mRNA_5708 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349417
Unique Name	mRNA_5708
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349417 vs. uniprot
Match: A0A836CEC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEC9_9STRA)

HSP 1 Score: 701 bits (1808), Expect = 5.350e-247
Identity = 592/592 (100.00%), Postives = 592/592 (100.00%), Query Frame = 1

Query:    1 MDRKSSKKKSXXXXXXXXXXXXXXATIESDRPPAVKSKEQSTHKKKDRADEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKDKTTSKQKPADKVEKTASKPSKEGHKKGDGAVSAAKSKDSGAASGPPATAAKGXXXXXXXXXXXXXXXXXXXXXXXXAKVRASAEGDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSRQGSMVTTLRSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAXXXXXXXXXXXXXXXXADTARKPGAAXXXXXXXXPTPPADGFPRSEIAPKRSDPCPHCGKHYERLSMHRCKLAPENAASKADKGXXXXXXXXXXXXXXXXXXXXXXKGKVVVANGXXXXXXXXXXXGKRPREESHDGDEDSAIANGGDVAKPAAKHYKTMGEYLGFVKEVMADGQKEFGLDMSVQVFKQRTVLCAQMHTPGWLEATASASLPTARGRKATSEKKRMSKSRGEGPDGGVDAALESMEGLPHQQGSEDDHQLVFMEPGEGKTGVCKWRRCNYCQPNKFPGYQGRTPLGCKGCDFFFHPECYRDYHNSNGIAAEPVPGTV 1776
            MDRKSSKKKSXXXXXXXXXXXXXXATIESDRPPAVKSKEQSTHKKKDRADEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKDKTTSKQKPADKVEKTASKPSKEGHKKGDGAVSAAKSKDSGAASGPPATAAKGXXXXXXXXXXXXXXXXXXXXXXXXAKVRASAEGDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSRQGSMVTTLRSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAXXXXXXXXXXXXXXXXADTARKPGAAXXXXXXXXPTPPADGFPRSEIAPKRSDPCPHCGKHYERLSMHRCKLAPENAASKADKGXXXXXXXXXXXXXXXXXXXXXXKGKVVVANGXXXXXXXXXXXGKRPREESHDGDEDSAIANGGDVAKPAAKHYKTMGEYLGFVKEVMADGQKEFGLDMSVQVFKQRTVLCAQMHTPGWLEATASASLPTARGRKATSEKKRMSKSRGEGPDGGVDAALESMEGLPHQQGSEDDHQLVFMEPGEGKTGVCKWRRCNYCQPNKFPGYQGRTPLGCKGCDFFFHPECYRDYHNSNGIAAEPVPGTV
Sbjct:    1 MDRKSSKKKSXXXXXXXXXXXXXXATIESDRPPAVKSKEQSTHKKKDRADEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKDKTTSKQKPADKVEKTASKPSKEGHKKGDGAVSAAKSKDSGAASGPPATAAKGXXXXXXXXXXXXXXXXXXXXXXXXAKVRASAEGDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSRQGSMVTTLRSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAXXXXXXXXXXXXXXXXADTARKPGAAXXXXXXXXPTPPADGFPRSEIAPKRSDPCPHCGKHYERLSMHRCKLAPENAASKADKGXXXXXXXXXXXXXXXXXXXXXXKGKVVVANGXXXXXXXXXXXGKRPREESHDGDEDSAIANGGDVAKPAAKHYKTMGEYLGFVKEVMADGQKEFGLDMSVQVFKQRTVLCAQMHTPGWLEATASASLPTARGRKATSEKKRMSKSRGEGPDGGVDAALESMEGLPHQQGSEDDHQLVFMEPGEGKTGVCKWRRCNYCQPNKFPGYQGRTPLGCKGCDFFFHPECYRDYHNSNGIAAEPVPGTV 592

