mRNA_563 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: A0A836CI92_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI92_9STRA) HSP 1 Score: 409 bits (1051), Expect = 1.800e-144 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1 Query: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHTAQGDILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHTAQGDILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS Sbjct: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHTAQGDILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 204
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: J9FF44_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9FF44_9SPIT) HSP 1 Score: 122 bits (306), Expect = 1.280e-28 Identity = 63/205 (30.73%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 4 NDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRP-DEYRYYYDTLRLHTAQGDILVPLHAYATVVTPDARLLPTIVDFGVGV-IGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 N +F P+ ++F ++ + V ++N S + QRL + P T YF IK G + G A+ I V P DEY+YYYD +R+H IL+P+HA+ + + + P VD G + +G Y + + +++ PV F++++ HP I + PL G++L T I +N+ P + T +A ++ RT++ +C+I G+ Sbjct: 61 NGIFGASPSIVKFAGFEISKTHTLKVRLINNSPAPQRLHILPPQTNYFKIKYNKKGMVPAGIAEDIYVQFTPNDEYKYYYDCIRIHCEGDKILIPIHAFPVINSKKDEIFPKYVDMGKHLKVGENYSQSINIESNCPVNFEYDIEITKAHPDIQIYPLSGDILGMQTTKIQINFTPTTYTTAEAEISFRTTEFDSQSKICRIVGN 265
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: UPI00140377B0 (cilia- and flagella-associated protein 221 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140377B0) HSP 1 Score: 120 bits (300), Expect = 7.900e-28 Identity = 64/206 (31.07%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHTAQGD--ILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 +N + E +P L F ++G+ ++V ++NISA + + P + +F +K + G + PG + ++CV PDE+RYYYD +R+H QGD +LVP+H Y V PD LP+ ++ +G E + ++ P+ F+F++ +P ITV P G + + V + P T +ATL++ SQ P C + G+ Sbjct: 63 KNQVVEAKPGILHFGGYELGKRHAQDVKLINISAECINMHIIPPQSKHFQVKYSKKGALVPGLSLRVCVEFCPDEWRYYYDCIRVH-CQGDETLLVPIHGYPVVNVPD---LPSFLNIPDTALGESREVAIPLRCSCPIDFEFQVSITQPNPAITVTPSSGLIPAHGETRLAVRFSPREFCTARATLSLLVSQFNAQPLECTVTGT 264
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: UPI001CF51560 (LOW QUALITY PROTEIN: cilia- and flagella-associated protein 221-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF51560) HSP 1 Score: 120 bits (300), Expect = 8.050e-28 Identity = 68/205 (33.17%), Postives = 105/205 (51.22%), Query Frame = 1 Query: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHT-AQGDILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 +N + + RP+ + F +G I R + + N+S SQR+ + PST YF IK T + PG ++ + PD++RYYYD +R+HT A+ +++VP+HAY + D P V F +G + +K +PV F+F L HP TV P+ G + S I V + PM T L + SQ M+P +C G+ Sbjct: 41 QNAILQARPSVVHFSGFHVGNKITRILRLANVSDESQRMHIIPPSTKYFYIKYTKKEKLVPGMFIEVLIEFTPDDWRYYYDCIRIHTKAEENLIVPIHAYPVM---DTEGFPREVHFPSVPLGESVTHVVPLKCSIPVDFEFTLSYIQLHPSFTVSPMSGIVEGNSELEIKVTFSPMDFSTAHMKLQLMVSQFNMSPLVCSFTGT 242
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: A0A8J1XR15_OWEFU (Ofus.G0689 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XR15_OWEFU) HSP 1 Score: 119 bits (297), Expect = 2.030e-27 Identity = 64/205 (31.22%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHT-AQGDILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 +N + + RP+ + F D+ + + + N+S QR+ + P T YF IK T + PG + V PDE+RYYYD +R+H + ++++P+HAY + T D PTIV+F +G+ + + +K P+ F+F+L + HP V P+ G + IVV + P VT Q L + SQ P +C G+ Sbjct: 49 QNSVAQARPSVIHFGGFDLNKTQRCTLHIANVSTEVQRMHIIPPQTKYFYIKYTKNERLVPGLTLECTVEFTPDEWRYYYDCIRIHCKGEENLVIPIHAYPVMNTSD---FPTIVNFPPVPVGHRKSRIIPLKCHAPIDFEFQLSFQQQHPAFIVEPMSGTVPANGEIDIVVTFAPSEFVTAQMKLQLSISQFNSKPLVCTFTGT 250
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: UPI001BD1E448 (cilia- and flagella-associated protein 221 n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD1E448) HSP 1 Score: 116 bits (291), Expect = 1.270e-26 Identity = 61/204 (29.90%), Postives = 103/204 (50.49%), Query Frame = 1 Query: 4 NDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHT-AQGDILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 N L + P+ L F D+GR VR + ++N+S+ + + + T YF + + PG A + V PDE+RYYYD++R+H + ++LVP+HAY + D +P + +G + +K P+ F+F++ H ++ PL+G + I+V ++P+ T Q T+ + SQ PYLC I GS Sbjct: 49 NGLIQTEPSELHFTGFDLGRDHVRTLKIINVSSEVMDVHIISTQTEYFRTTYSKKSRLIPGLAYTLKVCFCPDEWRYYYDSIRVHCKGEENLLVPVHAYPVI---DDLQIPPHIHLSAVPLGQRVSHAIPLKCSCPIDFEFQVFVIQPHEAFSISPLKGLIPANGEVKIIVTFRPLQYETCQVTIQLIISQFNTKPYLCTITGS 249
