mRNA_5618 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349360
Unique NamemRNA_5618
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A835YSG2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG2_9STRA)

HSP 1 Score: 1075 bits (2779), Expect = 0.000e+0
Identity = 562/562 (100.00%), Postives = 562/562 (100.00%), Query Frame = 1
Query:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMGYR 1686
            MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMGYR
Sbjct:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMGYR 562          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: D7FJK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK3_ECTSI)

HSP 1 Score: 691 bits (1783), Expect = 7.520e-244
Identity = 366/566 (64.66%), Postives = 453/566 (80.04%), Query Frame = 1
Query:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTAN----VRRGPSQPSGSAP--FTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMG 1680
            MNV +AV+ YVD+IVSD ++ GMK LLLD+ TTQ+V+MVYSQSQ++EKEVYLVE + A  + M HLKA  FI+PT E++  LC E+S PRF EYHVFF ++   +LLQQLA+AD EHEVVRQV EYYA+F A+NEDFF+AN    ++    +P  +A    +RN +A+LS+LL++K+KP+ IRYA SS  AR++A + S+QI AD IFDFRRQ GP+LL+LDR+DDPVTPLLSQWTYQAMVHELLGL DNR VL+GAPGVRK+LEEVVLSCTQDDFFAKNR++NFGDLG AVK LMDEYQ+ ++LNENI +IEDMQAFLER+PAF+SQSLNVSKHVAVLSELARLVD   LLDVSQ EQELAC+DD   H R L+EK+ S RI+  DKLRLAMLYALRYED  N  +R++K +L D G+ P+K  LLDAL+ + G A RG GL+GQ NLMS +GK IT++LQGVENVY+QHVP +MT +EAALKGKLKD  YP++  +   G+ QE+IV++VGGVTYEEA K+AELNA+ P+ +VVLGGS V NS++FLE+L      + Q   +G
Sbjct:    3 MNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKENIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAAD-EHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAAAKKLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGN--LRAVKSRLLDSGLTPEKVDLLDALLQYSGNAARGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGPSG--GKSQEVIVFMVGGVTYEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFGPASQERGLG 563          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S3M2G5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2G5_9STRA)

HSP 1 Score: 582 bits (1501), Expect = 4.390e-201
Identity = 305/562 (54.27%), Postives = 418/562 (74.38%), Query Frame = 1
Query:    4 NVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGP--SQP-----SGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADS-IFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFN-MRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTG--AQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSS 1656
            +VIA+++ YVD++VSD  + GMKALLLDS TT+IVSMVYSQ+Q++EKEVYLVE LG   + M HLKAA++IQPT  +   L RE+  P+F EYH+FFSN+V  D+L +L   D EH+++ QV EYY D+ A+NE+FF   +      S P       +A + RNVN +LS+LLS+KR P+ IRY  SS+ AR++A++ S  I  +S +FDFRRQ+GPLLL+LDR+DDPVTPLL+QWTYQAMVHELLGL +NR VLRG PG+ KELEEVVLS TQD FFA NR+ANFGDLGAAVK L++EYQR +K NENI +IEDMQAF+ER+P F+S+S+NVSKHVAV+SEL+RL D   LLD+S+LEQE++C++D   H++ L+ +I + +++  DKLRLA+LY LRYE   ++N ++ +K  LA+ G+   + +LLDAL+ + G A+R  GL+  G++M+ + K+ T+++ G ENVY+QH P +++ +    KGK+KD  +P L    A    RP E+IV+I+GG TYEEA K+AE N A+P   V+LGGSCV NS++FL+++     S
Sbjct:    8 DVIASIRFYVDKVVSDPSIGGMKALLLDSATTRIVSMVYSQTQILEKEVYLVEQLGKNHEGMNHLKAALYIQPTEANYELLVRELQAPKFKEYHIFFSNIVPGDMLTRLGRLD-EHDLIMQVHEYYGDYLAINEEFFHLGIENSLVLSSPYSRSLEAAAIYERNVNGVLSVLLSMKRSPSIIRYQGSSELARRLASDISGNIEKESGLFDFRRQEGPLLLILDRRDDPVTPLLTQWTYQAMVHELLGLNNNRVVLRGVPGIAKELEEVVLSPTQDAFFATNRHANFGDLGAAVKSLLEEYQRYAKKNENISSIEDMQAFMERYPDFRSKSINVSKHVAVISELSRLTDVCQLLDISELEQEISCANDHNLHKQELVTRIRNGKVKSADKLRLALLYLLRYE---SYNEVKEIKNLLAEKGLTGQQLSLLDALLAYAGDAKRAAGLFNSGSIMAKMAKTFTNTVHGAENVYTQHQPLLVSTLNELAKGKIKDSVFPPLAAGSAAAAARPSEVIVFIIGGATYEEATKVAEFNNANPTMKVLLGGSCVHNSTSFLKEIGSAFGS 565          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A482SMX5_9ARCH (Sec1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMX5_9ARCH)