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349417 vs. uniprot

BLAST of jgi.p|Trimin1|349417 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CEC9_9STRA	5.350e-247	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_42	contig	Contig_42:783264..790038 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349417\|estExt_Genemark1.C_Ctg_420104
Hectar predicted targeting category	other localisation
TranscriptId	349739
Track	FilteredModels1
ProteinId	349417

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349417	gene_5708	Tribonema minus UTEX_B_3156	gene	Contig_42 783264..790038 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349417	Trimin1\|349417\|estExt_Genemark1.C_Ctg_420104	Tribonema minus UTEX_B_3156	polypeptide	Contig_42 783264..790038 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5708_12	exon_5708_12	Tribonema minus UTEX_B_3156	exon	Contig_42 783264..783396 -
exon_5708_11	exon_5708_11	Tribonema minus UTEX_B_3156	exon	Contig_42 783896..783990 -
exon_5708_10	exon_5708_10	Tribonema minus UTEX_B_3156	exon	Contig_42 784700..784786 -
exon_5708_9	exon_5708_9	Tribonema minus UTEX_B_3156	exon	Contig_42 785095..785154 -
exon_5708_8	exon_5708_8	Tribonema minus UTEX_B_3156	exon	Contig_42 785547..785600 -
exon_5708_7	exon_5708_7	Tribonema minus UTEX_B_3156	exon	Contig_42 786071..786183 -
exon_5708_6	exon_5708_6	Tribonema minus UTEX_B_3156	exon	Contig_42 786594..786636 -
exon_5708_5	exon_5708_5	Tribonema minus UTEX_B_3156	exon	Contig_42 787246..787623 -
exon_5708_4	exon_5708_4	Tribonema minus UTEX_B_3156	exon	Contig_42 788387..788534 -
exon_5708_3	exon_5708_3	Tribonema minus UTEX_B_3156	exon	Contig_42 788883..789372 -
exon_5708_2	exon_5708_2	Tribonema minus UTEX_B_3156	exon	Contig_42 789735..789820 -
