mRNA_5700 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349413
Unique Name	mRNA_5700
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349413 vs. uniprot
Match: A0A835Z230_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z230_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 4.840e-176
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1

Query:    1 MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPIIAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGTGSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVHVDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEGRQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGMCASGAEAWAAALA 789
            MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPIIAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGTGSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVHVDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEGRQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGMCASGAEAWAAALA
Sbjct:    1 MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPIIAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGTGSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVHVDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEGRQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGMCASGAEAWAAALA 263

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349413 vs. uniprot

BLAST of jgi.p|Trimin1|349413 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z230_9STRA	4.840e-176	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_42	contig	Contig_42:662021..673244 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349413\|estExt_Genemark1.C_Ctg_420095
Hectar predicted targeting category	other localisation
TranscriptId	349735
Track	FilteredModels1
ProteinId	349413

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349413	gene_5700	Tribonema minus UTEX_B_3156	gene	Contig_42 662021..673244 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349413	Trimin1\|349413\|estExt_Genemark1.C_Ctg_420095	Tribonema minus UTEX_B_3156	polypeptide	Contig_42 662021..673244 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5700_1	exon_5700_1	Tribonema minus UTEX_B_3156	exon	Contig_42 662021..662137 +
exon_5700_2	exon_5700_2	Tribonema minus UTEX_B_3156	exon	Contig_42 662657..662769 +
exon_5700_3	exon_5700_3	Tribonema minus UTEX_B_3156	exon	Contig_42 663044..663146 +
exon_5700_4	exon_5700_4	Tribonema minus UTEX_B_3156	exon	Contig_42 669479..669523 +
exon_5700_5	exon_5700_5	Tribonema minus UTEX_B_3156	exon	Contig_42 670607..670700 +
exon_5700_6	exon_5700_6	Tribonema minus UTEX_B_3156	exon	Contig_42 671355..671398 +
exon_5700_7	exon_5700_7	Tribonema minus UTEX_B_3156	exon	Contig_42 671795..671865 +
exon_5700_8	exon_5700_8	Tribonema minus UTEX_B_3156	exon	Contig_42 672294..672351 +
exon_5700_9	exon_5700_9	Tribonema minus UTEX_B_3156	exon	Contig_42 672833..672912 +
exon_5700_10	exon_5700_10	Tribonema minus UTEX_B_3156	exon	Contig_42 673181..673244 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5700	CDS_5700	Tribonema minus UTEX_B_3156	CDS	Contig_42 662021..662137 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_42:662021..673244+
coding sequence from alignment at Contig_42:662021..673244+

spliced messenger RNA

>mRNA_5700 ID=mRNA_5700|Name=jgi.p|Trimin1|349413|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=789bp|location=Sequence derived from alignment at Contig_42:662021..673244+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGAAGCTGTACCAGATGATTGCCAATGAAGACCGTCGTGCCGAGAG
ACTCAAAATCAAGAGGGAGAAGGCAGACTTGGAAGTGCTGGAGGCTCAAC
AGCTGCTAGCACTGCAGGAGGAAGGCATGGTGGCAGCCACAAAACCAATC
ATCGCACCCATCGCAACAGCAGATGCTGAGGACTGCAAGGACGCAGCACT
GGATATCAGCACTGACAGTGATGAAACCAGTTCGCTGCTGGCTGCGGCCG
CAATGGAGTGGTCGCTGATCTTCAGCTCGCTGCTGAGCTTCAGCGGCACC
GGCAGCTACAGAAATAGTGGGCAAGTGCTCATGAAGGTCATCGCGCGCCG
GGGCACCGAACAACCCAAGGAGAGTCAGGCAACTTGTCAGCACGTTGCGG
AGTGCGCGTGCGGTGAAGCGATGCTGGCGATGGGCGGCGATGGAGTGCAT
GTCGATGAAGCAGAAATACCAGATGTGCCTGTCGGTGCCACCATTGTGAT
CGCCAAAGTACCAGCGGAGACGGAGCATGAGCAGCCGGAAGGATACTGGC
CAGCGCAGGTGCTATGCATGCACGAGGTGGCGCAAGAGATCATGGAGGGA
CGCCAAGCTTTTCCTGAACGGAGACAGGTTTTGTTGAGGCTTCTGGCTTT
CAAGGGGCATCATGAACTGCGCTGGGTGGATGCTCGAGATCTGTCGGCAT
ATGAGGCTGACGAATATGTCAACAGTGCGGACACAGGGGCTGCAGGCATG
TGCGCGAGTGGTGCGGAGGCATGGGCTGCTGCATTGGCG

protein sequence of jgi.p|Trimin1|349413

>Trimin1|349413|estExt_Genemark1.C_Ctg_420095 ID=Trimin1|349413|estExt_Genemark1.C_Ctg_420095|Name=jgi.p|Trimin1|349413|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=263bp
MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPI
IAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGT
GSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVH
VDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEG
RQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGM
CASGAEAWAAALA

mRNA from alignment at Contig_42:662021..673244+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5700 ID=mRNA_5700|Name=jgi.p|Trimin1|349413|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11224bp|location=Sequence derived from alignment at Contig_42:662021..673244+ (Tribonema minus UTEX_B_3156 )
ATGCGGAAGCTGTACCAGATGATTGCCAATGAAGACCGTCGTGCCGAGAG
ACTCAAAATCAAGAGGGAGAAGGCAGACTTGGAAGTGCTGGAGGCTCAAC
AGCTGCTAGCACTGCAGGTATGTATGTATGTGTTTGTGTGCCGCGACGCT
CCAACATGTTGAGGCTGTGCCAGGTTGATTGTTGCCAATATCTCACCTTG
TGCCAATTGCAATGACATGCAGTGACATTGCAGGTGTCATGTGGTAGCAC
AGTCTTCTCGCATGACACTGAGGCAATGGCCCATGTGTTCACACGATGCA
GGCACTGCGATTGATGTAGAGAGGCAGTGGCTATACTGCTTGCATAGGTA
CATGTATCCAGCGGCAGATCTATAATCTGCAATTGTCATCGTGGCTTTGG
GTAGCATTATTGATGAGCTCCTATGGCAGAAGCGGTGATTGTCCAGATGG
CTAAGACCAGTTTCAAAGCACTTGTCTACCGTTTGGCATGGTCAGTGTGT
ACTTGATGCACCAGTGATGTAACCACGCATGCCCAATGTGTCGTGACTTT
TCAGGTTGCCAGTGCTGCACCAGCGGTGTCACCCGCCGCTTCTGTTTGTA
CCCTTGCAGACTGCTGACCGCTGTGCGCCATTGAAGGAGGAAGGCATGGT
GGCAGCCACAAAACCAATCATCGCACCCATCGCAACAGCAGATGCTGAGG
ACTGCAAGGACGCAGCACTGGATATCAGCACTGACAGTGATGAAACCAGG
TATGCTATGCCTTCGAATTTGTTTTGCAATCTACTGTTCGTGCTGATCTG
AGGTTCGCGTTCTCCGAGTTGCATCCTGCACTTTTCAGAGCAATGGCTTT
GGATCCGACCATGACCTGGTCGTGGCCTGAGTTTTTGCCTGTGCCACTGC
ATGTTGTGCACTTCATTTCATGTCCACTTTGATCTATGGCGCATCTACAC
GATGGCCAAGTATGAGAACCGTGCGCGATGTAGGCAAGTGCTGCAGCGCC
CGTGCATCTGTGTTTCTCTGCAGTTCGCTGCTGGCTGCGGCCGCAATGGA
GTGGTCGCTGATCTTCAGCTCGCTGCTGAGCTTCAGCGGCACCGGCAGCT
ACAGAAATAGTGGGCAAGTGCTCATGGTGCCCCCAAAGCAGCCTACAGGG
AAGACGAGGGCTGCATTGAAAGGGGAAGCATGGGGGGGTAGTGTGGCAGC
AGCACTCAGGATGGTGCACACACAAGACCACTTGACTGAGGCAAGCAAGC
GCTGTACGTCACCTCTGTCAAACGACGCGCATCACTCCTGTTGCGAGGTG
GAAGAACTGAGCAGAACTCAATCACCTGACCACCTGAACCGGTCCAGGAT
AAAGCTGCCAGTTGATGGCAAGGTCCCTCCTTGCGACGTGCTTTGAATTG
TGTTGTTCAAGTTATGGAGGCACTTGCAGCATCAGCAAAGTAGCTGCTGC
TACTTTGCCTGATGCATAGAAGTATACCTTATAACTATGGCTGCATCGCA