HSP 1 Score: 555 bits (1430), Expect = 8.490e-191
Identity = 285/533 (53.47%), Postives = 403/533 (75.61%), Query Frame = 1
Query:   67 MKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAP------FTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTG---RPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638
            MK LLLD  T ++VSMVYSQ+QV+EKEVYL+ELLG + + M HLKAAVF+QPT  +   L RE++ P++ EYH+FF+NVV QD+L +LA  D E E++ Q+QEYYAD+ A+NEDFF   +       S S        F RNVN +LS+LLS+K+ P+QIRY +SS+ AR++A++  + I     FDFRRQDG +L++LDR+DDP+TPLL+QWTYQAMVHELLGL +NR +LRGAPG+ KELEEVVLS TQDDFF ++R+ANFGDLG AVK L+D+YQ+L+K NENI +IEDMQ+FLER+P F+S+S+NVSKHVAV+SEL+RL D   LLD+S++EQE+AC++D++ H++ LL +I +P+++  DK+R+++LY LRYE   +  +R +K  LA+ GV     +LLDA++ + G A+R  GL+ QG +M+ + K+  +S+ GV+NVY+QH P +  +++  L GKLKD  +P L  A  +G   RP E+I+++VGG T+EE+ ++AE NAA+    ++LGGSCV NS++FL+++
Sbjct:    1 MKVLLLDQATKKVVSMVYSQTQVLEKEVYLIELLGVRHESMSHLKAAVFVQPTEANYDLLVRELAEPKYKEYHLFFNNVVPQDMLARLARLD-EQELIMQIQEYYADYQAINEDFFHLGIDNSLILSSASRTLESGQVFERNVNGILSVLLSLKKIPSQIRYQSSSELARRLASDVLTNIEKGEPFDFRRQDGVMLMILDRRDDPITPLLTQWTYQAMVHELLGLNNNRVILRGAPGITKELEEVVLSATQDDFFRRHRFANFGDLGVAVKQLLDDYQKLTKKNENINSIEDMQSFLERYPDFRSKSINVSKHVAVISELSRLTDLCQLLDISEVEQEIACNNDRSTHKQDLLGRIRNPKVKMADKVRMSILYILRYESYDD--LREIKQALAEKGVQVASLSLLDAVLEYAGEAKRAPGLFSQGGIMAKLTKTF-NSVGGVQNVYTQHQPVLFHIMQNILNGKLKDSAFPPLLTAGGSGTNFRPTEVIIFMVGGATFEESTRVAEFNAANNGIKIMLGGSCVQNSTSFLKEI 529          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: F0XW02_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW02_AURAN)

HSP 1 Score: 554 bits (1427), Expect = 6.530e-190
Identity = 312/558 (55.91%), Postives = 401/558 (71.86%), Query Frame = 1
Query:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDR--MPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAP------FTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVR-KELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQG-NLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQ-LTG-RPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638
            MNV+AAV+SYVD+IV D    GMK LLLD  TT+ V+MVYSQ+++++++VYLVE L   ++   M HLKA VF++PT  + A L +EV   +FSEYHVFFSNVV  D L+ LA AD E+EVVRQVQEYYADF  +N + F+ N R+     +          F RNVN LLS LLS+K +P+ IRYA +S+ A+ VAAE +SQIAAD IF F R + P       ++D   PL SQWTYQAMVHELLGL  NR  L+GAPGV+ K+LEEVVLS T D F+A+N++ANFGDLG AVK L+D+YQR +K+NENI +IEDMQ+F+ER+PAF+S+SLNV+KHVA++ EL+RLVD   L+DVSQLEQ++AC+DD++   R +L K+    ++  DKLRLAMLYALRYE         LKL L +  V PDK ALLDAL+ +GG+  RG GL+    +L++   K + SSL+G+ENVY+QHVP +M  ++A  KGKL  + YP+ T A  L G +  ++IVYIVGGVTYEEA K+AELNAA+   SVVLGGS V NS  FLEDL
Sbjct:    5 MNVMAAVRSYVDKIVGDPNCPGMKVLLLDEWTTKTVAMVYSQTEILDRDVYLVERLDQAQNHEVMKHLKACVFVRPTPANFAVLTQEVRRAKFSEYHVFFSNVVPGDALKALAEAD-ENEVVRQVQEYYADFVPVNAELFSLNQRQSLRLSTELRDAFHQDMFARNVNGLLSALLSLKLQPSVIRYAGASRVAKAVAAECASQIAADGIFHFARLESPRF-----EEDAALPLRSQWTYQAMVHELLGLNSNRVKLKGAPGVKDKDLEEVVLSATDDAFYAENKFANFGDLGMAVKDLLDDYQRQTKMNENISSIEDMQSFMERYPAFRSKSLNVTKHVALIGELSRLVDVYKLMDVSQLEQDVACNDDKSAQWREVLAKLNDAAVKAPDKLRLAMLYALRYESAQASTTDRLKLSLEENRVNPDKVALLDALLAYGGKRARGPGLFDSNKSLLAKFSKQVKSSLEGIENVYAQHVPLLMETLDAVAKGKLNAQHYPAATTATPLQGAKHDQVIVYIVGGVTYEEATKVAELNAANAGVSVVLGGSFVHNSGTFLEDL 556          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S3JXK3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXK3_9STRA)

