contig_13 814554..814565 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_13:806084..814565-
coding sequence from alignment at Contig_13:806084..814565-

spliced messenger RNA

>mRNA_5820 ID=mRNA_5820|Name=jgi.p|Trimin1|347573|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2163bp|location=Sequence derived from alignment at Contig_13:806084..814565- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTTCGCAGCAGCAGCACGCGCTCGTCCCTGGGCTCCCCGTGCTGTA
CCTGAGCCGCGAGCTCACGGGGCCGCAGTTCAAGGAGTGGCTCACCAACA
ACCCCTCGGAAGGGCTGCGCCCGCTGGGGGAGGCATGGGACCCCAACTCG
TGCGCGAGCGACATCATCGACGCGTTCACCACGTCCGCCGGCAACGACCT
CTGTGATGTCGCCTCACGCAACCCCTCGGAGGGGCTGCGCCCGCTGGGGG
AGGCATGGGACCCCAACTCGTGCGCGCGTGACATCATCGACGCGTTCACA
ACGTCTGTCGGCAACGACCTCTGCGCGCGCTCCAACTCGCGCGACGTCGC
CAACACTGTCGCCCCCTCCGCCGGCGAAACGATGATCGTGAGTGCTGCAG
CAGCGCTCAACACTGATCAGTCGGCGGCGCCCCGCAGCGTAGGCAGATGC
GGCCTTGCATCCGCGCGCGCGCGCTCCCCTTCGCGCGGCAGCGCTCCGGC
CGTGCGCTGCCTTTGCGTGCGCGCGCCCGTCTTCTGCGATGCCTCTTCGA
ACGAGGAGGCAGTTGCAGATTACCAAGGCCGGGAGGTCATCGCCCCCGTG
CTGTCGGCGATACGCCCCCTCAACACCACGTTCCGCGCGCTGGTGGAGGG
CGCCACGGCGTCTGCGCCGCCGTCGCTGCCGCCGTACCTGCGCTGCGCAC
GCCTGGAGGTGGCCCTCAAGCAGGCCGGCTTCTACAACAAGCCGCCCACG
GTGGCGCCGTATGAGCTCGGCTTGGGCGCAGGCGGGGGGGCAGGGGGGGG
GGGCGCGGGCGCGCGCAGGGGGAAGGCCGCGGGCAGGGGGAAGGGGAAGG
GGAAGGGCGGCAGGGGGGAGGAGCCGGGGACGCCCGAGGACCTGGAGAAG
CTGCTCACCAACGACGGCTACCTACTTCAAGTCACCGTCCCCAAGGGCGT
GCGCCAGAACCACGTGGCGTACTTTGAGCAGGACCCGCACGGGATCTGCA
CGCAGCTCGGCGTGGACTTCCGCGGCGTCACCGGCACAGAGGAGCGGATC
GCTGCTGTACCCAACGTCATCGAAACGCTGCTGCACCGCGACCGCGCCGT
CTTCAACGTGTACTTCCCGCCGGCGGCGTGCCTCAAGCTGCTGGACGAGC
GCAAGCTGCACTCCACAGACGTGGGCTACGTGGCGCCCACGACGGCGTCC
CAGGTCATCAACTACCAGCGTTTCATGGGCACCATGGTCGGCCGACACTA
CAGGAATGCGCGCAAGGGCATGCCAGCCGGCAGGTCATCCGCCAAGAGCA
GCTTTGACGAAAGGCTGCTGGCGCCGGGGAAGCCCTACCCCAAGCCGCTC
ACGGACGACAGCGCCGCCATCTACGACTCCAACTTCGCCCCCGGCGCGCC
GGGCACCAAGATGTTCGGCAGCCTGATCGGCAGCCCCGCCGCGCCGACGC