GTACTGTGGTGGGTTTATTTTTTGCGTAAGTCCTCACCAGAGCCAACTGC
TGCACGTCGGACAGTTTTCTGCTTGCTGGTTCTCAAGCGTCGCCTGTACT
TCTTCAATGGTCAGTTACTGCCATAACAAGCACATTATGACAAACCTCAC
GCATATGGAACCTCAAAGCCAGAGTTTAGGGCTCTTCATGCTGCGCCATA
CGCGGTTCATTCACTACCCTTCTCGAGGGAAGCAAGGACGTTGGCATCTT
ATGACAGCAAGCTTTTCAATTTCGTCTTGGCTTGGCTAATATTTGTGCAG
CACACTTCATGCTCCTGTTGGGAAGCTTTTTGCTGCCTTGATCACACCAA
CTGGGAATCTGTGATCAGGCCTGCAAACGCCACTGTTTGCCGTACCTAAC
GGTGTTCCATTCATTTTGGTGGTTGCATCACTTCAAGACACGGTCAATGA
TAGTTACAGCGCTGCAACTCCATTCTGTCACTTTTTCAAGCGCTTGCAAT
AACCCTGGTGTGCATGCAGGTGCGCAAGGATGGGCCACGCTGGGCTGCAG
TTTCAGGCACTGTGAGCGCTGTGCTGCAAGCTGTGGACACAGTCCTTTCT
ACCTCTGGCGGTCCAGCTGTTTGCTCTGTGGGCGACATCTTTGCCAGTAC
CGTTGGTGCAGATGGTGCGTGGCTGAGCCTGCCCTCGTTTTGCTCCTTGA
GCATGCCGGTGCATTGCATTTCATGGCATTGCCTAGTGGATTAGCCATTA
GCAGACATTCTTCTAGTAGAGCGCATGCATCGGTCATGTTATGCACCCAT
TACCTCTTGTAACTGATCTTGCTACGCTAAGCCTCAAATGTGGCAGAAGC
AGCAGCTAAGGTACGCAGGTGCTGCCTGCTTGCTGTCTTTGCCTGGAGTC
CGGGTGTGTGCTGCTGTATATGTGCTCACGTATCACTTTCGTCATTGTGT
GCAGGAATGGGGTCAGCAGGTGGCAATGCCTGCGTCAATCTCGGCGCAGC
AGTGGCGTTGTACGCGCATCACAATGCTCAGGTAACATATGTGGGCCGCT
CACATGAGTGCTTGATTCATTTCTTGCTGTATCATGCAAAACAGCAGCCT
GTTTTAGTGATGTAAACAGTGAAACGACTGAGAACATGCAGTAAATGCTC
CTTTGACCCAGAATGTTGCGCCGCCACGTTTCATGTTCAGTTACCATAGT
GGAGTTGAGGTTTGCAGCGTATGACGCACTTATCATACTGTGACGTGAAA
CACTGTAGCTGCTATCTGCACTTGCTGCATGACAGTGAGACATTTATTGC
AGCTCCTTGAGTTCACTCGGAAGTTTGTCCTTAACTTTCTTCATAAAAAA
GCATAACGCCGCATCATTCAAAGCTTCAGCACTCTCTCCTGTAGCACTTC
GGTCATCACGTAAGACAATGCCAACATTTGCAAAACTGTACTTTGTGCAC
TAACAGAATTTGCAGCACGGTCTTGTGTCCTGTAAACTCCCAGTGAGCAT
CCCAACCCCTACTAAACCATGATGTCCATGTAAACTTACATCTTATTCCT
GCTGATAAATTTTAGCACATTGGACAACTTTCCGCATGCATCCATGCGCA
TACATCACTCTGCCGAGACTAGCATTGTGCTTTGGCGGTAGCTGCACATA
TTATCATGTGTGGCACAGCCTGTTTGTACCTTGCTTGACACATTCTGTTG
TCACGTGTACAAGAAAATGGTGTGTTTCTGGGCGATTTCAATTCCGTGAG
TCGTTTTGATCTGGTGCACCAACACCAGCAGCAATGGCAATTTCAGTGTG
CGTCGAAGAGTACAAGGTTGAACATCGCATCATTTTTGCTTGCAGCTTCC
TTTCATTGCTGTTTACAGTTGGTAGATACATCCCATCAGTACAAGCAAAA
TTCTTGTCTCCGCGTCTTTGCTGTCTCAGTGATGGCTGTCCCGAAGTATG
CGCAATGGATGCAATAAATTCACAGAGATGCCCCGTTCTGCCATCATCGC
ACCAGTCGCGGGTACCGGTACCAGTACTCAATAACTGGTACCAGCAGCTA
CCCGTACCAGTTTAACTGGTGCGCTGTGACAACCGGTACCAGTATACTGG
TGAAACCGGTAAAAACTGGTCTGACCGGTTTTCACCTGTGGTACCAGTTT
