mRNA_5322 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348689
Unique Name	mRNA_5322
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|348689 vs. uniprot
Match: A0A835Z5N4_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N4_9STRA)

HSP 1 Score: 1000 bits (2585), Expect = 0.000e+0
Identity = 784/784 (100.00%), Postives = 784/784 (100.00%), Query Frame = 3

Query:  144 MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHYETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASAAEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQFGYPEFGSGVPGTRAQVPTTSDAQQPASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGDFGYKQQQQAGSPPGAWAGPAPGTPGMPQXXXXXXXXQQHGMYPGQPAXXXXXXXXXXXXXXXXXWPGAAPQMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWGAEPYGSPGSPPSARPEAPYGDPYRREGRGGAXXXXXXXXXXXXXXXQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAPPQRQXXXXXPRYDAYGRPLPPAPGAWGGDDGMYQEQRGGYGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYGPPQGAGPWGDERYGPXXXXXXXXYDRDPYGRPDDRGGYAPDARGVYGGXXXXXXXXXXXXXXXRPPGVAAGGPAQPPYGGDRYPPQYGGEVPQQXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRDRFGGQGAPQQGGYGGGAPAQAXEQAGXXXXXXXXXXXXXXGPSQPWGQ 2495
            MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHYETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASAAEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQFGYPEFGSGVPGTRAQVPTTSDAQQPASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGDFGYKQQQQAGSPPGAWAGPAPGTPGMPQXXXXXXXXQQHGMYPGQPAXXXXXXXXXXXXXXXXXWPGAAPQMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWGAEPYGSPGSPPSARPEAPYGDPYRREGRGGAXXXXXXXXXXXXXXXQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAPPQRQXXXXXPRYDAYGRPLPPAPGAWGGDDGMYQEQRGGYGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYGPPQGAGPWGDERYGPXXXXXXXXYDRDPYGRPDDRGGYAPDARGVYGGXXXXXXXXXXXXXXXRPPGVAAGGPAQPPYGGDRYPPQYGGEVPQQXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRDRFGGQGAPQQGGYGGGAPAQAXEQAGXXXXXXXXXXXXXXGPSQPWGQ
Sbjct:    1 MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHYETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASAAEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQFGYPEFGSGVPGTRAQVPTTSDAQQPASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGDFGYKQQQQAGSPPGAWAGPAPGTPGMPQXXXXXXXXQQHGMYPGQPAXXXXXXXXXXXXXXXXXWPGAAPQMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWGAEPYGSPGSPPSARPEAPYGDPYRREGRGGAXXXXXXXXXXXXXXXQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAPPQRQXXXXXPRYDAYGRPLPPAPGAWGGDDGMYQEQRGGYGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYGPPQGAGPWGDERYGPXXXXXXXXYDRDPYGRPDDRGGYAPDARGVYGGXXXXXXXXXXXXXXXRPPGVAAGGPAQPPYGGDRYPPQYGGEVPQQXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRDRFGGQGAPQQGGYGGGAPAQAXEQAGXXXXXXXXXXXXXXGPSQPWGQ 784

[Close]

BLAST of jgi.p|Trimin1|348689 vs. uniprot
Match: D8LJY1_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY1_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.880e-9
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 3

Query: 1590 PAPGAWGG----DDGMYQEQRGG-----------YGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYG-PPQ 1985
            PA G +GG    +DG YQ   GG           YGG      ALVP+  G   A  GG  V++ GLQLV+GAW R+LVGKD+  A L  A+E+          GIA++T  A  ++++T+G VT RV  +L+ + + + GPYG PPQ
Sbjct:  493 PARGDYGGYYGRNDGYYQGPPGGNGAPTQQGNAEYGGFPAGSRALVPSNGG---APRGGLEVKEQGLQLVKGAWARILVGKDKTTAALYEAKEKA---------GIAAST--ASYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQ 626

[Close]

BLAST of jgi.p|Trimin1|348689 vs. uniprot
Match: A0A6H5KXY0_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXY0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 6.920e-9
Identity = 58/141 (41.13%), Postives = 80/141 (56.74%), Query Frame = 3