HSP 1 Score: 540 bits (1390), Expect = 2.410e-184
Identity = 294/560 (52.50%), Postives = 410/560 (73.21%), Query Frame = 1
Query:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGA--KRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVR---RGPSQPSGSAPFTR-------NVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYG-QGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAA-SPNFSVVLGGSCVLNSSAFLEDL 1638
            MNVIAA +SYVDRIVSD    GMK LLLD  TT+ VS VYSQ+Q++E++V+LVE L      + M HLKAAVF++PT  ++  LC+E++ P+FSEYHVFF+NV+  ++L++LA AD E E VRQVQE+YAD+ A+NED FT N R   R  +   G    TR       N++A+LS LLS+K +P+ IRY ASS+ AR +A + S ++  D I+ F+ ++  +LL+LDR DDPVTPLLSQWTYQAMVHELLGL +NR  +       K++EEVVLSCTQD FFAK+RY+NFGDLG AVK L+DEYQ  + +NE I TIEDMQ F++R+PAF+SQSLNVSKHV+++SEL RLVD   L++VSQLEQ++AC++D+    R++LEK+A+P+I+  DKLR+A+LY LRYED+ N +   LK  L D  +PP+K  L+DA++ + G+  RG GL+G   ++++ +  S+ +SL+GVENVY+QHVP +  +I+   K KLKD  +P+++      +P ++IV++VGG TYEEA KIAE+N + +    ++LGG+ + NS++FL+DL
Sbjct:    1 MNVIAATRSYVDRIVSDSNNPGMKVLLLDDATTKTVSTVYSQTQILERDVFLVERLEQVDSHEAMRHLKAAVFVRPTWGNIELLCKELAAPKFSEYHVFFANVLPNEMLRRLAEAD-ETESVRQVQEFYADYVAVNEDLFTVNQRSSLRLSNDDRGDTVTTRKNEMIERNISAILSALLSLKTQPSSIRYQASSKIARLIATQCSDRMENDGIYQFKNRN-TMLLILDRADDPVTPLLSQWTYQAMVHELLGLNNNRVKIPVHADSNKKVEEVVLSCTQDSFFAKHRYSNFGDLGGAVKQLLDEYQAQTHMNERISTIEDMQQFVQRYPAFRSQSLNVSKHVSLVSELGRLVDICDLMEVSQLEQDIACNEDRTTQWRSVLEKLANPQIKAPDKLRIALLYCLRYEDSVNLDR--LKAALDDAHLPPEKIILIDAILKYAGKRARGPGLFGAHKSVLAKMTHSLKTSLEGVENVYAQHVPLLSDLIDLITKQKLKDNLFPAVSCVS-AAKPAQLIVFMVGGTTYEEATKIAEINTSPTAGIKILLGGTYIHNSTSFLDDL 555          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A8J2SE02_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE02_9STRA)

HSP 1 Score: 537 bits (1383), Expect = 3.160e-183
Identity = 300/562 (53.38%), Postives = 405/562 (72.06%), Query Frame = 1
Query:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMP--HLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRG----PSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQ------DGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKE--LEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYG-QGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTG-RPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638
            MNV+AA ++YVDRIVSD    GMK LLLD+ TT+ V+ VYSQ+++++++V+LVE L   R   P  HLKAA F++PT  + A L RE+++PRF EYH++F+NV  +  L++LA +D + EVVRQVQE+YADF  +N+  FT N R+      ++P+      RNV+ +LS LL++K +PA IRY+++S  A+ +A E    +AAD IF F+R+       GPLLL+LDR DD VTPLLSQWTYQAMVHELLG+ +NR  L+G    R +  L+EVVLS   D F+A++++ANFGDLG AVK L+D+YQR +KLNENI++I+DMQ+FLER+PAF+S+SLNVSKHVA++SEL+RLV+   L+DVSQLEQELAC DD A  +R +L +I   RI   DKLRLA+LYALRYE   N  +  LKL LA+  V PD+ +L+DAL+ +GGR+ R  GL+G   +L++   K + SSL+G+ENVY+QHVP ++  ++   K +L +  YP +TGA +   RP E++VYI GG TYEEA K+AELNA S    VVLGGS V NS  FLEDL
Sbjct:    1 MNVLAATRAYVDRIVSDPNNPGMKVLLLDAETTKTVANVYSQTEILDRDVFLVERLDQARGHEPMRHLKAAAFVRPTAANFALLRRELADPRFGEYHLYFANVAPRAQLRELAESD-DLEVVRQVQEFYADFVPVNDALFTLNQRQALRLNTTRPTADL-LRRNVDGVLSSLLALKVQPATIRYSSASTVAKAIATEVQRAVAADGIFHFKRRATASDTGGPLLLILDRADDCVTPLLSQWTYQAMVHELLGVNNNRVRLKGTASARGDPNLDEVVLSAAADPFYAQHQHANFGDLGTAVKQLLDDYQRQTKLNENIKSIDDMQSFLERYPAFRSKSLNVSKHVALISELSRLVETHSLMDVSQLEQELACHDDGASQRREVLARIGDGRIGGEDKLRLALLYALRYEQTGN--VEGLKLALAEHRVAPDRVSLVDALLRYGGRSARTAGLFGGDTSLLAKFSKQVKSSLEGIENVYAQHVPLLLETLDLVSKNRLPEARYPCVTGAPVQALRPAEVVVYIAGGATYEEATKVAELNA-SGGIQVVLGGSYVHNSGTFLEDL 557          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S2N3U2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N3U2_9STRA)