TTTAATAGTAATGCCAGGGCTTTTCTCATATGCATAGCATACGTAGTATA
CCGTGCGATCAGTACATACAACTACAAAGGCTTCAGGAATATTGCTTGTT
AGGAGCTCGAGGATTCTAGGTTAATGCAGCCGAATGGACCCAAGTGCATA
GTGCGCAGCTCAAAGCCTTACCCGCAGCATACTAGCGCAGTATTTGCTCC
TGTAAGTGACACTCAAAGTGCACCCGTCATGATGCAAAAGCAGTCAGCAA
CATGTGTGCAGCATGCAGCCAGCAAAAGGATGGGCAGCATGCTCATATAT
CATTCTGCCTGCTGCCACGACTTCCGCTCTGCAATCGGCAGCCTTGTACT
TGTGGATCAGCGAACAACCTCTGTCATATGTGTAAACCAGGTTTTCTGTT
TACGCTGAAGCTTGAGCCTTTCGTTGGCTGCGACAGCGCATCAGAAGCGG
ATACGCGGAAACAAATCCGATCCGGTGTTGCGTTCCTCAAAATGAATCCA
TCGCGTCCCACGTCGGTTGATGGATGCTTATGCTTTACAACCAACCTGCT
ATCTCAGCCTGCAGAAGCTGCTTGTGCATTTGGCGACATCAAACAGTTGC
GCATCCATGTTCGATTTTTGCGCCATATGGACCGCTTGCATGCCATCACT
AGCCGAACCCATATTTCAACAGCAGCATCAGTAGGTCGACTCACGACCAC
ATCTGCCAATATACACCGTCAATTACACCTGTCGTGTCGAGTCGTGGGTC
CTGTAACCCACGCTGAACTAACTTCAAGGCACAAAAAGAATAAACTCGCT
GAGCTGAACGGTCTACTTGCATTTCACTGGTGGCGCCGGTCATCAGCTAC
GGCATCGGTACGTGTTTACGGGTTGCCTCACGCGGCCAGTTACCCGTACC
GGTTAGCGAGCGGCAACCAGTTACCGGTTAAAACTGGTACAAAAACTGGT
ACAGGTACCGGTGCTACCAGTTAACGGGGCATCTCTGCTCACCTAGGCCT
GTGTTCATCCTGCCAGCTCTGCTGCCACTACACACAACAAACTGGCATCG
CTGCAGCGAATGGACACAGCACTCTGCCTGACATCATGCTGCAGCTTCGC
GCCAAGCCAGCGAATCAAACTGCGACCACTATCTGATTATGTAGGTCTTC
TCTGTACTTGTCATAGGTTCCACGAGTTGCCGTCATTGAGTGCGGCGCGG
CATCACCAAAAGGCACGCAGGATATCTTCTCAAGAACTCACATCCCGCCT
TTCAAGCTGGCTTCTTGTCACTGGTACGACGACGATACATCTGAATGGGC
GCCAGAGCCCAATGTCCTGGAGCCAGGATTGGTCAGCTGCGCTGTGCCAC
ACACAGCAACACCTGAGCAGGTATGTGCTGTGCCATGGAGGTTTGTTCAT
ATATGTTGGGTGTCGAAGGCCACATGGTTCCCCTCCGTCAACTTCGCAAG
GGACTTTGTTGTGTGTCTCAGCACCAGGTGTTTGAATCCTGACTAAACAA
AGCAGTTTGCAGTGCAACATGTCTCATGTAGTGGAGGATCTACCGCTGAT
TAAGATTCGCTTCACCTTGATCCATGCGTTTTCAAGTAGCAAGAGAGTAT
GCTGATTATGCCGCAACAGCCCGAGTTGATGTTAGCACTCTCTGCAAGTA
TTCCATGCCTGACAATAAGGAACTGCATCTGTGCAGCGCTCGACTCGATA
AGGTGACACTTCTGCAACAGACAACTTCTGAAATGTGGCCCAGCCTTGTA
CTAAACATCACCGCGTAAACGACCCGGGGCACGTAGCTGTCAGCGAAACG
TGCAGAACCTGTCATTGGGTTGTTCACAGCACCGCGGTCATTTACCGTGA
GGTGTGGGGGGGGGGGTGCAAATGCATTCACTGTGCGTGACAGTCATGTT
GCTACTCATTGCTGCATGTGGATGTCAGGTGGACAATGCCTGCCAGACAC
TGAAGGCGCACCTCGATGAGTTCAGGCCCGGTTTGGTGGTAGCAACCATT
GCAGCGCGGTGCGGCCCAGTGAGGGACCAGGTAACCAGGAAGTCAGCTTT
TTTGTCTGTGTGCAATGGTTGTTGCAAGTGCATGACACAACGCCATCAAT
GATCAGCTTCGCACATCTTTTTTTTGACAGCTTTAGGAAGTGGGTGCACG
