mRNA_5256 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|164657
Unique Name	mRNA_5256
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 1264 bits (3271), Expect = 0.000e+0
Identity = 670/670 (100.00%), Postives = 670/670 (100.00%), Query Frame = 1

Query:    1 MSSAELPRPSDVCLPAKLYSLTRVCIGSASGKGVPLFALCQQATDHIAYTSLLLPQVTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRGPMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAHTTD 2010
            MSSAELPRPSDVCLPAKLYSLTRVCIGSASGKGVPLFALCQQATDHIAYTSLLLPQVTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRGPMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAHTTD
Sbjct:    1 MSSAELPRPSDVCLPAKLYSLTRVCIGSASGKGVPLFALCQQATDHIAYTSLLLPQVTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRGPMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAHTTD 670

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BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 706 bits (1821), Expect = 2.970e-246
Identity = 418/670 (62.39%), Postives = 471/670 (70.30%), Query Frame = 1

Query:  169 VTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQ---RESSDPASLSR---------GFGFINFEDHEAAESAVSEMNGKTV-SGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGN-SKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQ------------------------------GNFKYTQQVRN--PPAQGQAPQMG----------GMXXXXXXXXXXXXXXQA--ESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            + P+HSASLYVGDL+ D+ E+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD  CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATDDAG SKGYGYVHYE   SAN AIAKI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G + S K+Q   +E     S  +         GFGF+NFE+HE+A  A+  +N   +  G    T  L+C RAQK++ER RELQ+K++ +K+ERMNK+QGVN+YVKNLDE V E A+REAFA  GTITS R+M D    N SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ+ GG+ PRG PM     GMYGM  PY M  QPG MPQ PR     MMPQMM PRG PRG    M  Y GRG YPMPAYA    P QQ          G PQ  +  G  QQ                              GNFKYTQ VRN  P A    PQ            G  XXXX          A  ESL+A ALAAA PE QKNMIGERLYPLI+E QP LAGKITGMLLEMDNGELLHLLESPDSL AKI EALQVL  H
Sbjct:   36 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTT--LYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGM--PYWMGAQPG-MPQQPRQF---MMPQMM-PRG-PRG---PMPAYGGRGNYPMPAYAT---PGQQQQMP------GQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEH 683

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BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 670 bits (1728), Expect = 6.590e-233
Identity = 394/623 (63.24%), Postives = 457/623 (73.35%), Query Frame = 1

Query:  172 TPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKV--ATDD--AGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQ-------RESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQA-LAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            TPFHSASLYVGDLAPD++E+ LFEIFN VGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMN+TLIK  PCRIMWSQRDPS+RRSGVGN+FVKNLD ++DNKALYDTFSLFGNILSCKV  A DD  +   +GYGYVHYETAE+ANEAIAKI+GM++ GK+V+VGHFV+R DRA  +DWTN+Y+KNIP  W EEKL  EF KFG + SVK          E + P  ++ G+GF+N+ DHE+A  AV  MNG  +  P  E RE++  RAQK+ ER+REL+AK+E+LK ER+NKYQGVNLYVKNLD+++ +  LRE F   GTITS R+M+D+  GNS+GFGFVC+S+PEEATKAV E N +++  KP+Y+ALAQR+EVRRAQLEAQYA+  GGL PRG P+G  QPGMYG    Y MP   G  PQ  R  GYPMMP MM                        PAYAMG  P+QQXXXXXX  SG        GG P+ G  +  QQ   P         G M   XXXXXXXXXXX        A LAAA+PE QKNMIGERLYPLI +SQPELAGKITGMLLEMDNGELLHLLESP++L  KI EAL VLE H
Sbjct:   10 TPFHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGEEREMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDS-NGNSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLG--QPGMYGAMPMYAMPPGQGIPPQASR--GYPMMPAMMXXXXXXXXXXXXXX----XXXXXXPAYAMG--PLQQXXXXXXXXSGRXXXXXXGGGAPRVGGQQPGQQQVRP---------GAMPVPXXXXXXXXXXXXXXXXXXXAALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQH 612

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BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 662 bits (1707), Expect = 6.570e-230
Identity = 372/612 (60.78%), Postives = 434/612 (70.92%), Query Frame = 1

Query:  175 PFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRGPMGAMQPGMYGMG-MPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMG-AMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPA-QGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            PFH+ASLYVGD+ PD+TE+ LFEIFN VGPVASIRVCRD +TRRSLGYAYVNFHNVADAERALDTMNFT IK  PCRIMWSQRDPS+R+SGVGN+FVKNLD +IDNKALYDTFSLFGNILSCKVA D  GNSKGYGYVHYETAE+ANEAIAKI+GM++ G +V+VGHF +R +R    +WTN YVKNIP  W EE++R EF  FGT+ S+ + +++   A   +GFGF+NFE  E A  AV  +NGK    P     EL+  RAQKR+ER+REL+ K+E LK+ER++KYQGVNLYVKNLD+ + +  LREAF + GTITS RIM+D   G S+GFGFVCFS+PEEA KAV EMN ++++ KP+YVALAQRKEVRRAQLEAQ+AQ+ G +G   PMG  QP MYG   M Y  P Q      PP+A    + PQ M P                      P Y     MP+Q          G  P   QAG    + NFKYT  VRN P  +G AP                     E LT+ ALAAASPE QKNMIGERLYPLIH  QPELAGKITGMLLEMDNGELLHLLESP++L+AKIQEA+QVLEAH
Sbjct:   24 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVMKDAG--AEHHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRDTA-GVSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMGRGIPMG--QPPMYGAAPMFYAQPNQ-----LPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGYMPAYGMPMQPRGQPRGRRQGPGPAGPQAGAPVNRRNFKYTANVRNQPRPEGVAPGAPAPGVMPPAAPVQPGVPHLEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAH 625

