mRNA_5446 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348761
Unique NamemRNA_5446
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835YWP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP9_9STRA)

HSP 1 Score: 524 bits (1349), Expect = 1.190e-186
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1 
Query:    1 MAAAAXXXXXXXXXXXQTAASAVRCDGGEERGQLAEREIGDISLRAQLQMAVYGTEQQFAHWHFGARRDLSACFAHLRTLRTVPRVWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRITAATQQQGSGSTGR 843
            MAAAAXXXXXXXXXXXQTAASAVRCDGGEERGQLAEREIGDISLRAQLQMAVYGTEQQFAHWHFGARRDLSACFAHLRTLRTVPRVWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRITAATQQQGSGSTGR
Sbjct:    1 MAAAAXXXXXXXXXXXQTAASAVRCDGGEERGQLAEREIGDISLRAQLQMAVYGTEQQFAHWHFGARRDLSACFAHLRTLRTVPRVWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRITAATQQQGSGSTGR 281
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A836CA09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA09_9STRA)

HSP 1 Score: 365 bits (936), Expect = 4.690e-125
Identity = 190/199 (95.48%), Postives = 192/199 (96.48%), Query Frame = 1 
Query:  247 VPRVWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRITAATQQQGSGSTGR 843
            VPRVWRVINKPLEKKQVSSHSGANAA NGALHVTIPAPLELH+ MIVILFILRRLRAVIFKNDPAHVLM LPGNKSVQVHIDNYTDFINELG LHLAL+RYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSML GADMTYDKMCDFSAQAKRGRITAA QQQGSG TGR
Sbjct:    2 VPRVWRVINKPLEKKQVSSHSGANAA-NGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTGR 199
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835YLW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW9_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.300e-106
Identity = 174/202 (86.14%), Postives = 182/202 (90.10%), Query Frame = 1 
Query:  262 RVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRG-RIT--AATQQQGSGSTGR*KSVA 858
            +VINKPLEKKQVSSHSGANAA NGALHVTIPAPLELH+ MIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQ HIDNYTDFINELG LHLAL+RYGIYSFRNATATAICTAAKMQEEQGHHQLA+TTLARGAQLLDTSIARFVTAYNQDAGRDLSML GADMTYDKMCDFSAQ  RG R+   AA    G G   R +++A
Sbjct:   35 KVINKPLEKKQVSSHSGANAA-NGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQAHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLASTTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQVTRGTRVAQPAAASAPGGGYMARTEALA 235
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835YKA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA5_9STRA)

HSP 1 Score: 324 bits (831), Expect = 1.620e-106
Identity = 189/302 (62.58%), Postives = 200/302 (66.23%), Query Frame = 1 
Query:  163 TEQQFAHWHFGARRDLSACFAHLRTLRTVPRVWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQ-------------LLDTSIAR---FVTAYNQD------------AGRDLSMLPGADMTYDKMCD-----------------------------------------------FSAQAKRGRITAATQQQGSGSTGR 843