CTTGTGTGCCCCATTTGTCTTTTACTTGAGTCAAGTTTCAATGTCTCAAG
ACAATAGCAGCCGTGTGCTGAGGGCAGTTCACGCTCATTTCAGCACCACC
AAGGCCTGGAATCAAGCACCAATTAGTTCATGTAGTTGAATGCGTCACTG
TACGGATTGCTGATGGGAAGAAAGAAAAAGGAGAGGAAGCAGTATCGGCA
ATAGCATGGTATGAGCATTCTCATTCGCAGCTGGCTGCTGACCAGTATGG
TGCACTTCCTATGAAATTGTCCAGAACACCCACTTCAAATTGCTTCATGA
TCAGGTGGTGGAGATCTCGCCTTCCCAGCATCTCATGCTGCGACAGCAGT
CATCATGTGCATAATCCGGGCTTCACTGCATGATGTAGGGCTGCTGCTTA
TCTGTTGTACATTCAGTTGTACTGCAAAATCCTCACATTCTCGTGTGCTG
TGTGCATGCCTCACAGACTGCGCTGAAGCAAGTGATGGGAGTTATATCAG
CAGCGGCTCTGCAGCATTGTGGTCACAAGATTGTGATACTCGTCCCCCTG
GAGGCTGATGAAGTTGCGGAAACAATCTGCGCTGTGCTGAGCCGGGCATG
ATGCGCCAGGGGCAGAGCTTCAGTGACCTGCAAGTATATGGTGGTTTTCC
TTATGGCGCATTGTTGTTGTTGCTCGATGTTCGTCTCAACAGAGGAGGCG
CGGGCTGAATATCAGACCAAACTGGCCATCAGGATGCGCACGTACACCTG
GTGCTCAGTCATTTCTGTTGAGTGTAGCCTAGCTTAGTTCACATTTCACC
AGCGATGTCACACGGTGGGCCTGTTCATGGCTCATCATGCAGCGGACAAG
CAAATAAACATTGCTATGGCATTTGTACCGGTCTATGATTGCTTGGGAGC
CATTGCAGGTCGTGCGTGATGTTAGTCTCCTTTGTCAATTCCTGCGCGCT
TCGCTCTCCGTGCCTTGACCCTAGCATGATGTGCCCTTGGGATCCACTAG
CAGCTGCGATCGGGACGTGCTTGTTCCCGTGCGATGACATCGATGCGTTG
CCGCGCATTGTGCTTTTGCCATCTGGGCCGCTCCGAGTGCCTGCGTGTCA
CTCAGACAGCTTTTAAATGGCTTTCGGTCAGGAGTAAATGCGACGTGCGT
TGTCGCTGCCACGCTCATCGTTGAAGCGCTCGCAGCTGCTGCGCCTGCCG
TTCTCGCCGCTGCTGCGCCCATCACTGCCGCGCGCGCGGCTGCAATCAGC
AACAATTTTAGCCCTCATCGATGTACAGCATGCAGTTCTGGCGCCTAAGG
CTTCAGCTGCGGTGATGGCCGGTGCGGTCTGGCCGCTTCTGACGCTGGAT
GCTTCAGTTTCGAGCGCACCAAGATTTTATCTGCCCCGGCGCTGTGTGCC
GCCTGAAAGGCAGCGCAGCGCGTCGGTACTTCAACACTTTGGGGCACGTC
AACGTTGAACTTCTGTCAGGCGTGTAAAAAAAAAGGCAAAAAAAAAAAAA
AATTGGAGAGAGAGAGAGAAGCTGGTGTACAGATCGCCTGTCAGCGAAGG
GCAGGTTTGCTGGCGCGAGCGGTCTGAGGACCGCGACGCGCTCTTGTGTT
TACAGCGATCGGGATCGTACATTCTTATCTGCGAGCGAGCGCCTCCTCTC
TTCCAAAGAAGGTCATCGCGCGCCGGGGCACCGAACAACCCAAGGAGAGT
CAGGTGAGAATGATATGGCACATTCAACAGGTTAGTATATGGACCGGTCG
ACAGAAGTAGAAGCGCGCTGTCCTGCACTCGCTCGCTCGCCTCAGCGGAC
CGACGACTTTCTACCAGTTCCTTGGCTGGTAAGAAATAGCATCCACCGGA
ACGGAAAAGCACTGGCGGCTAGAGCCATGTGCAGGAGAGTTTTGAACCGG
TATGTGCAGTGGTGTAATATCCCGGGCAGCCGCGCTCCACATGTCGCCAA
AGGCGAACCGAGCTCGCATCTGACTTGGCACGACCGATGTCAAAGATCGA
GCTTTCTCGCTGTTGACCTACGTGCCGTACACCAGTGACAATACACGCGG
GACACTCGCTTGGCTGAAAGCACGGCAAGCATCACAAAGCCATTTGCAAG
ACTGCGCGGCTGGGCTGGCTCACGTGCGCCCGCCCCCGCCATCGGCCCAT