TGCCCGCCGCGCACATCGGCAGCGCGCTGGACCAGCGCAACGGCGGCGAC
GGCGGCGGCGCGCCCAAGGCGCTGCCGCACGAGCGCTTCTTCGACGCCGC
GCTGCACGACGGCGCAGTTGCCGCCGCCGCAGCGGCTGCTGCCGACGCGG
CCGCCGCCGCCGGCGCCGAAGATGCCGACGCGCAAGCCAAGCGCGCCGCC
GCTGCCGCCGCCGCCGCTGCCGCCGCCGCCGCCGCTGCCGGCCAGGGCCC
CGCGCGCAAGCGCCTGCGCTTCCAGCCGGGCATGCCGCCAGACGGCGCCG
CCGGTCCCACCGCTCCTCTTGACGCAGCAGCAGCGGCGGCGGCAGCGGCG
GCGGCGGCGGCGGCGCCAGAGCCGCCGCTGCAGCAGCTGCCGTGGCCGCC
CCACGACCACCAGCAGCAGGCGCCGCCGCCGCTGCAGCTGGGCGTGCCGC
AGCAGCCGCCGCAGCTGCAGCTGCAGCAGCAGCAGCAGCCGTTGGAGCAG
CCAGCGCACAGCGTCGGCGAGCAGCAGCACGGCGCCGCTGCCGCTGCCGC
CGCCCCCGCCGCGCCCGCCGCCGCGCCGCCTGCAGAGTTCACGGGGGTAC
CGCCGCTGCTGCCGCCGCCGTCGCTGGTGGCGGCGGCGCCGGCACCGCCT
GCGCCGGGGGCGGCTGACCCGGGCGCCGCGCACACAGGTCTTGACATGAC
CCTGCAGCAGTAG

protein sequence of jgi.p|Trimin1|347573

>Trimin1|347573|estExt_Genemark1.C_Ctg_130074 ID=Trimin1|347573|estExt_Genemark1.C_Ctg_130074|Name=jgi.p|Trimin1|347573|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=721bp
MPSQQQHALVPGLPVLYLSRELTGPQFKEWLTNNPSEGLRPLGEAWDPNS
CASDIIDAFTTSAGNDLCDVASRNPSEGLRPLGEAWDPNSCARDIIDAFT
TSVGNDLCARSNSRDVANTVAPSAGETMIVSAAAALNTDQSAAPRSVGRC
GLASARARSPSRGSAPAVRCLCVRAPVFCDASSNEEAVADYQGREVIAPV
LSAIRPLNTTFRALVEGATASAPPSLPPYLRCARLEVALKQAGFYNKPPT
VAPYELGLGAGGGAGGGGAGARRGKAAGRGKGKGKGGRGEEPGTPEDLEK
LLTNDGYLLQVTVPKGVRQNHVAYFEQDPHGICTQLGVDFRGVTGTEERI
AAVPNVIETLLHRDRAVFNVYFPPAACLKLLDERKLHSTDVGYVAPTTAS
QVINYQRFMGTMVGRHYRNARKGMPAGRSSAKSSFDERLLAPGKPYPKPL
TDDSAAIYDSNFAPGAPGTKMFGSLIGSPAAPTLPAAHIGSALDQRNGGD
GGGAPKALPHERFFDAALHDGAVAAAAAAAADAAAAAGAEDADAQAKRAA
AAAAAAAAAAAAAGQGPARKRLRFQPGMPPDGAAGPTAPLDAAAAAAAAA
AAAAAPEPPLQQLPWPPHDHQQQAPPPLQLGVPQQPPQLQLQQQQQPLEQ
PAHSVGEQQHGAAAAAAAPAAPAAAPPAEFTGVPPLLPPPSLVAAAPAPP
APGAADPGAAHTGLDMTLQQ*

mRNA from alignment at Contig_13:806084..814565-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5820 ID=mRNA_5820|Name=jgi.p|Trimin1|347573|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8482bp|location=Sequence derived from alignment at Contig_13:806084..814565- (Tribonema minus UTEX_B_3156 )
