mRNA_5688 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349405
Unique NamemRNA_5688
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A836CD77_9STRA (SAS-6_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD77_9STRA)

HSP 1 Score: 1190 bits (3078), Expect = 0.000e+0
Identity = 712/712 (100.00%), Postives = 712/712 (100.00%), Query Frame = 1
Query:    1 MGEELDREKPLFNQAIPVQVKYPDHEKLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLGMGGSSAPPPPFSVPPMFPASAAPPTMAGAGNGGYTFGAGSVSGGHAEQAAITEVPPSPPRRHTYFTGDAGGDGAGRPYGLSAYATPGATTSRDGGNGIGMYTQDTYTTPGAVATGASENAPVSDNVAAGERYITANLKRELGAKGGRGLWLEGDPGLAALLGGRRGGKGVAVVTPEGAEVDKKRSVARASVKAY 2136
            MGEELDREKPLFNQAIPVQVKYPDHEKLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLGMGGSSAPPPPFSVPPMFPASAAPPTMAGAGNGGYTFGAGSVSGGHAEQAAITEVPPSPPRRHTYFTGDAGGDGAGRPYGLSAYATPGATTSRDGGNGIGMYTQDTYTTPGAVATGASENAPVSDNVAAGERYITANLKRELGAKGGRGLWLEGDPGLAALLGGRRGGKGVAVVTPEGAEVDKKRSVARASVKAY
Sbjct:    1 MGEELDREKPLFNQAIPVQVKYPDHEKLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLGMGGSSAPPPPFSVPPMFPASAAPPTMAGAGNGGYTFGAGSVSGGHAEQAAITEVPPSPPRRHTYFTGDAGGDGAGRPYGLSAYATPGATTSRDGGNGIGMYTQDTYTTPGAVATGASENAPVSDNVAAGERYITANLKRELGAKGGRGLWLEGDPGLAALLGGRRGGKGVAVVTPEGAEVDKKRSVARASVKAY 712          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A6H5KCL7_9PHAE (SAS-6_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCL7_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 3.580e-83
Identity = 223/539 (41.37%), Postives = 271/539 (50.28%), Query Frame = 1
Query:    1 MGEELDREKPLFNQAIPVQVKYPDHE-KLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSST---------------NSGSSAQPHAALAQGGV--FLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLGMGG 1563
            M EELDRE+PLFN  + VQVK P++  K L LT+RVL G+R AP   +GGG RE VLH+E+TDELDPFFLYTLQVGEDDYHQLKHDQ LRVDF +FPR+FIELL+SC +SS +                  G  ++    L   G   FLARLET              GG S FSV+ETN FKELTHLSL+FR GNDA++K YLAARLRQL+ E +       D      R            +ALR  RERDLRDLRAAH                          XX           +  RL  +E R                              A   +  ALREAN                                                  +L    +AY+ +VVALQE+LEASV EINRGNAIIQ++Q +++ALRSK +LK++VI+QQER+L++   +                   A  + L+REL A E R+ E ARLL SNQQVI WLNKELNDA +  GG
Sbjct:    1 MAEELDRERPLFNDEVAVQVKLPENVCKTLALTVRVLQGSRLAPV-GSGGGQREGVLHIEVTDELDPFFLYTLQVGEDDYHQLKHDQCLRVDFKSFPRKFIELLESCRASSGAAAVDPESRNGYTPGEEGGGRPSRGEPLLPSSGEPSFLARLET-----------VVPGGFSLFSVVETNPFKELTHLSLKFRVGNDASIKTYLAARLRQLKAEVSVTSSTLEDTRTALAREGDTRARLDSEVSALRLDRERDLRDLRAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRKAEEDVAQVSQRLRQSEQRREELTDLKFAHEAELRELRGRSEAGEAGREAATSDAKALREANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEETQEAYKGSVVALQERLEASVHEINRGNAIIQKLQGQYRALRSKAKLKSEVIKQQERLLSEHEASXXXXXXXXXXXXXXXXXXXASRESLQRELAASEGRLEESARLLASNQQVIKWLNKELNDAQMVPGG 527          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A833T8S2_PHYIN (Centriolar protein SAS N-terminal n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T8S2_PHYIN)

HSP 1 Score: 209 bits (532), Expect = 1.320e-55
Identity = 177/533 (33.21%), Postives = 262/533 (49.16%), Query Frame = 1
Query:    7 EELDREKPLFNQAIPVQVKYPDH-EKLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDE--LDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSST---NSGSSAQPHAALAQG-GVFLARLETPGTASSAASSV----------ASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLG 1554
            EE DRE PLF++   V V+YPD  EKLL LTIR+L+G R           +E V+ VE+TD+   DP+FLY   V E+++H+LK  Q+L VDFA FP   IELLQ C   S +    N+    +   +  +G  + + R       S +A  +          + S G S FS++ETN FK+LTHLSLRF  G+DAA+KAYLAARL Q+     +L         + Q    +        AAL    E  L   +     EL T R  A    +                      +L+    A+EA+                            ++A   EV            K F QEK +  L ++  AL+QQ+ D  E+V K+  L + A+    ++  +L  YR+N   LQ+KLE S++EIN+GN II+RIQ+E++ L++K+R+K  +I+QQE  + +++     A  E  + + D R+           ++ +  ++ +  +LL SNQQVITWLNKE+N+A LG