Query: 1599 GAWGGDDGMYQEQRGGYGGXX----GEYG-------ALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYG-PPQ 1985
            G +G +DG YQ   GG GG       EYG       ALVP   G   A  GG  V++ GLQLV+GAW R+LVGKD+  A L  A+E+          G+A++T  A  ++++T+G VT RV  +L+ + + + GPYG PPQ
Sbjct:  446 GYYGRNDGYYQGPPGGNGGSRQQGNAEYGGFPAGSRALVPNNGG---APRGGLEVKEQGLQLVKGAWARILVGKDKTRAALHDAKEKA---------GVAAST--ATYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQ 572

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348689 vs. uniprot

BLAST of jgi.p|Trimin1|348689 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835Z5N4_9STRA	0.000e+0	100.00	WW domain-containing protein n=1 Tax=Tribonema min...	[more]
D8LJY1_ECTSI	3.880e-9	40.54	WW domain-containing protein n=1 Tax=Ectocarpus si...	[more]
A0A6H5KXY0_9PHAE	6.920e-9	41.13	WW domain-containing protein n=1 Tax=Ectocarpus sp...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_30	contig	Contig_30:143224..146213 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348689\|estExt_Genemark1.C_Ctg_300022
Hectar predicted targeting category	other localisation
TranscriptId	349011
Track	FilteredModels1
ProteinId	348689

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348689	gene_5322	Tribonema minus UTEX_B_3156	gene	Contig_30 143224..146213 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348689	Trimin1\|348689\|estExt_Genemark1.C_Ctg_300022	Tribonema minus UTEX_B_3156	polypeptide	Contig_30 143367..145945 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5322_1	exon_5322_1	Tribonema minus UTEX_B_3156	exon	Contig_30 143224..143471 +
exon_5322_2	exon_5322_2	Tribonema minus UTEX_B_3156	exon	Contig_30 143552..143665 +
exon_5322_3	exon_5322_3	Tribonema minus UTEX_B_3156	exon	Contig_30 143810..146213 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_5322	UTR5_5322	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_30 143224..143366 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5322	CDS_5322	Tribonema minus UTEX_B_3156	CDS	Contig_30 143367..143471 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5322	UTR3_5322	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_30 145946..146213 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_30:143224..146213+
coding sequence from alignment at Contig_30:143224..146213+

