mRNA_5347 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164164
Unique NamemRNA_5347
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A836CG95_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG95_9STRA)

HSP 1 Score: 593 bits (1528), Expect = 4.650e-214
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1 
Query:    1 MELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQVHAVAVCVLLVVHCEFT 891
            MELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQVHAVAVCVLLVVHCEFT
Sbjct:    1 MELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQVHAVAVCVLLVVHCEFT 297
[Close]
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: D7FM32_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM32_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 2.570e-135
Identity = 200/279 (71.68%), Postives = 234/279 (83.87%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQ 840
            ELVNAIIRPPRARY + +LGP +F+F G+AF+R DF L N RG  L+CSHW+P+GWR AE+LPCVVY+HGNSSAR EALPQL+L LSLGATL++FD +GSG S GE+VSLGY+ERDDL AVI HLR SG V  +ALWGRSMGAATALLHGDRDP IAA+VLDSAFADLT LA EMV+RGR AGL VP +V  + +RM+R +V + ANFN++DLCPI+HANRT+IPALFV    DDFI+ HHS+QI +AYAGDKN V VDGDHNS RP FL DS+YIFLQ
Sbjct:   41 ELVNAIIRPPRARYEVEALGPVEFEFLGKAFKRLDFRLLNDRGHVLECSHWQPNGWRRAERLPCVVYMHGNSSARVEALPQLSLALSLGATLVSFDFAGSGRSGGEHVSLGYYERDDLKAVIEHLRKSGQVSTIALWGRSMGAATALLHGDRDPSIAALVLDSAFADLTQLAEEMVERGRQAGLTVPGIVVKMVMRMIRGTVTKTANFNVRDLCPIKHANRTFIPALFVAGLADDFIKPHHSKQICEAYAGDKNFVTVDGDHNSPRPGFLFDSVYIFLQ 319
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BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A6H5L444_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L444_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 6.520e-134
Identity = 199/279 (71.33%), Postives = 234/279 (83.87%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQ 840
            ELVNAIIRPPRARY + +LGP +F+F G+AF+R DF L N RG  L+CSHW+P GWR AE+LPCVVY+HGNSSAR EALPQL+L LSLGATL++FD +GSG S GE+VSLGY+ERDDL AVI HLR SG V  +ALWGRSMGAATALLHGDRDP IAA+VLDSAFADLT LA EMV+RGR AGL VP +V  + +RM+R +VA+ ANFN++DLCPI+HANRT+IPALFV    DDFI+ HHS+QI +AYAGDKN + VDGDHNS RP FL DS++IFLQ
Sbjct:   98 ELVNAIIRPPRARYEVEALGPVEFEFVGKAFKRLDFRLLNDRGHVLECSHWQPSGWRRAERLPCVVYMHGNSSARVEALPQLSLALSLGATLVSFDFAGSGKSGGEHVSLGYYERDDLKAVIEHLRKSGQVSTIALWGRSMGAATALLHGDRDPSIAALVLDSAFADLTQLAEEMVERGRQAGLTVPGIVVKMVMRMIRGTVAKTANFNVRDLCPIKHANRTFIPALFVAGLSDDFIKPHHSKQICEAYAGDKNFITVDGDHNSPRPGFLFDSVFIFLQ 376
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BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A7S2G2Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2Q1_9STRA)

HSP 1 Score: 374 bits (959), Expect = 6.200e-125
Identity = 187/281 (66.55%), Postives = 223/281 (79.36%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQVH 846