Sbjct:    2 EEYDREAPLFDRRFHVLVQYPDRDEKLLPLTIRLLTGVR----QNNAKNQKERVMRVEITDDDGADPYFLYLWSVSEEEFHELKAQQKLLVDFATFPANLIELLQCCLKDSKAIVQENAEKEQKVDDSAEEGRSISIKRSSIDAQHSRSAGPIPLSYLAVLNTSDSDGMSVFSIVETNPFKQLTHLSLRFYPGDDAAIKAYLAARLAQVGASRRSLATSLKQTTEELQGTQKSEAKLQQQLAALGYEAESTLSQEKMKFADELETQRRAATSALKQREDELNAKIDVLVERYEKELQALKKTAEASEAQVQELSRQKYQHELQIEHLRAQSQDLSQGSSALSGEVGXXXXXXXXXXXKVFLQEKQINALQVRADALQQQLADKEEVVKKTTDLLQAAKVHSEEVDESLKMYRDNHARLQQKLELSISEINKGNEIIERIQNENRTLKAKMRMKVKIIKQQEHFVEEKQLQREEALLELKSTKEDIRKRXXXXXXXXXXIKELSQKLEDSNKLLASNQQVITWLNKEINEAQLG 530          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A2R5H0D0_9STRA (Spindle assembly abnormal protein 6-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H0D0_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.750e-54
Identity = 181/546 (33.15%), Postives = 256/546 (46.89%), Query Frame = 1
Query:    1 MGEELDREKPLFNQAIPVQVKYPDHE-----------KLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAAR-----------SQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLGMGGSSA 1572
            M  ELDRE+P+F   +PV+V+    +           +  ELT+RV+ G +     +       AVLH+E+T E D +FLYTLQV E++YH+LK +Q L VDFA F  +F+ELL +C         G S + +A     G F+A L+  G  S              F ++E N FK+LTHL+LRF+ G DA++K+YLA+RLR+ + E+A    R    E  A    A           LRE  ++    L +AH   L   +EE+LR       AAA                LE++LSA +                              +     E+   R+ANR LEG  ++ EK V    L  AAL+QQ+ D  +L+AK+AA+ E A+  R  +   ++ Y+ +   LQ KLE S+ EIN+GN +I+ +Q+E +  + +VR K  VIRQQER+L D R  L            D RE AAR                                  SNQ VI +LNKE+N+A LG  G  A
Sbjct:    1 MSVELDRERPVFEGTVPVRVERAPAQGGHAVEGSEGARTTELTLRVVRGVKKTLQDS-----HVAVLHMEVTREDDLYFLYTLQVSEEEYHELKQEQSLLVDFAGFAPKFVELLAAC-------QRGQSGELNA-----GKFIAVLDLAGLPS--------------FKIVEANQFKQLTHLALRFQPGTDASIKSYLASRLRRAQHESAQRAARISALETAALEREAKLGEAERETLRLREDLDKSAEKLLSAHAETLARQKEESLRLLSQTQNAAAEQARKQQETADRRISELESQLSALQIEHRKLYEAKAAVDADLQQMKIKNASLEKSSEDGTSELDRFRKANRELEGAVYDLEKKVSEQQLTMAALKQQLEDKEDLLAKTAAMLEQAQDRRAAVEDKMNHYKASSAKLQRKLELSIKEINKGNGVIETLQAEVRQSKDRVRTKNIVIRQQERVLQDARANLE-----------DEREGAARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNQNVIAFLNKEINEAQLGPAGRIA 504          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A8K1C392_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C392_PYTOL)

HSP 1 Score: 200 bits (508), Expect = 3.260e-52
Identity = 171/538 (31.78%), Postives = 254/538 (47.21%), Query Frame = 1
Query:    7 EELDREKPLFNQAIPVQVKYPDH-EKLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDE--LDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNS-------------------GSSAQPHAALAQGGVFLARLETPGTASS-AASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHL 1551
            E+ DR++PLF++ + V V+YPD  EKL  LTIR+L+G R      A    +E V  VE+TD+  +DP+FLY   V E+++H+LK  QRL VDF  FP   IELLQ C   S   +S                   G  +    A  +     +R++ P   S  A  +   + G S FS++ETN FK LTHLSL+F  G+DAA+KAYLAARL Q+  E + L  R  +A    +R  +           L +  E +L   +     +L   RE+A +  +                      +L  R    +A                                   E+ +LR  N+ L+ K FEQEK + +L +K  AL QQV D  E+++K+  L   A+  + ++  +L  YR+N V LQ+KLE SVAEIN+GN II+RIQ+E++ L++K+++K  +++QQE ++ ++                                               SNQQVITWLNKE+N+A +
Sbjct:    2 EQFDRDRPLFDRRLRVLVQYPDRDEKLRPLTIRLLNGVR----QNASKNQKERVFRVEITDDDGVDPYFLYLWSVSEEEFHELKQQQRLLVDFPTFPSNLIELLQCCLKDSKKLSSHDDVLDKSEGDGEENSAVEGEESTKETAYLEKKNATSRVQGPVPLSYLAVLNTCDAEGESVFSIVETNPFKHLTHLSLQFFPGDDAAIKAYLAARLAQVNAEKSDLSSRFNEASTTLRRTKSHEQTLAKQLDTLTQQTESELAREKMKFSDDLNAQREQAAKLLKEREDELNARLQALTQRYEEEVKALRIRADENDALVQSLQKTKYQQELQITQLTSQSHDLSSGKTVLSDELHSLRAENKSLDQKVFEQEKKINQLEMKVVALNQQVTDKEEVISKTTELLHAAQHHKQEVEDSLKMYRDNHVRLQQKLELSVAEINKGNEIIERIQNENRTLKAKMKMKGKILKQQEDLIDEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASNQQVITWLNKEINEAQI 535          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A7S3BTM8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BTM8_9EUKA)

HSP 1 Score: 200 bits (508), Expect = 8.370e-52