ATGCCTTCGCAGGTCAGCCTTCACTGATCCGCGCCCTTTCATCCCGACCC
CCCTGCAGCAGCAGCACGCGCTCGTCCCTGGGCTCCCCGTGCTGTACCTG
AGCCGCGAGCTCACGGGGCCGCAGTTCAAGGAGTGGCTCACCAACAACCC
CTCGGAAGGGCTGCGCCCGCTGGGGGAGGCATGGGACCCCAACTCGTGCG
CGAGCGACATCATCGACGCGTTCACCACGTCCGCCGGCAACGACCTCTGT
GAGTGCGCGCCGCTCAGAACGTGTTGAAGTAGAGTGGTCTGTCAATCACT
TGGGGAAAATCACGCAAAATAACTTGAAAGTTGTAGTGTCGCCTCACGCA
ACCCCTCGGAGGGGCTGCGCCCGCTGGGGGAGGCATGGGACCCCAACTCG
TGCGCGCGTGACATCATCGACGCGTTCACAACGTCTGTCGGCAACGACCT
CTGTGAGTCACGTAGAAGCGTGGGCTATTCATTTGGCACACTCTGCATAG
CAAGTCTACTTCACTGTCGCATGGGACCCCAACTCGTCCTCGCGCGACAT
CCATCGACGCGTTCACGATCTACGCCGGCAACGATCTCTGTGAGTGCGCC
CGCCGCGGCAGCGCGTGCGCGCGTTCAGATCATGCGGGACTGCTGGTTTC
TCATCCAACGCATCCTGCGCAACATGTATCTTTTAGTGGCCCCTCTGACC
CCACCGCGAGCTCGCGCTCAAATCTTACAGCGCTCACCACGCCTGCCGGC
CATGTCCGCTGTGAGTGCGCGCCGCGCGGCGGCGCAGGCGCGCGCTCCAA
GTCACCTGGAATGGCTGGTCTTTCATTCAGCGAACACTACTGAAGCGTTC
CAGTTTGGTGTCTCCTCTGACCCCACCATCAGCTCGCGCGACGTCGCCAA
CACTGTCGCCCCCTCCGCCGGCGAAACGATGATCGTGAGTGCTGCAGCAG
CGCTCAACACTGATCAGTCGGCGGCGCCCCGCAGCGTAGGCAGATGCGGC
CTTGCATCCGCGCGCGCGCGCTCCCCTTCGCGCGGCAGCGCTCCGGCCGT
GCGCTGCCTTTGCGTGCGCGCGCCCGTCTTCTGCGATGCCTCTTCGAACG
AGGAGGCAGTTGCAGATTACCAAGGCCGGGAGGTCATGTCCAGCCTCAGA
CCTGAACCGCAGGGCTTCGTGGCACTGAACTGACTGATGGCGCAACAGCG
CACAGTGCTGCTGCTCGTCTTTGCCGCCCCTGCCGTCCGTCGGTCGCCGC
GCTCCTCTTCTTCAATCCTGACGCCCAATGCGTCCGCGCTTCAGCGAGGG
GGGGGGAGCGCTGGACTTGGCGATGCAGCAGCGCTCTTGCCATGGCAGCA
GCAGCAGCGCTCAGCCATGGCGCTGACGCGGCCGTCGGGCGCCGCCCGCC
GTCGCGTGCCGAACTGCTCACACGCACAGTAGGCAAAAGTAATAAAGGCA
CACCAACTGTTCAGCTGTGTGTAGCGTTTCGGGTCTGCAGCAAAACACGG
CCGGCCCTCCCCCCCCCCCGGCTGCGAGCGCCCCCGTGCTGTCGGCGATA
CGCCCCCTCAACAGTCCCCCCCCCCCCCCCCCCCCCACCCTCCCGCCTGC
GCCGCCGTCGTCGTCGCGCAGCCACGTTCCGCGCGCTGGTGGAGGGCGCC
ACGGCGTCTGCGCCGCCGTCGCTGCCGCCGTACCTGCGCTGCGCACGCCT