            ELVNAIIRPPRA Y    LGP++F F    F+R+DFEL N RGM   CSHWEP   R AE LPCV+Y+HGNSSAR EA+PQL+L L+LGAT+ AFD SGSG SDGEYVSLG++ER+DL  V++ LRAS  V  +ALWGRSMGAATALLHGDRDP IAAM+LDS FADLT+LA EMV +GR++GL VP  V ++A+R +R+SV + A FNI DL PI HA++ +IPALFV   GDDFI+ HHSQQIH+ YAGDKNLV+V+GDHNS RP FL DS+ IFLQ +
Sbjct:   47 ELVNAIIRPPRADYDDAHLGPKQFYFGKEKFQRTDFELRNERGMRFVCSHWEPMNRRAAE-LPCVIYMHGNSSARVEAVPQLSLCLALGATMFAFDFSGSGRSDGEYVSLGFFEREDLKVVVDFLRASERVSTIALWGRSMGAATALLHGDRDPSIAAMILDSPFADLTMLAEEMVDKGRESGLTVPGFVVSIAIRWIRSSVQKQAGFNINDLSPIAHADQCFIPALFVAGEGDDFIKHHHSQQIHEKYAGDKNLVIVEGDHNSPRPRFLFDSVTIFLQTY 326
[Close]
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A7S2SU53_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU53_9STRA)

HSP 1 Score: 368 bits (944), Expect = 5.360e-123
Identity = 186/279 (66.67%), Postives = 215/279 (77.06%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQ 840
            ELVNAIIRPPRA Y    LGP +F F G  F R+DFELTN RGM ++CSHWEP   R A  LPCV+Y+HGN+SARPEAL QLAL LSLGAT++AFD  GSG+S+G++VSLGY+ER+DL  V+ HLRAS  V  +ALWGRSMGAATALLHGDRDP IAAMVLDS FADL  LA EMV +GR  GL VP  V  +A+RM+R+SV + A FN++DL P  HA+R +IPALFV    DDFI  HH+QQIHD YAGDKN V V GDHNS RP FL+DS  IFLQ
Sbjct:   61 ELVNAIIRPPRAEYLPEQLGPTEFTFGGHQFTRTDFELTNERGMKIQCSHWEPVE-RKAVTLPCVIYMHGNASARPEALSQLALCLSLGATMVAFDFCGSGLSEGDWVSLGYFEREDLKVVVEHLRASDSVSTIALWGRSMGAATALLHGDRDPSIAAMVLDSPFADLNQLAEEMVDKGRQQGLTVPGFVVGIAIRMIRSSVQKQAGFNVRDLSPAAHADRCFIPALFVAGEDDDFIAPHHAQQIHDKYAGDKNFVKVAGDHNSSRPRFLYDSAAIFLQ 338
[Close]
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A7S2FNH9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNH9_9STRA)

HSP 1 Score: 360 bits (925), Expect = 3.540e-120
Identity = 181/283 (63.96%), Postives = 220/283 (77.74%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQ--LPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQVH 846
            ELVNAIIRPPRA Y    LGP KF F  + F+R D EL N R M +KCSHW+       +Q   PCV+Y+HGNSSAR EA+PQL+L L+LG TL AFD +GSG+SDGEYVSLG++ER+DL AV+++LR SG+V  +ALWGRSMGAAT+LLHGDRDP IAAMVLDS F+DLT LA EMV +GRD GL VP  V ++A+RM+++SV + A F+IKDL PI HA+R +IPALFV   GDDFI+  HS+ IH  YAGDKNLV+V+GDHNSQRP FL DS+ IFLQ +
Sbjct:   51 ELVNAIIRPPRADYEEAHLGPSKFYFGNQEFQRDDMELRNDRDMRIKCSHWKASSRSNKKQGPKPCVIYMHGNSSARLEAIPQLSLCLALGVTLFAFDFTGSGLSDGEYVSLGFFEREDLKAVVHYLRESGNVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSPFSDLTQLAEEMVDKGRDQGLTVPGFVVSIAIRMIKSSVQKQAGFDIKDLSPIAHADRCFIPALFVAGEGDDFIKPDHSRNIHAKYAGDKNLVIVEGDHNSQRPRFLFDSVAIFLQTY 333
[Close]
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A7S2PJU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJU5_9STRA)

HSP 1 Score: 354 bits (909), Expect = 1.450e-115