            +EQQFAHWHFGARRDLSACFAHLRTLRTVPRVWRVIN PLEKKQVSSHSGANAAINGALHVTIPAPLELH+PMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINEL RL LAL+RYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQ             +     AR    VTA  Q               +    +  A   +++M +                                                + QAKRGRITAATQQQGSG TGR
Sbjct:   73 SEQQFAHWHFGARRDLSACFAHLRTLRTVPRVWRVINNPLEKKQVSSHSGANAAINGALHVTIPAPLELHRPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELRRLQLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQQQLWHMQQQYFDQMQRADAARTEALVTALQQQYVVQMQQWQAWQQAQQQRQIQNAQYMFERMQNTEHVRMQAMMTFQDNLVNRLLGPPAMHRQVSIEGGVNVGSRRTAPPILAPQAKRGRITAATQQQGSGGTGR 374
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A836CI82_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI82_9STRA)

HSP 1 Score: 293 bits (749), Expect = 2.690e-97
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 1 
Query:  379 MIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRITAATQQQGSGSTGR 843
            MIVILFILRRLRAVIFKNDP HVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGR+LSMLPGADMTYDKMC+FSAQAKRGRITAA QQQGSG TGR
Sbjct:    1 MIVILFILRRLRAVIFKNDPTHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRNLSMLPGADMTYDKMCNFSAQAKRGRITAAPQQQGSGGTGR 155
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835YJE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJE7_9STRA)

HSP 1 Score: 251 bits (640), Expect = 7.410e-72
Identity = 133/187 (71.12%), Postives = 153/187 (81.82%), Query Frame = 1 
Query:  262 RVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRI--TAATQ 816
            +VINKPLEKKQVS HSGANAA NGALHVTI AP ELH+ +IVILFILRRLRA++F  +PA VL+GLPGN S QV+   YTDFINE+GRLHLA+DRYG++S RNATATAICT A++QE QG HQLAATT ARGA++LDTS+ARF TAY+Q A RDLSMLP ADMTY  M +FS    +G    TA TQ
Sbjct:  830 QVINKPLEKKQVSCHSGANAANNGALHVTICAPKELHEAIIVILFILRRLRAIMFNEEPADVLIGLPGNGSAQVNSRCYTDFINEIGRLHLAIDRYGVFSMRNATATAICTTARIQEAQGQHQLAATTRARGARMLDTSLARFETAYDQSASRDLSMLPSADMTYIVMQEFSMSIAQGTRAPTAVTQ 1016
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835Z4W1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W1_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.400e-35
Identity = 84/189 (44.44%), Postives = 114/189 (60.32%), Query Frame = 1 
Query:  250 PRVW---RVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRITA 807
            P+ W   +VI++PL+KKQ SSH+G NA  NG L VTIP P ELH  + ++LF+ RRLRA+IF  +   +L GL G    QV    + D +N+LGR+HL + R+G YS RNA+ TA    A   E+ G HQLAAT + R  Q +D+S    +T YNQ AGRD  ++  A  T  +M  F+ +   G   A
Sbjct:  932 PKGWVIEQVIDEPLDKKQASSHTGKNAVANGNLQVTIPCPPELHDVVCMVLFVCRRLRALIFGKEAPDLLNGLSG-LGHQVDEGTFGDLMNDLGRIHLRISRWGHYSLRNASVTAAFALAGALEDIGQHQLAATVVTRYCQAVDSSTVAGMTNYNQQAGRDTQLMAPATNTPAEMAAFAQRLATGSAAA 1119
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BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835Z092_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z092_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.630e-31