HSP 1 Score: 532 bits (1370), Expect = 6.320e-181
Identity = 301/589 (51.10%), Postives = 406/589 (68.93%), Query Frame = 1
Query:    1 MNVIAAVKSYVDRIVS-DGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELL---------------GAK-------RDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRR--GPSQPSGSA-------PFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGP------LLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNE--NIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGN--LMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPN-FSVVLGGSCVLNSSAFLEDL 1638
            M+ +AA++SYVDR+V+ DGR  GMK LLLD++TTQ VS VYSQ++++ +EVYLV  +               G K         +  HLKA  F++PT  +   + +E++NPRF+EYH+FFS +V   LL+ +A  DG  E+VRQVQE+Y DF  +NED  T N R     +  +G+A        + RN+  + SMLL+++R+PA+IRY ASS  A ++A + +  IAAD IF FRR  G       LLLVLDR DDPVTPLLSQWTYQAMVHELLGL +NR VLRGAP + ++LEEVVLS  QD+FF KNR+ANFG+LG ++K L+D+YQ+ ++ +   N+ TIEDMQ F+E+FP  +SQS NVSKHVA++ ELARLVD   L+DVSQ EQELAC+DD   H R LL+K++SP ++  DKLRL +LYALRYE N N  M  +K ++  GGVPP+    +D ++ + G   RG GLYG G+  L+S + KSI +S+QGV NVYSQHVP +M  I++A++GKL  K +P + G+     PQE+IV++ GGVTYEEA KI+E N ++P    V+LGGS V NS++FLE+L
Sbjct:    1 MDGVAAIRSYVDRLVTGDGRCRGMKVLLLDASTTQTVSCVYSQTEILSREVYLVSRIDDGGQNPNIERHDDKGGKPRSEQKDHHQTSHLKAVCFLRPTEINAGLIVKELANPRFAEYHLFFSGIVPSGLLRLIAENDG-RELVRQVQEFYGDFLPVNEDCLTLNCRNTVAMTMSAGTAWARDHAHLYQRNLEGVQSMLLALRRQPARIRYQASSALAGQLARDVADSIAADQIFHFRRGKGGDGYGNLLLLVLDRLDDPVTPLLSQWTYQAMVHELLGLNNNRVVLRGAPNIARDLEEVVLSAQQDEFFRKNRHANFGELGESIKKLLDDYQKQTRTHNVSNLNTIEDMQNFMEKFPELRSQSHNVSKHVAIMGELARLVDVCSLMDVSQFEQELACADDHGAHVRELLDKLSSPSVKIPDKLRLGLLYALRYEKNGNVPM--IKSEMEKGGVPPESIEFVDTILKYAGSKSRGPGLYGVGSKDLVSKMTKSILTSVQGVSNVYSQHVPVLMDTIQSAVRGKLHPKSHPYVLGSSDGPAPQEIIVFMAGGVTYEEATKISEYNNSNPGKVRVILGGSTVHNSTSFLEEL 586          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7R9YAD2_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD2_9STRA)

HSP 1 Score: 530 bits (1366), Expect = 1.030e-180
Identity = 290/557 (52.06%), Postives = 394/557 (70.74%), Query Frame = 1
Query:    4 NVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRR--GPSQPSGSA---PFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFR----RQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLG---LYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638
            ++I A+  YVD+IV+D R+ GMK L+LD  T ++ SMVYSQSQ++EK+VYLVE LGA  + M HLKAAVF+QPT  ++  L RE++ P+++EYH+FFSN+V  D LQ LA AD EH+++RQV EYY DF A+NED F+  +    G S+   +     F R V+ +LS+LLS+KRKP+QIRYAA S  AR+VA E S  I AD +FDFR    R +GPLLL+LDRKDDPVTPLLSQWTYQAMVHE+LGLT NR VL+ APGV+ EL EVVLS TQD FF  +R+AN+GDL  AVK L++E+Q   KLNE+I++IEDMQ FL+R+PAFK+QS  V KH+A+L+EL+R ++   LL+ S+LEQ LAC++D + H   LL K+  P I  G KLRL MLYALRY+   N N+ ++K +L D G+  D+ A++DAL+ + G  +RG     L+G   ++  + +S    L  VENV +QH P + T++E+  KGK+KD+ +PS+ GA    +   +IVY++GG TYEEA  +A +N A       LGG+ V NS +FL+++
Sbjct:    6 SLIDAIGGYVDKIVTDERIGGMKVLVLDDVTKRVCSMVYSQSQILEKQVYLVEQLGAAHESMSHLKAAVFVQPTPYNIELLKRELAEPKYAEYHIFFSNIVKGDALQSLARAD-EHDLIRQVHEYYGDFEAINEDLFSLAMPDSIGLSRADNAIRPESFARTVSGVLSVLLSLKRKPSQIRYAAGSTVARQVANEVSMAIDADDVFDFRSMGRRVEGPLLLILDRKDDPVTPLLSQWTYQAMVHEILGLTHNRVVLKDAPGVKPELHEVVLSPTQDQFFRDHRHANYGDLAIAVKSLLEEFQAQRKLNEDIRSIEDMQRFLDRYPAFKAQSHTVEKHMAILTELSRKMETLRLLECSELEQMLACNNDHSLHLNMLLGKLDDPLIPKGQKLRLGMLYALRYQ--ANGNLAAVKARLEDAGIGHDQIAVIDALLNYAGANRRGPAADDLFGPRGMLGRMTRSFVQGLADVENVLTQHEPLLHTILESVAKGKIKDQSFPSM-GASSGIKHNSVIVYVIGGATYEEAKVVANMNKAMGQTFYYLGGTTVHNSKSFLKEV 558          