Identity = 173/279 (62.01%), Postives = 217/279 (77.78%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQ 840
            ELVNA IRPPRA Y + +LGP  F F GR F R+DF L   RGMAL+CSHWEP   R ++++PCV+Y+HGNSSAR E LPQL+ +LSLG  + AFD +GSG SDGEYVSLG++ER+DL  VI HLR +  V  +ALWGRSMGAATAL+HGDRDP IA M+LDS+FADLT LA EMV++GR+ G+ VP+ V ++A+RM++ SV + ANF+IK + PI HA++ +IPALFV    DDFI   HS+QIH  YAGDKN++LV+GDHNS RP F+ DS+ IFLQ
Sbjct:  182 ELVNAFIRPPRAEYKVEALGPPAFNFCGRRFTRTDFALKTKRGMALQCSHWEPVD-RTSDRIPCVIYMHGNSSARVEVLPQLSYLLSLGVAVFAFDFAGSGQSDGEYVSLGFYEREDLMCVIAHLRNTNVVSTIALWGRSMGAATALMHGDRDPSIACMILDSSFADLTQLAVEMVEKGREQGIVVPQFVVHIAIRMIKNSVKKLANFDIKSISPIAHADKCFIPALFVAGEHDDFIHPRHSEQIHAKYAGDKNMILVEGDHNSPRPKFMFDSVSIFLQ 459
[Close]
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: F0Y6U6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6U6_AURAN)

HSP 1 Score: 339 bits (870), Expect = 4.820e-114
Identity = 173/279 (62.01%), Postives = 206/279 (73.84%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQ-LPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFL 837
            ELVNAIIRPPRA Y +  LGP  F+++G AF+R D EL NPRGM L CSHW P     A    PC+VYLHGNSSAR EA+  LAL LS+G  L A D +GSG SDG++VSLGYWERDDL  V+ HLRASG V  VALWGRSMG+A AL HG RDP I+AMV D AFADL  LA E+VQ+ RD GL+VP  V ++ALRMVR+SV + A+F ++D+ PI+H +  ++PALFV    DDFI   HS+ +H  YAGDKNLVLV+GDHNS RP FL+DS  IFL
Sbjct:    2 ELVNAIIRPPRAEYDMDDLGPASFEWHGHAFQRVDLELVNPRGMRLACSHWSPAHRTAASPPRPCLVYLHGNSSARVEAVSHLALCLSIGIDLFALDFAGSGKSDGDWVSLGYWERDDLATVVAHLRASGKVSTVALWGRSMGSACALCHGHRDPSISAMVCDGAFADLPQLAEELVQKARDHGLSVPGFVVSIALRMVRSSVLKTADFKLEDVSPIKHVDSCFVPALFVAGERDDFIDPAHSRALHGKYAGDKNLVLVEGDHNSPRPRFLYDSAAIFL 280
[Close]
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A7S4ME46_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ME46_9STRA)

HSP 1 Score: 344 bits (882), Expect = 2.560e-113
Identity = 172/279 (61.65%), Postives = 211/279 (75.63%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQ 840
            ELVNAIIRPPRA+Y   +LGP  F F GR F R+DF L   RG+ L+CSHWEP   R + ++P V+Y+HGNSSAR E LPQL+ +LSLG  + AFD +GSG SDGEYVSLGY+ER+DL  V+ HLRA+  V  +ALWGRSMGAATAL+HGDRDP IA MVLDS+F+DLT L  EMV + R+ G+ VP  V NVA+RM+R SV + A+F+I+ + PI HA R +IPALFV    DDFI   H Q IHDAYAGDKN+++V+GDHNS RP F+ DS+ IFLQ
Sbjct:   10 ELVNAIIRPPRAQYKEENLGPPAFSFCGRRFTRTDFTLRTKRGLNLQCSHWEPVE-RTSARIPVVIYMHGNSSARVEVLPQLSYLLSLGVAVFAFDFAGSGKSDGEYVSLGYYEREDLMCVVAHLRATDVVSTIALWGRSMGAATALMHGDRDPSIACMVLDSSFSDLTTLCEEMVDKAREQGINVPNFVTNVAIRMIRGSVKKQADFDIRTISPISHAPRCFIPALFVAGEHDDFIDKSHGQNIHDAYAGDKNMIVVEGDHNSPRPRFMFDSVSIFLQ 287
[Close]
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Match: A0A1E7FSK1_9STRA (Alpha/beta-hydrolase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSK1_9STRA)

HSP 1 Score: 337 bits (863), Expect = 6.610e-113