exon_5708_1	exon_5708_1	Tribonema minus UTEX_B_3156	exon	Contig_42 789947..790038 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5708	CDS_5708	Tribonema minus UTEX_B_3156	CDS	Contig_42 789947..790038 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_42:783264..790038-
coding sequence from alignment at Contig_42:783264..790038-

spliced messenger RNA

>mRNA_5708 ID=mRNA_5708|Name=jgi.p|Trimin1|349417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1779bp|location=Sequence derived from alignment at Contig_42:783264..790038- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGGAAATCGAGCAAGAAGAAATCTAAACCAGACCCTGCGCCAAA
GAGCGCCGACAGCGACTCCGATGCCACAATCGAGTCTGACAGGCCACCAG
CGGTCAAGAGCAAGGAACAATCTACTCACAAGAAGAAGGATCGCGCTGAC
GAGCCGTCTCAACCTGATGCTGCTAGTGCACTGAAACCCAAGAAGGACAA
GAAACAAAAAGACGGTGGAAGCAAGGCAGCCGCAGCGGCCACACCCGTCA
ACCCCTCTAAGCCAGTGAAGGACAAGACAACTTCCAAACAGAAGCCTGCC
GACAAGGTTGAGAAAACTGCCTCCAAGCCGTCTAAGGAGGGCCACAAGAA
AGGCGATGGCGCCGTGAGCGCGGCTAAGAGCAAAGACAGCGGCGCTGCAT
CTGGGCCCCCAGCCACCGCTGCGAAGGGCAGCAAGGAATCGTCAAAAGCT
AAGAGTGGCACCGCTGGCAAGGCAGCAGGAGCTGCTGCTGCTAGCGCGCC
TGCTAAGGTTCGTGCATCAGCTGAGGGTGATAAGAAGAAGAAGGCCAAGA
AGGCATCAAGCGGATCCAGCGACGCCAGCGACGGCAACAGCAGCAGCAGC
AGCAGCGACGGCAGCAGCAGCGGCGGCAGCAGCGACAGCAGGCAAGGCTC
AATGGTTACTACACTGCGCTCTGACTCGGAGTCGGACTCTGGCAGTAGCA
GCAGCGGCAGTGGCAGCGGCAGCGGCTCGAGCAGCTCTGGCAGCGGCAGC
GAATCGGAGGGCTCTAGCACGGATGATGAGAAGGACACCAAGGCAGCAGA
GAAACCAAAGAAGAAGAAACCCGCAGCAGCGGCCGCTGCAGCTGCCGACA
CCGCCCGCAAGCCTGGCGCCGCTAAGCCCGCGGCAGGGACGCCAGCGCCC
ACACCACCGGCCGATGGTTTTCCCCGCAGCGAGATTGCGCCCAAGCGCAG
CGACCCCTGCCCGCACTGCGGCAAGCACTACGAGCGCCTCTCCATGCACC
GCTGCAAGCTGGCGCCGGAGAACGCGGCCAGCAAGGCTGACAAGGGGGAG
AAGAAGAAGGAGGAATGCCCCGCGTGCGGCGGCACGTTTGAGCGCATCGC
CTCGCACAGGTGCAAGGGGAAGGTTGTGGTTGCGAATGGCGGCGGCGGCG
GCGACGGCGGCGCAGAGGCCGGCGGGAAGCGCCCGCGGGAGGAGTCCCAC
GATGGGGATGAAGACAGTGCAATTGCGAACGGCGGAGATGTAGCAAAGCC
TGCGGCCAAGCACTACAAGACCATGGGCGAGTACCTGGGGTTTGTCAAGG
AGGTCATGGCGGATGGGCAGAAGGAGTTTGGCCTCGACATGTCTGTACAG
GTGTTCAAGCAGAGGACCGTTCTCTGCGCACAGATGCACACCCCTGGCTG
GCTGGAGGCCACTGCCAGCGCCAGCCTGCCGACTGCACGTGGGAGAAAGG
CTACATCTGAGAAGAAGCGCATGTCCAAGAGCCGCGGCGAAGGCCCTGAT
GGCGGCGTGGACGCAGCGCTGGAGTCCATGGAGGGCCTTCCTCACCAACA