spliced messenger RNA

>mRNA_5322 ID=mRNA_5322|Name=jgi.p|Trimin1|348689|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2766bp|location=Sequence derived from alignment at Contig_30:143224..146213+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGAACTTTGCCCCAGCGGCGAACGTGCCTGGCAGCCTGCCTGCTCAGCC
TGCTGCTGCTGGCGCACCAGGGTGCAGCGAACTCAGGCATTCCTGGGCAG
CCTGTAGCGTTCGGTGGTGCGCTTCAGAACCACGGCAGGCCCTATGGCGG
GCAGCCTGGAGCTCAAGGCCATGGCGGCGGAGGGACTCAGCAGCAGTACC
AGCAGCGCCCGCAGCAGCAGCATCCGCAGCACCAACAGCAGCAGCAGCGT
GCAGACCAAGGATGTGCCGCCCCGCGTCTACTACGTGCACTACGAGACGC
GTCGGACGCAGTGGGAGAGGCCCGCCATGCCGCCTGCTTACCAGCAGCAG
CAGCAACCGCATTATGAGCAAGCCGGCGCTGAGGACACGGATGCCGAGGC
GGGACAGGAGGTGGATAAGCAAGCAGCGGACGATGCCAGCGCTGCTGAAA
AAGGCATTGCTGGCGGCGACGACTTGCGAGACTCGTCCGAAGAAGATGAC
GCCAATGTCGCGCTGCCGAGTGTGGACTTCATGGCACAGTACTCCGGCAA
CGGGCCCGATTTGTCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCATG
CAACTACCGCACGGCCGCCGGCAGCTCTGCAGCACCAGGAGCAGAGGCCT
GCAGCAGAAGAAGAACAATTTGGCTATCCGGAGTTTGGTTCAGGGGTTCC
GGGCACTCGTGCCCAGGTGCCAACGACATCAGATGCTCAACAGCCAGCTA
GCGGTGATGGCGGCGAAAACGGCGCCGTGCCGCCGCTGCAGCACGAGCAG
GAGCAGCAGCAGCGGCGGCCCATGATGCACACACACTGGGCGGAGCCGCG
CGCGCAATCCAACGGCGGGGAGAGCGACGGCGGCCGCGGCGACTTCGGTT
ACAAGCAGCAGCAGCAAGCGGGATCGCCACCTGGCGCATGGGCGGGGCCC
GCGCCAGGCACGCCCGGCATGCCGCAGCAGCAGCAGCAGCCGCGGCAGCA
GCAGCAGCACGGCATGTACCCTGGGCAGCCCGCGCAGCCGCCGCGGCAAC
AGCCGCAGCAGAACATGTACCCCACGCAGCCGGCATGGCCAGGCGCGGCG
CCGCAGATGCCGCCGCCGCAGCAGCAGCAGCAGCAGCGGCGGCAGGGCAG
GGAGGAGGAGCCGGAGCGGCCGCCTCGGGAGGTGCCTGGCAGCAGCAGCA
GCGGCGGCGGCGCGCCATGGCAGCAGCAGACGCCTCCGCCCCAGCAGCAG
CAGCAGCAGCCGCCGCAGCAACGCTGGGGAGCAGAGCCCTATGGCTCACC
CGGCTCGCCGCCATCAGCCAGGCCGGAAGCACCCTATGGCGATCCTTACA
GGCGGGAGGGGCGGGGGGGGGCGCCGCCGCAGCAGTACCGGCAGCCGCCA
CCGCAGCAGCAGTGGGGGCAGCAGGGACCGCCACCGCAGCAGCAGCAGCA
GCAGCCGCCGTATGGCGCGCAGATGCCGCAGCAGCCGTACTACGGCGGCG
GCCCGCAGCAGCAGCAGCGCGGAGCGCCGCCACAGCGGCAGCCGCCGCAG
CAGCAGCCGCGGTACGACGCGTACGGGCGGCCGCTGCCCCCCGCGCCCGG
CGCCTGGGGCGGCGACGACGGCATGTACCAGGAGCAGAGGGGGGGCTACG
GGGGCGGCGGTGGCGAGTACGGAGCGCTGGTGCCTGCGGGGCGCGGCGGC
AGCAGCGCTCAGGGCGGCGGCGCGTCCGTGCGCGACACGGGGCTGCAGCT
CGTGCGCGGCGCGTGGGGGCGCCTGCTCGTCGGCAAGGACCGCGGCGCCG
CGCTGCTGTCCAGCGCGCGCGAGCGCGTGAGCGAGGGCGCCGCGGCCGCG
TCTACGGGCATCGCGTCGGCGACGTGGGCCGCGGGCGCACGCGTGCGCGA
CACCGTCGGCGGCGTCACGCAGCGCGTCGGCACGCTGCTCGACGCCAACG
GCCGCCGCGTCGACGGCCCGTACGGGCCGCCGCAGGGGGCGGGGCCCTGG
GGGGACGAGCGCTACGGCCCCCCTGGTGGCGGCGGCGGGGGCGGGTACGA
TCGCGATCCGTACGGCCGCCCAGATGACCGTGGCGGTTATGCCCCGGATG
CCAGGGGGGTGTATGGGGGTCCCCCGGGGCAGTATGGGGGGGGAGGCAGG
GGGAGGGAGGCGTACCGGCCGCCGGGGGTGGCGGCGGGGGGGCCTGCGCA
GCCCCCCTACGGCGGCGACAGGTATCCGCCTCAGTATGGCGGGGAAGTGC
CGCAGCAGCAGGAGTGGCAGCAGCAGCAGCAGCGCCGTGCTGTGCCCCCG
CAGCAGCAGCAGCAGCGGTGGGGCGGGCCACCGGGCGGTCCCGGCCGGGA
CAGATTTGGGGGGCAAGGGGCGCCACAACAGGGGGGGTATGGGGGGGGCG
CGCCTGCACAGGCAGGGGAGCAGGCAGGGGCTTTTGGCGGATATGGGGCA
CCGCAGGGCGCAGCAGGCGGTGGGCCATCTCAACCTTGGGGGCAGTAAAG
ATGCTTTGAGGAAGGAAGTGTCATGGACTTGAAGCTGGCAGGAGCCATGC
TTGGCAGTAGTGTCACGAGTGGACTCGTGCCGGTGATTCCTTCATGTCAA
GTTCATGAATGGTTCACGTGCCTGGTGGTCATGCACTAAAAGGAGGGAGG
GGGGCTGCAAGTGCAGCGCAGAGAAGATGTCATACTATACAGCCAGTATT
GGCGTCGCGCTGCCTTTGCGTTGACGTGACTGACATAAAGAGCACAATAC
ATGAGAGCACATCACA