Identity = 162/509 (31.83%), Postives = 244/509 (47.94%), Query Frame = 1
Query:   31 LFNQAIPVQVKYPDHE-KLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLG 1554
            ++  ++PVQ+K+P+ E +   LT+ +         +  G    + VLH++LTDE DP+ LYTL + EDD+H LK +Q + VDFA FP + +ELL+ C +              AA  +   F+ +             V+S  G   F+V ETN F++L HLSLRF +GND ++K YLAARL + + + A             Q  AA           + E   R +  L+  H  EL  A+E A+   +  A                   + +   +AAE R                            A    ++ + LRE N  L       E+A     ++ +AL Q +RD  +L+A +AA  E A+  + Q  AAL+ Y++ +  LQEKL+AS AEI +GN II  +Q+E +ALR K+RLK  V++QQ+  +A ++    A+    +  +A   E  A  Q+ +    +   ++AE   LL SNQQVI WLNKELNDA  G
Sbjct:   15 VYRGSVPVQLKHPEREDRSTTLTVALT--------YTVGQPRNQQVLHIQLTDESDPYLLYTLDISEDDFHLLKTEQSILVDFATFPSKLVELLRQCQA--------------AATEEHPRFVGQ-------------VSSMTGVPTFTVTETNPFRQLAHLSLRFVAGNDVSIKKYLAARLTEFKAKLATSLEEVAQRTEQLQETAALASQQSERLRTIEEDHSRYVSALQVQHAGELADAKERAVTAQQDQALKTDQERATLTEKHSAAIAAAKDAQAAAETRVAQITAAQHELELQLRERSNRLESVEQDATLLRQQNSTLREENSALSSSKHTLERAASAREVELSALAQSIRDKDQLLASTAAHLEAAQEAKRQQDAALELYKDTISKLQEKLKASAAEITKGNEIINTLQTECRALRGKLRLKMAVLQQQQDQVAQKQQEADASGRACSELRAQLAELTAEKQRAEDSHGSCRQQLAEAQELLRSNQQVIQWLNKELNDAQTG 488          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A1V9YEQ7_9STRA (Spindle assembly protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEQ7_9STRA)

HSP 1 Score: 196 bits (497), Expect = 8.410e-51
Identity = 165/532 (31.02%), Postives = 261/532 (49.06%), Query Frame = 1
Query:    7 EELDREKPLFNQAIPVQVKYPDH-EKLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTD--ELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQL--------------RGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHL 1551
            +E DREKPLF+  + V V+ PD  EK   LTIR+LSG R           +E VL +E+TD  EL+ FFLY   V E+++H LKH QRL VDF  F   F++LL  C   +    S   A+P         +LA L T   A+         G    FS++ETN FK LTHLSL F+ G+DA +K YLAARLRQ               + E     R    A    Q   A+          + +     +   +     E+T  RE A++  +                       L  +++A E R                              +   +V+AL++ N+ L+   F+++K + +  L+ AAL+QQV D   +++K++ L   A   + ++   L  Y+ N  ++Q+KLE S++EIN+GN II++IQSE++A ++K+R+K+ +++QQE ++ +++      +    A Q D + +      L+++++ +  ++ E   LL SNQQVITWLNKE+N+A +
Sbjct:    2 DEYDREKPLFDGKVRVLVQTPDRDEKHAFLTIRLLSGQR-----TLNSNQKERVLRIEITDDDELESFFLYVWSVSEEEFHDLKHQQRLLVDFPKFASNFMDLLTCCLDDNRVKKSVDGARPEGQAPLS--YLAVLSTTDDAN---------GKKGVFSIVETNPFKHLTHLSLAFKPGDDAEIKLYLAARLRQTTVGSYCYCSHEQFRQNEKRQFERDLAAASVSLQSTTASELALQKQADQVAQQHAEQMNLAKMKFSEEMTAQREAAMKTLQETERQYTAKIDSLQAAAKDQSDKLLAKVAAQEERIQALTKTNYQHELKIEQMQAQVADLTDTNRSSSTDVSALQQQNKLLDQDVFKKDKLIAQQELQLAALQQQVIDKEHVLSKTSDLLAAANTHKHEIEETLKMYKANHASMQQKLELSISEINKGNQIIEQIQSENRAYKAKLRIKSKILKQQETLVEEKQLQRDEHQHLVKALQKDLQLKDDEIVLLQKKIDDLSRKLEESNELLASNQQVITWLNKEINEAQV 517          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: W2PI49_PHYPN (SAS-6_N domain-containing protein n=40 Tax=Phytophthora TaxID=4783 RepID=W2PI49_PHYPN)

HSP 1 Score: 195 bits (496), Expect = 1.420e-50
Identity = 195/552 (35.33%), Postives = 279/552 (50.54%), Query Frame = 1
Query:    7 EELDREKPLFNQAIPVQVKYPDH-EKLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTDE--LDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSS----------------SSTNSGSSAQPHAAL------AQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAA-----LREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLGMGGSSA 1572
            EE DRE PLF++   V V+YPD  EKLL LT R+L+G R           +E V+ VE+TD+  +DP+FLY   V E+++H+LK  QRL VDFA FP   IELLQ C   S                S+   G +A   +++      + G + L+ L        A  S + S G S FS++ETN FK+LTHLSLRF  G+DAA+KAYLAARL Q+     +L         + Q             +AL    E  L   +     EL     EA R+A A+A            XXXXXXX            XXXXXXXXX                     ++GR   +               K F QEK +  L ++  AL+QQ+ D  E++ K+  L + A+    ++  +L  YR+N   LQ+KLE S++EIN+GN II+RIQ+E+++L+SK+R+K  +I+QQE+ + +++     A  E  + + D R+           ++ +  ++ +  +LL SNQQVITWLNKE+N+A LG    SA