GGAGGTGGCCCTCAAGCAGGCCGGCTTCTACAACAAGCCGCCCACGGTGG
CGCCGTATGAGCTCGGCTTGGGCGCAGGCGGGGGGGCAGGGGGGGGGGGC
GCGGGCGCGCGCAGGGGGAAGGCCGCGGGCAGGGGGAAGGGGAAGGGGAA
GGGCGGCAGGGGGGAGGAGCCGGGGACGCCCGAGGACCTGGAGAAGCTGC
TCACGTGAGTACTTCAACTTGAGGTTTGGCAGGTTAGCCTGAATGACATG
TGTGCGCGAACTCTGCGGGGTCGATTGGCTTTCAAGGAAGGACTTCAAGT
TGAGGTTTTGTATCTGTCTCTTCCAGCCCCTGCAGGTGGTTTGTGTGCAA
CACAATTGATTCATGTGAGTTTCTTCTTGAACAAGACACTTGTGAGTACC
TGATATTGAACATTGTTTCCAGATGATCTGTGTGAAAGTCTATTGAAATC
AAATGCGGAAGTGATGCTCTTGCAAACGTTCACATCTGCCACTGGTGTTA
GCGGGCATCGCTCCACTTCCACTGCGTTGTTGAGCGCTGCCAACTTCAAC
TCACCGTGCGCAAATCGCGCGCCAGCAGCACCACTCTGAAAATTGATCCC
CAAGCAGGAAACTGCACGTACGCCGAAGCACGTCTGCCCGGTGACCACCT
GATACCCTCAGGCTATTTCCCCCGTGGTGTTCTCCACTCATGCTATTTGC
AGCCTCTCGTTTCATGGTACATGTTCTCCCACTATTGAAGCTGTTTGCGC
ATTTCGGCTCCGTTCGCGCAGCAACGACGGCTACCTACTTCAAGTCACCG
TCCCCAAGGGCGTGCGCCAGAACCACGTGGCGTACTTTGAGCAGGACCCG
CACGGGATCTGCACGCAGCTCGGCGTGGACTTCCGCGGCGTCACCGGCAC
AGAGGAGGTATGTATGTATCAGCACCCATGTACCTACTTCTACATGCCCT
CCGCTTCATGGACACGGTTCAGAAGATCGTAGAGCTCCAGGTGACAGGGT
GCGGTCAGCCGTCATGCTGAATGCCTTCCGCCAGTAAACGTGGTCGCCGC
TGCTGCGGCGATCCATACCCTGACGGCCGAAACGCCGCGTGTATGTTTGG
CGGAACAGAGCCCTCGCGCGGCGTTGACGGACCCCTGGACCGATTGCACC
GCAGTTCGCGTCCGTGTGAGGTGGCGGCGCGCGGCGAGGGGCGCAGCGGA
GCGCTGCCGCGCCGTGTCCGCAGAGCGGAACCGCTGCCGCACTGTCTCAG
CGGAGCGCTATTGGATGCACCATGTCAGCGCACCGCGTGAGCACAGCGCT
GCCGCACTGTCTCAGCGGATCGCTGCTGTACCCAACGTCATCGAAACGCT
GCTGCACCGCGTGAGCTCAGCGCTGCCGCGCGCCGTCTCAGAGGAGGGCT
GGCGCAAAGTGTCAGGCGGAGCGCTGTAAACTGTCAGCAGAGCGCTGCTG
CCCCGTGTCAGCGGAGCGCTGCTGCATCATCCTCAGCGCTCAGCCGCGCC
GCGTCGCTTAGGGCTAACCCCAACCCTAACCCTAACCGCGTACGACAAGA
GACACACTTTTGGGCAGCGCGCGTCGGGCTGGATGTGCAGACTTGACTGT
CCGCTGACTCGAGCCTCAATTTCAGCGTGCTCGGGGGCGTGCCGCAGATC
AAATGATGGAACGGAGTCTCCGTCGATGCTTGACTTTGAGCCACTTTGAC
GGGCCTCCGGTTCTGATGCAGCTGAGCGGCGCTTCTGTTGCCATCTGATG
GTTGGAGCGCTGCTGCTGTTGCCATCTGCCGAGCGCTGCTGCCGTTTCCG
TCTGAGCTCTGCTGATGCGGCGAGGTGCTGCTGCTGCAGTGCGCCAGTGC