Identity = 164/279 (58.78%), Postives = 212/279 (75.99%), Query Frame = 1 
Query:    4 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQ 840
            ELVNAIIRPPRA Y + +LGP  F F G+ F R+DF L   RG  L+CSHWEP   R+ +++P V+Y+HGNSSAR E LPQL+ +LS+G  + +FD +GSG SDGE+VSLGY+ER+DL  V+ HLRA+  V  +ALWGRSMGAAT+L+ GDRDP IA M+LDS FADLT LA EMV++GRD G+ VP  V ++ALRM+  SV + AN NIK++ PI HA++ +IPA FV    DDFI+ HH++ I++ YAGDKN+++V+GDHNS RP F+ DS  IFLQ
Sbjct:   10 ELVNAIIRPPRADYKMEALGPPAFTFCGKRFTRTDFTLKTKRGYNLECSHWEPVE-RITDRIPVVIYMHGNSSARVEVLPQLSYLLSMGVAVFSFDFAGSGKSDGEFVSLGYYEREDLSCVVAHLRATNVVSTIALWGRSMGAATSLMFGDRDPSIACMILDSPFADLTQLAEEMVEKGRDQGIVVPTFVVSMALRMITNSVKKQANVNIKNISPISHADKCFIPAFFVAGEHDDFIKKHHAEAIYEKYAGDKNIIIVEGDHNSPRPKFMFDSASIFLQ 287
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164164 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG95_9STRA4.650e-214100.00Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
D7FM32_ECTSI2.570e-13571.68RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L444_9PHAE6.520e-13471.33RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2G2Q1_9STRA6.200e-12566.55Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SU53_9STRA5.360e-12366.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FNH9_9STRA3.540e-12063.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2PJU5_9STRA1.450e-11562.01Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
F0Y6U6_AURAN4.820e-11462.01Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4ME46_9STRA2.560e-11361.65Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FSK1_9STRA6.610e-11358.78Alpha/beta-hydrolase (Fragment) n=1 Tax=Fragilario... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_30contigContig_30:288131..295006 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164164|e_gw1.30.231.1
Descriptionpalmitoyl-(protein) hydrolase activity
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1073@1|root,KOG1552@2759|Eukaryota
Evalue4.21e-136
Seed ortholog2880.D7FM32
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAlpha/beta hydrolase fold-5
Ec32 orthologEc-01_010480.1
TranscriptId164486
TrackFilteredModels1
ProteinId164164
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164164gene_5347Tribonema minus UTEX_B_3156 geneContig_30 288131..295006 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164164Trimin1|164164|e_gw1.30.231.1Tribonema minus UTEX_B_3156 polypeptideContig_30 288131..295006 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5347_7exon_5347_7Tribonema minus UTEX_B_3156 exonContig_30 288131..288256 -
exon_5347_6exon_5347_6Tribonema minus UTEX_B_3156 exonContig_30 288873..289004 -
exon_5347_5exon_5347_5Tribonema minus UTEX_B_3156 exonContig_30 289877..290046 -
