mRNA_5285 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348907
Unique Name	mRNA_5285
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A835YW33_9STRA (Transcription factor Pcc1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW33_9STRA)

HSP 1 Score: 332 bits (851), Expect = 2.280e-113
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1

Query:   49 MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVXXXXXXXXXXXXXQAASGHAQGKEPVRSRPPATAAAESEXXXXXXXXGRAHKRPRARVAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAXXXXXXXXXXXLSAPP 690
            MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVXXXXXXXXXXXXXQAASGHAQGKEPVRSRPPATAAAESEXXXXXXXXGRAHKRPRARVAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAXXXXXXXXXXXLSAPP
Sbjct:    1 MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVXXXXXXXXXXXXXQAASGHAQGKEPVRSRPPATAAAESEXXXXXXXXGRAHKRPRARVAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAXXXXXXXXXXXLSAPP 214

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: D7FJ03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ03_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 6.500e-18
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1

Query:   61 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETG 306
            PY C  E+ +PS + A IA  ++ VD ELQPNK+ RTL ++G+ L+A+F ATEA+ LRV +S F D A++V+RT LEFD+ G
Sbjct:    4 PYHCDAEVTFPSASLATIACRTLAVDAELQPNKIIRTLRVEGSSLLAKFEATEARTLRVVLSGFYDMASVVARTFLEFDDGG 85

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A2D4BZ60_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ60_PYTIN)

HSP 1 Score: 79.3 bits (194), Expect = 9.290e-16
Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 1

Query:   52 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 300
            A  PY C++ L +P    A  A  +++VDEELQP K+ RTL ++G+ L+  F ATE ++LR +VS+F D A LVSRT+LEF +
Sbjct:    3 ATHPYECEIALSFPEAEDAQHAMMTIQVDEELQPEKIHRTLSVNGSDLIVHFEATEIRLLRAAVSSFYDMALLVSRTLLEFKD 85

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: K3WQ75_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ75_GLOUD)

HSP 1 Score: 78.6 bits (192), Expect = 1.780e-15
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 1

Query:   52 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 300
            A  PY C + L +P    AA A  ++ VD ELQP+K++RTL ++G  L+  F ATE ++LR +VS+F D   LV+RT+LEF E
Sbjct:    3 ATHPYECDISLAFPEAVDAAYALETLRVDAELQPDKITRTLAVEGTNLVVHFEATEIRLLRAAVSSFYDMGLLVARTLLEFKE 85

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A8K1CRT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRT8_PYTOL)

HSP 1 Score: 77.0 bits (188), Expect = 7.080e-15
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1

Query:   52 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 300
            A  PY C + L +P    A  A  +++VDEELQP+K+ R+L +DG  L+  F ATE ++LR +V++F D + LV+RT+LEF E
Sbjct:    4 ATHPYECDIRLSFPEAEDAEHAMLTIQVDEELQPDKIHRSLSVDGTDLIVHFEATEIRLLRAAVASFYDMSLLVARTLLEFKE 86

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A484E6M7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6M7_BRELC)

HSP 1 Score: 75.9 bits (185), Expect = 2.350e-14
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 1

Query:   40 TSKMAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEF 294
            TS  A  P+ CK+ LR+  +  A     ++EVDEELQP K+ RTL + G +L+   AATE ++LR +VS+F D + L +RT+LEF
Sbjct:    8 TSNSATLPFECKMTLRFTDKLDALYVLRTLEVDEELQPKKIIRTLTVKGTELLVHIAATEIRLLRAAVSSFYDMSMLSARTLLEF 92

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A5D6XF77_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF77_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.030e-13
Identity = 37/80 (46.25%), Postives = 56/80 (70.00%), Query Frame = 1

Query:   61 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 300
            P+ C ++L +P+   A  A  +++VD E+QP+K+ RTL +DG  L A F ATE ++LR +V++F D A LV+RT+LEF E
Sbjct:    6 PFECDVQLVFPAPLDAQYALETLQVDGEIQPDKIHRTLAVDGAALTAHFEATEIRLLRAAVASFYDMALLVARTLLEFKE 85

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: V9EW72_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=V9EW72_PHYPR)

HSP 1 Score: 73.9 bits (180), Expect = 1.060e-13
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 1

