mRNA_5636 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|66671
Unique NamemRNA_5636
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: A0A835Z0P5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0P5_9STRA)

HSP 1 Score: 545 bits (1404), Expect = 1.550e-195
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1
Query:   25 MRYAATVVAALATAGKAHSFVSNSSSGARPSILRTSNRMRSGAALTMGLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVKK 831
            MRYAATVVAALATAGKAHSFVSNSSSGARPSILRTSNRMRSGAALTMGLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVKK
Sbjct:    1 MRYAATVVAALATAGKAHSFVSNSSSGARPSILRTSNRMRSGAALTMGLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVKK 269          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: A0A6H5KYG4_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYG4_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 2.480e-110
Identity = 152/217 (70.05%), Postives = 179/217 (82.49%), Query Frame = 1
Query:  166 GLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVE 816
            G+  EDVLK PKWPE++PF   DF R DES D +FY  PRLV HIDD+AVKALT+YY+K LP+GADVLDICSSWVSHFP++W+HGKR GLGMNE+ELS+N QLDEY V+DLNV+  FPF D+SFDV+TCVVS+DYL    +VF E  RVLRP GK I+SMSNRCFPTKA ++W  TND EH+FIVG++FHY+G F P  +HDISPNP RSDPMYIVE
Sbjct:   56 GVSAEDVLKAPKWPEKWPFYEDDFSRMDESSDGDFYSQPRLVYHIDDSAVKALTKYYTKALPKGADVLDICSSWVSHFPKDWEHGKRTGLGMNEFELSKNVQLDEYRVKDLNVDAKFPFDDNSFDVVTCVVSVDYLNKPLEVFNEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFDPPVSHDISPNPGRSDPMYIVE 272          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: A0A6V1S5I5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S5I5_HETAK)

HSP 1 Score: 317 bits (811), Expect = 2.740e-105
Identity = 145/222 (65.32%), Postives = 171/222 (77.03%), Query Frame = 1
Query:  166 GLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVKK 831
            G+  ED+LK PKWP ++PF   DFKR DE  DT FY+  RLV HIDD AV ALT +Y +T PEGADVLDICSSWVSHFP+ WKHG+R G GMNEYELS+N QLD+Y VRDLNV P  P+ D SFD++TCVVS+DYL     +F E  RVLRP G+ ++SMSNRCFPTKA  +WL TND EH+FIVG++FHY+G F   +A DISPNP RSDPMYIV+A  KK
Sbjct:   45 GIKAEDILKAPKWPAEWPFTKDDFKRMDEEEDTVFYQDARLVYHIDDPAVGALTRFYKETFPEGADVLDICSSWVSHFPEGWKHGRRSGTGMNEYELSKNPQLDDYFVRDLNVRPELPYEDESFDLVTCVVSVDYLNQPLAIFDEVRRVLRPGGRAVMSMSNRCFPTKAINIWLQTNDLEHLFIVGSYFHYAGGFNAPEALDISPNPGRSDPMYIVQATKKK 266          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: L1JA50_GUITC (Methyltransf_11 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JA50_GUITC)

HSP 1 Score: 314 bits (805), Expect = 5.850e-105
Identity = 144/228 (63.16%), Postives = 184/228 (80.70%), Query Frame = 1
Query:  163 MGLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNW--KHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPS----RSDPMYIVEAVVK 828