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S2C6S3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6S3_9STRA)

HSP 1 Score: 521 bits (1342), Expect = 4.300e-178
Identity = 270/490 (55.10%), Postives = 366/490 (74.69%), Query Frame = 1
Query:  187 MPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGP--SQPSGS----APFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638
            MPHLKAAVF++PT E+VA L RE ++P+F EYH+FFSN++  DLLQ LA +D EHEVV+QVQE+Y DF A+NED F+ N+      S PSG+    A F R    LLS+LLS+K +P+QIRY   SQ A+++A E   +I  D IF F RQ+GP+LL+LDRK DPVTPLLSQWTYQAMVHELLGL +NR VL+GAPGV K++EEVVLS TQD FFA+ R+ANFGDL  ++K L+D++Q+  KLNENI ++EDMQ+F+ER+PAF+SQS NVSKHVA++SEL+RLV+   L+DVSQLEQ+LAC+D+ +   + L+  I +  ++  DKLRLA+LY+LRYE+  N     LK +L DGGV   K  +LD ++ + G+ QR  GLYG  + MS + K++ + L GVENVY+QH P +M  ++AA+KGKL++  YP++ G     +P+ ++V+IVGG TYEE  K+AELNA++P   ++LGG+ + NS +FLE+L
Sbjct:    6 MPHLKAAVFVRPTAENVAILSREFADPQFKEYHLFFSNIISLDLLQALAESD-EHEVVKQVQEFYGDFIAVNEDLFSLNMGDSLRLSAPSGAFDTTAIFDRTAQGLLSVLLSMKVEPSQIRYQGGSQMAQRLAVEVDKRIQGDGIFHFTRQEGPMLLILDRKCDPVTPLLSQWTYQAMVHELLGLNNNRVVLKGAPGVSKDMEEVVLSSTQDTFFAQQRHANFGDLAGSIKELLDDFQKNKKLNENISSVEDMQSFMERYPAFRSQSHNVSKHVALMSELSRLVNHCSLMDVSQLEQDLACNDEHSAQFKELMNSIRAEHVKSADKLRLAILYSLRYEETANI--AQLKRELIDGGVQQHKVDILDVVLRYAGKTQRAPGLYGDRSFMSRMAKNLQTGLNGVENVYTQHQPLMMGTLDAAIKGKLRESAYPAI-GPIPGAQPRSIVVFIVGGATYEEGTKVAELNASNPGVQILLGGNTIHNSVSFLEEL 491          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSG2_9STRA0.000e+0100.00Sec1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
D7FJK3_ECTSI7.520e-24464.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3M2G5_9STRA4.390e-20154.27Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SMX5_9ARCH8.490e-19153.47Sec1 family protein n=1 Tax=archaeon TaxID=1906665... [more]
F0XW02_AURAN6.530e-19055.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3JXK3_9STRA2.410e-18452.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2SE02_9STRA3.160e-18353.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2N3U2_9STRA6.320e-18151.10Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9YAD2_9STRA1.030e-18052.06Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2C6S3_9STRA4.300e-17855.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:164601..168066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349360|estExt_Genemark1.C_Ctg_420022
BRITEko00000,ko00001,ko03016,ko03036,ko04131
KEGG rclassRC00053,RC00209,RC00870
KEGG ReactionR08701
KEGG Pathwayko04138,ko04144,map04138,map04144
KEGG koko:K03495,ko:K12479,ko:K20367
GOsGO:0000011,GO:0000139,GO:0000149,GO:0000325,GO:0001505,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006836,GO:0006873,GO:0006885,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006896,GO:0006897,GO:0006898,GO:0006906,GO:0006907,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007035,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007596,GO:0007599,GO:0008021,GO:0008104,GO:0008150,GO:0009611,GO:0009705,GO:0009987,GO:0010008,GO:0010638,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0016482,GO:0017156,GO:0019725,GO:0019898,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030004,GO:0030133,GO:0030641,GO:0031090,GO:0031201,GO:0031224,GO:0031334,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0031984,GO:0032258,GO:0032501,GO:0032588,GO:0032879,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034058,GO:0034613,GO:0034622,GO:0035542,GO:0035543,GO:0042060,GO:0042592,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045851,GO:0046903,GO:0046907,GO:0048193,GO:0048210,GO:0048227,GO:0048284,GO:0048308,GO:0048489,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050817,GO:0050878,GO:0050896,GO:0051049,GO:0051050,GO:0051082,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055067,GO:0055080,GO:0055082,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098657,GO:0098771,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140029