Identity = 77/168 (45.83%), Postives = 107/168 (63.69%), Query Frame = 1 
Query:  256 VWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTD--FINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMT 753
            + +VI  PLE+KQ SSH+G ++  NG L V I AP ELH+ + +ILF+ RRLRA+IF+ +P  +L GL G    Q     Y +  FI+ +GR+HLA+  +G YS RNA+ TA+   A+  E  G H L  T L R AQ   +S ARFV++Y+Q AG++   +P ADMT
Sbjct:  908 IRQVIENPLEQKQASSHAGKSSVGNGPLPVDIVAPPELHEVICLILFVCRRLRAIIFEMEPPDLLTGLSGASGDQADCTTYANLKFISRIGRIHLAIPFFGHYSMRNASITAVMDMARDMEVGGLHGLKETLLNRAAQTWHSSRARFVSSYDQHAGQNTRHMPRADMT 1075
[Close]
BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835YRL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.150e-16
Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = 1 
Query:  268 INKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDA 714
            +++P+ KK  +SH        G L + IP P  L   ++V+LFILRRLRAV+ K +P   ++GL G    QV    +TD + E+G  HL +   G+Y FR+ T T I   ++    Q  H+ A T    GA+ L TS+A    AY+ +A
Sbjct:  829 MDRPMAKK--TSHIRGRGEA-GPLQIAIPVPKALADVLVVMLFILRRLRAVLHKAEPDDRVLGLSGANGKQVGKKTFTDAVAEIGAYHLGVPSLGVYVFRHETITTIMDLSRYLRSQNEHKAADTVEQDGARQLGTSVAAMRLAYDNNA 974
[Close]
BLAST of jgi.p|Trimin1|348761 vs. uniprot
Match: A0A835Z433_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z433_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.060e-9
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:  256 VWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQ 480
            + +VI  PLE+KQ SSH+G ++  NG L V I AP ELH+ + +ILF+ RRLRA+IF+ +P  +L GL  N  +Q
Sbjct:  853 IRQVIENPLEQKQASSHAGKSSVGNGPLPVDIVAPPELHEVICLILFVCRRLRAIIFEMEPPDLLTGLSLNHQLQ 927
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348761 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YWP9_9STRA1.190e-186100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CA09_9STRA4.690e-12595.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLW9_9STRA1.300e-10686.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKA5_9STRA1.620e-10662.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI82_9STRA2.690e-9796.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJE7_9STRA7.410e-7271.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4W1_9STRA4.400e-3544.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z092_9STRA1.630e-3145.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRL5_9STRA6.150e-1636.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z433_9STRA1.060e-949.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_30contigContig_30:1093304..1097236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348761|estExt_Genemark1.C_Ctg_300146
Hectar predicted targeting categorysignal peptide
TranscriptId349083
TrackFilteredModels1
ProteinId348761