            M + +EDVLKNPKWP+ +P+   DF R DES D  FY+ PRLV HIDD A+ ALT+YY+KT+PE +D+LDICSSWVSHFP+++  K GKRVGLGMN++ELS+N+QL E+VV++LN NP FPFPD+SFDV+TCVVS+DYL+   ++F E +RVLRP G+FIIS SNRCFP+KA ++WL TND EH+FI+G++FHY+G F PAQA DISP  S     SDPMYI++A  K
Sbjct:    1 MRVSVEDVLKNPKWPQSWPYSSKDFSRTDESEDEYFYDTPRLVYHIDDKAIAALTDYYAKTIPEKSDILDICSSWVSHFPKDFPQKMGKRVGLGMNQFELSKNEQLSEFVVQNLNKNPKFPFPDNSFDVVTCVVSVDYLIKPLEIFQEVSRVLRPGGRFIISQSNRCFPSKAIRIWLDTNDLEHIFIIGSYFHYAGGFNPAQAFDISPKKSIFSPPSDPMYIIQAEKK 228          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: A0A7S0E449_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E449_9CRYP)

HSP 1 Score: 315 bits (808), Expect = 2.010e-104
Identity = 145/226 (64.16%), Postives = 182/226 (80.53%), Query Frame = 1
Query:  169 LGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNW--KHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPS----RSDPMYIVEAVVK 828
            + +EDVLKNPKWPE +P+ P DF R DES D  FY+ PRLV HIDD A+ ALTEYY KT+PE +D+LDICSSWVSHFP+++  K GKRVGLGMNE+ELS+N+QL E+VV++LN N  FPFPD+SFDV+TCVVS+DYL+   ++F E ARVLRP G+FI+S SNRCFP+KA ++WL TND EH+FI+G++FHY+G F PAQA DI+P  S     SDPMYI++A  K
Sbjct:   70 ISVEDVLKNPKWPESWPYSPRDFSRTDESEDEYFYDTPRLVYHIDDKAIGALTEYYGKTIPEKSDILDICSSWVSHFPKDFPQKMGKRVGLGMNEFELSKNEQLSEFVVQNLNKNTKFPFPDNSFDVVTCVVSVDYLIQPLQIFQEVARVLRPGGRFIVSQSNRCFPSKAIRIWLDTNDLEHIFIIGSYFHYAGGFNPAQAFDITPKRSIFSPPSDPMYIIQAEKK 295          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: B8C942_THAPS (Methyltransf_11 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C942_THAPS)

HSP 1 Score: 310 bits (795), Expect = 1.570e-103
Identity = 143/217 (65.90%), Postives = 171/217 (78.80%), Query Frame = 1
Query:  178 EDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVK 828
            E VL NPK+P Q+P+ P+DF+R DES D  FY+ PRLV HIDD+AV ALT+YY+    EG DVLDICSSWVSHFP+ WK G  VGLGMNEYELSQN+QL  +VV+DLN +P FPF D  FD +TCVVS+DYL   +K+F E ARVLRP G+ IISMSNRCFPTKA+++WL TND EH+FIVG+FFHY+G F  A   DISPNP RSDP++IV+A  K
Sbjct:    6 EKVLTNPKFPPQWPYSPSDFQRSDESDDGIFYDQPRLVYHIDDSAVSALTQYYTDAFNEGEDVLDICSSWVSHFPKEWKGGNVVGLGMNEYELSQNEQLSSFVVKDLNKDPTFPFGDEEFDKVTCVVSVDYLNQPEKIFKEIARVLRPGGECIISMSNRCFPTKAFRIWLQTNDLEHIFIVGSFFHYAGQFDAATCEDISPNPGRSDPLFIVKAAKK 222          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: B5Y3G7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3G7_PHATC)

HSP 1 Score: 306 bits (785), Expect = 6.160e-102
Identity = 145/226 (64.16%), Postives = 170/226 (75.22%), Query Frame = 1
Query:  154 ALTMGLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVKK 831
            ALTM    E VL+NPKWP ++P+   DF RQDES D  FYE PRLV HIDDAAV ALT+YY++   +G DVLDICSSWV H+P  WK GK VGLGMNEYELSQN  LD YVV+DLN  P  PF D+SFD +TCVVS+DYL    +VF E  RVLRP G+ I+SMSNRCFPTKA+++WL T+D EHVFI G+FFHY+  F P    DISPNP RSDP++IV+A  KK