Sbjct:    2 EEYDREAPLFDRRFHVLVQYPDRDEKLLPLTTRLLTGVR----QNNAKNQKERVMRVEITDDDGVDPYFLYLWSVSEEEFHELKAQQRLLVDFATFPANLIELLQCCLKDSKKIALEDEEKEQKDGISAEKEGDTATKRSSIDAQHSRSAGPIPLSYL--------AVLSTSDSNGLSVFSIVETNPFKQLTHLSLRFSPGDDAAIKAYLAARLAQVGASRRSLASSLKQTTQELQVTQNNEAKLQQQLSALGYEAESTLSQEKMKFADEL-----EAQRRAAASALKEREEELNAKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKLKYQHEMQIEHLRTQSEDLSQGRSALSGXXXXXXXXXXXXXXKVFLQEKQINALQVRVDALQQQLADKEEVIKKTTDLLQSAKTHNEEVDESLKMYRDNHAKLQQKLELSISEINKGNEIIERIQNENRSLKSKMRMKAKIIKQQEQFVEEKQLQREEALLELKSTKEDIRKXXXXXXXXXXXIKELSQKLEDSNKLLASNQQVITWLNKEINEAQLGHQRRSA 536          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A024U0T8_9STRA (SAS-6_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0T8_9STRA)

HSP 1 Score: 193 bits (491), Expect = 5.890e-50
Identity = 168/533 (31.52%), Postives = 261/533 (48.97%), Query Frame = 1
Query:    7 EELDREKPLFNQAIPVQVKYPDHE-KLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTD--ELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGV-FLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILAD---QRDALA----AARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHLGMGGSSA 1572
            +E DRE PLF+  + V V+ P+ + +   LT+R+L+G R           +E VL +E+TD  EL+ FFLY   V E+++H LKH QRL VDF  F   F++LL  C +  +  +  SS   H    Q  + +LA L T  TA           G S FS++ETN FK LTHLSL+F  G+DA VK YLAARLRQ   E   L++      +D      +            +     L   + A+  E+T  +E AL          +                L+  L+ ++A                                   E+ AL++ N+ L+   F +EK + +  L+ AAL+QQV D  +++ KS  L + +   + ++   L  Y+ N   +Q+KLE S++EIN+GN II+++ SE++A+++K+R+K+ +++QQ+ I+ +   QRD L     A + E            +++  L ++L+       E  +LL SNQQVITWLNKE+N+A L     SA
Sbjct:    2 DEFDREAPLFDGKVRVLVQQPERDDRHTFLTVRMLNGQR-----TLNSNQKERVLRIEVTDDEELETFFLYVWSVSEEEFHDLKHQQRLLVDFPKFATNFMDLLTCCLAKPTILHESSS--NHRPEGQAPLSYLAVLNTHDTA-----------GHSTFSIVETNAFKRLTHLSLQFTPGDDAEVKLYLAARLRQTTHEKRRLQQDLATTTSDLNAAKKSESELKTQVDHAAQQHSEQLGQAKMAYSDEMTAQKEAALATLHETERMYSAKLESLRISSKDEIEQLQRNLAESQATIQSLQKTKYQHEIKLEQLELHVAQLEKSNQQHADELQALKDQNKALDHDVFTKEKLLNQSDLRIAALQQQVADKEDVIQKSTELLQASSNHKLEIEETLTMYKANNSTMQQKLELSISEINKGNQIIEQMHSENQAMKAKLRMKSKILKQQDLIVQEKEHQRDQLMHQLKALKNELLLRDDQIALVQSKNDDLAQKLD-------ESNKLLASNQQVITWLNKEINEAQLSSHKRSA 509          
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Match: A0A1V9Z548_9STRA (Ubiquitin-specific protease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z548_9STRA)

HSP 1 Score: 198 bits (503), Expect = 3.300e-49
Identity = 164/521 (31.48%), Postives = 252/521 (48.37%), Query Frame = 1
Query:    7 EELDREKPLFNQAIPVQVKYPDHE-KLLELTIRVLSGTRPAPHHAAGGGLREAVLHVELTD--ELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFIELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVASSGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAALRRRAGDAEADAQRLAAAXXXXXXXXAALREGRERDLRDLRAAHCAELTTAREEALRKAEAAATAAALSTXXXXXXXXXXXXSLETRLSAAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARGREVAALREANRGLEGKAFEQEKAVQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNVVALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILADQR---DALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLESNQQVITWLNKELNDAHL 1551
            +E DRE PLF+  + V V+  D + K   LTIR+LSG R           +E V+ +E+TD  EL+ FFLY   V E ++H LK  QRL VDF  F   F+ELL  C  +  +  +   A+P         +LA L T G            GG   FS++ETN FK LTHLSL F  G+DAA+K YLAARLRQ   E  AL R   D     Q  +A+          + +     +  L+  H  E+T   E A++  +    + +                 +T+++  E                                    +V+ L+  N+ L+   F+++K + +  L+ AA  QQ+ D  ++++K+  L + A   + ++   L  Y+ N   +Q+KLE S++EIN+GN II++IQSE++A R+K+R+K+ +++QQE I+ +++                     EE +  QQ   EL     ++ E  +LL SNQQVITWLNKE+N+A +