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348761gene_5446Tribonema minus UTEX_B_3156 geneContig_30 1093304..1097236 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348761Trimin1|348761|estExt_Genemark1.C_Ctg_300146Tribonema minus UTEX_B_3156 polypeptideContig_30 1093304..1097121 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5446_1exon_5446_1Tribonema minus UTEX_B_3156 exonContig_30 1093304..1093374 +
exon_5446_2exon_5446_2Tribonema minus UTEX_B_3156 exonContig_30 1094346..1094440 +
exon_5446_3exon_5446_3Tribonema minus UTEX_B_3156 exonContig_30 1094877..1094974 +
exon_5446_4exon_5446_4Tribonema minus UTEX_B_3156 exonContig_30 1096096..1096614 +
exon_5446_5exon_5446_5Tribonema minus UTEX_B_3156 exonContig_30 1097059..1097236 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5446CDS_5446Tribonema minus UTEX_B_3156 CDSContig_30 1093304..1093374 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_5446UTR3_5446Tribonema minus UTEX_B_3156 three_prime_UTRContig_30 1097122..1097236 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5446 ID=mRNA_5446|Name=jgi.p|Trimin1|348761|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=961bp|location=Sequence derived from alignment at Contig_30:1093304..1097236+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGCTGCTGCTGCTGCCATGGCTGCTGCTGCTGCTGCTGCCACGCA
AACTGCTGCAAGTGCTGTCAGGTGTGACGGCGGTGAGGAGCGCGGTCAGC
TCGCCGAACGCGAAATCGGCGACATCAGCCTGAGAGCCCAACTCCAGATG
GCGGTGTACGGGACAGAGCAGCAGTTTGCGCACTGGCACTTCGGAGCGCG
CCGCGACCTCAGTGCCTGCTTCGCGCATTTGCGCACGCTGCGGACGGTTC
CGCGCGTGTGGCGTGTCATCAATAAGCCCCTGGAAAAGAAGCAGGTCTCC
TCTCACAGCGGCGCCAACGCCGCCATCAACGGTGCACTGCACGTGACGAT
ACCAGCGCCATTGGAGCTCCACCAGCCCATGATTGTCATCCTCTTCATCC
TCCGCAGGCTCCGTGCGGTCATCTTCAAGAACGATCCCGCGCATGTCCTG
ATGGGCCTCCCTGGAAACAAGAGCGTGCAGGTCCACATCGACAATTACAC
CGACTTCATCAACGAGCTCGGCCGCCTTCACCTAGCGCTCGACCGGTACG
GCATCTACTCATTCAGGAATGCTACCGCCACTGCGATCTGCACAGCAGCA
AAGATGCAAGAGGAGCAGGGCCACCATCAGCTTGCGGCCACGACACTCGC
ACGCGGCGCACAGCTGCTCGACACGAGCATCGCCAGATTCGTCACTGCGT
ACAACCAAGACGCAGGACGCGACCTATCCATGCTGCCTGGAGCGGACATG
ACGTACGACAAGATGTGCGACTTCTCAGCGCAGGCCAAGCGCGGCCGCAT
CACTGCCGCAACGCAGCAGCAGGGCTCAGGGAGTACAGGGCGCTAAAAGA
GCGTCGCAGGGCACGCAAAGAGACTGACTCAGATGTGGAGGAGGTAGCGC
CCAAGCACATGCGGTGTGAGCAGGCAACCACTAAGTTGGCTAGGACGTCC
GTCGGGTGGTG
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protein sequence of jgi.p|Trimin1|348761

>Trimin1|348761|estExt_Genemark1.C_Ctg_300146 ID=Trimin1|348761|estExt_Genemark1.C_Ctg_300146|Name=jgi.p|Trimin1|348761|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=282bp
MAAAAAAMAAAAAAATQTAASAVRCDGGEERGQLAEREIGDISLRAQLQM
AVYGTEQQFAHWHFGARRDLSACFAHLRTLRTVPRVWRVINKPLEKKQVS
SHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVL
MGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAA
KMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADM
TYDKMCDFSAQAKRGRITAATQQQGSGSTGR*
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mRNA from alignment at Contig_30:1093304..1097236+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5446 ID=mRNA_5446|Name=jgi.p|Trimin1|348761|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3933bp|location=Sequence derived from alignment at Contig_30:1093304..1097236+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCTGCTGCTGCTGCCATGGCTGCTGCTGCTGCTGCTGCCACGCA
AACTGCTGCAAGTGCTGTCAGGTGCCGACGGTGCTCGCTGTCTTGCGGCA
GCCAGTAGTGGACTCGGCCACAAGCAGCGACACACCGTCTGGGGTCTGTG
TTTGTGATCACTCGATTTCAGTCGATGTACATCGACCAAAATCGGTGATT
TCTTTCTTTGTGCTGGCTTGCCCACTCTGAGGCAGCAGCAGCGCAATACA
CCTGACTAGCACTAGAATGCTGCAGGTTTTCTGTTGTGTTCTTCTTAGGC
AAGCCATCCTTTGGTGGCTCTACTTGCTCCTGGCTAGCAAGATCACATCA
CTTGGTTCCGACACCTCGAGCGGATTTCGACTGTGCTGGTGGCACCAGCA
CATCCAAACAGTCATGGTCCCAGCAGGTCAGGAGCAGGATGATTGCGCCA
GCTACGAGCTCGTTGATAGGCTTCCGAAGCCTGCTCCTAGTGGCGTTCGC
GTCGCCAGGGAGCATCAACAGCAGGCGCAGCAGCAGGAGTGAGCTCCGTC
AAGCACCAACTCTGCAAAAGCCGCAGACCCGCCTCTGGGTGGGAGCGCAC
CTGCGTATGGCGGCGTCGTAACAGCCTATGCGGACAGGCCGGCTGGCACA
GAACTGGTCGGCACTGAGGCCAATGATTCCCCAGTCCAGGAATCAGCTGC
TGTCAATCAGAGAGAGGCCTCTTGGCCTGCGTCCAACCCTTTGGCAGAGC
TCATGGTAGACGAGCTGGCGCGGCGGGGGGATCCGCATGCAGCTCCATTC
AGGCATGAACACAACCAAGCCCCATGCGCCACTGCTGCTCGAAAGGTAGC
ACCTCCATCGGACATAGCATCAATCCCCACTGCACCGCGCGGTACTCGCG
AACACGGCAGCGCCGCTATTTTTGAAGGGGGGAAAGGGGCAGCTACAGGC
TGCAGACACAGCCGCAGCGCCGACGGAGCAGTACACAGAGCTGAGGACAG
GCTTGCTGCATTGGAGGCAGCTCACATTCGCGCCCTGAACAGGTGTGACG
GCGGTGAGGAGCGCGGTCAGCTCGCCGAACGCGAAATCGGCGACATCAGC
CTGAGAGCCCAACTCCAGATGGCGGTGTACGGGACAGGTCGTCTCAAGTA
CGAGCGCCACAGGCAGCTACCATACAGCAGCCATCCCTCACAGTCTGTGC
AACGAGCGGATGCGACTTTGGCGCAGTCAGCAACAGCACTGCTACGGAGC
AGTGCGCCGCAGCATGAGACACTGGCGCCGCCATGGCGCTATCTTTGGCG
GAGACCCCGACTTGCATTAGCGTGTTTTGCGCAAACGCGGTTCCTTGGTA
GCCCATGTGCTCGGAGGATGTCACCATCCCAGGAGGGGGAAGGGTTTGTT
GCAGCCGCTGCAGATGGTTCCCTGGCATGCGCTTAAGACAGTTCCGCGCG
CACTGCAGACGGTCCCATTCGCGCTGTGCGGACCGCGCCTTTGTGTGCAC
CGCACGTTTTCAGCGCAGCACATCGCGCAATACGGACGGTTCCGCATGCT
CCGCACGTGCCGCGCATTTTCAGAGCAGCAGTTTGCGCACTGGCACTTCG
GAGCGCGCCGCGACCTCAGTGCCTGCTTCGCGCATTTGCGCACGCTGCGG
ACGGTTCCGCGCGTGTGGCGTGTACGGCAGCCGCGCATGCAATTCTTCAG
CGCAGCACTTGGCGCACTGTAGGTGGTTCTGCGGACGGTTTCGCACGCAC
CGCTCAGCTTGCCATGCATTCTCAGTGCAGCACTTCGCGCACTGGCGTGG
TGCTACGGCGGATCCATTGCTGCCTACTATAGAGATCTGACCTCGATCTA
CCAGTAGCCCAGGCCAAACCGCTTAAGGCCGGGCTGCTCCCGGCCACGAC
CGCCAGCCGCACTCCGACTACGCGCCCCAGCGCTCAGCGCCCCACTCTCT
GCGTTGGCCGTGTTGGCCTGACGCTACTCTGTGTATGTTGGCCGCATCGG
CCTGACGCTACTCTTATATCCGTACACCGTATAATTTTAACGTATATGCG
TATATATCGGCGTATATCCGTATATGAGGACGTACAAGGGGCGCTAAAAG
GCCATGAACATGCAGCTGAATATGGCAGGTGACTAAGTATACCATATCAC
AATGATTGCTCTGATCATCAACAGCGACCAGCCATACACAAAGTCACGCA
TGTGTACAACATCATGAACACAGTCACATGCACTGCCACCGATGCAGAAC
TGATCGTGCTTGCACCTACGCACTCAGCAATAGCTTGCATGTTCAAGAGA
TAAGTGTCGTTCAGCGCAATGTGCCTGACAAGGTTGTGTGCAGTAAAAGC
TCGTGATATATGAGCACATCAAGCGCACTGTAGTCTACCATATACACGGT