GGGCAGTGAGGACGACCACCAGCTGGTATTCATGGAGCCGGGCGAGGGCA
AGACTGGTGTGTGCAAGTGGAGACGCTGCAACTACTGCCAGCCAAACAAA
TTCCCTGGCTACCAGGGCAGGACGCCCCTGGGCTGCAAGGGCTGTGATTT
CTTCTTTCACCCAGAGTGCTACAGGGACTACCACAACAGCAACGGCATAG
CTGCAGAGCCTGTGCCTGGCACCGTCTAG

protein sequence of jgi.p|Trimin1|349417

>Trimin1|349417|estExt_Genemark1.C_Ctg_420104 ID=Trimin1|349417|estExt_Genemark1.C_Ctg_420104|Name=jgi.p|Trimin1|349417|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=593bp
MDRKSSKKKSKPDPAPKSADSDSDATIESDRPPAVKSKEQSTHKKKDRAD
EPSQPDAASALKPKKDKKQKDGGSKAAAAATPVNPSKPVKDKTTSKQKPA
DKVEKTASKPSKEGHKKGDGAVSAAKSKDSGAASGPPATAAKGSKESSKA
KSGTAGKAAGAAAASAPAKVRASAEGDKKKKAKKASSGSSDASDGNSSSS
SSDGSSSGGSSDSRQGSMVTTLRSDSESDSGSSSSGSGSGSGSSSSGSGS
ESEGSSTDDEKDTKAAEKPKKKKPAAAAAAAADTARKPGAAKPAAGTPAP
TPPADGFPRSEIAPKRSDPCPHCGKHYERLSMHRCKLAPENAASKADKGE
KKKEECPACGGTFERIASHRCKGKVVVANGGGGGDGGAEAGGKRPREESH
DGDEDSAIANGGDVAKPAAKHYKTMGEYLGFVKEVMADGQKEFGLDMSVQ
VFKQRTVLCAQMHTPGWLEATASASLPTARGRKATSEKKRMSKSRGEGPD
GGVDAALESMEGLPHQQGSEDDHQLVFMEPGEGKTGVCKWRRCNYCQPNK
FPGYQGRTPLGCKGCDFFFHPECYRDYHNSNGIAAEPVPGTV*

mRNA from alignment at Contig_42:783264..790038-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5708 ID=mRNA_5708|Name=jgi.p|Trimin1|349417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6775bp|location=Sequence derived from alignment at Contig_42:783264..790038- (Tribonema minus UTEX_B_3156 )
ATGGACAGGAAATCGAGCAAGAAGAAATCTAAACCAGACCCTGCGCCAAA
GAGCGCCGACAGCGACTCCGATGCCACAATCGAGTCTGACAGGTGCGACC
CCCTCGTCTCCGCTGCTATTATTCCTGTTGGTACATACGCCATGCTCACC
TACTCGTTGCATTTCAAGAAAGCGTGACCGAATCATGCCAACTGCCACAT
TGTGCACGCCACTTGCAGGCCACCAGCGGTCAAGAGCAAGGAACAATCTA
CTCACAAGAAGAAGGATCGCGCTGACGAGCCGTCTCAACCTGATGCTGCT
AGTGGTGAGTGTGCGTCACAACTCTGCATCGAGCAATGCACGAGTTCAAG
CAATATGCACGGCAAACAGCAATCAAACTGCGCGAGTTTGCTTGTAGCAG
GCTGGCTGCCCTCTTAATTGCTCATTGATGAGTCAGTGGGAGCAAGAGCA
GACACAATTCGGTGATCTTGGTGTGCTGCTGCTGCTGCTATTCCTTGGGT
GTTGGCCTGCTCAGACGATTGCTGCTGCCAAGCACATGCGCGCACATGTG
TGGTGCGATCATAACCTGGAAGTCTGCCGCGGGTGCATGTGTTTTCTATG
TGGTGTGCTTTGAAAACGCCTGCTAGTAGCACACGCTGACGCTGCAGCTT
CATTTTTGCCGTGCAGCACTGAAACCCAAGAAGGACAAGAAACAAAAAGA