Sbjct:    9 DEFDREHPLFDGKVQVLVQQADRDDKHAFLTIRLLSGQR-----TLNSNQKERVMRIEVTDDEELESFFLYVFSVSEGEFHDLKQQQRLLVDFPKFASNFMELLTCCLDNEKAKKATIDARPEGQTPLS--YLAVLSTAG-----------GGGKGVFSIVETNPFKHLTHLSLDFVPGDDAAIKLYLAARLRQTTNEKLALERELNDTSLQLQLTSASELELQKQVDRITQIHSEQVGLLKIKHAEEMTAQSEAAMKNLQETERSYSAKIEALQSSTKDQIEKFQTKIAEQEQTIQDLSKLKYQNELKVEQLQTQVAELEKLNKLSHTDVSGLQAQNKQLDQDVFKKDKLIAQYELQIAAFRQQLTDKEQVLSKTTDLLQAANTHKQEVEETLKMYKTNHATMQQKLELSISEINKGNQIIEQIQSENRAYRTKLRMKSKILKQQETIVEEKQLXXXXXXXXXXXXXXXXXXKDEEFSLMQQKNNELA---RKLEESHQLLASNQQVITWLNKEINEAQV 508          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349405 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD77_9STRA0.000e+0100.00SAS-6_N domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5KCL7_9PHAE3.580e-8341.37SAS-6_N domain-containing protein n=2 Tax=Ectocarp... [more]
A0A833T8S2_PHYIN1.320e-5533.21Centriolar protein SAS N-terminal n=1 Tax=Phytopht... [more]
A0A2R5H0D0_9STRA3.750e-5433.15Spindle assembly abnormal protein 6-like n=1 Tax=H... [more]
A0A8K1C392_PYTOL3.260e-5231.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3BTM8_9EUKA8.370e-5231.83Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A1V9YEQ7_9STRA8.410e-5131.02Spindle assembly protein n=1 Tax=Achlya hypogyna T... [more]
W2PI49_PHYPN1.420e-5035.33SAS-6_N domain-containing protein n=40 Tax=Phytoph... [more]
A0A024U0T8_9STRA5.890e-5031.52SAS-6_N domain-containing protein n=1 Tax=Aphanomy... [more]
A0A1V9Z548_9STRA3.300e-4931.48Ubiquitin-specific protease n=1 Tax=Thraustotheca ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:583144..589076 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349405|estExt_Genemark1.C_Ctg_420083
BRITEko00000,ko03036
KEGG koko:K16487
GOsGO:0000003,GO:0000226,GO:0000278,GO:0000280,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007099,GO:0007275,GO:0007276,GO:0007283,GO:0008150,GO:0009790,GO:0009987,GO:0010457,GO:0015630,GO:0016043,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0031023,GO:0032501,GO:0032502,GO:0032504,GO:0040016,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044703,GO:0048232,GO:0048285,GO:0048609,GO:0048856,GO:0051298,GO:0051301,GO:0051704,GO:0070925,GO:0071840,GO:0098534,GO:0098536,GO:1902850,GO:1903047
Preferred nameSASS6
Descriptioncentriole replication
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CMEI@1|root,2QQ4W@2759|Eukaryota
Evalue7.21e-84
Seed ortholog2880.D7FSC1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative spindle assembly protein
Ec32 orthologEc-20_004960.1
TranscriptId349727
TrackFilteredModels1
ProteinId349405
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349405gene_5688Tribonema minus UTEX_B_3156 geneContig_42 583144..589076 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349405Trimin1|349405|estExt_Genemark1.C_Ctg_420083Tribonema minus UTEX_B_3156 polypeptideContig_42 583144..589076 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5688_1exon_5688_1Tribonema minus UTEX_B_3156 exonContig_42 583144..583200 +
exon_5688_2exon_5688_2Tribonema minus UTEX_B_3156 exonContig_42 583991..584152 +
exon_5688_3exon_5688_3Tribonema minus UTEX_B_3156 exonContig_42 584608..585004 +
exon_5688_4exon_5688_4Tribonema minus UTEX_B_3156 exonContig_42 585366..585471 +
exon_5688_5exon_5688_5Tribonema minus UTEX_B_3156 exonContig_42 585816..586134 +
exon_5688_6exon_5688_6Tribonema minus UTEX_B_3156 exonContig_42 586815..586865 +
exon_5688_7exon_5688_7Tribonema minus UTEX_B_3156 exonContig_42 587386..587559 +
exon_5688_8exon_5688_8Tribonema minus UTEX_B_3156 exonContig_42 587887..588057 +
exon_5688_9exon_5688_9Tribonema minus UTEX_B_3156 exonContig_42 588375..589076 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5688CDS_5688Tribonema minus UTEX_B_3156 CDSContig_42 583144..583200 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5688 ID=mRNA_5688|Name=jgi.p|Trimin1|349405|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2139bp|location=Sequence derived from alignment at Contig_42:583144..589076+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGAGAGGAGCTGGACAGAGAAAAGCCGCTGTTCAATCAGGCGATACC
AGTGCAGGTCAAGTATCCAGACCACGAGAAGCTGTTGGAGCTGACAATCC
GGGTACTATCGGGGACGAGACCAGCCCCTCACCACGCAGCAGGGGGGGGA
CTCAGGGAGGCAGTGCTCCATGTAGAGCTGACGGATGAGCTGGATCCCTT