TCAATCTCTAGACATATGAGCATCTGACAGTCTAAGTTCAGCGCTTTGTA
CAGCATGACTCTCATTGTATCATATGTGCGACCGTACAAGCTTTGCAGCG
CTGCTGTCATAGTATAACATTGCAGGATGTACACCCTTTTGATACATGAT
CATCTGCCCCTGTAACGCTGGCTTGTGACACAATGATACCACCACAGCCT
ACCAGACTGACCTTTGCGTGCATCAGATGCACCTGAACTGTAGTACTGTA
CTAGACGCGCTTTGCAGTGTTGCACATGCCGTGAGTATTAATAGCACCAG
AGTATCATGCGGCCTGCAGGCACAGTGACAAAATGTACCTTACAGCATAA
AATGATTACACAAGCCAAACGAACCCACCTCCTATTGTGCAGGTCATCAA
TAAGCCCCTGGAAAAGAAGCAGGTCTCCTCTCACAGCGGCGCCAACGCCG
CCATCAACGGTGCACTGCACGTGACGATACCAGCGCCATTGGAGCTCCAC
CAGCCCATGATTGTCATCCTCTTCATCCTCCGCAGGCTCCGTGCGGTCAT
CTTCAAGAACGATCCCGCGCATGTCCTGATGGGCCTCCCTGGAAACAAGA
GCGTGCAGGTCCACATCGACAATTACACCGACTTCATCAACGAGCTCGGC
CGCCTTCACCTAGCGCTCGACCGGTACGGCATCTACTCATTCAGGAATGC
TACCGCCACTGCGATCTGCACAGCAGCAAAGATGCAAGAGGAGCAGGGCC
ACCATCAGCTTGCGGCCACGACACTCGCACGCGGCGCACAGCTGCTCGAC
ACGAGCATCGCCAGATTCGTCACTGCGTACAACCAAGACGCAGGACGCGA
CCTATCCATGCTGCCTGGAGCGGACATGACGTACGACAAGATGTGCGACT
TCTCAGCGCAGGTCGCGCGAGGCACGCGTGTGGCCCAGCCGGCAGCGGCA
TCAGCGCCAGGCGGCGGATACATGGGTGAGGCACCCCTGTCAGTACCACC
GGTCACACAGCAGCAGCTGTGGCACATGCAGCAGCAGTACTTTGACCAGA
TGCAACGTGCTGATGCAGCGCGCACGGAGGCCCTCGCCACAGCCTTGCAG
CAGCAGTACGTAGTGCAAATGCAACAGTGGCAGGCGTGGCAGCAGGCACA
GCAGCAGCAACAGATGCAGAATGCACAGTACATGTTCGAGCGCATGCAGA
ACACAGAACATGTGCGCATGCAGGCCATGATGACATTTCAAGACAATCTC
GTCAACCGCCTACTGGGTCCGCCTGCGATGCACAGGCAGGTGTCAATTGA
GGGGGGGGTTAATGTTGGCGGCAGGCGCACGGCACCGCCCATTCTGGCTC
CTCAGGCCAAGCGCGGCCGCATCACTGCCGCAACGCAGCAGCAGGGCTCA
GGGAGTACAGGGCGCTAAAAGAGCGTCGCAGGGCACGCAAAGAGACTGAC
TCAGATGTGGAGGAGGTAGCGCCCAAGCACATGCGGTGTGAGCAGGCAAC
CACTAAGTTGGCTAGGACGTCCGTCGGGTGGTG
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Coding sequence (CDS) from alignment at Contig_30:1093304..1097236+

>mRNA_5446 ID=mRNA_5446|Name=jgi.p|Trimin1|348761|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=846bp|location=Sequence derived from alignment at Contig_30:1093304..1097236+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCTGCTGCTGCTGCCATGGCTGCTGCTGCTGCTGCTGCCACGCA
AACTGCTGCAAGTGCTGTCAGGTGTGACGGCGGTGAGGAGCGCGGTCAGC
TCGCCGAACGCGAAATCGGCGACATCAGCCTGAGAGCCCAACTCCAGATG
GCGGTGTACGGGACAGAGCAGCAGTTTGCGCACTGGCACTTCGGAGCGCG
CCGCGACCTCAGTGCCTGCTTCGCGCATTTGCGCACGCTGCGGACGGTTC
CGCGCGTGTGGCGTGTCATCAATAAGCCCCTGGAAAAGAAGCAGGTCTCC
TCTCACAGCGGCGCCAACGCCGCCATCAACGGTGCACTGCACGTGACGAT
ACCAGCGCCATTGGAGCTCCACCAGCCCATGATTGTCATCCTCTTCATCC
TCCGCAGGCTCCGTGCGGTCATCTTCAAGAACGATCCCGCGCATGTCCTG
ATGGGCCTCCCTGGAAACAAGAGCGTGCAGGTCCACATCGACAATTACAC
CGACTTCATCAACGAGCTCGGCCGCCTTCACCTAGCGCTCGACCGGTACG
GCATCTACTCATTCAGGAATGCTACCGCCACTGCGATCTGCACAGCAGCA
AAGATGCAAGAGGAGCAGGGCCACCATCAGCTTGCGGCCACGACACTCGC
ACGCGGCGCACAGCTGCTCGACACGAGCATCGCCAGATTCGTCACTGCGT
ACAACCAAGACGCAGGACGCGACCTATCCATGCTGCCTGGAGCGGACATG
ACGTACGACAAGATGTGCGACTTCTCAGCGCAGGCCAAGCGCGGCCGCAT
CACTGCCGCAACGCAGCAGCAGGGCTCAGGGAGTACAGGGCGCTAA
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