protein sequence of jgi.p|Trimin1|348689

>Trimin1|348689|estExt_Genemark1.C_Ctg_300022 ID=Trimin1|348689|estExt_Genemark1.C_Ctg_300022|Name=jgi.p|Trimin1|348689|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=785bp
MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHY
ETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASA
AEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPPPPPQQQQ
QHATTARPPAALQHQEQRPAAEEEQFGYPEFGSGVPGTRAQVPTTSDAQQ
PASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGD
FGYKQQQQAGSPPGAWAGPAPGTPGMPQQQQQPRQQQQHGMYPGQPAQPP
RQQPQQNMYPTQPAWPGAAPQMPPPQQQQQQRRQGREEEPERPPREVPGS
SSSGGGAPWQQQTPPPQQQQQQPPQQRWGAEPYGSPGSPPSARPEAPYGD
PYRREGRGGAPPQQYRQPPPQQQWGQQGPPPQQQQQQPPYGAQMPQQPYY
GGGPQQQQRGAPPQRQPPQQQPRYDAYGRPLPPAPGAWGGDDGMYQEQRG
GYGGGGGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDR
GAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLD
ANGRRVDGPYGPPQGAGPWGDERYGPPGGGGGGGYDRDPYGRPDDRGGYA
PDARGVYGGPPGQYGGGGRGREAYRPPGVAAGGPAQPPYGGDRYPPQYGG
EVPQQQEWQQQQQRRAVPPQQQQQRWGGPPGGPGRDRFGGQGAPQQGGYG
GGAPAQAGEQAGAFGGYGAPQGAAGGGPSQPWGQ*