Sbjct:    4 ALTMSSMTEKVLQNPKWPPEWPYSAEDFARQDESDDELFYESPRLVYHIDDAAVGALTQYYAEEFKDGDDVLDICSSWVCHYPNQWKGGKVVGLGMNEYELSQNPVLDSYVVKDLNKEPTIPFDDNSFDKVTCVVSVDYLNKPLEVFQEIGRVLRPGGECILSMSNRCFPTKAFRIWLQTSDLEHVFIAGSFFHYAEKFDPPSGKDISPNPGRSDPLFIVKAAKKK 229          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: A0A1E7ELA4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ELA4_9STRA)

HSP 1 Score: 302 bits (773), Expect = 3.950e-100
Identity = 144/226 (63.72%), Postives = 176/226 (77.88%), Query Frame = 1
Query:  154 ALTMGLGIEDVLKNPKWPEQYPFKP-ADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVK 828
            ++T+G   E VL+NPK+P+++P+    DF RQDES DT FY+ PRL  HIDD AV ALT+YYS+ L EG DVLDICSSWVSH+P+++K GK VGLGMNEYELSQN QL ++VV+DLN +P FPF DSSFD +TCVVS+DYL    +VF E  RVLRP G+ +ISMSNRCFPTKA+K+WL T+D EH+FI G+FFHYS  F      DISPNP RSDP+YIV+ V K
Sbjct:    2 SITLGSMAEKVLENPKFPDEWPYSDDTDFSRQDESKDTIFYDTPRLCYHIDDDAVSALTKYYSENLKEGDDVLDICSSWVSHYPKDFKGGKVVGLGMNEYELSQNPQLTDFVVKDLNADPVFPFEDSSFDKVTCVVSVDYLNKPLQVFKEIGRVLRPGGECLISMSNRCFPTKAFKIWLQTSDLEHIFITGSFFHYSDLFDVPSCSDISPNPGRSDPLYIVKGVRK 227          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: W7U4U0_9STRA (Methyltransferase type 11 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4U0_9STRA)

HSP 1 Score: 303 bits (776), Expect = 7.080e-100
Identity = 146/228 (64.04%), Postives = 177/228 (77.63%), Query Frame = 1
Query:  160 TMGLGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHY-SGAFQPAQAHDISPNPSRSDPMYIVEAVVKK*AT 840
            TM + I DVLK+PKWPE+  F+P D++RQDES DT FY  PR V HIDD A+KALT+YY+ T P  A+VLDICSSW+SH+P+  K  + VG+GMN+ EL++NKQLDEYVV+DLNV+P  PF D SFDV+TCVVS+DYL+   +VFAE ARVL+P G  I+SMSNRCFPTKA  +WL T D  HVFIVGA+F Y S  F+P  A DISPNP RSDPM+IV+A  KK AT
Sbjct:   47 TMNVKIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKKKEAT 274          
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Match: A0A7S1B511_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B511_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.060e-99
Identity = 134/217 (61.75%), Postives = 169/217 (77.88%), Query Frame = 1
Query:  178 EDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVEAVVK 828
            E VL+NP+WPE++PF   DF+RQDES D  FY+ PRL  HID+ AV+A+T+YYS+   +G DVLDICSSWVSH+P++W  G  VGLGMNEYEL +N  L  Y VRDLN NP FP+ D+SFDV+TCVVSIDYL+   K+FAE  RV+RP GK IIS+ NRCFPTK ++LWL TND EH+F++G+FFHYSG F+P +  D+SPNP  SDP+Y++ A  K
Sbjct:   71 EKVLENPQWPEEWPFTEEDFRRQDESSDDIFYDSPRLCFHIDEPAVEAVTKYYSEVFEQGQDVLDICSSWVSHYPKDWSGGNVVGLGMNEYELRENPVLTSYDVRDLNKNPNFPYDDNSFDVVTCVVSIDYLIDPRKIFAEIGRVIRPGGKAIISIGNRCFPTKVFQLWLQTNDLEHIFVIGSFFHYSGLFEPPKCIDMSPNPGLSDPLYVITATAK 287          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|66671 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0P5_9STRA1.550e-195100.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6H5KYG4_9PHAE2.480e-11070.05Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A6V1S5I5_HETAK2.740e-10565.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