CTTCCTCTACACACTTCAGGTGGGCGAGGATGATTATCATCAGTTAAAGC
ACGACCAGCGCTTGCGCGTGGACTTTGCCGCCTTCCCGCGGCAGTTCATT
GAGCTCCTGCAGAGCTGCAGCAGCAGCAGCAGCAGCACAAACAGCGGCAG
CAGCGCACAACCGCACGCAGCGCTGGCCCAAGGCGGAGTGTTCCTGGCAC
GGCTGGAGACGCCCGGCACAGCGAGTTCCGCGGCAAGTTCCGTGGCCAGT
TCCGGAGGCTGCAGCGCGTTCTCCGTCATGGAGACAAACCATTTCAAGGA
GTTGACGCACCTGAGCCTGCGCTTTCGGTCGGGGAACGATGCGGCGGTGA
AGGCGTACCTGGCGGCGCGGCTGCGACAGCTGCGCGGCGAGGCAGCGGCG
CTGCGGAGGCGCGCAGGCGATGCCGAAGCGGATGCTCAGCGTCTGGCGGC
TGCGGCAGCGGCAGCAGCAGCAGATGCCGCAGCGCTTCGGGAAGGCAGAG
AGAGGGATCTTAGAGACCTCAGGGCGGCGCACTGCGCGGAGCTCACAACG
GCGCGCGAGGAGGCGCTGCGCAAGGCGGAGGCGGCAGCGACGGCAGCAGC
GCTCAGCACGCGCGAGGCGTCGCGCGCCGCCGCCGACGCGCGCGCCTCCC
TTGAGACACGGCTCAGCGCTGCGGAGGCGCGGCGCGATGAGCTGGCGGCG
CGCGTGGCGACGCTGGAGGCGAGCGCGGGGGAGGCGGCGCGGCGCGCGCA
GGAGGCGGAGGGCGCGGCGGCGGCGCGCGGGCGGGAGGTCGCGGCGCTGC
GGGAGGCGAACCGCGGTTTGGAGGGGAAGGCGTTTGAGCAGGAGAAAGCA
GTGCAGCGGCTGGGTCTTAAAGAGGCTGCCTTGGAGCAGCAGGTTCGAGA
TCTACGTGAGCTGGTGGCAAAGAGTGCCGCGCTGCAGGAGGGAGCCGAGG
GGGGTCGTGGCCAGCTGGCAGCAGCGCTCGACGCATACCGTAATAATGTT
GTGGCGCTACAAGAGAAGCTGGAGGCGTCGGTGGCAGAGATCAACCGCGG
CAATGCAATCATTCAGCGCATTCAATCTGAGCACAAGGCGCTGCGCAGCA
AGGTGCGCCTCAAGACGGACGTCATCAGGCAGCAGGAGCGCATCCTGGCC
GACCAGCGCGATGCACTCGCTGCGGCGCGGGGCGAGACGGCAGCGGCGCA
GGCGGACGCACGTGAAGAGGCGGCGCGCTCGCAGCAGCTCAAGCGGGAGC
TGGAGGCGGTCGAGGCGCGAGTTGCGGAAGGTGCACGACTGCTGGAATCA
AACCAGCAAGTCATCACATGGCTCAACAAGGAGCTCAACGACGCGCACCT
CGGTATGGGCGGCAGCAGCGCTCCGCCACCCCCCTTCTCTGTCCCCCCCA
TGTTCCCAGCTAGTGCTGCGCCTCCTACAATGGCAGGCGCCGGCAATGGT
GGTTATACATTTGGTGCTGGCAGTGTCAGCGGCGGGCACGCGGAACAGGC
AGCAATCACCGAGGTGCCGCCATCGCCGCCGCGCCGGCACACATACTTCA
CTGGCGACGCAGGCGGTGACGGTGCTGGCAGACCGTATGGGCTGAGCGCG
TATGCGACACCGGGTGCGACCACAAGCAGGGATGGCGGCAATGGCATAGG
CATGTACACCCAAGACACGTACACAACGCCGGGAGCGGTGGCCACAGGCG
CTTCAGAGAATGCGCCGGTTTCCGATAACGTCGCAGCTGGCGAGCGCTAC
ATAACTGCAAACTTGAAGCGGGAGCTGGGGGCCAAGGGGGGCAGGGGGCT
GTGGCTGGAGGGGGATCCTGGCCTTGCGGCGCTGCTGGGGGGGCGACGGG
GGGGCAAGGGGGTAGCTGTGGTGACGCCTGAGGGGGCGGAAGTAGACAAG
AAGAGGTCTGTAGCGAGGGCGTCAGTGAAGGCGTACTGA
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protein sequence of jgi.p|Trimin1|349405

>Trimin1|349405|estExt_Genemark1.C_Ctg_420083 ID=Trimin1|349405|estExt_Genemark1.C_Ctg_420083|Name=jgi.p|Trimin1|349405|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=713bp
MGEELDREKPLFNQAIPVQVKYPDHEKLLELTIRVLSGTRPAPHHAAGGG
LREAVLHVELTDELDPFFLYTLQVGEDDYHQLKHDQRLRVDFAAFPRQFI
ELLQSCSSSSSSTNSGSSAQPHAALAQGGVFLARLETPGTASSAASSVAS
SGGCSAFSVMETNHFKELTHLSLRFRSGNDAAVKAYLAARLRQLRGEAAA
LRRRAGDAEADAQRLAAAAAAAAADAAALREGRERDLRDLRAAHCAELTT
AREEALRKAEAAATAAALSTREASRAAADARASLETRLSAAEARRDELAA
RVATLEASAGEAARRAQEAEGAAAARGREVAALREANRGLEGKAFEQEKA
VQRLGLKEAALEQQVRDLRELVAKSAALQEGAEGGRGQLAAALDAYRNNV
VALQEKLEASVAEINRGNAIIQRIQSEHKALRSKVRLKTDVIRQQERILA
DQRDALAAARGETAAAQADAREEAARSQQLKRELEAVEARVAEGARLLES
NQQVITWLNKELNDAHLGMGGSSAPPPPFSVPPMFPASAAPPTMAGAGNG
GYTFGAGSVSGGHAEQAAITEVPPSPPRRHTYFTGDAGGDGAGRPYGLSA
YATPGATTSRDGGNGIGMYTQDTYTTPGAVATGASENAPVSDNVAAGERY
ITANLKRELGAKGGRGLWLEGDPGLAALLGGRRGGKGVAVVTPEGAEVDK
KRSVARASVKAY*
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mRNA from alignment at Contig_42:583144..589076+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5688 ID=mRNA_5688|Name=jgi.p|Trimin1|349405|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5933bp|location=Sequence derived from alignment at Contig_42:583144..589076+ (Tribonema minus UTEX_B_3156 )
ATGGGAGAGGAGCTGGACAGAGAAAAGCCGCTGTTCAATCAGGCGATACC AGTGCAGGTGATTGTTGACGTAGTACATTCCCTTTCGCGCGTGCTTAACC CCAGTCTTGAGATTACTCCCATTGCTGCTGTCTCTGTGAAGCTTGGAGCC GTGAGGGCGTAGTGCCGCTGCGAGCTGCGTTTGTGCCTTTTGAGTTGAAT CATCATACCAGATTGTACGACGTACTCTGACATTGCCTTAGTATTGGACT GCGCGTGCATTTGTGACGACATGTCAGGCGCAGCTCTTGCCTGGCGCTGT TTGCCGTGCATCAAGTCAAATAAGTACCCAGCGCATAGAGCACTCGACTG GACTGTCTGATGAGGAGGTGTGGGTATGATTTGCCAGCGACCGCCTCTAA GCTCGCTGCTGGTGGCACATTCTGCTGTGTCCTGCAGCTGGTCCACAATA TGGCGACCCCTCTGGTGATCAGACTAGTGTCTAACAATGATCACGATGAG TAGGCACGACTCTCTGCCACAGCTCTTCAGTAGCATAGGTCCGCCCCACC TCCAACTATAAGAGGACCCAGTATGAGCCATCATGCGCCGTTTGCGGCAG TCAAGAGTCTGGAGCAGCTCTATTTGCGTTTTTTTTGTGGGTTTATGGCT