CGGTGGAAGCAAGGCAGCCGCAGCGGCCACACCCGTCAACCCCTCTAAGC
CAGTGAAGGACAAGACAACTTCCAAACAGAAGCCTGCCGACAAGGTTGAG
AAAACTGCCTCCAAGCCGTCTAAGGAGGGCCACAAGAAAGGCGATGGCGC
CGTGAGCGCGGCTAAGAGCAAAGACAGCGGCGCTGCATCTGGGCCCCCAG
CCACCGCTGCGAAGGGCAGCAAGGAATCGTCAAAAGCTAAGAGTGGCACC
GCTGGCAAGGCAGCAGGAGCTGCTGCTGCTAGCGCGCCTGCTAAGGTTCG
TGCATCAGCTGAGGGTGATAAGAAGAAGAAGGCCAAGAAGGCATCAAGCG
GATCCAGCGACGCCAGCGACGGCAACAGCAGCAGCAGCAGCAGCGACGGC
AGCAGCAGCGGCGGCAGCAGCGACAGCAGGCAAGGCTCAATGGTTACTAC
ACTGCGGTCTCGTATTTGCCTGAAATGTCGATGTGCGTGCTTGCCTGACG
CAACCCAGTTGTTGATTGCACTTTCTAGTCAAGATTACCCGCTGTCACAG
GTCTGCATTCGCACCATCAGAGCCCAGTTTATCGTGTGCAGTTTTCGAGG
TGCCACAGAATCATGTACATGACGTGATTGCAACTCGCGCTTGTTCTGTA
AGTGCAGGTCAGGCTCTGAACTTCACACTTCAGAGATTGCGCATCATGCC
GTGCTACATGGCACGCATTCTCAATATAGCTGTGCACTGCTGGTTATAGT
GTATATGATCACCTCAAATGATGTGGATCTGGCGTGTTGACCTCGTACAT
GCAGCTCTGACTCGGAGTCGGACTCTGGCAGTAGCAGCAGCGGCAGTGGC
AGCGGCAGCGGCTCGAGCAGCTCTGGCAGCGGCAGCGAATCGGAGGGCTC
TAGCACGGATGATGAGAAGGACACCAAGGCAGCAGAGAAACCAAAGAAGA
AGGTCAGGCATGCTGCACCACTGCTGAGCCACAGCCTGATGACTTGTTTG
ATGCACACTGGCATACATGTACGTTCAGTTGTACGACAACGCAGTAGAGT
CACTCGACAGTGTCAGCCTGTCATTTTCTATCATGGAGGGGTGCCAGCAG
TACCAGTGATGGTGATGCGGACCTGTGGCATCTTTGCTTCTTGCTGCACC
GTCGCGCAGCTGCAGTAGCAGTGTGCCTGGCCTTGCAAGGACACTAGTGT
GAATTTGACAGCAGCAGGCAGGCAGCTTGCTTTGCGCTGTGAAGGTTGTT
CACAGGAAGGGTCATCCGTTTTTGCTGAGGACTGCATGGTAATCAGCATG
ACGCACAAGGCATGCAGTATATTCATTTCATTGTGTATGATATATGATTG
CCTATGAATACATGCAACCTGCTGAAGTTTGCATTGTTGCCACCTGCTGT
ACGTTGTGCGGTCATTCAGATCCGCTTTGGCTAAGAGTACTCAAATGCGA
TGACGGATGCCTGACTGTCCTTCACACGCAATACATCATGATACGGGGAA
GGTTGTGCTGCAGCGCATGCATACATGTAGTCGGGTCAGCATCCCTCTAC
GCAGACGCATGTCAGTCGCATCAACAATCTATCGAGTCACAGCAGCGGAT
CACCGACATGCAATTCATTGGCTCAGGTGCATGCATGTGAGATTGTGCCT
GGCTGACTCTGCAATCCCTCTCTACTGCTGCTGCGCCTCTACTTGCTTCG
CTGCTTTCGCCACAGAAACCCGCAGCAGCGGCCGCTGCAGCTGCCGACAC
CGCCCGCAAGCCTGGCGCCGCTAAGCCCGCGGCAGGGACGCCAGCGCCCA
CACCACCGGCCGATGGTTTTCCCCGCAGCGAGATTGCGCCCAAGCGCAGC
GACCCCTGCCCGCACTGCGGCAAGCACTACGAGCGCCTCTCCATGCACCG
CTGCAAGCTGGCGCCGGAGAACGCGGCCAGCAAGGCTGACAAGGGGGAGA
AGAAGAAGGAGGAATGCCCCGCGTGCGGCGGCACGTTTGAGCGCATCGCC