exon_5347_4exon_5347_4Tribonema minus UTEX_B_3156 exonContig_30 291034..291142 -
exon_5347_3exon_5347_3Tribonema minus UTEX_B_3156 exonContig_30 292016..292189 -
exon_5347_2exon_5347_2Tribonema minus UTEX_B_3156 exonContig_30 293364..293505 -
exon_5347_1exon_5347_1Tribonema minus UTEX_B_3156 exonContig_30 294966..295006 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5347CDS_5347Tribonema minus UTEX_B_3156 CDSContig_30 294966..295006 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5347 ID=mRNA_5347|Name=jgi.p|Trimin1|164164|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=894bp|location=Sequence derived from alignment at Contig_30:288131..295006- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCTGGTGAATGCTATCATACGGCCGCCGAGAGCCAGGTACTCGAT
AGGGTCGTTGGGGCCGCGCAAGTTCAAGTTCAACGGCCGCGCGTTCCGCC
GCAGCGACTTTGAGCTTACCAACCCGCGCGGCATGGCGCTCAAGTGCAGC
CACTGGGAGCCCGACGGGTGGCGTGTAGCTGAGCAACTGCCGTGCGTGGT
GTACCTGCACGGCAACAGCAGCGCTCGCCCAGAGGCGCTGCCGCAGCTGG
CGCTGGTGCTGTCGCTGGGCGCCACGCTGCTGGCCTTTGACTGCAGCGGC
AGTGGCATGAGCGACGGCGAGTACGTCAGCCTGGGGTACTGGGAGAGGGA
CGACTTGGGCGCCGTCATCAACCACTTGCGTGCATCCGGCGACGTTGGTG
CGGTGGCACTCTGGGGCCGCAGCATGGGCGCTGCCACTGCACTGCTGCAC
GGCGACAGGGATCCAGGCATCGCGGCCATGGTCCTCGACAGCGCGTTTGC
GGACCTGACGCTGTTGGCCAACGAGATGGTGCAGCGCGGCCGCGACGCAG
GGCTCGCCGTGCCGCGCCTTGTGGCCAACGTCGCGCTGCGCATGGTGCGC
GCGAGCGTGGCGCGCGCCGCCAACTTCAACATCAAGGACCTGTGCCCGAT
AGAGCACGCCAACCGCACCTACATCCCCGCCCTCTTTGTCCACGCCACCG
GCGACGACTTCATCCGCGCGCACCACTCGCAGCAAATACACGACGCCTAC
GCGGGCGATAAAAACCTGGTTTTGGTGGACGGCGACCACAACAGCCAGAG
GCCCGACTTCCTGCACGACAGCATATACATATTCCTACAGGTACATGCCG
TAGCTGTGTGTGTGCTTCTGGTGGTGCATTGCGAGTTCACTTAA
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protein sequence of jgi.p|Trimin1|164164

>Trimin1|164164|e_gw1.30.231.1 ID=Trimin1|164164|e_gw1.30.231.1|Name=jgi.p|Trimin1|164164|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=298bp
MELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCS
HWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCSG
SGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLH
GDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVR
ASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAY
AGDKNLVLVDGDHNSQRPDFLHDSIYIFLQVHAVAVCVLLVVHCEFT*
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mRNA from alignment at Contig_30:288131..295006-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5347 ID=mRNA_5347|Name=jgi.p|Trimin1|164164|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6876bp|location=Sequence derived from alignment at Contig_30:288131..295006- (Tribonema minus UTEX_B_3156 )
ATGGAGCTGGTGAATGCTATCATACGGCCGCCGAGAGCCAGGTGCGCATG
GCGTATGCGCACTTGAAGTCTGGTCACTCTGACTCGTACTCGAGGACTCG
CGGTGGCGGGGGACTTGGAGCTGGTGAGCTCTAGGTGTTACACGGCTGCT