L1JA50_GUITC5.850e-10563.16Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S0E449_9CRYP2.010e-10464.16Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
B8C942_THAPS1.570e-10365.90Methyltransf_11 domain-containing protein n=1 Tax=... [more]
B5Y3G7_PHATC6.160e-10264.16Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7ELA4_9STRA3.950e-10063.72S-adenosyl-L-methionine-dependent methyltransferas... [more]
W7U4U0_9STRA7.080e-10064.04Methyltransferase type 11 n=3 Tax=Monodopsidaceae ... [more]
A0A7S1B511_9STRA2.060e-9961.75Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:281454..284066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|66671|CE66670_143
DescriptionMethyltransferase domain
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs28JTZ@1|root,2QS7X@2759|Eukaryota
Evalue5.73e-110
Seed ortholog2880.D7FVV9
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionMethyltransferase type 11
Ec32 orthologEc-01_002330.1
TranscriptId66993
TrackFilteredModels1
ProteinId66671
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|66671gene_5636Tribonema minus UTEX_B_3156 geneContig_42 281454..284066 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|66671Trimin1|66671|CE66670_143Tribonema minus UTEX_B_3156 polypeptideContig_42 281478..283992 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5636_1exon_5636_1Tribonema minus UTEX_B_3156 exonContig_42 281454..281617 +
exon_5636_2exon_5636_2Tribonema minus UTEX_B_3156 exonContig_42 281936..282072 +
exon_5636_3exon_5636_3Tribonema minus UTEX_B_3156 exonContig_42 283027..283161 +
exon_5636_4exon_5636_4Tribonema minus UTEX_B_3156 exonContig_42 283595..284066 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5636UTR5_5636Tribonema minus UTEX_B_3156 five_prime_UTRContig_42 281454..281477 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5636CDS_5636Tribonema minus UTEX_B_3156 CDSContig_42 281478..281617 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_5636UTR3_5636Tribonema minus UTEX_B_3156 three_prime_UTRContig_42 283993..284066 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5636 ID=mRNA_5636|Name=jgi.p|Trimin1|66671|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=908bp|location=Sequence derived from alignment at Contig_42:281454..284066+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAAAAGTGCGAGGTTGCAGGCGCGATGCGGTACGCGGCGACGGTGGTTGC
TGCTCTGGCGACGGCAGGCAAGGCGCACTCCTTCGTGAGCAACAGCAGCA
GCGGCGCCAGGCCCTCGATCCTGCGCACGTCGAACAGGATGCGCAGCGGT
GCAGCTCTGACGATGGGTTTAGGCATCGAAGACGTCCTGAAGAACCCAAA