TCGCACAGGTGCAAGGGGAAGGTTGTGGTTGCGAATGGCGGCGGCGGCGG
CGACGGCGGCGCAGAGGCCGGCGGGAAGCGCCCGCGGGAGGAGGTGCGCT
GTGCTGCGTTGAAGTTGAAGTATACGGAGTGCGAGAGCTGGCATGCAGCA
TGCCTTTTTTAGCTGCACGTGCATCATGTGACTTGTGTGATGGCGCGTCT
GCAGCGTGCTGCATGCATGATCGGCCATTCTCTTGCTTGCCAAAGCCACC
CTGAGTGCGCAGCCACAGCTGAGGTGATGGTCCGATTTACATCTTTTCAG
CAACTGCACATTGCAAGTGTGCCCGGCACAGAGTTTCGGGAGTATCCAAC
TCCAAGAACAAGGTGTCAATGATCATGCTCTTGACAGCAAATTTTTCAAA
CGGCATGTCACGTACTCTTTTTCGATCTCTCCATGTGGAGGACCCTTCAG
GACGCTGCTCATCATCAGGATTTATATCTCCAGCACCCATTAATCGAAGG
GGACGTCTACACCGCCTTGCTCAAATTGTGCATGGGCACGCTCGCACATT
TGAGAGCTGAGCCTCTCTGCTTTCCCAGACAAAGACACGCTATGCCTGCA
TTCTGCCCAGCTGCATCTTGTATTGCGGCAATGGAACTGACCTGAAAGGG
GCTGACATTTTGTCATTGTCTGCTACTCTTGCGTTATTTTGCTGTGGTGC
AGTCCCACGATGGGGATGAAGACAGTGCAATTGCGAACGGCGGAGGTGAG
CAACGTACGGCAGTGCAATCCAGTACCGGTTTGTGGACCCAAAGCTGACA
TGATGCAACCAGCAAGTGAGGCCATACATCGCTCAAACATTGGTATACTT
CACTAGTACCACCTTGCATGGCACCTGAACGTACCGTACATATGCGAGTG
TGGAATTGCTCATATTTAAACAGTACTCTGCCCCTAACAGGCCTGCATTC
CAAGTTTGCACTCATGCCCGCTACACAGGTCTTACAAGGCAGCTATGCTA
CCATTGCTGATGCACTTGATGAAGTCGTGCACACAGGTAATGCTCAATGA
TGTCCTGTACTGCTCCGTTCGCCACGACTTCTACATCTCCAGTTGAACAT
CACATGATCATATGCTTGTGCATATCTGGTTTTGATGCCGTGTTGCTCTT
GACAGATGTAGCAAAGCCTGCGGCCAAGCACTACAAGACCATGGGCGAGT
ACCTGGGGTTTGTCAAGGAGGTCATGGCGGATGGGCAGAAGGAGTTTGGC
CTCGACATGTCTGTACAGGCAAGTTCATCTTGAAGTACCGGCAGTGACTG
CACCAGCTGCAGTCTGCACGGACTGCATTGTATGATTACATGCAATCTTC
AACGAGCACTTTGCTTATGTGCAGCGTAATGTTGGATGCACTTTAGTATG
CTTTGCTGTGACAATGCACCACATTGCTGCCGATGCTGTGGTATTCTTGG
AGAAACACATTTAGGTCACCTGTTCAGAGCTGCTTGTTCTGCTTGAATGG
GTGGCATGATGATGTCCACCGTCAGTGCATGTCAACCACCACTTCCACTG
AAGTCTGCAACACGGTGCAACAGGAAACAGAAGTGTCTCTGTATGTTGCA
CTTTAAAAAAGGGTCGGTGGTCTGTCTTTTGTAACCTTGGATTGCCCCCC
TCTGCAAAGATATTGTGCAGGTGAAACTGTACTCATCTTCAAGCATTACT
GGCTTCTGTTGTCGCGCATGTTGGCGATGACACTGCAGGTGTTCAAGCAG
AGGACCGTTCTCTGCGCACAGATGCACACCCCTGGCTGGCTGGTAAGTAA
ACATGCATGCTTTCATGACCCAAAAATCTGATGTTGCATGCAGCGGATGA
TCAACTTCTGGCGGAGCGTCAAACATGCACCTGTTTGTTCCGCTACAGCT
GATGTCAGAATGTCATAGTGATCATATGCTCACATTACGCACACTATTTC
GTGAGAGTCACATACATGCTGACTTGCATGGTGACACGTAGTGGCACTGC
GTTCATGACTATTGGTGTGCCACCATTGTAGCCAGAGGCTGGTAAAGCCA