Query:   52 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 300
            A  P+ C++ L +P E  A     ++EVDEELQP K+ RTL + G +L   F ATE ++LR +VS+F D + L +R +LEF E
Sbjct:    4 AKHPFECEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEFKE 86

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A3F2S3U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3U4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.900e-13
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 1

Query:   61 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 300
            P+ C + L +P E  A     ++EVDEELQP+K+ RTL + G +L   F ATE ++LR +VS+F D   L +RT+LEF E
Sbjct:    7 PFECDVCLTFPEEVDAQYVLQTLEVDEELQPDKIHRTLSIKGAELHVHFEATEIRLLRAAVSSFYDMGLLTARTLLEFKE 86

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BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: W2PBF0_PHYPN (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PBF0_PHYPN)

HSP 1 Score: 75.1 bits (183), Expect = 3.340e-13
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 1

Query:   40 TSKMAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 300
            T   A  P+ C++ L +P E  A     ++EVDEELQP K+ RTL + G +L   F ATE ++LR +VS+F D + L +R +LEF E
Sbjct:   89 TMDSATHPFECEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEFKE 175

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348907 vs. uniprot

BLAST of jgi.p|Trimin1|348907 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YW33_9STRA	2.280e-113	100.00	Transcription factor Pcc1-domain-containing protei...	[more]
D7FJ03_ECTSI	6.500e-18	52.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A2D4BZ60_PYTIN	9.290e-16	48.19	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
K3WQ75_GLOUD	1.780e-15	46.99	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A8K1CRT8_PYTOL	7.080e-15	45.78	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A484E6M7_BRELC	2.350e-14	45.88	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A5D6XF77_9STRA	1.030e-13	46.25	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
V9EW72_PHYPR	1.060e-13	44.58	Uncharacterized protein n=4 Tax=Phytophthora TaxID...	[more]
A0A3F2S3U4_9STRA	2.900e-13	46.25	Uncharacterized protein n=2 Tax=Phytophthora kerno...	[more]
W2PBF0_PHYPN	3.340e-13	43.68	Uncharacterized protein n=5 Tax=Phytophthora paras...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_32	contig	Contig_32:940676..944693 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348907\|estExt_Genemark1.C_Ctg_320126
BRITE	ko00000,ko03016
KEGG ko	ko:K15902
Description	Transcription factor Pcc1
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2CYNW@1\|root,2S5DA@2759\|Eukaryota
Evalue	7.32e-19
Seed ortholog	2880.D7FJ03
Hectar predicted targeting category	other localisation
Ec32 ortholog description	CTAG/Pcc1 family
Ec32 ortholog	Ec-07_004940.1
TranscriptId	349229
Track	FilteredModels1
ProteinId	348907

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348907	gene_5285	Tribonema minus UTEX_B_3156	gene	Contig_32 940676..944693 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348907	Trimin1\|348907\|estExt_Genemark1.C_Ctg_320126	Tribonema minus UTEX_B_3156	polypeptide	Contig_32 940724..944693 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5285_1	exon_5285_1	Tribonema minus UTEX_B_3156	exon	Contig_32 940676..940746 +
exon_5285_2	exon_5285_2	Tribonema minus UTEX_B_3156	exon	Contig_32 941300..941428 +
exon_5285_3	exon_5285_3	Tribonema minus UTEX_B_3156	exon	Contig_32 942265..942413 +
exon_5285_4	exon_5285_4	Tribonema minus UTEX_B_3156	exon	Contig_32 944350..944693 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_5285	UTR5_5285	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_32 940676..940723 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5285	CDS_5285	Tribonema minus UTEX_B_3156	CDS	Contig_32 940724..940746 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_32:940676..944693+
coding sequence from alignment at Contig_32:940676..944693+