ATGGCCAGAGCAGTACCCGTTCAAGCCTGCAGACTTCAAGCGGCAGGACG
AGAGCGTCGACACCGAGTTCTATGAGTACCCAAGGCTGGTGCTGCACATA
GATGATGCTGCCGTGAAGGCCTTGACAGAATACTACTCCAAGACCCTGCC
AGAGGGTGCAGATGTTCTTGACATTTGCTCATCATGGGTCAGCCACTTCC
CTCAAAACTGGAAGCACGGCAAGCGTGTGGGCCTTGGCATGAATGAATAC
GAACTGTCCCAGAACAAGCAACTGGACGAGTATGTGGTACGCGACCTCAA
CGTCAACCCAGCCTTCCCCTTTCCGGACAGCAGCTTTGACGTCATCACGT
GCGTCGTCAGCATTGACTACTTGGTAACGCTCGACAAGGTCTTTGCGGAG
GCGGCGCGCGTGCTGCGGCCCAACGGCAAGTTCATCATCAGCATGAGCAA
CCGCTGCTTCCCCACCAAGGCGTGGAAACTGTGGCTCAGCACCAACGACT
TTGAACACGTCTTCATTGTGGGCGCCTTTTTCCACTACTCAGGGGCGTTT
CAACCAGCGCAGGCGCATGACATCAGCCCCAACCCCAGCAGGTCCGACCC
GATGTACATCGTGGAGGCCGTTGTCAAGAAGTGAGCTACGCGCTATGGGC
GGAAGCAGTTCGCTTGTCCTCTGCATTGTTTTTTAAATGGATCACATCAC
AATGTTTG
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protein sequence of jgi.p|Trimin1|66671

>Trimin1|66671|CE66670_143 ID=Trimin1|66671|CE66670_143|Name=jgi.p|Trimin1|66671|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=270bp
MRYAATVVAALATAGKAHSFVSNSSSGARPSILRTSNRMRSGAALTMGLG
IEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKAL
TEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQL
DEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPN
GKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDI
SPNPSRSDPMYIVEAVVKK*
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mRNA from alignment at Contig_42:281454..284066+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5636 ID=mRNA_5636|Name=jgi.p|Trimin1|66671|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2613bp|location=Sequence derived from alignment at Contig_42:281454..284066+ (Tribonema minus UTEX_B_3156 )
AAAAAGTGCGAGGTTGCAGGCGCGATGCGGTACGCGGCGACGGTGGTTGC TGCTCTGGCGACGGCAGGCAAGGCGCACTCCTTCGTGAGCAACAGCAGCA GCGGCGCCAGGCCCTCGATCCTGCGCACGTCGAACAGGATGCGCAGCGGT GCAGCTCTGACGATGTGAGTAGTGTGCTGGCTGAAGCTGTTTATGCCAAA GCGGGCGTTCTTGGGTGTGTAAAAGTTTTTTGAATGTATATTGATACTTG CTTTGTGATAATGTCTGCTGGCGCGAAGTGCGCAACTGGCGCGAACATGA TCCAGGCACCTCGCAGCAAACAGTTGCCAACAAATTGCTGTGCACATGTA CCCCACTGTCATTAAGGCCTGATCAACATGCTCTGCATACGACTGCACGT TGTTAGAGGTCACAGTGTTGATAATGAGACGAAATGATCACGGCATCCTT GCACTTGAACTTGTGCATGCTCTGCAGAGCAGGGGTTTAGGCATCGAAGA CGTCCTGAAGAACCCAAAATGGCCAGAGCAGTACCCGTTCAAGCCTGCAG ACTTCAAGCGGCAGGACGAGAGCGTCGACACCGAGTTCTATGAGTACCCA AGGCTGGTGCTGCACATAGGCAAGTGCACTTGGTACAATTGAGTCGTGGT CACTTCCATACCATACCTGAACAGGACTGCCCATTCAGCAACAGTGAATA TGGTGCATAAAGCTATGCCTCCCAGAATCTTAGTTTGCTAATGCGAATAG TTGCTGCAGGCTTTAAAATTGTGTCCTCGCTGCCATGAGGAAATGTCTGC AACAAGTGAGAGTCTTGTGCGGGGTGCAGCATCGAAACAGCAGCTTGCCA CGCTCAAGTGCCTTGAGCACGCGCCAGTGCCCAAGGACGCGGCACAGTTG GTTGCAGGCACCTGTAACATTCAGCTTTTGCAAGAGGTGCACCCGCAAGT CCCATCTGAATGGTCTATATGTTGCGCAGCAGTGGCGAAGCGGGAGCACC TAGCTGCCCTGCATCAGGCTCGCACTGAGGGTATGTAGTGCTCTAGTGAG GTGCCATCCGATGTGTTTTTCGGTCTGCACTGCGGCAGGAACTCCTGGCC