mRNA from alignment at Contig_30:143224..146213+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5322 ID=mRNA_5322|Name=jgi.p|Trimin1|348689|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2990bp|location=Sequence derived from alignment at Contig_30:143224..146213+ (Tribonema minus UTEX_B_3156 )
GCGAACTTTGCCCCAGCGGCGAACGTGCCTGGCAGCCTGCCTGCTCAGCC
TGCTGCTGCTGGCGCACCAGGGTGCAGCGAACTCAGGCATTCCTGGGCAG
CCTGTAGCGTTCGGTGGTGCGCTTCAGAACCACGGCAGGCCCTATGGCGG
GCAGCCTGGAGCTCAAGGCCATGGCGGCGGAGGGACTCAGCAGCAGTACC
AGCAGCGCCCGCAGCAGCAGCATCCGCAGCACCAACAGCAGCAGCAGCGT
GGCTTCGAGCAGCGTGCTCCAGTGCAACATCAAGAGCATGGCAGCATGCC
GCCGCCGCTGCCCCCCGGCTGGGGAGAGGTGCAGACCAAGGATGTGCCGC
CCCGCGTCTACTACGTGCACTACGAGACGCGTCGGACGCAGTGGGAGAGG
CCCGCCATGCCGCCTGCTTACCAGCAGCAGCAGCAACCGCATGTAGGAAT
CCAGCATCAGGATACACCATCGCAGCAGCAGCAGCACCAGCAGCAGCATT
CCGGTGATATGAGGCCTGCGGAGCACACTCGTCATCCCGCTGCAAGGCAG
GATGCAGCATTTGGGAGCAGCCCTGCTCGATCGCAGTATGAGCAAGCCGG
CGCTGAGGACACGGATGCCGAGGCGGGACAGGAGGTGGATAAGCAAGCAG
CGGACGATGCCAGCGCTGCTGAAAAAGGCATTGCTGGCGGCGACGACTTG
CGAGACTCGTCCGAAGAAGATGACGCCAATGTCGCGCTGCCGAGTGTGGA
CTTCATGGCACAGTACTCCGGCAACGGGCCCGATTTGTCGCCGCCGCCGC
CGCCGCAGCAGCAGCAGCAGCATGCAACTACCGCACGGCCGCCGGCAGCT
CTGCAGCACCAGGAGCAGAGGCCTGCAGCAGAAGAAGAACAATTTGGCTA
TCCGGAGTTTGGTTCAGGGGTTCCGGGCACTCGTGCCCAGGTGCCAACGA
CATCAGATGCTCAACAGCCAGCTAGCGGTGATGGCGGCGAAAACGGCGCC
GTGCCGCCGCTGCAGCACGAGCAGGAGCAGCAGCAGCGGCGGCCCATGAT
GCACACACACTGGGCGGAGCCGCGCGCGCAATCCAACGGCGGGGAGAGCG
ACGGCGGCCGCGGCGACTTCGGTTACAAGCAGCAGCAGCAAGCGGGATCG
CCACCTGGCGCATGGGCGGGGCCCGCGCCAGGCACGCCCGGCATGCCGCA
GCAGCAGCAGCAGCCGCGGCAGCAGCAGCAGCACGGCATGTACCCTGGGC
AGCCCGCGCAGCCGCCGCGGCAACAGCCGCAGCAGAACATGTACCCCACG
CAGCCGGCATGGCCAGGCGCGGCGCCGCAGATGCCGCCGCCGCAGCAGCA