spliced messenger RNA

>mRNA_5285 ID=mRNA_5285|Name=jgi.p|Trimin1|348907|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_32:940676..944693+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGAAGCTTGTGGCGCTCTCCGCTCCCGGTCTGCGGGGCAACCTCCAAGAT
GGCGGCGCGGCCGTACGTGTGCAAACTGGAGCTGAGGTACCCGTCTGAAG
CGACTGCGGCCATTGCCAAGGCATCCATGGAGGTGGACGAGGAGCTGCAG
CCAAACAAAGTCAGCAGGACATTGGAGCTGGACGGAAACAAACTCATGGC
GCAATTTGCTGCGACAGAGGCCAAGGTGCTGCGCGTGTCAGTGAGCACAT
TCTGTGACACGGCAGCGCTCGTCTCAAGGACCATGCTGGAGTTTGACGAG
ACTGGCGGCAGCGGCTCCACTGCAGTGGCGGCAGCAGCAGCTGCGAGCGC
GGCGGCGCCGGCGGCGCAGGCAGCATCAGGGCACGCGCAAGGAAAGGAGC
CCGTTCGGAGTCGCCCACCAGCAACCGCGGCAGCAGAATCGGAGGCAGCG
GCGCGTCCGACCGCAACAGGGCGAGCGCACAAACGGCCGCGCGCCCGTGT
CGCGGGCAGCGTCGCCGCCACCAGCTTCGTCCCTGCTGGCGGCACAGGCC
GCGGCGATGCCAGCAACGGCGGCGGCGTGCAGCTGCAGCTGCACAATGCG
CGCGACCTGCAGGAGGTGCATTGGGTGACCATGGCAAACGCGGCGGAGGC
GGCGGAGGCGGCGGCGGCGGCGGCGCTGTCTGCCCCACCGTGA

protein sequence of jgi.p|Trimin1|348907

>Trimin1|348907|estExt_Genemark1.C_Ctg_320126 ID=Trimin1|348907|estExt_Genemark1.C_Ctg_320126|Name=jgi.p|Trimin1|348907|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=215bp
MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLM
AQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVAAAAAAS
AAAPAAQAASGHAQGKEPVRSRPPATAAAESEAAARPTATGRAHKRPRAR
VAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAAE
AAEAAAAAALSAPP*