Preferred nameVPS45
Descriptionvesicle docking involved in exocytosis
COG categoryU
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5158@1|root,KOG1299@2759|Eukaryota
Evalue7.02e-245
Seed ortholog2880.D7FJK3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSec1-like protein
Ec32 orthologEc-04_006430.1
TranscriptId349682
TrackFilteredModels1
ProteinId349360
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349360gene_5618Tribonema minus UTEX_B_3156 geneContig_42 164601..168066 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349360Trimin1|349360|estExt_Genemark1.C_Ctg_420022Tribonema minus UTEX_B_3156 polypeptideContig_42 164647..168066 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5618_4exon_5618_4Tribonema minus UTEX_B_3156 exonContig_42 164601..164913 -
exon_5618_3exon_5618_3Tribonema minus UTEX_B_3156 exonContig_42 165432..165758 -
exon_5618_2exon_5618_2Tribonema minus UTEX_B_3156 exonContig_42 166330..166494 -
exon_5618_1exon_5618_1Tribonema minus UTEX_B_3156 exonContig_42 167137..168066 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_5618UTR3_5618Tribonema minus UTEX_B_3156 three_prime_UTRContig_42 164601..164646 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5618CDS_5618Tribonema minus UTEX_B_3156 CDSContig_42 167137..168066 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5618 ID=mRNA_5618|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1735bp|location=Sequence derived from alignment at Contig_42:164601..168066- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAATGTCATCGCAGCAGTCAAGTCTTATGTCGACCGCATCGTCTCCGA
TGGGAGGCTGGAAGGCATGAAGGCGCTGCTGCTTGACAGCACTACCACTC
AGATAGTGAGCATGGTCTACTCCCAAAGTCAGGTCATGGAGAAGGAAGTC
TACTTGGTAGAGCTGCTGGGAGCAAAGCGAGACCGAATGCCCCACCTCAA
GGCTGCAGTCTTTATACAGCCAACTCTGGAGAGCGTTGCTGCGCTGTGCA
GAGAGGTCTCCAACCCTCGCTTCAGCGAGTACCACGTGTTTTTCTCCAAC
GTGGTGCACCAAGACCTCTTGCAGCAGCTCGCCAGCGCCGATGGGGAGCA
CGAAGTGGTGCGCCAGGTGCAAGAATACTACGCAGACTTCGCGGCCCTCA
ACGAGGACTTCTTCACCGCTAATGTGCGCCGCGGCCCCTCGCAGCCCAGC
GGCAGCGCGCCATTCACCCGCAACGTCAACGCCCTCCTGAGCATGCTGCT
GAGCGTCAAGCGCAAGCCCGCCCAAATCCGTTACGCAGCATCCTCGCAGC
AGGCGCGCAAGGTGGCGGCGGAGGCGTCGTCGCAGATCGCCGCCGACAGC
ATCTTCGACTTCAGGCGGCAGGACGGCCCTCTCCTGCTCGTTCTGGACCG
GAAAGATGACCCCGTCACCCCCCTGCTGAGCCAGTGGACCTATCAGGCGA
TGGTGCACGAGCTGCTGGGACTGACGGACAACCGCTGCGTGCTGCGCGGA
GCTCCCGGCGTGAGGAAGGAGCTGGAGGAGGTGGTGCTCAGCTGCACGCA
GGACGACTTCTTTGCGAAGAACCGGTACGCGAACTTTGGCGACTTGGGCG
CAGCGGTCAAGGGGCTCATGGACGAGTATCAGCGGCTCAGCAAGCTCAAC
GAGAACATCCAGACCATCGAGGACATGCAGGCGTTCCTGGAGCGGTTCCC
CGCGTTCAAGAGCCAGTCGCTGAATGTGAGTAAACACGTGGCAGTGCTCA
GCGAGCTGGCGCGGCTCGTGGACGAGCGCGTGCTGCTGGATGTCAGCCAG
CTGGAGCAGGAGCTGGCGTGCAGCGACGATCAGGCGGGGCACCAGCGCGC
GCTGCTGGAGAAAATAGCCAGCCCGCGCATCCAGCCCGGCGACAAGCTGC
GGCTCGCCATGCTCTACGCGCTGCGCTACGAGGACAACCCCAACTTCAAC
ATGCGGTCATTGAAGTTGAAGTTGGCGGACGGAGGCGTCCCCCCGGACAA
GTCGGCGCTCTTGGACGCGCTGATTGGGTTTGGGGGGAGGGCGCAGCGGG
GGCTTGGGCTGTACGGGCAGGGGAACCTCATGTCCATGATCGGCAAGAGT
ATCACCAGCTCGCTGCAGGGCGTGGAGAACGTCTACTCGCAGCACGTGCC
GTACGTGATGACGGTCATTGAGGCTGCGCTGAAGGGCAAGCTCAAGGACA
AAGAATACCCCTCCCTCACGGGCGCACAGCTCACCGGCAGACCCCAGGAA
ATGATAGTGTACATTGTGGGCGGCGTCACGTATGAAGAAGCAGCCAAGAT