CGTCGCCTCAAGCGCTGCAACAACCGTTTGAGCGCTGCTGCTGCTGCTGC
TGTCGTGTTCTGAGTGCTGGTGCTGTGTGGCGAACAGCTGAGCCAATGCT
GCTAAATGCCGTATGAGCGCTGCTGCTGCTGCTTATATCCGCGCGCCGCT
GCTGCTGCAGCTGCTGCATGGTGTCCTGAGCGCTGCTGCTGTGTGCGCGG
CATAAAAGCTGAGCGCCGCTGCTGCTGCTGCTGCTCAGTCTGAGCGCTGC
TGTTTGTTTCCGAGCACCGCAATGCGGTCGAGCGCTGCTGCTGTTGCCGG
CTGAGCGCTGCTGTCGTGTTCCGAGCAATGCTGCTGTTTCCTTTCGAGCG
CTGCTGCTACACGGCCGTCTGAGCGCTGCTACCGCTGCTGCCAAGCGCTG
CTGCTGTTGTGGAAACGAATCAAAAGATCGTAGAGCTCTAGGTGACAAAG
GATGGTTAGCCGCAAGTGCCTTCCACCAATAACCGTGGTCGCCGCTGCTG
CAGTCATTGGCCACGAGTCATGCAGTGCCTTCATATCCACAGGTCAAAAG
GCTTCTGTGTGCGAGCTTTTTAGCGTTGTATTCTGAGCGCTGCTGCTGCT
GCCGTCTGAGCGCTGCCGCAGGACCGCGCCGTCTTCAACGTGTACTTCCC
GCCGGCGGCGTGCCTCAAGCTGCTGGACGAGCGCAAGCTGCACTCCACAG
ACGTGGGGTAAGGCATCTCTACTTCGAGTTGAAGTACTCTGAAACAGTTC
AAGAAGTCAATTCTCAAGGCGTTTCTATGAAGTGCACACAATCATGTGCA
AGCGCAAGACGCACTCCACGGACGTGGGGTAAGGCGTCTCTACTTCAAGT
TGAAGTATACAGTTCGAGAAGTCAAATTTCAACGTGTGTCTATGCTCGTT
ACATGAAGTGCACACCAGCATGTGCATATGCAAGACGCACTCCGCGGATG
TGGGGTAAGGCATCTTTACTTCAAGTTAAAGTTATAGTTGGAGAAGCGTA
TAGTCCATTCAAGTATGCTTGTTGCATGAAGTGCACAAAATCAGTGCATA
CGCAAAACGCACTTGTCGGACGTGGGATAAGGCGTTGCTACTGTGTAGTT
GACTATGTAGCAGTATACTTCTATTACGTTTAGACTACACTCATTTTGGG
AAGTGCACGCAGTCATGTGCGTATGCGCGACGCACTGCGTGGATGCAAGC
CGCACTCCTCGTGGGGTAAGGCAACGTTACTACATAGAGTGTCAGTACTT
ACAAAGGGTGTGAGCGAGGCACTGTCGGTGTTGTCGTACAAAGTATGAAG
TTACAATGTATGCTGATATAATGAAGACGTGCACACATGTGCGGCGTGCA
CCACGTATGTCAATGACCTCGCAGCATGCTGCTCTGGATGTGCGCACGCA
ATTATGCATGCGTGCACAACGCTCACCGCTGATGTGCGGCGAGGCGTAAC
ACCGCTACATGACGTAGGTAGTCCTGAGTAGCACCTCACTGTAACCAGAC
AGCGCCCCAGTGTGCTTGTGGGTCCGACAACAGGCAGAATTTGTTTTTCT
CACGCGGACTCACTGCTGCACAGAACCAGGCAGGCATGCGTCAGATCACC
AAGATCCAGAGTGCGCAGTGGCATGACGCCACGAGCGCCCGAAGCCGGTG
GACTGACGCAAATACAGCTGCGGAGCACCCGAAGGACTCCGTTCGGTCAA
GTGCGCACATTGATTGCCGCACACGCACTCTGAAGTTCCACGTCTCGCGC
CGCGCCGCGCCGCATACAACTCTCACGGCGGTCATCTGACTGCGCGCAAA
TCACCACGAGCGTCTGAAGCGGAACGATGCAACATGCTCGCGGAGCCGTT