TGCACTGCAAGCATGCTTATCGCAGCATGTTGCATTGTACTGCCACTGAT
TTGATGGACATTAAGCTGCGGCACTCATGTTGGACCTGGTGTACTGCGTC
TCAATGCTAATGTTTGCTTGCATTTACTGTGCAGGAGGCCACTGCCAGCG
CCAGCCTGCCGACTGCACGTGGGAGAAAGGCTACATCTGAGAAGGCAAGT
GGCACTATACTACTGCTTGCAGGCCGCTTGACGTGATGATCTCCAGCAAC
AGCTGGTCACCATGTACGACCAGCGTTGTGATGTCAGGAAAGCGCTGAAC
TCGACATGCTGGAACCAGTCGCGTCCCTTCTCACAGATGGCATGCAATCA
TCAGCACTTTCACACGGTTACAAACAATGACAGGTTTCACGTGATGTCAC
GTAGACTATGACTTTCAGCACTGCGGCCCATTGCGCCACTGCGCTGCTGA
CTCAACTCTTGCTGCCTCACATCTGTGCGTTCACATGCCGTGCATTTAAC
AGAAGCGCATGTCCAAGAGCCGCGGCGAAGGCCCTGATGGCGGCGTGGAC
GCAGCGCTGGAGTCCATGGAGGGCCTTCCTCACCAACAGGTATGTCGTGC
CCATGATTTGGTGCTTCATGTAGCGGTTTGCCGGTCATGCCCACACGGTT
ATCATATGCAGCTACTGCTGTAGACTACATGCATATCGTAGCCGAATGAA
AGTGAATGGGTTTGATGAAGGTTGCGCCTCACACAGCGCTGGCTATGCCA
CCATGTGCACCACTCAATGACATCCGTGGCAGAGGTCAGACAAAGCCTTG
TGAATGCTTCAGTCAGCGTGGGCACGACCTCTGTTCCTGCATGTGATCGG
TTCACACCCCTTCGATCTGCGGCCGAGTTTGTGAGAACCAGAAGGTGGCG
CTCTACTTACCACTCACTCACGCGTTGTAAAAAGGCCGCCTGTACTCATA
ACAGTGTGGGTGCGCAGAGAATGAAGAGTGCACGTTTCCTGCAGCACTTG
TTCAAGAGCGAGGCTTTGATGATTATAGCGGGTGGCATACCTCTGCTTCT
GTGGGTTCTCATTCAGTTGTGTTTGGTAGGTGCCCTTTTGGCATGCAAAC
TGCTTATCTCTTGCCTTGAGGTGCAGGTGTTGCCATTGTGTTGTGCACGC
TTTTGAGCATGACTCCATTTGCTTGTGTTGGCATGTTGCGGCAGTGAACA
TTAGATATCATTAATTCACATTAAAGGTCTGTTGCTCGCCCACAGCCATC
GCTTGGTAATTTTCCACTCAAAGCATTGCTGTCTCCGCGCAATTTCAGGG
CAGTGAGGACGACCACCAGCTGGTATTCATGGAGCCGGGCGAGGGCAAGA
CTGGTGTGTGCAAGTGGAGACGCTGCAACTACTGCCAGCCAAAGTGAGGA
ATGCTGCAACTGATCACTGCCTGTAGCACCCGTACTGGTCTGGCGTGGAT
GGAATTGCAGGCACACGGGGCATCTGTGAATGGTCGAGGGCCACTTAACG
TCGTCCATACATTAGTCTCAAGTACCTGAGTTTGCCCTGACGGAATTTCG
AAGGTGGCTTGCTCACGCCATGTACACATTTTGTGCGTGTCAAGCGCAGA
TGAGTACACACTGCATCGCTAATTTGAGACTTCTCTGCGACCGCCATTGC
TTGTTTGCTCCTATATCTGACAGCTCTACAACTGCAACGCGCGCGAAGGG
CATGACGTTGAAACGGTATACTTTCAAGTAGACAATCATCTTCTTAATTG
CAATATTGCCGACACTTGTACTCACATCGGGGTCAAGTTGCGCCAGTGGG
AGGCGCAGGCATCAATGCAGTGCTATCAAATGGAGCATTGCAAGAAAACA
CAATTTCATTGAACACACTGTCTATGGTCCGCCTCTTTGCAGCAAATTCC
CTGGCTACCAGGGCAGGACGCCCCTGGGCTGCAAGGGCTGTGATTTCTTC
TTTCACCCAGAGTGCTACAGGGACTACCACAACAGCAACGGCATAGCTGC
AGAGCCTGTGCCTGGCACCGTCTAG