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: A0A401S464_CHIPU (Uncharacterized protein n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401S464_CHIPU) HSP 1 Score: 114 bits (284), Expect = 1.820e-26 Identity = 65/207 (31.40%), Postives = 105/207 (50.72%), Query Frame = 1 Query: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHTAQGD-ILVPLHAYATVVTPDARLL--PTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 RN + E PA L F ++G+ + + +VN+S++ + + P T YF ++ H+ PG + + V P+E+RYYYD++R+H D +LVPLHAY P A ++ PT + G +G E + ++ PV F+F++ +H T+ P G + IVV Y P+ T Q + + SQ PY C I G+ Sbjct: 53 RNKVIEAVPAILHFGGYELGKHHQQILKLVNVSSTMTNVHILPPQTKYFQVRYIKKNHLVPGMSFNVTVNFCPNEWRYYYDSIRIHCKDDDALLVPLHAY-----PVANIVEFPTYLTVGDVPLGQSKEINIPLRCSCPVDFEFQISFLQSHRAFTIQPTAGIIPANGQVDIVVKYTPLDRATAQIGIQLLISQFNSKPYTCTIIGT 254
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: A0A8J4FJA4_9CHLO (Uncharacterized protein n=4 Tax=Volvox TaxID=3066 RepID=A0A8J4FJA4_9CHLO) HSP 1 Score: 115 bits (289), Expect = 2.430e-26 Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 10 LFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAA---GHIAPGCAQKICVTCRPDEYRYYYDTLRLHTAQGDILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPG-STATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 + + PA L F +G+ + + + N+ A R + AP+T +F K T A G +APG ++++ V P YRYYYD +R+HT ++LVP+HAY + L PT VDFG +G ++ ++ ++PV F+FE++ +P V P RG ++PG T + ++ P++ T +A + VR ++ P C + GS Sbjct: 43 VLQAEPAVLNFGGYTVGQVYSQTLLIRNVRARGTRFHIIAPNTPFF--KATCANKKGLLAPGMSEEVVVEFCPSHYRYYYDCVRVHTEDENLLVPIHAYPVA---NETLFPTRVDFGRAAVGQELVRRHTLECKVPVDFEFEIVETRANPCFKVEPARG-VIPGHGTVEVTTSFCPINFTTEEAVIEVRIAEFNSKPVQCVLTGS 241
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: H2Z575_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z575_CIOSA) HSP 1 Score: 111 bits (277), Expect = 3.040e-26 Identity = 67/207 (32.37%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHT-AQGDILVPLHAYATVVTPDARLLPTIVDFGVGV-IGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTAT-IVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 +N + +V+P + F + + ++ + N S Q L + P+T YFSI T + PG ++ ++ PDE+RYYYD +R+H + +++VPLHA+ + T +R +V G+ IG K L + + PV+F+F++ +HP I V PL G ++PG T I V + PM VT T+ + SQ P+LC + S Sbjct: 48 QNSVTKVQPDVVHFAGYKLNKTQKTSIKICNASPQRQNLHIIPPATKYFSIHYTKPDRLVPGFTIEVVISFTPDEWRYYYDCIRIHCKGEENLIVPLHAFPVMDT--SRFPRKLVFPQSGIRIGESSRKILPLYSHSPVEFEFQITVLQSHPSIVVSPLSG-IVPGEGETDIAVTFTPMEYVTAHMTMQLVISQFNTKPFLCDVTAS 251
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Match: UPI0009A3799B (cilia- and flagella-associated protein 221-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3799B) HSP 1 Score: 110 bits (275), Expect = 3.790e-26 Identity = 62/205 (30.24%), Postives = 101/205 (49.27%), Query Frame = 1 Query: 1 RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSIKLTAAGHIAPGCAQKICVTCRPDEYRYYYDTLRLHTAQGD-ILVPLHAYATVVTPDARLLPTIVDFGVGVIGNWYEKKLVMKNRLPVQFDFELIAEDTHPYITVMPLRGNLLPGSTATIVVNYKPMSGVTVQATLTVRTSQLGMNPYLCKIRGS 612 +N + E PA L F ++G+ + + +VNIS++ + + P T YF +K T H+ PG + + V+ P+E+RYYYD++R+H D +LVP+HAY D PT + +G E + ++ P+ F+F++ H T+ P G + IVV Y P T Q + + SQ P +C I G+ Sbjct: 53 KNKVIEAVPAMLHFGGYELGKHHQQTLKLVNISSTMINIHILPPQTKYFQVKYTKKNHLVPGMSFNVTVSFCPNEWRYYYDSIRIHCKDDDTLLVPVHAYPVANIVD---FPTYLTVSDVPLGQSKEINIPLRCSCPIDFEFQINFLQPHRAFTIQPTAGIIPANGQVDIVVKYTPFDRTTAQIRVQLLISQFNSKPCICTIIGT 254 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133469 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_563 ID=mRNA_563|Name=jgi.p|Trimin1|133469|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=612bp|location=Sequence derived from alignment at Contig_2:354787..355398- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGCAATGATCTTTTCGAGGTGCGGCCAGCGAGCTTACGGTTCGAGATATCback to top protein sequence of jgi.p|Trimin1|133469 >Trimin1|133469|gw1.2.71.1 ID=Trimin1|133469|gw1.2.71.1|Name=jgi.p|Trimin1|133469|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=204bp RNDLFEVRPASLRFEISDMGRAIVRNVDVVNISASSQRLLVFAPSTAYFSback to top mRNA from alignment at Contig_2:354787..355398- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_563 ID=mRNA_563|Name=jgi.p|Trimin1|133469|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=612bp|location=Sequence derived from alignment at Contig_2:354787..355398- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:354787..355398- >mRNA_563 ID=mRNA_563|Name=jgi.p|Trimin1|133469|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=612bp|location=Sequence derived from alignment at Contig_2:354787..355398- (Tribonema minus UTEX_B_3156 )back to top |