CGGTCAAGTGCATGTGACCGCCGGCTCATGTGCTCTACAGTCGCTGCAGC
AGAATTTTGCTGTCAGAAGGTTTTCGAGTGCTTCTTTACGCAAGCCCTTG
TCCACTGGGCCAAATGCTTGCGTACTCCGAAGCGCCACGCGTCGCGCCGT
GCCGCGTAGACTCTTGCAGCGGCCGTCCGACTGCGCGCAATCGCCGGTGC
ATGCGCGCTGCTGCACACATGCTTCAAAACGCATGTTTGCGCCGCATCGC
ATCGACTCTGACGGCGGTCGCTGACGCCGAGTACTTGTGTACTCCGGAGC
GCACATGTGCTAGCCCCGCGCCGCCGCACAGACTCTTGCGGTGGTCGTTT
GATGCCCGTCGCGCGCTGCGCTCTCGTGTGTGTGCAGCTACGTGGCGCCC
ACGACGGCGTCCCAGGTCATCAACTACCAGCGTTTCATGGGCACCATGGT
CGGCCGACACTACAGGTGAGGGCGCGCAAGCGCATTGTTGCATGCTCTAG
TCACTACAGGTGAGCGCGCAGATGTCCCTTCCGGCGCTGCTGGACCGTGT
GAGCGCGGTGCCGCTTTGCTAGCGATTGCAGCGCTGCCACACCATGCTGA
GCGCTGCGACATGTCGCAGCTCATCCACTGCCAGCGCTTCATGGGCACCA
TGGTCTGCCCGCCACTACAGGTGAGGCTGCGCAAGTGCATGCCGGCGTAC
GCCAGTTGGTAAATCACACAACACCTCACGACAAAAGGGTCGGCGACCGG
GTGATAACATGTGCAAGATTGAAGGTCGGACACGTGAGCACACATGCTGT
AAAAATGTGGTGCCCACCATTACAAGGACTGGCGCACCCATCAGCAGTAT
GGACGGGGGGTGTATTGGCCCGTAGCAGATGTCGATCGTGGCAGTACAGG
CAGGGGGTGGAGGGTACTTCGCGCCCGCGCGTGTGTGTGCAGGGGGGGGG
GGGGGTACGCCTTTCCAGCCACCAAATACCCAACAAGACATGTTTAACCT
TTTCTGCGCTGACTCTCCTCAGGAATGCGCGCAAGGGCATGCCAGCCGGC
AGGTCATCCGCCAAGAGCAGCTTTGACGAAAGGCTGCTGGCGCCGGGGAA
GCCCTACCCCAAGCCGCTCACGGACGACAGCGCCGCCATCTACGACTCCA
AGTGCGTAACGCATGTGCATATATACACACAAAACACATGCTTCGAAGTA
TATGCTTCTACTTCTATATAAGCTGCTGTGTGCATGCATGTATGCATGGA
CGACAACGCTGCCATCTACGACTTTAAGTGCGTAACGTATACGGCATACT
ACATGTACGCATACGTGCACACGCACATGTATACTTTGAAGTATATATAT
ATGTATGAGCTGCTGTGTGCATGTATGTATGCACGGACGACAGCGCTGCC
ATCTACGACTCCAAGCGCGTAACGCATGTATATATACACACACAAACGCA
CATATATTCAGTAGCTGCTGTGTGCATGTGTGCATGCACGGACGACAGCG
CCGCCACACTACGACTCCAAGTGCGTACCACCCCCCCTCCCCCCAGCTTG
ATAACTGTCCACATCGGCACTCAGCGCCTACAGCGCGCCTTCCACACAAT
ACACGCTTGCGCTCCCAGCCTGCACTTCCTTCACGACCTCGCTCGCCGCC
ACCGTCGCGCCCTCTGCCGAGTGTGCCCCAAAATCCAACGTCAGCCCCGA
CACCCCCCACCGCGCGCAGCTTCGCCCCCGGCGCGCCGGGCACCAAGATG
TTCGGCAGCCTGATCGGCAGCCCCGCCGCGCCGACGCTGCCCGCCGCGCA
CATCGGCAGCGCGCTGGACCAGCGCAACGGCGGCGACGGCGGCGGCGCGC