mRNA from alignment at Contig_32:940676..944693+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5285 ID=mRNA_5285|Name=jgi.p|Trimin1|348907|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4018bp|location=Sequence derived from alignment at Contig_32:940676..944693+ (Tribonema minus UTEX_B_3156 )
TGAAGCTTGTGGCGCTCTCCGCTCCCGGTCTGCGGGGCAACCTCCAAGAT
GGCGGCGCGGCCGTACGTGTGGTACGTAAAACCACTGATTGACTCGTGAA
AGTCGGCTGATGCGTGTGTAAGACACCATACACATACCCTCATGTTGACT
CTCGGGGCTTGCAGCTCTCGCTCGTCGAACTGGCCCCTCGGGTGCACTGC
TTGTGCCATCTGATTTAGTTTCTGCTGATATGCATTCGATGAATCATGAC
TGGTGACCAAATCATACAGCAGTGCAAGGAAGTTGGCAGCGCACAGAATG
CTCTTCTTACCCAGCTGTGCTGTAGATTTATGAAGCATTCAATTCAAGCA
TGCCCAATGAAGAAATGCATCACTTGACGATCTGTGCATTTGTGCCAGTG
TAGATGAGGCATGATGCATTCGATGTTGACAGCCTTGTTGGCGGTTGAGC
ACTGTAGGCCATGAGGCGATGCCCAATGTCAGCAACGCCATGCTCAAGAA
ACGGAATCCAGTTGAGAGCTTATAATGTATTGTTGCTTTCGATAGTGCTG
TAGCAACAGTGGGTAGTAGATATCACAATTGCCACTGGGCTTACGTCATC
TACTCTTTCCCGTGGCTTCTGCAGCAAACTGGAGCTGAGGTACCCGTCTG
AAGCGACTGCGGCCATTGCCAAGGCATCCATGGAGGTGGACGAGGAGCTG
CAGCCAAACAAAGTCAGCAGGACATTGGAGCTGGACGGAAACAAACTCAT
GGCGTAAGTGGTGTGCATGTGGCCCTCCTGCTTTGTGTACCTACTCTTCG
TCATCCGAAGAACTTCAAGAGTACAAGACTTTCCATTTCAATACTTCCGC
ATTTCTGGTAATAAGACCTGGCGATAGCCACGGCTTTGGATGCAGATAAA
ACACATGCGTATATGCAGCAGCGCCAATGCGGTGCACCGTTTGAATGACA
GCGTTTGCACGTCTCAAGCACTTCTTGTTAAGCAGGTTCAATGCACTACT
GTAGAAAGGTGCATGAAGCGGAGGGATCCATGGCCCTCTGCGCAATTGGC
ACTGTCATGATGGTGATGATGCCTGCAGTACATGCATAGCTCACACCCTG
CAGCGGGACCGAAGTAGACACCAGGTCTCCAGCTAGTGCATCAGTTGCGT
GATCAGCACATGGAGCATAAGCCAAGGCGTCAATAGGCAAATCAGTCGCT
TGTCAAGGACTCTGACAATATCAGCAGAGTACGAGTGAATGACATGATCG
CACCCACACACAGCAAGAGCGTTTTGACCTGTTCTCACAGGACCAGACGA
CAGGACTCCAGTTGCAGCACCAGTGTTGCTCAGCACAGGTTGACCGCAGT
CGTGGCTCTCATGTTCGACATGTAGGGCATTCGAACTTGCTCCGAGCTTC
TTGTGCTTGACATTCCCTAGGCGCAGATGCCAGTCACGGGCGTACCGCTC
TGTATAGTCAGTTCTGATAATACCTGCGCAACAGCTGCACGCCAGAGTCC
TTGTTAGTATGACCTGATGTTGTGTTGACCATCTTGCTGCATCGATGGTT
TCGTCTGTCATTGTCTTCATCTCATCTGTGCACATGCAGGCAATTTGCTG
CGACAGAGGCCAAGGTGCTGCGCGTGTCAGTGAGCACATTCTGTGACACG
GCAGCGCTCGTCTCAAGGACCATGCTGGAGTTTGACGAGACTGGCGGCAG
CGGCTCCACTGCAGTGGCGGCAGCAGCAGCTGCGAGCGGTAGCTGAACAC
AGACGTTCCGTTCGCACAGCAGGCCTCTGAAGTGACAACTTGAAACCCTA
CCAGCAGTCACCTCAGCTTGCACTTCATCCAAATGGTGGAGGTGTAATGG
TGGCTAATTGCTGCCCTAGCACTTGTCAGCACCAACCATTTGCTCAGGGA
CGCGAGAATGGGCAAGAGGGTGTTGTAGGTCAACTGGTGCAAGGCTTCAA
GAAGTTCATGCTGAACTCTGGGCCGTGCCCAGTGCACACACAGCATGTAT
GCGCCATCAGCAACGGTTCTTTGCTAGCACACATACTTGGCACTGGTCTC
TGATACGCATTGGTCGCTTTAGGTGCAGCGTCAGTAGCAGTGACTTGTGT
TGCCAATTTGTGCGGCGGCATCAGCACTGAGTCTCTCGCCCGACGACAGC
TGTGCCATGAGCCTGTCCTCAGAACGCGCAGTGCTGCGCTACTGCTGTGT
CATGGAACAGATAATCACACCAGGCACCGGCAGCAACCCCGCCATTTATC
GTGTGTGTGTTGATGTGGTGCTGCTTCTCTGCCTCTGTTGTCAACGATGA
TCGCCAGATTACGGAGAGAAGAGAGAGAGAGAAAGAGAGAGTGTGTGTGT
ATGTACTGCAGCAGGGCCAACCACCGCAGCTCCGTGCACTTCTCACACAG
TTGGAACTCACACAGTTGGAAGTGTTTGGCGTGGTCTTTCATTACGTTGA
CACGGCTAGCGCTGAGCAGTGATGGGAGGCCTGTGTCAAAGCCACGTTGC
AACCATCTGCCATCTCAACTGCTGTGCGCATGACAATCTCGCAGTGCTAT
CATGGCAATGACTGCAGATGTCAACGCAACAAATCGTGCATGTATGCAGT
AGGAAGATCCGCATACACAATGCATTGCCCAACCCATGCGTCTTGTCAAC
GCACACCAATACTTCTGACAACACATACACACTTCAAACTTGCAGCAGCA
TTGTGCACAGGAGTCGCTACACACTTCAAGTACCCGATGTAACGGCGCTG
CGCTCGGGGTCTCTCGTCTCATGCTGAGCTGATGTGGGGTGGAGGTGGGT
GTGGTATATTGCAAACCGACATGTAGGTATTTGTGGTATGACCATCAGAG
TGCGGCGCACTGCTCGCCCTAGATGCGTTAGCTTCGCATGCTCCTATGCT
CACTACTTCCCCTGTGTAGATGTATATATACTCTACACCTCACCTGCTGG
TACACCCAGTCTCTCGCTCACTGCAAGTGTCCCTCATGGTGCAGCAGCCA
CAAAGTGATAGTACTGCTGCAGTTGGAGCGGACGCGTTTCAAGGCACCAT
CGAAAACCACGTTCTGCTCTTCGGCTTCCAGCTCTGCGTTGCTAAATCTC
GCGCATTACCAGCCGGCCGCGTGCTAGAAGGTGATCTTAGACGATATTTT
CTGCCAACCGGAGATGGCTGACTGGCACAGTTGTATCGCCGCCTCTGTTG
AGATCGTTGAGGTCCTGTGTTCGAGTTTGCCCTCTGGCCACCCTAATAAA
CCTTGTTTTTCGTTTTGCACGCGTCGTGTCATTCTGCTCTAGGAAGGGTT
CATCCTTCTGTGCTGACGCCGATACTTTGTGCTGTGAGGCGCCTGTGAAT
TTTATTGCATAGAAAGCAAGTATTACACATGCATCCTTGTCAGGTCTCAG
GCTGGCAACAAAAGGTTGATTGAAATTCCACTTGTTCAATTTGCCATCAT
AGGGGTGCAGTGCGCCAGTTGAGCCGGCCGCTGTGCTGCCAAGAGCTGCC
CCCCTGGCCAGGTAACACGAAGGTGCATTTCAGTGAATCTCAGGTTGTCC
GCAGGGATATTACCAATGCCTTGGGTTCAGGTAGCCTGAATCAGATCATC
ACATTTGCGGCGGGTCAAACTGTCGTCAACACAAGCGCCATGCGCCTGCA
CATGCTGCGTGGCGCCGTGCGCAGCGGCGGCGCCGGCGGCGCAGGCAGCA
TCAGGGCACGCGCAAGGAAAGGAGCCCGTTCGGAGTCGCCCACCAGCAAC
CGCGGCAGCAGAATCGGAGGCAGCGGCGCGTCCGACCGCAACAGGGCGAG
CGCACAAACGGCCGCGCGCCCGTGTCGCGGGCAGCGTCGCCGCCACCAGC
TTCGTCCCTGCTGGCGGCACAGGCCGCGGCGATGCCAGCAACGGCGGCGG
CGTGCAGCTGCAGCTGCACAATGCGCGCGACCTGCAGGAGGTGCATTGGG
TGACCATGGCAAACGCGGCGGAGGCGGCGGAGGCGGCGGCGGCGGCGGCG
CTGTCTGCCCCACCGTGA