AGCGCGCCAACGCATGCGGCGCAGCTGTCGCGGACCGTTCTCGGGATGCA CCTTGTGCAATTGTGCAATGACAGTGTCGCATTGCAATGTCCGTGCGTCA CTGCAAATAGATGACTCTTATGTGCCCGCTGCTTGCCGCGTTTCTTCAGA CAAAGTACGCCCCTCGTACCCACCAGGAGGCTCTATACAGGCCAGCGCTG CGCTAGTATCTGACACAATGACACTGGGCTTGCGGGTTTGCAGCTCTTGC AGTAGCCGAATGCTCCCTGTGATGGCAACAAGTGTGCACAGTCCCAAAAA AAACGTCACTTGTGTTGGCACTGGCGTCTGCTAAGCCACTCTCAAGCCTG CAATCTGCTGTCCCTTGCCGTCGGAACCAGGTGTGTGCACCTATGCTGAT GGCTCGTCTGCGTGCTTGCTATACGCACTGCTGACGACATGACTGTGGCG ATGTCTGCATCCCCTGTACGCAGATGATGCTGCCGTGAAGGCCTTGACAG AATACTACTCCAAGACCCTGCCAGAGGGTGCAGATGTTCTTGACATTTGC TCATCATGGGTCAGCCACTTCCCTCAAAACTGGAAGCACGGCAAGCGTGT GGGCCTTGGTAAGTTCCTCGCTGAAGGTGCTCCATGTTTACAATGCCAGA CACTATGTTAGCGTATCGGATGTGAGATATCTTCAGCAGGTGCAGGCGCA CCACTTCCTGGCCGAATATCTGCAGATGCCCGCTGCATGCTCATACTGCC AGCACATGCCCAAAAGTCAACTTCTGCAACACTCTTTGCATGTGCTCTGC TGCAGTGCATTTCCTTATTGCCTCTTCTTAAAGGTAGTCGGCATATGGCG CAAGTTAGAACTCAGCGCACTTCTGAGAAGGCCGATGCAAAAGTCTCAGA TGGCATCGCTGCATGGCTCCTTCGAGCACCAATGACTTGCTCTGCCGGCA CGACACCTCAACTGCTGTTGTGACTGTCAAACCTGACCACTGCCCCCTCT GCCCCTTGCCTCAACCATGTTGCTGATGACGGTGACGGTAGGCATGAATG AATACGAACTGTCCCAGAACAAGCAACTGGACGAGTATGTGGTACGCGAC CTCAACGTCAACCCAGCCTTCCCCTTTCCGGACAGCAGCTTTGACGTCAT CACGTGCGTCGTCAGCATTGACTACTTGGTAACGCTCGACAAGGTCTTTG CGGAGGCGGCGCGCGTGCTGCGGCCCAACGGCAAGTTCATCATCAGCATG AGCAACCGCTGCTTCCCCACCAAGGCGTGGAAACTGTGGCTCAGCACCAA CGACTTTGAACACGTCTTCATTGTGGGCGCCTTTTTCCACTACTCAGGGG CGTTTCAACCAGCGCAGGCGCATGACATCAGCCCCAACCCCAGCAGGTCC GACCCGATGTACATCGTGGAGGCCGTTGTCAAGAAGTGAGCTACGCGCTA TGGGCGGAAGCAGTTCGCTTGTCCTCTGCATTGTTTTTTAAATGGATCAC ATCACAATGTTTG
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Coding sequence (CDS) from alignment at Contig_42:281454..284066+

>mRNA_5636 ID=mRNA_5636|Name=jgi.p|Trimin1|66671|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=810bp|location=Sequence derived from alignment at Contig_42:281454..284066+ (Tribonema minus UTEX_B_3156 )
ATGCGGTACGCGGCGACGGTGGTTGCTGCTCTGGCGACGGCAGGCAAGGC
GCACTCCTTCGTGAGCAACAGCAGCAGCGGCGCCAGGCCCTCGATCCTGC
GCACGTCGAACAGGATGCGCAGCGGTGCAGCTCTGACGATGGGTTTAGGC
ATCGAAGACGTCCTGAAGAACCCAAAATGGCCAGAGCAGTACCCGTTCAA
GCCTGCAGACTTCAAGCGGCAGGACGAGAGCGTCGACACCGAGTTCTATG
AGTACCCAAGGCTGGTGCTGCACATAGATGATGCTGCCGTGAAGGCCTTG
ACAGAATACTACTCCAAGACCCTGCCAGAGGGTGCAGATGTTCTTGACAT
TTGCTCATCATGGGTCAGCCACTTCCCTCAAAACTGGAAGCACGGCAAGC
GTGTGGGCCTTGGCATGAATGAATACGAACTGTCCCAGAACAAGCAACTG
GACGAGTATGTGGTACGCGACCTCAACGTCAACCCAGCCTTCCCCTTTCC
GGACAGCAGCTTTGACGTCATCACGTGCGTCGTCAGCATTGACTACTTGG
TAACGCTCGACAAGGTCTTTGCGGAGGCGGCGCGCGTGCTGCGGCCCAAC
GGCAAGTTCATCATCAGCATGAGCAACCGCTGCTTCCCCACCAAGGCGTG
GAAACTGTGGCTCAGCACCAACGACTTTGAACACGTCTTCATTGTGGGCG
CCTTTTTCCACTACTCAGGGGCGTTTCAACCAGCGCAGGCGCATGACATC
AGCCCCAACCCCAGCAGGTCCGACCCGATGTACATCGTGGAGGCCGTTGT
CAAGAAGTGA
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