GCAGCAGCAGCGGCGGCAGGGCAGGGAGGAGGAGCCGGAGCGGCCGCCTC
GGGAGGTGCCTGGCAGCAGCAGCAGCGGCGGCGGCGCGCCATGGCAGCAG
CAGACGCCTCCGCCCCAGCAGCAGCAGCAGCAGCCGCCGCAGCAACGCTG
GGGAGCAGAGCCCTATGGCTCACCCGGCTCGCCGCCATCAGCCAGGCCGG
AAGCACCCTATGGCGATCCTTACAGGCGGGAGGGGCGGGGGGGGGCGCCG
CCGCAGCAGTACCGGCAGCCGCCACCGCAGCAGCAGTGGGGGCAGCAGGG
ACCGCCACCGCAGCAGCAGCAGCAGCAGCCGCCGTATGGCGCGCAGATGC
CGCAGCAGCCGTACTACGGCGGCGGCCCGCAGCAGCAGCAGCGCGGAGCG
CCGCCACAGCGGCAGCCGCCGCAGCAGCAGCCGCGGTACGACGCGTACGG
GCGGCCGCTGCCCCCCGCGCCCGGCGCCTGGGGCGGCGACGACGGCATGT
ACCAGGAGCAGAGGGGGGGCTACGGGGGCGGCGGTGGCGAGTACGGAGCG
CTGGTGCCTGCGGGGCGCGGCGGCAGCAGCGCTCAGGGCGGCGGCGCGTC
CGTGCGCGACACGGGGCTGCAGCTCGTGCGCGGCGCGTGGGGGCGCCTGC
TCGTCGGCAAGGACCGCGGCGCCGCGCTGCTGTCCAGCGCGCGCGAGCGC
GTGAGCGAGGGCGCCGCGGCCGCGTCTACGGGCATCGCGTCGGCGACGTG
GGCCGCGGGCGCACGCGTGCGCGACACCGTCGGCGGCGTCACGCAGCGCG
TCGGCACGCTGCTCGACGCCAACGGCCGCCGCGTCGACGGCCCGTACGGG
CCGCCGCAGGGGGCGGGGCCCTGGGGGGACGAGCGCTACGGCCCCCCTGG
TGGCGGCGGCGGGGGCGGGTACGATCGCGATCCGTACGGCCGCCCAGATG
ACCGTGGCGGTTATGCCCCGGATGCCAGGGGGGTGTATGGGGGTCCCCCG
GGGCAGTATGGGGGGGGAGGCAGGGGGAGGGAGGCGTACCGGCCGCCGGG
GGTGGCGGCGGGGGGGCCTGCGCAGCCCCCCTACGGCGGCGACAGGTATC
CGCCTCAGTATGGCGGGGAAGTGCCGCAGCAGCAGGAGTGGCAGCAGCAG
CAGCAGCGCCGTGCTGTGCCCCCGCAGCAGCAGCAGCAGCGGTGGGGCGG
GCCACCGGGCGGTCCCGGCCGGGACAGATTTGGGGGGCAAGGGGCGCCAC
AACAGGGGGGGTATGGGGGGGGCGCGCCTGCACAGGCAGGGGAGCAGGCA
GGGGCTTTTGGCGGATATGGGGCACCGCAGGGCGCAGCAGGCGGTGGGCC
ATCTCAACCTTGGGGGCAGTAAAGATGCTTTGAGGAAGGAAGTGTCATGG
ACTTGAAGCTGGCAGGAGCCATGCTTGGCAGTAGTGTCACGAGTGGACTC
GTGCCGGTGATTCCTTCATGTCAAGTTCATGAATGGTTCACGTGCCTGGT
GGTCATGCACTAAAAGGAGGGAGGGGGGCTGCAAGTGCAGCGCAGAGAAG
ATGTCATACTATACAGCCAGTATTGGCGTCGCGCTGCCTTTGCGTTGACG
TGACTGACATAAAGAGCACAATACATGAGAGCACATCACA