Coding sequence (CDS) from alignment at Contig_32:940676..944693+

>mRNA_5285 ID=mRNA_5285|Name=jgi.p|Trimin1|348907|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=645bp|location=Sequence derived from alignment at Contig_32:940676..944693+ (Tribonema minus UTEX_B_3156 )
ATGGCGGCGCGGCCGTACGTGTGCAAACTGGAGCTGAGGTACCCGTCTGA
AGCGACTGCGGCCATTGCCAAGGCATCCATGGAGGTGGACGAGGAGCTGC
AGCCAAACAAAGTCAGCAGGACATTGGAGCTGGACGGAAACAAACTCATG
GCGCAATTTGCTGCGACAGAGGCCAAGGTGCTGCGCGTGTCAGTGAGCAC
ATTCTGTGACACGGCAGCGCTCGTCTCAAGGACCATGCTGGAGTTTGACG
AGACTGGCGGCAGCGGCTCCACTGCAGTGGCGGCAGCAGCAGCTGCGAGC
GCGGCGGCGCCGGCGGCGCAGGCAGCATCAGGGCACGCGCAAGGAAAGGA
GCCCGTTCGGAGTCGCCCACCAGCAACCGCGGCAGCAGAATCGGAGGCAG
CGGCGCGTCCGACCGCAACAGGGCGAGCGCACAAACGGCCGCGCGCCCGT
GTCGCGGGCAGCGTCGCCGCCACCAGCTTCGTCCCTGCTGGCGGCACAGG
CCGCGGCGATGCCAGCAACGGCGGCGGCGTGCAGCTGCAGCTGCACAATG
CGCGCGACCTGCAGGAGGTGCATTGGGTGACCATGGCAAACGCGGCGGAG
GCGGCGGAGGCGGCGGCGGCGGCGGCGCTGTCTGCCCCACCGTGA