Coding sequence (CDS) from alignment at Contig_42:783264..790038-

>mRNA_5708 ID=mRNA_5708|Name=jgi.p|Trimin1|349417|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1779bp|location=Sequence derived from alignment at Contig_42:783264..790038- (Tribonema minus UTEX_B_3156 )
ATGGACAGGAAATCGAGCAAGAAGAAATCTAAACCAGACCCTGCGCCAAA
GAGCGCCGACAGCGACTCCGATGCCACAATCGAGTCTGACAGGCCACCAG
CGGTCAAGAGCAAGGAACAATCTACTCACAAGAAGAAGGATCGCGCTGAC
GAGCCGTCTCAACCTGATGCTGCTAGTGCACTGAAACCCAAGAAGGACAA
GAAACAAAAAGACGGTGGAAGCAAGGCAGCCGCAGCGGCCACACCCGTCA
ACCCCTCTAAGCCAGTGAAGGACAAGACAACTTCCAAACAGAAGCCTGCC
GACAAGGTTGAGAAAACTGCCTCCAAGCCGTCTAAGGAGGGCCACAAGAA
AGGCGATGGCGCCGTGAGCGCGGCTAAGAGCAAAGACAGCGGCGCTGCAT
CTGGGCCCCCAGCCACCGCTGCGAAGGGCAGCAAGGAATCGTCAAAAGCT
AAGAGTGGCACCGCTGGCAAGGCAGCAGGAGCTGCTGCTGCTAGCGCGCC
TGCTAAGGTTCGTGCATCAGCTGAGGGTGATAAGAAGAAGAAGGCCAAGA
AGGCATCAAGCGGATCCAGCGACGCCAGCGACGGCAACAGCAGCAGCAGC
AGCAGCGACGGCAGCAGCAGCGGCGGCAGCAGCGACAGCAGGCAAGGCTC
AATGGTTACTACACTGCGCTCTGACTCGGAGTCGGACTCTGGCAGTAGCA
GCAGCGGCAGTGGCAGCGGCAGCGGCTCGAGCAGCTCTGGCAGCGGCAGC
GAATCGGAGGGCTCTAGCACGGATGATGAGAAGGACACCAAGGCAGCAGA
GAAACCAAAGAAGAAGAAACCCGCAGCAGCGGCCGCTGCAGCTGCCGACA
CCGCCCGCAAGCCTGGCGCCGCTAAGCCCGCGGCAGGGACGCCAGCGCCC
ACACCACCGGCCGATGGTTTTCCCCGCAGCGAGATTGCGCCCAAGCGCAG
CGACCCCTGCCCGCACTGCGGCAAGCACTACGAGCGCCTCTCCATGCACC
GCTGCAAGCTGGCGCCGGAGAACGCGGCCAGCAAGGCTGACAAGGGGGAG
AAGAAGAAGGAGGAATGCCCCGCGTGCGGCGGCACGTTTGAGCGCATCGC
CTCGCACAGGTGCAAGGGGAAGGTTGTGGTTGCGAATGGCGGCGGCGGCG
GCGACGGCGGCGCAGAGGCCGGCGGGAAGCGCCCGCGGGAGGAGTCCCAC
GATGGGGATGAAGACAGTGCAATTGCGAACGGCGGAGATGTAGCAAAGCC
TGCGGCCAAGCACTACAAGACCATGGGCGAGTACCTGGGGTTTGTCAAGG
AGGTCATGGCGGATGGGCAGAAGGAGTTTGGCCTCGACATGTCTGTACAG
GTGTTCAAGCAGAGGACCGTTCTCTGCGCACAGATGCACACCCCTGGCTG
GCTGGAGGCCACTGCCAGCGCCAGCCTGCCGACTGCACGTGGGAGAAAGG
CTACATCTGAGAAGAAGCGCATGTCCAAGAGCCGCGGCGAAGGCCCTGAT
GGCGGCGTGGACGCAGCGCTGGAGTCCATGGAGGGCCTTCCTCACCAACA
GGGCAGTGAGGACGACCACCAGCTGGTATTCATGGAGCCGGGCGAGGGCA
AGACTGGTGTGTGCAAGTGGAGACGCTGCAACTACTGCCAGCCAAACAAA
TTCCCTGGCTACCAGGGCAGGACGCCCCTGGGCTGCAAGGGCTGTGATTT
CTTCTTTCACCCAGAGTGCTACAGGGACTACCACAACAGCAACGGCATAG
CTGCAGAGCCTGTGCCTGGCACCGTCTAG