GCACAGTGCAATGGCAAATTTGCGTGGGCTAGCCAGCCAACTGTGGCCTA CAGCAGCATATGGCATGCGTGTATATGGCCTGACGTCCATAATGTTGCTA CCAGGTATGAGCACCTGCTCGTAATGATACCCTCTGTGTCGATGCATCAG CGCCAGCAAGTGACTGAGCAGCCTTGCTCATTTGATGAATGCTGCAGGTC AAGTATCCAGACCACGAGAAGCTGTTGGAGCTGACAATCCGGGTACTATC GGGGACGAGACCAGCCCCTCACCACGCAGCAGGGGGGGGACTCAGGGAGG CAGTGCTCCATGTAGAGCTGACGGATGAGCTGGATCCCTTCTTCCTCTAC ACACTTCAGGTACACTCAGCAGCTGCGTGCGTGAGCGTAATTTTACCGCA CTGCAGATATTTGAGTATTGCTCTATAGTGCTGGTTTACATGGGCGTCTT CTGACCTGTACCACACCAAGGTGCTGTCACAATATCTGATGCAGCTAACG TACAGGTTTGTAGTATTTTGGATAGATCACGTCTTCCATGGCCGTGCACA TGACAAAGGTGGCAATGGGGCGTGTGCGCGTCAGTCTGTGCAGCATCTAG ACATGACGTCTGACATGTACTTCAGATACAATTTGATTCCACTGCGTGCA CGCATGGCGCTATATGATCAACACTGTTTAGCGTCGCTCATGCACTTGAT TGTCGCTGGCGATGTATATGGCGAAGCACAACCTCTCCATTGCTACCACT TCAGTGATATTTTATGCAAGGCTTATTGCTCACATTGACATGTTTCCGTG CTTGCACTTGTCAGGTGGGCGAGGATGATTATCATCAGTTAAAGCACGAC CAGCGCTTGCGCGTGGACTTTGCCGCCTTCCCGCGGCAGTTCATTGAGCT CCTGCAGAGCTGCAGCAGCAGCAGCAGCAGCACAAACAGCGGCAGCAGCG CACAACCGCACGCAGCGCTGGCCCAAGGCGGAGTGTTCCTGGCACGGCTG GAGACGCCCGGCACAGCGAGTTCCGCGGCAAGTTCCGTGGCCAGTTCCGG AGGCTGCAGCGCGTTCTCCGTCATGGAGACAAACCATTTCAAGGAGTTGA CGCACCTGAGCCTGCGCTTTCGGTCGGGGAACGATGCGGCGGTGAAGGCG TACCTGGCGGCGCGGCTGCGACAGCTGCGCGGCGAGGCAGCGGCGCTGCG GAGGCGCGCAGGTGCGTTGTCTCTGTAGTTGTGCTTGAAGGTGCACGATG CTGTACTTGAAGTTGAAGTTTGCCATGCACGGTGTGAGTGACTGGTCTCT CAGGGGCATGGTGTAGCACACCACGTGCTTATGCTTAATGCGATCGGATG GCGTCAGATCTTGTCATGCGATGCAATTTACATCAGGATGGCCTCTTCAC CATGCCATTGAGTGCCCTTGGTTGTCTACAGCAACATGTTGGTCTGGCAA CGGATAGTCGCTCATGCATCAAAGTACCTCACGATGAAGAATTGGCGACC CTCTATCAAAGTGGCATGTCAACTAAATCTCGACTCTTTCACTGTTGCAT TATTGCAAAATGTTGTTATCAGGCGATGCCGAAGCGGATGCTCAGCGTCT GGCGGCTGCGGCAGCGGCAGCAGCAGCAGATGCCGCAGCGCTTCGGGAAG GCAGAGAGAGGGATCTTAGAGACCTCAGGTATGCAGTCAAAGAGCGGCAG TCGTCGCCTGTTTGCATGACCAGAATGGCTGGGCAACTCTTGCGCTGCAT CATTCACACTAGCTTGCAAGGCTCAGAGATGCGCTTTATGCTGCTCTCTG TAGCACAGCAGTGTGCAGCACTGCCTCCATCATGTCAGCCACCAAACAAG CCGCCGCATGTGCAGACAAACAACATCACGTCGCCTGCAGACCAACTCCC AACCAACAGTGCACCTGTCGCACTTCCCACATCCGCCGACCAACGCCCAC AGCCCACTGCATGTACACACACCCTTCCTCACCCCCCCCTCCCCCTGCCC CCCCGCTACCCCCCTCCCCCAGGGCGGCGCACTGCGCGGAGCTCACAACG GCGCGCGAGGAGGCGCTGCGCAAGGCGGAGGCGGCAGCGACGGCAGCAGC GCTCAGCACGCGCGAGGCGTCGCGCGCCGCCGCCGACGCGCGCGCCTCCC TTGAGACACGGCTCAGCGCTGCGGAGGCGCGGCGCGATGAGCTGGCGGCG CGCGTGGCGACGCTGGAGGCGAGCGCGGGGGAGGCGGCGCGGCGCGCGCA GGAGGCGGAGGGCGCGGCGGCGGCGCGCGGGCGGGAGGTCGCGGCGCTGC GGGAGGCGAACCGCGGTTTGGAGGGGAAGGCGTTTGAGCAGGTGAGGGGG GCTGGAATGGGAGGGGGGGGGGGGGGGGGATGGGTGTTGTTGTTGGGAAT GTGCGGGAGGGCGGACGTGCGTCCATGTGTGGGTGTGTGTGTACTGAGTG GTGCTACGTCGTGAGAGGTGATCCGCTGTACGTCGGACTTGTGGATGCAT GGTCATAAGAGAGTCAGCACCCGAAGCACGCTGTGGTCATTTTGCTGGCA TATGAACCGCTGTCATAGTGTGCATGCGGGTTTGTGCACAGGGACTCTCA TGCTTGACCATGGTGCCGATATGACTGCAGTGCCCTGCAGACGCATGCAT ATACTGCTCAGCGAGGGGGGGTAGCACTCATATCACACCTTTCAAGTGTG TGTGATAATCAGCTGATTCGTCCTCTGATTTGCTCTACTCCGTTGTTGCT GCTCACTTGCTGTGTGGCAGTGGGCAGGATGCACTGTCTTATCAGAGCTG GGTTTCTGGTTGCAACAAGAGCATATTTGTTGACCAATAAGTAGATGATT GCACTGTGAACCACACACATCTGTGGACTCCGGGTTCGCTTTGTGGCGGC AAAAGCAGCATACTTGTATGATAGATGGTAATCTTTATTGTGAGCAGTAT GCGAGCCTTCTGCTGTGTTGCAATGCCTCTCACTGATCCGTGTCCTTGAC GCTTGTCACTACTCTTGACAGGAGAAAGCAGTGCAGCGGCTGGGTCTTAA AGAGGCTGCCTTGGAGCAGCAGGTACACAGTGCATGTCCAAGTCGATGCC ACCCGACTTCATGAATGTGGACTTGAAACTAGCGCATGAGTGTAGCTGTT TGGCAAGGCGTCAATTCCGACTCCCCCCAAGAGCAAGTGTGTATGTACTT GACTTAAGGCTCCGAGAAACATGCTTTGAAGTAGGCCCCTCAGATGTGTC TGTTGACGACGATCTGCTGGATGAGTGCGCATGCCATTACTCGAAGGACT GCCAAAACCGGCAGTTGGCATTTGGTGGTCCACCATAATGAAGCGATGCT CAACGACATGACAGTATTGGTATGTACAGCTATTTGCTTAGTGATGCTAC CAGTCGTTGCGTCGCCTGTTCAATTAATGCTGAGCTGATGTTTACAGACA AGAATCGACAAATGAGAAAAGGCTACCCGCCTACGTCGTCAGCCAATGCG TTTCGCATCATGTGACAGTATAAATGTCACGTTATGCCAGGCACAGCATC ACATGCAGTGACATATGCCTGGTGCACATGTTCACATCACAGGTTCGAGA TCTACGTGAGCTGGTGGCAAAGAGTGCCGCGCTGCAGGAGGGAGCCGAGG GGGGTCGTGGCCAGCTGGCAGCAGCGCTCGACGCATACCGTAATAATGTT GTGGCGCTACAAGAGAAGCTGGAGGCGTCGGTGGCAGAGATCAACCGCGG CAATGCAATCATTCAGGTACGTGCACATGGCCAACAAGCCGGCAATGTAT GTATTCAATTGGTCGTTTATAAATAAGTGCATGTTGGGTTCTCATACCTA TGCCACTGACATCAGCTTTTCAAGGTAGGAAGTACGAACTTCACTGGGCG