GCGCGAGAAAAACCAGTCGACTAGTCACTTTCGCCCCGGGAAAAACTGGG
TCGGTTTTTTTGGCTGGGCCAGAAGTGCCCTCTGAGCGGGAAGTCACCTC
TCAGTGGATCACCGCACGGGGCGCTCAAGCCTTTAGAGCCTTTGTCGTGG
CAGCGATCGAGTGCTTTAGAGCGCAAGCAGGATACACCGGCGCCGCGCCT
CGCGCGTCGGCGCCACATCGCACCGGAATTGCGAACATATCCAGACATCA
CAAGGTTTAGAGCCCCTCCGGCGGCGGCACACAGCCAGCGCCTGCCGCCG
CTCGCTTCAGCATAGGTGAGCATCGGGATATACTGATGCATTAGAAATCC
CGCAGGGCCGCGCCGGGTTCGCCGCCTTTCGTCACGTTCCCTCCCCAGAG
CAATTTTTCGTCTCCAGGGGGGTTCTGGCGCGCGTCGATGGATGATGCAG
CGCGTCTGCTCTTTCGCCGCGGTATGCTGTTTGTCCTGTTGCGCCGTCAA
CTTTCAACCACAAAAAGTGCGCGCCTCATGGTGCTCCGCGCTCTCCGCTC
CGTACCTAGCATGACCGCGGTCAACAGCCTGATTCAACTTGCGCTTGACA
ACCTCTTTGACTTCTGTTCGTGGTGCTCGTTTGCAGGCAACTTGTCAGCA
CGTTGCGGAGTGCGCGTGCGGTGAAGCGATGCTGGCGATGGGCGGCGATG
GAGTGCATGTCGATGAAGCAGAAATACCAGGTGCGTCGATGTTGAACATC
TGAATACGGTTTCGACCTTGGTGCTGGCACACAGGGCGTGGCACACAGGT
CATGCGCGCCTCTTCGGTGGTTAGCTTTCCGTTAGTAGAAAGGGAATCGA
TATCCGATCACCACCTTCCACTTGTACTGGCTCATTGCCAGGTGTTGGTG
TCTTCCAGTAACGCGCACGCGCTTCGTTGGCGACGTGCATTGCGACTGGT
CCGCAAACTTAGTCGGAGGCGTCCTGCTTGTTTGTGCATCATGACTCCGC
TTTTCATTTTTCTTGTCATCCACTGCTTGTCACCTGGGGTGCCACAAGTT
TATTCTATTCCTCTGTCAGATAACCTATCCCTGATTGTTGCTGTAGCTGA
AGTGCGCCTGTGTGAAGCACGAAATGTTACCAGCCACATTCACACAAAAT
ACGACCCAATCATCAGACAGTTTCATGACCACGAAAGCTGCTCGAATCCA
AGATCGCCATGTGCAACTTGCAGAGGGCTGGAGATGGCAGACTGCATGTG
CCAAAGTATTGCAACTGGAGTTGTAAGGCCATTGTTGATTTGGCAATGCG
TTGCGGGTTGGCGACAGCCTTATTTTTTGGACTTTATGTCTCAATTGCGT
CATTGTGTCTTGCTGCTCTGTCGACGATCCGCAGATGTGCCTGTCGGTGC
CACCATTGTGATCGCCAAAGTACCAGCGGTGAGTAGGACAGATTCGGCTG
CATGTTTCTCAATCACATGACTGGCAGCACCTATAAGCAGCAGCTTTGTG
TCAGTCAGTGCAGCACAAGGAATGCAGTCGTCCGGCTCAGTATAGCAATG
GCCTGCTACCTTCTCGCTCAAGCAGAGTGTGCTCATCACTATTGGAGTTT
TGTGACGTGCATGAGTTACATGACCGTTTGATCTACATGCCATGTTGCGA
GTCCTGGTATCTGGTATCACCCACCGATTGCCCCTTATCTCGAAATGGCT
CCCACGATCTATTTGCTGCCATTGCATTTTGCCAAACAATCCCTGTGAGA
GCATTCTAGCAGTTTAGCAGTGTAGTGCACCAGGTCATGCTCAATTGTTG
GTATTGTGGCATGCTGGTTTGCAGGAGACGGAGCATGAGCAGCCGGAAGG
ATACTGGCCAGCGCAGGTGCTATGCATGCACGAGGTGGCGCAAGAGTGAG
TGCTGCAACCGCACCATCAATTGCACTGCATTGCTCGGTGTAGCCACTGT
GCGCCTGTGGCGCCCATCCGTTCACATGCTCATTCATTATACTTCGTCTT
GATGTCCTACTTTTTTTTGTGTGAGGCAGGAAACAGAAAAGTGAGTTTGC
TTGCATGCATTCTTGCGCTACCTGCATATCTCATGATGTTACTAGTCTAG
GCCCAATACCTGTGTGGCGGTGATATTTGTCATATGTCACGAATGGTGCA