AGCAGAGCTTAATGCGGCCTCCCCCAACTTCTCGGTGGTCCTAGGGGGCA
GCTGCGTGCTCAACTCATCCGCTTTCCTGGAGGACTTGACGCAGCCGCTG
TCATCAAGCATGCAGCCCATGGAGATGGGCTACCGATGACCGGTCCCACT
GTCTACTTGACGTACAATTGAGTTGTTTCGTTGAT
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protein sequence of jgi.p|Trimin1|349360

>Trimin1|349360|estExt_Genemark1.C_Ctg_420022 ID=Trimin1|349360|estExt_Genemark1.C_Ctg_420022|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=563bp
MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEV
YLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSN
VVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPS
GSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADS
IFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRG
APGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLN
ENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQ
LEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFN
MRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKS
ITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQE
MIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPL
SSSMQPMEMGYR*
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mRNA from alignment at Contig_42:164601..168066-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5618 ID=mRNA_5618|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3466bp|location=Sequence derived from alignment at Contig_42:164601..168066- (Tribonema minus UTEX_B_3156 )
ATGAATGTCATCGCAGCAGTCAAGTCTTATGTCGACCGCATCGTCTCCGA TGGGAGGCTGGAAGGCATGAAGGCGCTGCTGCTTGACAGCACTACCACTC AGATAGTGAGCATGGTCTACTCCCAAAGTCAGGTCATGGAGAAGGAAGTC TACTTGGTAGAGCTGCTGGGAGCAAAGCGAGACCGAATGCCCCACCTCAA GGCTGCAGTCTTTATACAGCCAACTCTGGAGAGCGTTGCTGCGCTGTGCA GAGAGGTCTCCAACCCTCGCTTCAGCGAGTACCACGTGTTTTTCTCCAAC GTGGTGCACCAAGACCTCTTGCAGCAGCTCGCCAGCGCCGATGGGGAGCA CGAAGTGGTGCGCCAGGTGCAAGAATACTACGCAGACTTCGCGGCCCTCA ACGAGGACTTCTTCACCGCTAATGTGCGCCGCGGCCCCTCGCAGCCCAGC GGCAGCGCGCCATTCACCCGCAACGTCAACGCCCTCCTGAGCATGCTGCT GAGCGTCAAGCGCAAGCCCGCCCAAATCCGTTACGCAGCATCCTCGCAGC AGGCGCGCAAGGTGGCGGCGGAGGCGTCGTCGCAGATCGCCGCCGACAGC ATCTTCGACTTCAGGCGGCAGGACGGCCCTCTCCTGCTCGTTCTGGACCG GAAAGATGACCCCGTCACCCCCCTGCTGAGCCAGTGGACCTATCAGGCGA TGGTGCACGAGCTGCTGGGACTGACGGACAACCGCTGCGTGCTGCGCGGA GCTCCCGGCGTGAGGAAGGAGCTGGAGGAGGTGGTGCTCAGCTGCACGCA GGACGACTTCTTTGCGAAGAACCGGTACGCGAACTTTGGCGACTTGGGCG CAGCGGTCAAGGGGCTCATGGACGAGTATCAGCGGCTCAGCAAGCTCAAC GAGAACATCCAGACCATCGAGGACATGCAGGTGACGCTTCGCCGTGAACA GCGGCTGCGTGTGTAGCATGAGTGACATGCTTGCGAACCTCTGTGCAGTT GAAGTTGACGCACATTGAATGACTTCCCGTGTGGTAAATGTGATAATGAT GGGACTCTTGCGTGGGTCACGTGCATGGCTGACACACTATGGGAGAAGCT GTAGATGCAGCCTAGCCTGCTGCATGCCATTTCTCCGCTCTATGTGTGCC GCATACCATATCACCAGCTTTTGTGCACTCTCTTCGTCTACTGTTTACAT GTGCGTCAACACAGACCGCTCATCACAGCGGTGCTTGGCAAGTGCGGCCC GTGCTTTCAGCATTGCTTTGCAACATCAGACAAGCTGCAGTACACAAAAG TTCAGTAGCGTGGTGTACCATCACTCAATGGTCCCCCAAGCTCATGGGTG TTGACCACTGAAGCATCAGTGTCCCTAAATTGCTAGTTGAGCCACAGCAA CACACTGCCATGCTGCCAGTACTCCGAATCTGATTGCTGACTGCAGCACT TTCGGTGCTCCTGTTGCAGCAGGCTGCGGCACCGCAGCGCCGCAACCAGC AGCTCAGAACATAATCAAAATTGCAACCGTCGTTTTCTGCATCACTGGCA CCCTGTCGACCCCCTTCCGCAGGCGTTCCTGGAGCGGTTCCCCGCGTTCA AGAGCCAGTCGCTGAATGTGAGTAAACACGTGGCAGTGCTCAGCGAGCTG GCGCGGCTCGTGGACGAGCGCGTGCTGCTGGATGTCAGCCAGCTGGAGCA GGAGCTGGCGTGCAGCGACGATCAGGCGGGGCACCAGGTGATTGAGCGTA CCTATGTGGTAATGGTGAAGTTGAAGTGATACTGATGCTTCAAGTGGTAA TCGCGATACTCCTGAAGTAGTGGCTATGATGCATGAGTGCGTCACTACGC AAAGCGTATATGCAGCGCATCCGGCGGGTTTTGAGCAATGCAGCTTCAGT CAAGGACTGCGTAGTGCAGACTGAGCAGGTATGATGTTGATGGCACATGG GATAAAGGTTGCTCGTAGGTACTGCGGTGGTGTATCTCAGGGCTAACCCC GCTAGTGATGATTATGCAATGCCTGGAATCGACTAGGGACAGTGTTAGGT