GAGAGCGAGGTTCGCGCAATGTGTACTTAGTATACTTCCGAGTACATAGA
TTTGTAGAAATAAAGCCGGTGCTGACTGTACAAGCATCAGCTGGCCTGTA
CAGGAAGTCGTTGTTGAAGTTGTACTCGTGGACTTGCAGTCAGAGACGCC
TTAAAGGTCGTGCTGGCCGGCACATGCTGAGATGGCAAACGCCCATGTAT
GCCTGAAATCCATGTTGAAGTTTGCATTAGTGAATTCCTTTTCAGTGACG
CTTGAGGAGTTGGGGTGGCGGGGCCATGTGGAGGTGGTGAGCGCTGTCAT
TCGGCCTCCGAGCGCCAGGTCCGCTACCGTCATGTGCCAAATTAGGCCGG
TCAGTCAAGAATTAGGAGCGTACCGGGCACCGATCCTTATTAGGCCTGGG
TGTTTTTTTGGGCATTCCTATTTAGGCCTGGTGGTACTTTTTGTGTGGTT
ACCCTATTGTGGCTTGCACATCATTTGGAAAGCAAGCAAGTACCTCCACG
TCTGAATGTGAGGATGGAGCTGGAGGTGGTATTGCTAGTGCTGCTGTTGG
GGCTCGCGGGTGGAGATAACACCCTTAAGATTTTGAGCTGTCTTTGACCA
CTGTGTGATGCAGCCGCTTGGCGCGAAATCGTTTTTCGCGTCAATGCAAC
TTCAAGTGTGTTTCCGGGATCGTGCAACGCGAAACAAAGCAGACACGCAC
TGTATTGCAGGTCTCGCTGATGGTCATATAGTGCCCAATTGGAGGTGTTT
TGAGGGCCCTGTCCTAATTGCGCCTGGTGCTTTTTTTGCGTGGTCCTTAT
TCAGTGTCCGAGTGCTTTTTTTGACCATTCTAAATCTTTGACCGACCGGC
CTTATTTGGCACATGACGGTACCTGAGCTTGAAGTTTATGTTGAAGTTTG
TACTTGGGTGGGTTCTTGAGGAGCGCACGGGCGAGGATATGCAGATGTGG
TGAACGCTGTCATTCGGGAATTCAGGTGCACATATCGCGTACTTGACGTT
CATACCACCTTGCTCGCTACGTATAATTCGGGCATGGCGGCAGCGCCTTT
GTAGCATTGCAAGGGGGGGTTAGGGTTAGGGTTCGTCCCAACTCTGGAGT
GTGATCATAAATGTGGGCCACCGTGGCCCGACCCATGCCTTACTTTGATC
AGTCGAGGCCATTGGGATAAGGACAGCACTTCAGTGTGATCACATGCGCA
CATGCGTGTTGGCGCCCGATGAGCGCACGCGAGGTTAGCACATGTGCACA
TGTCAACATACATTTAGTTGTCTCATCCTGCAGCTCACGCGCACTGCTCA
TCGTGACGTGCACACATACCTACCCCCCCCCCCCCCCCCCCCCCCCCGCA
GGTACTCGATAGGGTCGTTGGGGCCGCGCAAGTTCAAGTTCAACGGCCGC
GCGTTCCGCCGCAGCGACTTTGAGCTTACCAACCCGCGCGGCATGGCGCT
CAAGTGCAGCCACTGGGAGCCCGACGGGTGGCGTGTAGCTGAGGTGAGTG
CTGCTGCCGCACGCTAGTGCTCCACAGTGCCTGTCCCCAGTGCTCAACAG
TGCGCAGCAGCGTTCAAGCGCAGCCCCTGGGAGCCCCCCCCCCCCCCCCC
CCCCCCCGATGGGTGGCGTGTGGCGGAGGTGAGCGCTGCTGCCGCAAGCG
ACTGTCCCCAAGTGCTCCGCCGTGTTTGTTCTTGGGGTTAGGGTTAGATT
TTTTTCCTCAGCTCCACAGTGCTCAGCGCTCAAGCGCAGCCCCTGGGGGA
GCCCCGCCTCCTGATGGGTGGCGCGCAGCAACTGCCGCAGAAGGTGCGGT
CGCTGCCAGCGCAACGGTGCTGCTAGGCTGGGACGGGCGACCCCATCCTC
AACTTCAAGTTTTCCAACGCGGCAGTACGAACTTGCGGTTGTGGGCTGCA
AGCGTGCTGGTGCCTCAAGAAGGCGCAAGCCGTCCCGACAGCAGCCCCGG
GAGTCTGCAAACAGTACATGGTGTTCGAAAAAAAATCAGAAGCAGTTTGG
AGGCAGTTCACAACACTGCGAGTGTGATTCTGTAGCCGATCCTTGAGGGC
TAGGGCCAGGACTGCTGTCAGTTTGCTGCGCGAGAACCGCTTGCCCTGCT
GCAGCTTGCAACTGTGCGGCGCCTTAACCACGAGCTTTCCGCCCGTGCGC
AGCAACTACCGTGCGTGGTCACCTGCATGCAGCAGCAGCGCTCGTCCGGA
GGTGTCGCCGCAGCTGTCTTGCCCTAGGACTAGGGTTGGGACTAAGGGAA
GATTCAGCGAGAAAACGAGCAGCTGCCATGCATACAGTGCCTTCATACGT
GCACTGCCTTCATCACATTCTCTTCACCGCTGTGATGTGCCGCACCTGAC
GTGCGTGGCGTACCTGCGCGGCAACAGCAGCGCTCGGCCGGAGGCGCTGC
CGCAGCTGTCTTACCCTAGGAGTAGGGTCAGGGCTACTGGGATGCAGCTT
TTCAAACTGGTTGCCATACACTCAGTGCTTTCACTTCAAGCTTTTCGCCG
CTGCGCAGCAACTGCTGTACCTGCACGGCAACAGCAGCACTCGTCCGGCG
CAGCTGTCTTACCCGAGGACTAGGGTTAGGACTGAGGCAGCATCTAACTG
CCATGCGTACGGTGCCATTACACTCACGCTGCCTTTGCCACACTCTCGTC