GTTCATTGATGCTGGATGTCACTTTGATTTTATAGCTATAAGTGGAAGCT
GCATTTGGGCTTGGGGATTTCAACCTGCAATTGTAATTTCGGTGTGCCTT
GTTAGTCAAGCTGCTACTGCGAATGTGTTGTTCCTTGACGGTTCTGATGT
GTTTGTATCTGCTGCTGCTGCAGGATCATGGAGGGACGCCAAGCTTTTCC
TGAACGGAGACAGGTTTTGTTGAGGCTTCTGGTGAGTAGTTGGCTGGTGC
TTGATTCGTACTAGCTTCGGCATACTATCTGCAAAGCACCCAGCTTTGTC
TTTTTATCAAGTGAGGCATCACCTCCCAAGTCACAAGACCCTGTGTCAGC
AACAGCACTTTAGTAGCAAGCGATATAACTTACAATGATTGGTGCTCAGA
GTGTTTGCATGAGTGCTCGGACTGGAGCTTTTGCTTGCCTATGCTTTGCA
CTTCATCGCTGCTGTTTCATGAGGTCATGCAGGTACTTGTGTGATTTCTA
ACAGGACTGCACTTTCAGCACGAATGAGCCCTGGTCCTTGTGTGCACCGC
CAGTGTGCATCACAAACCAGAGGCAGCACAAAGTTGTGTTGCAGTCAATA
CCGCTGTGAAGTACCCCTGTCGTAGATGTATAGAACTGGTGCGGCCTGTT
CTATGATTTTGTTAGTTGATTGGCTCATGAATAGCCTCTCAATACTCGCT
GCGCCTGCCCAGGCTTTCAAGGGGCATCATGAACTGCGCTGGGTGGATGC
TCGAGATCTGTCGGCATATGAGGCTGACGAATATGTCAACAGGCAAGTCA
CACCTTTGCTGGCTGTGCGCTTCCCACTTTCTCATTGGCAAGGTGTGTAG
CTCGCACTACAATGCTTATTTGTCAAATGCGTTTCATGTTACTACTCCAC
TGCAGGTCACCATGCACGTTGCGCCCATGATGTTCCTTGCATTGCTCTGC
TGTTGGTGGCAGACTGCTACTGCACAACAATTGTGATTTACTGCCAGACA
TGATAGGCTGAGCTCACTGTACTGGCCTTTGTAATGCCTTCGGCACGTTC
GTGTATGCAGTGCGGACACAGGGGCTGCAGGCATGTGCGCGAGTGGTGCG
GAGGCATGGGCTGCTGCATTGGCG

Coding sequence (CDS) from alignment at Contig_42:662021..673244+

>mRNA_5700 ID=mRNA_5700|Name=jgi.p|Trimin1|349413|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=789bp|location=Sequence derived from alignment at Contig_42:662021..673244+ (Tribonema minus UTEX_B_3156 )
ATGCGGAAGCTGTACCAGATGATTGCCAATGAAGACCGTCGTGCCGAGAG
ACTCAAAATCAAGAGGGAGAAGGCAGACTTGGAAGTGCTGGAGGCTCAAC
AGCTGCTAGCACTGCAGGAGGAAGGCATGGTGGCAGCCACAAAACCAATC
ATCGCACCCATCGCAACAGCAGATGCTGAGGACTGCAAGGACGCAGCACT
GGATATCAGCACTGACAGTGATGAAACCAGTTCGCTGCTGGCTGCGGCCG
CAATGGAGTGGTCGCTGATCTTCAGCTCGCTGCTGAGCTTCAGCGGCACC
GGCAGCTACAGAAATAGTGGGCAAGTGCTCATGAAGGTCATCGCGCGCCG
GGGCACCGAACAACCCAAGGAGAGTCAGGCAACTTGTCAGCACGTTGCGG
AGTGCGCGTGCGGTGAAGCGATGCTGGCGATGGGCGGCGATGGAGTGCAT
GTCGATGAAGCAGAAATACCAGATGTGCCTGTCGGTGCCACCATTGTGAT
CGCCAAAGTACCAGCGGAGACGGAGCATGAGCAGCCGGAAGGATACTGGC
CAGCGCAGGTGCTATGCATGCACGAGGTGGCGCAAGAGATCATGGAGGGA
CGCCAAGCTTTTCCTGAACGGAGACAGGTTTTGTTGAGGCTTCTGGCTTT
CAAGGGGCATCATGAACTGCGCTGGGTGGATGCTCGAGATCTGTCGGCAT
ATGAGGCTGACGAATATGTCAACAGTGCGGACACAGGGGCTGCAGGCATG
TGCGCGAGTGGTGCGGAGGCATGGGCTGCTGCATTGGCG