TAAAGGTGTCGCAGTTGCCAAGGCGCTGGCTTGGCCGTACAGTACATATG ACGCAGTGCAGCACCATGTTCGTGATCAGGTTAGCATCTGCGCCCATTCA CTTGTTGTTGCCTATGACCGCACTTGTCCGCAAGCCGCCCAAACTTCAAG TGTGCAGTTGGCCAACCGCCACACGCCCCCGCCTCGCACGCAGCGCATTC AATCTGAGCACAAGGCGCTGCGCAGCAAGGTGCGCCTCAAGACGGACGTC ATCAGGCAGCAGGAGCGCATCCTGGCCGACCAGCGCGATGCACTCGCTGC GGCGCGGGGCGAGACGGCAGCGGCGCAGGCGGACGCACGTGAAGAGGCGG CGCGCTCGCAGCAGGTGTGTGCGCGCTGCATGGCATGTGTGTTCGTTGAT GATGGAGTGGTGGGTGCACGCGGGAGCGAAGTGCTGACATAAGAATAGTG AAGCGGTGCTGCTGGCAATGTGCGCGAGCCACAGTACTGCAGATGAGCAC ACAGTACTGCAGACGAGCACACGGTGTTTGTAGCACATGATGGAGTACTA CATACACAGTGCATGTTTGGATGGTGTGCAGCTGCCAGTGACGGGACAGT CTCCAGTTTGTACTGTTTATGAAAACTGTCATGCAGCTCATAAAATGCCC CCTCCTCCCCCCCCTCCCTTCCCTGGCGCAGCTCAAGCGGGAGCTGGAGG CGGTCGAGGCGCGAGTTGCGGAAGGTGCACGACTGCTGGAATCAAACCAG CAAGTCATCACATGGCTCAACAAGGAGCTCAACGACGCGCACCTCGGTAT GGGCGGCAGCAGCGCTCCGCCACCCCCCTTCTCTGTCCCCCCCATGTTCC CAGCTAGTGCTGCGCCTCCTACAATGGCAGGCGCCGGCAATGGTGGTTAT ACATTTGGTGCTGGCAGTGTCAGCGGCGGGCACGCGGAACAGGCAGCAAT CACCGAGGTGCCGCCATCGCCGCCGCGCCGGCACACATACTTCACTGGCG ACGCAGGCGGTGACGGTGCTGGCAGACCGTATGGGCTGAGCGCGTATGCG ACACCGGGTGCGACCACAAGCAGGGATGGCGGCAATGGCATAGGCATGTA CACCCAAGACACGTACACAACGCCGGGAGCGGTGGCCACAGGCGCTTCAG AGAATGCGCCGGTTTCCGATAACGTCGCAGCTGGCGAGCGCTACATAACT GCAAACTTGAAGCGGGAGCTGGGGGCCAAGGGGGGCAGGGGGCTGTGGCT GGAGGGGGATCCTGGCCTTGCGGCGCTGCTGGGGGGGCGACGGGGGGGCA AGGGGGTAGCTGTGGTGACGCCTGAGGGGGCGGAAGTAGACAAGAAGAGG TCTGTAGCGAGGGCGTCAGTGAAGGCGTACTGA
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Coding sequence (CDS) from alignment at Contig_42:583144..589076+

>mRNA_5688 ID=mRNA_5688|Name=jgi.p|Trimin1|349405|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2139bp|location=Sequence derived from alignment at Contig_42:583144..589076+ (Tribonema minus UTEX_B_3156 )
ATGGGAGAGGAGCTGGACAGAGAAAAGCCGCTGTTCAATCAGGCGATACC
AGTGCAGGTCAAGTATCCAGACCACGAGAAGCTGTTGGAGCTGACAATCC
GGGTACTATCGGGGACGAGACCAGCCCCTCACCACGCAGCAGGGGGGGGA
CTCAGGGAGGCAGTGCTCCATGTAGAGCTGACGGATGAGCTGGATCCCTT
CTTCCTCTACACACTTCAGGTGGGCGAGGATGATTATCATCAGTTAAAGC
ACGACCAGCGCTTGCGCGTGGACTTTGCCGCCTTCCCGCGGCAGTTCATT
GAGCTCCTGCAGAGCTGCAGCAGCAGCAGCAGCAGCACAAACAGCGGCAG
CAGCGCACAACCGCACGCAGCGCTGGCCCAAGGCGGAGTGTTCCTGGCAC
GGCTGGAGACGCCCGGCACAGCGAGTTCCGCGGCAAGTTCCGTGGCCAGT
TCCGGAGGCTGCAGCGCGTTCTCCGTCATGGAGACAAACCATTTCAAGGA
GTTGACGCACCTGAGCCTGCGCTTTCGGTCGGGGAACGATGCGGCGGTGA
AGGCGTACCTGGCGGCGCGGCTGCGACAGCTGCGCGGCGAGGCAGCGGCG
CTGCGGAGGCGCGCAGGCGATGCCGAAGCGGATGCTCAGCGTCTGGCGGC
TGCGGCAGCGGCAGCAGCAGCAGATGCCGCAGCGCTTCGGGAAGGCAGAG
AGAGGGATCTTAGAGACCTCAGGGCGGCGCACTGCGCGGAGCTCACAACG
GCGCGCGAGGAGGCGCTGCGCAAGGCGGAGGCGGCAGCGACGGCAGCAGC
GCTCAGCACGCGCGAGGCGTCGCGCGCCGCCGCCGACGCGCGCGCCTCCC
TTGAGACACGGCTCAGCGCTGCGGAGGCGCGGCGCGATGAGCTGGCGGCG
CGCGTGGCGACGCTGGAGGCGAGCGCGGGGGAGGCGGCGCGGCGCGCGCA
GGAGGCGGAGGGCGCGGCGGCGGCGCGCGGGCGGGAGGTCGCGGCGCTGC
GGGAGGCGAACCGCGGTTTGGAGGGGAAGGCGTTTGAGCAGGAGAAAGCA
GTGCAGCGGCTGGGTCTTAAAGAGGCTGCCTTGGAGCAGCAGGTTCGAGA
TCTACGTGAGCTGGTGGCAAAGAGTGCCGCGCTGCAGGAGGGAGCCGAGG
GGGGTCGTGGCCAGCTGGCAGCAGCGCTCGACGCATACCGTAATAATGTT
GTGGCGCTACAAGAGAAGCTGGAGGCGTCGGTGGCAGAGATCAACCGCGG
CAATGCAATCATTCAGCGCATTCAATCTGAGCACAAGGCGCTGCGCAGCA
AGGTGCGCCTCAAGACGGACGTCATCAGGCAGCAGGAGCGCATCCTGGCC
GACCAGCGCGATGCACTCGCTGCGGCGCGGGGCGAGACGGCAGCGGCGCA
GGCGGACGCACGTGAAGAGGCGGCGCGCTCGCAGCAGCTCAAGCGGGAGC
TGGAGGCGGTCGAGGCGCGAGTTGCGGAAGGTGCACGACTGCTGGAATCA
AACCAGCAAGTCATCACATGGCTCAACAAGGAGCTCAACGACGCGCACCT
CGGTATGGGCGGCAGCAGCGCTCCGCCACCCCCCTTCTCTGTCCCCCCCA
TGTTCCCAGCTAGTGCTGCGCCTCCTACAATGGCAGGCGCCGGCAATGGT
GGTTATACATTTGGTGCTGGCAGTGTCAGCGGCGGGCACGCGGAACAGGC
AGCAATCACCGAGGTGCCGCCATCGCCGCCGCGCCGGCACACATACTTCA
CTGGCGACGCAGGCGGTGACGGTGCTGGCAGACCGTATGGGCTGAGCGCG
TATGCGACACCGGGTGCGACCACAAGCAGGGATGGCGGCAATGGCATAGG
CATGTACACCCAAGACACGTACACAACGCCGGGAGCGGTGGCCACAGGCG
CTTCAGAGAATGCGCCGGTTTCCGATAACGTCGCAGCTGGCGAGCGCTAC
ATAACTGCAAACTTGAAGCGGGAGCTGGGGGCCAAGGGGGGCAGGGGGCT
GTGGCTGGAGGGGGATCCTGGCCTTGCGGCGCTGCTGGGGGGGCGACGGG
GGGGCAAGGGGGTAGCTGTGGTGACGCCTGAGGGGGCGGAAGTAGACAAG
AAGAGGTCTGTAGCGAGGGCGTCAGTGAAGGCGTACTGA
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