GCCGCTGTACTCTGCAGCAACTGCCGTGCGTGGTGTACCTGCACGGCAAC
AGCAGCGCTCGCCCAGAGGCGCTGCCGCAGCTGGCGCTGGTGCTGTCGCT
GGGCGCCACGCTGCTGGCCTTTGACTGCAGCGGCAGTGGCATGAGCGACG
GCGAGTACGTCAGCCTGGGGTACTGGGAGAGGGACGACTTGGTGAGTGCA
ACACATACTTCAACAGTGAAGTGCTTATCTAGAGTACTGTATCCATAAAG
TCAAAAGTAAGGTGCACTGAGTACATGTGTGGTTCCGGTCAAGTTCAAGG
TTTTACACAAAGGAACAAACTGAGAAGTAGATATTACTGGGAGAGGGACA
ACCTGGTGAGTGCAACACGTACTTCAACAGTGAAGCATCACAACTTGTAC
TGGAGTTACTGTATCCATAAAGTGAAAGTTGTGCTGAAGTATGAGGGTAG
GGCTCATGTAAGGGTGTTGTACAGAAGCAAACTTAAAAGTAGGATGGCTT
GGTGAGTGCAACCTGCACGTCAAGAGTGCAGTAAGTTGTGCAGGAGTTTT
TCAAGCGGTAGGGGCTCAGGTCAACATCAGGGTGTTAGATATAAGACAAC
TTTGAGGCATGTAGGGCTCAGGGGTAGGGTGGGGGCTATTTGAAGTGTTA
GCTCACAGCAGATCGATCAAGCATGCCGCCGCGTGCTGTGCTCAGCACCC
TCACCACTACTTCAACTTGATTGTGACGCTGCTCACTTGCCCTCAGGGTG
CCGTCATCGACCACTTGCGCGCATCCGGTGACGTCGGCGCGGTGGCGCTT
CAAGCTCTTTGAACATGCTGTGTGAGCCAGGCTCATGATGGAAGGCCGCC
TAACCCTAACCCTAACCCACCCGCTACTCCAACTATGTTGTGCCTGAACT
TGCTTGTGGCGCTGCCCCGCTGTCCTCAGGGCGCCGTCATCGACGTTCAC
ATCGTTTATACTGGCATGTGCTAGATTTGCGCTATGCTCAGCACCCTTAC
CACTACTTCAACAGTGTTGTTGTCAAACTTCAACTTGCCTGTGACGCTTC
CCCGCTGGCCTCAGGGCGCCGTCATCAACCACTTGCGTGCATCCGGCGAC
GTTGGTGCGGTGGCACTCTGGGGCCGCAGCATGGGCGCTGCCACTGCACT
GCTGCACGGCGACAGGGATCCAGGTACATTTTATTCCAAATTCAACTCAC
ATGGGTGGCCGCGACTGCGCTGCTGCAGCGCTACAGGGACCCAGCCACAA
GCCTTCTTTCACCACTTCAAACTTTGATTTCATTCGATTTCGCGCCTGTC
ATAGACATCCGAGGTGCAAATGCACCATGAATGCCGCAACCACGGCAGGG
ACCCATGTCATTGATAGGAGTTCAGCTTGTTTCTCACAACGTTTTTTGTT
AGCAGTGCGCGCCTTGTTTTGTTTTCGCTGCCACTACGTGTGCCGGCACG
GCGACGCAGAAATATTAAACTCAACTGTCCACTTCAATGCCCGGCTTCAA
AAAATCAAAACAGTTTGCCTCTAGGAATCACAGGCGACTAAGTTCCATGT
CCGCGGGTCAGCTGTGCTCTTTAGAGCACTTGCTCAGAACTCTACTAGGG
TTAGGGTTAGGGTTAGAGTTTAGCGCACGTGGCACAGCACTCAAATCGTG
AGACCACTCACTTGCCCGCAGTCTTGAAAGGTGTTCGTTCCGCATCGCCT
GTGGTGCGCTTTACCGCATATGCGGACCCAAGCTGCTGGCGGCCACTAGG
CGCAGCGCTCTCTATACCTCAACTTCTTCAGGAGCGCACACTCGCGCCCC
TCTATACTATACACTATACTATACACAGCGGCATCGGCGCCCAGCTCCGC
CTCTGCATACCTTCTGACATTTGAGACACCTACAACCTTTGAAGTTTGGA
GAATCATACGTACAAGCTGTGCTCCCCATCATCAGAACACAAAGTATGGA
TCGGTTTGGTTTAGTTGCTCGGCGGCGTGCGCGTGCAGGCATCGCCGCCA
TGGTCGTCGACAGCGCGTTTGCGGACCTGGCGCTGTTGCCTGCATAGCGC
AATGGCGCAGCTCTCTCACTTCCCTTGATGGCTCTATGAGGCACATCAGC
AGCAGTGCTCAGCGCCTGCCCCCGCCTCTCACCTCTCGCTCCGCCTTCTG
CCTCTCTCAGGCATCGCGGCCATGGTCCTCGACAGCGCGTTTGCGGACCT
GACGCTGTTGGCCAACGAGATGGTGCAGCGCGGCCGCGACGCAGGGCTCG
CCGTGCCGCGCCTTGTGGCCAACGTCGCGCTGCGCATGGTGCGCGCGAGC
GTGGCGCGCGCCGCCAACTTCAACATCAAGGTGAGCTTCTTTATTGAAGT
TGACAAAGGTGAAGTTGTTTTCTTTGACGCAGGACTCGCCGTGCCGCGCC
TCGTGGCCAACTTCGCGCTGCGCATGGTATGCGCGGACGTGGCGCGCGCC
GCCAACTTCAACATCAAGGTGATCTTTTGATGAAGTTGGCCTAGCCGTGG
TTGTGCCGCGCCTCATGGCAAACGCCGCGCTGCGCACGGTATGCGCGAGC
AAGGCGCGCGCCACCAACTTCAACATGAAGGTAAACAAAAAAAGTTTTGA
AACTGGCCGCGCTGTGGCGCGTCGAACAACGTGGCGGCAGCGTGCGCTTC
GCCTCCGACTTCAACATCAAGGCGCCCTCGCCGCCGCCGCAGCCCGGAGA