GCGCATTATGCATGATCAGGCACTGTCATTGCATGGCCCATTGTTGTCAG CGGACACAATGCCGTAGCCTAGCGACGGCCATCGTTGAGCCCTTAGCTCT GGCGAGCAAGTGCGCAAAGCGCCGCTTTCAGGATCTGCCCACACGTTCGT GATCCACTGCACTACAAACAAACCCATGCCATCCATTGATTGAATTCACT GGGGTCATGCCCATTGAGCGCTGCTGCTGAAATGCGATTCATTCCACTGC CGGCGCAGCGCGCGCTGCTGGAGAAAATAGCCAGCCCGCGCATCCAGCCC GGCGACAAGCTGCGGCTCGCCATGCTCTACGCGCTGCGCTACGAGGACAA CCCCAACTTCAACATGCGGTCATTGAAGTTGAAGTTGGCGGACGGAGGCG TCCCCCCGGACAAGTCGGCGCTCTTGGACGCGCTGATTGGGTTTGGGGGG AGGGCGCAGCGGGGGCTTGGGCTGTACGGGCAGGGGAACCTCATGTCCAT GATCGGCAAGAGTATCACCAGCTCGCTGCAGGGCGTGGAGAACGTCTACT CGCAGCACGTGCCGTACGTGATGACGGTCATTGAGGTGAGAGACGCGCTG AGCGTTGTGGATACTGTCATCATTGTCACAGTGTCATGTGGTGCCTCCGC TGCTGTTGGCATGGCCAGATGTGCCTGGATGGTGATGGCGAGCAACCGCG ACGTGCGCTGGCCACTGGGCATGTTGCTGTACGGTGCGTGCTGAACGGTC AGGGTCGGAGTCAGAATCAGAGTCAGAGGTGTGACTCTGAGCGGCCAGGT TGATACCCGTAGCAGAGTCCTCAGCATGCACTAGCACACCAGTGCTACCT TGTTACAGTTGTAAGTTTGTTGCTTACCAGAGCAGCAACGATGTCAGTTT ATCAGTGTGCAAACACCAATACTCGCTCATCACCACTGAGCCTGGGCTGC AGGACAGGACTCGCCTTACTGTGTAGCTGCTGCATGCTCATCATACTCGC TGTCTGCATAAGTGCTTCACTGCATAATCGACGCGCACGATGCTCCAGTG CGCCTAAATGAGATCATTTATGATCCATCTCGCTGCTTTGTCCGTGCTTG CAGGCTGCGCTGAAGGGCAAGCTCAAGGACAAAGAATACCCCTCCCTCAC GGGCGCACAGCTCACCGGCAGACCCCAGGAAATGATAGTGTACATTGTGG GCGGCGTCACGTATGAAGAAGCAGCCAAGATAGCAGAGCTTAATGCGGCC TCCCCCAACTTCTCGGTGGTCCTAGGGGGCAGCTGCGTGCTCAACTCATC CGCTTTCCTGGAGGACTTGACGCAGCCGCTGTCATCAAGCATGCAGCCCA TGGAGATGGGCTACCGATGACCGGTCCCACTGTCTACTTGACGTACAATT GAGTTGTTTCGTTGAT
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Coding sequence (CDS) from alignment at Contig_42:164601..168066-

>mRNA_5618 ID=mRNA_5618|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1689bp|location=Sequence derived from alignment at Contig_42:164601..168066- (Tribonema minus UTEX_B_3156 )
ATGAATGTCATCGCAGCAGTCAAGTCTTATGTCGACCGCATCGTCTCCGA
TGGGAGGCTGGAAGGCATGAAGGCGCTGCTGCTTGACAGCACTACCACTC
AGATAGTGAGCATGGTCTACTCCCAAAGTCAGGTCATGGAGAAGGAAGTC
TACTTGGTAGAGCTGCTGGGAGCAAAGCGAGACCGAATGCCCCACCTCAA
GGCTGCAGTCTTTATACAGCCAACTCTGGAGAGCGTTGCTGCGCTGTGCA
GAGAGGTCTCCAACCCTCGCTTCAGCGAGTACCACGTGTTTTTCTCCAAC
GTGGTGCACCAAGACCTCTTGCAGCAGCTCGCCAGCGCCGATGGGGAGCA
CGAAGTGGTGCGCCAGGTGCAAGAATACTACGCAGACTTCGCGGCCCTCA
ACGAGGACTTCTTCACCGCTAATGTGCGCCGCGGCCCCTCGCAGCCCAGC
GGCAGCGCGCCATTCACCCGCAACGTCAACGCCCTCCTGAGCATGCTGCT
GAGCGTCAAGCGCAAGCCCGCCCAAATCCGTTACGCAGCATCCTCGCAGC
AGGCGCGCAAGGTGGCGGCGGAGGCGTCGTCGCAGATCGCCGCCGACAGC
ATCTTCGACTTCAGGCGGCAGGACGGCCCTCTCCTGCTCGTTCTGGACCG
GAAAGATGACCCCGTCACCCCCCTGCTGAGCCAGTGGACCTATCAGGCGA
TGGTGCACGAGCTGCTGGGACTGACGGACAACCGCTGCGTGCTGCGCGGA
GCTCCCGGCGTGAGGAAGGAGCTGGAGGAGGTGGTGCTCAGCTGCACGCA
GGACGACTTCTTTGCGAAGAACCGGTACGCGAACTTTGGCGACTTGGGCG
CAGCGGTCAAGGGGCTCATGGACGAGTATCAGCGGCTCAGCAAGCTCAAC
GAGAACATCCAGACCATCGAGGACATGCAGGCGTTCCTGGAGCGGTTCCC
CGCGTTCAAGAGCCAGTCGCTGAATGTGAGTAAACACGTGGCAGTGCTCA
GCGAGCTGGCGCGGCTCGTGGACGAGCGCGTGCTGCTGGATGTCAGCCAG
CTGGAGCAGGAGCTGGCGTGCAGCGACGATCAGGCGGGGCACCAGCGCGC
GCTGCTGGAGAAAATAGCCAGCCCGCGCATCCAGCCCGGCGACAAGCTGC
GGCTCGCCATGCTCTACGCGCTGCGCTACGAGGACAACCCCAACTTCAAC
ATGCGGTCATTGAAGTTGAAGTTGGCGGACGGAGGCGTCCCCCCGGACAA
GTCGGCGCTCTTGGACGCGCTGATTGGGTTTGGGGGGAGGGCGCAGCGGG
GGCTTGGGCTGTACGGGCAGGGGAACCTCATGTCCATGATCGGCAAGAGT
ATCACCAGCTCGCTGCAGGGCGTGGAGAACGTCTACTCGCAGCACGTGCC
GTACGTGATGACGGTCATTGAGGCTGCGCTGAAGGGCAAGCTCAAGGACA
AAGAATACCCCTCCCTCACGGGCGCACAGCTCACCGGCAGACCCCAGGAA
ATGATAGTGTACATTGTGGGCGGCGTCACGTATGAAGAAGCAGCCAAGAT
AGCAGAGCTTAATGCGGCCTCCCCCAACTTCTCGGTGGTCCTAGGGGGCA
GCTGCGTGCTCAACTCATCCGCTTTCCTGGAGGACTTGACGCAGCCGCTG
TCATCAAGCATGCAGCCCATGGAGATGGGCTACCGATGA
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