CCAAGGCGCTGCCGCACGAGCGCTTCTTCGACGCCGCGCTGCACGACGGC
GCAGTTGCCGCCGCCGCAGCGGCTGCTGCCGACGCGGCCGCCGCCGCCGG
CGCCGAAGGTGAGCGATCGCGCGCGCCTGCGCTCCCTCCGCGCGCCCTTT
CTGTCTGCTCGTCCGTGCTGCGCGCTGCGGCGGGAGTGTCGCGTGGTGTT
TGCTGCCGTTGGGAAAGCATGTGCGCAGGCTCAGATGCTCAGGGCGACCA
GCCCTGATGCAGCCGATGTTGAGCAGCTGCATTTTGAGGAGGAGGAAGAT
GTGCATTGGGGAGCGTGACGCGCCGCCTCAGCTGCGCGAGCGCGCCTAGT
GGGCGCCGCGGCCGCGCGTCGCCGTCACTGCTGCTGCGGCGCACGTCGAT
CAAAGCGCGCCGCGCAGCACTGCACTTGCTGCGGTGCCACAAGTCCCGTA
AGCGCCGCGCTGTGCGTAACGTCAAGCGGGCAGCTTTGGTCTCATGTTCT
GCAACGACGGTCGAATGAAATCCGCCACTCACTGTCACCAGCACGTCAAG
ACCGACCAGTCGATAACACAAAAAACTTGCACGCGCGAATCGGATGCCTC
TTTGTCTGCAGGCAGCAATTGAATCGCCCGCACACATGCCGGCCGCGCTG
ACGCTTTCATCACCACGTGCATTCCTCGCCGTTGATTCAGATGCCGACGC
GCAAGCCAAGCGCGCCGCCGCTGCCGCCGCCGCCGCTGCCGCCGCCGCCG
CCGCTGCCGGCCAGGGCCCCGCGCGCAAGCGCCTGCGCTTCCAGCCGGGC
ATGCCGCCAGACGGCGCCGCCGGTCCCACCGCTCCTCTTGACGCAGCAGC
AGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGCCAGAGCCGCCGCTGC
AGCAGCTGCCGTGGCCGCCCCACGACCACCAGCAGCAGGCGCCGCCGCCG
CTGCAGCTGGGCGTGCCGCAGCAGCCGCCGCAGCTGCAGCTGCAGCAGCA
GCAGCAGCCGTTGGAGCAGCCAGCGCACAGCGTCGGCGAGCAGCAGCACG
GCGCCGCTGCCGCTGCCGCCGCCCCCGCCGCGCCCGCCGCCGCGCCGCCT
GCAGAGTTCACGGGGGTACCGCCGCTGCTGCCGCCGCCGTCGCTGGTGGC
GGCGGCGCCGGCACCGCCTGCGCCGGGGGCGGCTGACCCGGGCGCCGCGC
ACACAGGTCTTGACATGACCCTGCAGCAGTAG

Coding sequence (CDS) from alignment at Contig_13:806084..814565-

>mRNA_5820 ID=mRNA_5820|Name=jgi.p|Trimin1|347573|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2163bp|location=Sequence derived from alignment at Contig_13:806084..814565- (Tribonema minus UTEX_B_3156 )
ATGCCTTCGCAGCAGCAGCACGCGCTCGTCCCTGGGCTCCCCGTGCTGTA
CCTGAGCCGCGAGCTCACGGGGCCGCAGTTCAAGGAGTGGCTCACCAACA
ACCCCTCGGAAGGGCTGCGCCCGCTGGGGGAGGCATGGGACCCCAACTCG
TGCGCGAGCGACATCATCGACGCGTTCACCACGTCCGCCGGCAACGACCT
CTGTGATGTCGCCTCACGCAACCCCTCGGAGGGGCTGCGCCCGCTGGGGG
AGGCATGGGACCCCAACTCGTGCGCGCGTGACATCATCGACGCGTTCACA