Coding sequence (CDS) from alignment at Contig_30:143224..146213+

>mRNA_5322 ID=mRNA_5322|Name=jgi.p|Trimin1|348689|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2355bp|location=Sequence derived from alignment at Contig_30:143224..146213+ (Tribonema minus UTEX_B_3156 )
ATGGCGGGCAGCCTGGAGCTCAAGGCCATGGCGGCGGAGGGACTCAGCAG
CAGTACCAGCAGCGCCCGCAGCAGCAGCATCCGCAGCACCAACAGCAGCA
GCAGCGTGCAGACCAAGGATGTGCCGCCCCGCGTCTACTACGTGCACTAC
GAGACGCGTCGGACGCAGTGGGAGAGGCCCGCCATGCCGCCTGCTTACCA
GCAGCAGCAGCAACCGCATTATGAGCAAGCCGGCGCTGAGGACACGGATG
CCGAGGCGGGACAGGAGGTGGATAAGCAAGCAGCGGACGATGCCAGCGCT
GCTGAAAAAGGCATTGCTGGCGGCGACGACTTGCGAGACTCGTCCGAAGA
AGATGACGCCAATGTCGCGCTGCCGAGTGTGGACTTCATGGCACAGTACT
CCGGCAACGGGCCCGATTTGTCGCCGCCGCCGCCGCCGCAGCAGCAGCAG
CAGCATGCAACTACCGCACGGCCGCCGGCAGCTCTGCAGCACCAGGAGCA
GAGGCCTGCAGCAGAAGAAGAACAATTTGGCTATCCGGAGTTTGGTTCAG
GGGTTCCGGGCACTCGTGCCCAGGTGCCAACGACATCAGATGCTCAACAG
CCAGCTAGCGGTGATGGCGGCGAAAACGGCGCCGTGCCGCCGCTGCAGCA
CGAGCAGGAGCAGCAGCAGCGGCGGCCCATGATGCACACACACTGGGCGG
AGCCGCGCGCGCAATCCAACGGCGGGGAGAGCGACGGCGGCCGCGGCGAC
TTCGGTTACAAGCAGCAGCAGCAAGCGGGATCGCCACCTGGCGCATGGGC
GGGGCCCGCGCCAGGCACGCCCGGCATGCCGCAGCAGCAGCAGCAGCCGC
GGCAGCAGCAGCAGCACGGCATGTACCCTGGGCAGCCCGCGCAGCCGCCG
CGGCAACAGCCGCAGCAGAACATGTACCCCACGCAGCCGGCATGGCCAGG
CGCGGCGCCGCAGATGCCGCCGCCGCAGCAGCAGCAGCAGCAGCGGCGGC
AGGGCAGGGAGGAGGAGCCGGAGCGGCCGCCTCGGGAGGTGCCTGGCAGC
AGCAGCAGCGGCGGCGGCGCGCCATGGCAGCAGCAGACGCCTCCGCCCCA
GCAGCAGCAGCAGCAGCCGCCGCAGCAACGCTGGGGAGCAGAGCCCTATG
GCTCACCCGGCTCGCCGCCATCAGCCAGGCCGGAAGCACCCTATGGCGAT
CCTTACAGGCGGGAGGGGCGGGGGGGGGCGCCGCCGCAGCAGTACCGGCA
GCCGCCACCGCAGCAGCAGTGGGGGCAGCAGGGACCGCCACCGCAGCAGC
AGCAGCAGCAGCCGCCGTATGGCGCGCAGATGCCGCAGCAGCCGTACTAC
GGCGGCGGCCCGCAGCAGCAGCAGCGCGGAGCGCCGCCACAGCGGCAGCC
GCCGCAGCAGCAGCCGCGGTACGACGCGTACGGGCGGCCGCTGCCCCCCG
CGCCCGGCGCCTGGGGCGGCGACGACGGCATGTACCAGGAGCAGAGGGGG
GGCTACGGGGGCGGCGGTGGCGAGTACGGAGCGCTGGTGCCTGCGGGGCG
CGGCGGCAGCAGCGCTCAGGGCGGCGGCGCGTCCGTGCGCGACACGGGGC
TGCAGCTCGTGCGCGGCGCGTGGGGGCGCCTGCTCGTCGGCAAGGACCGC
GGCGCCGCGCTGCTGTCCAGCGCGCGCGAGCGCGTGAGCGAGGGCGCCGC
GGCCGCGTCTACGGGCATCGCGTCGGCGACGTGGGCCGCGGGCGCACGCG
TGCGCGACACCGTCGGCGGCGTCACGCAGCGCGTCGGCACGCTGCTCGAC
GCCAACGGCCGCCGCGTCGACGGCCCGTACGGGCCGCCGCAGGGGGCGGG
GCCCTGGGGGGACGAGCGCTACGGCCCCCCTGGTGGCGGCGGCGGGGGCG
GGTACGATCGCGATCCGTACGGCCGCCCAGATGACCGTGGCGGTTATGCC
CCGGATGCCAGGGGGGTGTATGGGGGTCCCCCGGGGCAGTATGGGGGGGG
AGGCAGGGGGAGGGAGGCGTACCGGCCGCCGGGGGTGGCGGCGGGGGGGC
CTGCGCAGCCCCCCTACGGCGGCGACAGGTATCCGCCTCAGTATGGCGGG
GAAGTGCCGCAGCAGCAGGAGTGGCAGCAGCAGCAGCAGCGCCGTGCTGT
GCCCCCGCAGCAGCAGCAGCAGCGGTGGGGCGGGCCACCGGGCGGTCCCG
GCCGGGACAGATTTGGGGGGCAAGGGGCGCCACAACAGGGGGGGTATGGG
GGGGGCGCGCCTGCACAGGCAGGGGAGCAGGCAGGGGCTTTTGGCGGATA
TGGGGCACCGCAGGGCGCAGCAGGCGGTGGGCCATCTCAACCTTGGGGGC
AGTAA