GACGAGTCGGGCTTTTTCAACTGAACGCCACCTTGCAGCAGAGGCAAAGT
TCAACAGCAGACGGAGAGCGCATGTTTGGCCGCTCCGCATTGTGTTGCGG
CCAGGGTAGCGTCGCGCTGCGCTGCGCAGGCATGCATGTTACACTAAGGT
TCAGGGTTAGGGTTAGCGACGCCTGGCATCAGGAGATGCAAAAAAATGCC
CACCAGTTCTCGCCTGCAACTCCCAACCTCAGCCCGCAAAGCCCATGCGC
CACTGAAAAATGCTGGTGGCTGCTGCCACGTCTTGCCCTGTTTGTTTGTT
TTTTGCGTTCAGAGTGCACAGGCCCACGAAGGCGCACTCGTAGGACGCAC
GCATGGCGCGTGACGGCTTGTGCGCCGCAAAGGACCCCGCAACGTCTTCT
GCTGCGTGCTGCATGCAGTTCGCACTTGAAGATGTGCACTTGAAGATGCA
CGCGCGACGTACGTGTCGGTGACGCGCGTGCCTCTGCGCGTTGTTCTCGC
AGGACCTGTGCCCGATAGAGCACGCCAACCGCACCTACATCCCCGCCCTC
TTTGTCCACGCCACCGGCGACGACTTCATCCGCGCGCACCACTCGCAGCA
AATACACGACGCCTACGCGGGCGATAAAAACCTGGTGAGCCCCATATGAA
AACGAATTAAAAGACCGTAGAGCTCTAGGTGACAAGGGATGGTTTGCCGC
AAGTGCCTTCCACCAGTAACTGTGGTCGCCGCTGCTGCAGCGATTGGCCA
CGAGTCAAACAGTACCACCATACATTTCTCCTGGCTTGGATGTTCGACGG
CGCATCGCTGTAGGTGGCAAGACACAACAAAGTTGCGGTTGCCCACCGCA
AGGTGGCTGACCCGTTACTGCAGCGCACGCTGCGACAGCAAATTGGCAAA
GGTTAGGGGTAGGGCTAAGGTTAGGGTTGCTAACACTATGGCCCGCAATG
AACGCTGGTGCACGTATGGCAGAAACGTAAGCAGCAGTGCTCGCCTCATC
CTCACCTCAGTACTGCAGCACCAGCACACCTGAGCTACAGGGAACCTGCC
CCACCTTCACGTGTCTCTTGCTCTACCTCTTCGAATCAGGGGTTTGTAGA
GGGCCGAGGCTAAAAGTTCGTCCTCTGCGCCTTACCTTAGCCCACCCCGC
TGTATGTCGAAGTGCTGAAGTGCCCACCCCACCCTCTGAACTGCCTCAGT
GCTCAGCGCAGTGCGTACCTGCCTACCCCCTGCGTTGCTCGCTGCCACAG
GTTTTGGTGGACGGCGACCACAACAGCCAGAGGCCCGACTTCCTGCACGA
CAGCATATACATATTCCTACAGGTACATGCCGTAGCTGTGTGTGTGCTTC
TGGTGGTGCATTGCGAGTTCACTTAA
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Coding sequence (CDS) from alignment at Contig_30:288131..295006-

>mRNA_5347 ID=mRNA_5347|Name=jgi.p|Trimin1|164164|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=894bp|location=Sequence derived from alignment at Contig_30:288131..295006- (Tribonema minus UTEX_B_3156 )
ATGGAGCTGGTGAATGCTATCATACGGCCGCCGAGAGCCAGGTACTCGAT
AGGGTCGTTGGGGCCGCGCAAGTTCAAGTTCAACGGCCGCGCGTTCCGCC
GCAGCGACTTTGAGCTTACCAACCCGCGCGGCATGGCGCTCAAGTGCAGC
CACTGGGAGCCCGACGGGTGGCGTGTAGCTGAGCAACTGCCGTGCGTGGT
GTACCTGCACGGCAACAGCAGCGCTCGCCCAGAGGCGCTGCCGCAGCTGG
CGCTGGTGCTGTCGCTGGGCGCCACGCTGCTGGCCTTTGACTGCAGCGGC
AGTGGCATGAGCGACGGCGAGTACGTCAGCCTGGGGTACTGGGAGAGGGA
CGACTTGGGCGCCGTCATCAACCACTTGCGTGCATCCGGCGACGTTGGTG
CGGTGGCACTCTGGGGCCGCAGCATGGGCGCTGCCACTGCACTGCTGCAC
GGCGACAGGGATCCAGGCATCGCGGCCATGGTCCTCGACAGCGCGTTTGC
GGACCTGACGCTGTTGGCCAACGAGATGGTGCAGCGCGGCCGCGACGCAG
GGCTCGCCGTGCCGCGCCTTGTGGCCAACGTCGCGCTGCGCATGGTGCGC
GCGAGCGTGGCGCGCGCCGCCAACTTCAACATCAAGGACCTGTGCCCGAT
AGAGCACGCCAACCGCACCTACATCCCCGCCCTCTTTGTCCACGCCACCG
GCGACGACTTCATCCGCGCGCACCACTCGCAGCAAATACACGACGCCTAC
GCGGGCGATAAAAACCTGGTTTTGGTGGACGGCGACCACAACAGCCAGAG
GCCCGACTTCCTGCACGACAGCATATACATATTCCTACAGGTACATGCCG
TAGCTGTGTGTGTGCTTCTGGTGGTGCATTGCGAGTTCACTTAA
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