ACGTCTGTCGGCAACGACCTCTGCGCGCGCTCCAACTCGCGCGACGTCGC
CAACACTGTCGCCCCCTCCGCCGGCGAAACGATGATCGTGAGTGCTGCAG
CAGCGCTCAACACTGATCAGTCGGCGGCGCCCCGCAGCGTAGGCAGATGC
GGCCTTGCATCCGCGCGCGCGCGCTCCCCTTCGCGCGGCAGCGCTCCGGC
CGTGCGCTGCCTTTGCGTGCGCGCGCCCGTCTTCTGCGATGCCTCTTCGA
ACGAGGAGGCAGTTGCAGATTACCAAGGCCGGGAGGTCATCGCCCCCGTG
CTGTCGGCGATACGCCCCCTCAACACCACGTTCCGCGCGCTGGTGGAGGG
CGCCACGGCGTCTGCGCCGCCGTCGCTGCCGCCGTACCTGCGCTGCGCAC
GCCTGGAGGTGGCCCTCAAGCAGGCCGGCTTCTACAACAAGCCGCCCACG
GTGGCGCCGTATGAGCTCGGCTTGGGCGCAGGCGGGGGGGCAGGGGGGGG
GGGCGCGGGCGCGCGCAGGGGGAAGGCCGCGGGCAGGGGGAAGGGGAAGG
GGAAGGGCGGCAGGGGGGAGGAGCCGGGGACGCCCGAGGACCTGGAGAAG
CTGCTCACCAACGACGGCTACCTACTTCAAGTCACCGTCCCCAAGGGCGT
GCGCCAGAACCACGTGGCGTACTTTGAGCAGGACCCGCACGGGATCTGCA
CGCAGCTCGGCGTGGACTTCCGCGGCGTCACCGGCACAGAGGAGCGGATC
GCTGCTGTACCCAACGTCATCGAAACGCTGCTGCACCGCGACCGCGCCGT
CTTCAACGTGTACTTCCCGCCGGCGGCGTGCCTCAAGCTGCTGGACGAGC
GCAAGCTGCACTCCACAGACGTGGGCTACGTGGCGCCCACGACGGCGTCC
CAGGTCATCAACTACCAGCGTTTCATGGGCACCATGGTCGGCCGACACTA
CAGGAATGCGCGCAAGGGCATGCCAGCCGGCAGGTCATCCGCCAAGAGCA
GCTTTGACGAAAGGCTGCTGGCGCCGGGGAAGCCCTACCCCAAGCCGCTC
ACGGACGACAGCGCCGCCATCTACGACTCCAACTTCGCCCCCGGCGCGCC
GGGCACCAAGATGTTCGGCAGCCTGATCGGCAGCCCCGCCGCGCCGACGC
TGCCCGCCGCGCACATCGGCAGCGCGCTGGACCAGCGCAACGGCGGCGAC
GGCGGCGGCGCGCCCAAGGCGCTGCCGCACGAGCGCTTCTTCGACGCCGC
GCTGCACGACGGCGCAGTTGCCGCCGCCGCAGCGGCTGCTGCCGACGCGG
CCGCCGCCGCCGGCGCCGAAGATGCCGACGCGCAAGCCAAGCGCGCCGCC
GCTGCCGCCGCCGCCGCTGCCGCCGCCGCCGCCGCTGCCGGCCAGGGCCC
CGCGCGCAAGCGCCTGCGCTTCCAGCCGGGCATGCCGCCAGACGGCGCCG
CCGGTCCCACCGCTCCTCTTGACGCAGCAGCAGCGGCGGCGGCAGCGGCG
GCGGCGGCGGCGGCGCCAGAGCCGCCGCTGCAGCAGCTGCCGTGGCCGCC
CCACGACCACCAGCAGCAGGCGCCGCCGCCGCTGCAGCTGGGCGTGCCGC
AGCAGCCGCCGCAGCTGCAGCTGCAGCAGCAGCAGCAGCCGTTGGAGCAG
CCAGCGCACAGCGTCGGCGAGCAGCAGCACGGCGCCGCTGCCGCTGCCGC
CGCCCCCGCCGCGCCCGCCGCCGCGCCGCCTGCAGAGTTCACGGGGGTAC
CGCCGCTGCTGCCGCCGCCGTCGCTGGTGGCGGCGGCGCCGGCACCGCCT
GCGCCGGGGGCGGCTGACCCGGGCGCCGCGCACACAGGTCTTGACATGAC
CCTGCAGCAGTAG