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BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 662 bits (1708), Expect = 2.200e-229
Identity = 392/638 (61.44%), Postives = 454/638 (71.16%), Query Frame = 1

Query:  130 TDHIAYTSLLLPQVTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQR--GGLGPRGPMGAMQPGMYGMG-MPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGA-PRGGPNSMQP-YPGRGT-YPMPAYAMGAMPVQQXXXXXXGAS----GGAPQQAQAGGVPQQGNFKYTQQVRN-PPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAHTTD 2010
            T  +A  +      TPFH+ASLYVGD+ PD+TE+ LFEIFN VGPVASIRVCRD +TRRSLGYAYVNFHNV+DAERALDTMN+T IK  PCRIMWSQRDPS+R+SGVGN+FVKNLD +IDNKALYDTFSLFGNILSCKVA D  GNSKGYGYVHYETAE+A EAIAKI+GM++ G +V VGHF +R DR    +WTN YVKNIP  WD+  LR EF  FG I+S  + +++S  +  +RGFGF+NFE+ EAA  A  ++N K VS       EL+  +AQKR+ER+REL+ K+EALK+ER+NKYQGVNLYVKNLD+ + +  LREAFA  GTITS RIM+D   GNS+GFGFVCF++PEEATKAV EM+ ++++ KPIYVALAQRKEVRRAQLEAQ+AQQR  G +  RG M   QP MYG   M Y  P Q      PP+A    + PQ M PRG  PRG     QP  PG    Y MP           XXXXXX        G P QA       + NFKYT   RN PP Q   PQ  G               Q E LT+ ALAAASP MQKNMIGERL+PLIH SQPELAGKITGMLLEMDNGELLHLLESPD+L AKI EAL VLEAH ++
Sbjct:   55 TSPVANNTAPATSATPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVMKDAS--SEQNRGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRDPA-GNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRG-MPMQQPPMYGAAPMFYAQPNQ-----MPPQARQGFVYPQQMMPRGGLPRGPIPYRQPGVPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQPPVQEPVPQQPG------------GIPQMEPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSE 671

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BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: F0W707_9STRA (Polyadenylate-binding protein n=2 Tax=Albugo TaxID=65356 RepID=F0W707_9STRA)

HSP 1 Score: 656 bits (1692), Expect = 6.420e-227
Identity = 373/618 (60.36%), Postives = 438/618 (70.87%), Query Frame = 1

Query:  169 VTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGG-LGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGA----PRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPA-QGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            V PF +ASLYVGD+ PD+TE+ LFEIFN VGPVASIRVCRD +TRRSLGYAYVNFHN+ DAERALDTMNFT IK  PCRIMWSQRDPS+R+SGVGN+FVKNLD +IDNKALYDTFSLFGNILSCKVA D  G SKGYGYVHYETAE+A EAI KI+GM++ G +V VGHF +R +R    DWTN YVKN+P  W +  LR EF  FG +NS  + ++ +  ++ +RGFGF+N+ED + A +AV  ++GKT  G      EL+  +AQKRTER+REL+ K++ LK+ER+NKYQGVNLYVKNLD+ + +  LREAF   GTITS R+M+D+ TGNS+GFGFVCFS+PEEA  AV EMN +++  KP+YVA AQRKEVRRAQLEAQ+AQ+  G L  RG PMG  QP MYG  M Y  P Q   MP   R   Y M PQ M PRG     P G    M   PG   + M  Y M   P+QQ      G     P  A   G+P + NFKYT   RN P+ +G    M G                 E LT+ ALAAASPE QKNMIGERLYPLIH  Q ELAGKITGMLLEMDN ELLHLLESPD+L +KIQEA+QVLEAH
Sbjct:   70 VQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKALYDTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPN--SATNRGFGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDS-TGNSRGFGFVCFSTPEEAATAVAEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMPMG--QPPMYGAPMFYAQPNQ---MPMQGRQA-Y-MYPQQMLPRGVHPRVPFGFGGRMPGAPGPAGFSMAGYGM---PMQQQRQPRRGRQVPGPAGA-PNGMPNRRNFKYTTGARNHPSREGLGNNMSGGVMPQGSSTPMGGAPALEPLTSAALAAASPEAQKNMIGERLYPLIHRQQNELAGKITGMLLEMDNSELLHLLESPDALDSKIQEAIQVLEAH 673

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BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 655 bits (1689), Expect = 1.710e-226
Identity = 384/619 (62.04%), Postives = 444/619 (71.73%), Query Frame = 1

Query:  175 PFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDA-GNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTV-SGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGL--GPRGPMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQG------NFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            PFH+ASLYVGD+ PD+TE+ LFEIFN VGPVASIRVCRD +TRRSLGYAYVNFHNVADAERALDTMNFT IK  PCRIMWSQRDPS+R+SGVGN+FVKNLD +IDNKALYDTFSLFGNILSCKVA D   GNSKGYGYVHYETAE+A EAIAKI+GM++ G +V VGHF +R DR    DWTN YVKNIP  W +  L  EF  FG + S  + +++++P   +RGFGF+N+ED E+A  AV  +NGK+  +G  +ET E++  +AQKR+ER+REL+ K+E LK+ER+NKYQGVNLYVKNLD+ + +  LREAFA  GTITS R+M+D   GNS+GFGFVCFS+PEEA KAV EMN ++++ KP+YVALAQRKEVRRAQLEAQ+AQQR G+  G   PMG  QP MYG     M  GQPG MP   R G   M PQ M PRG  RG      P P     P             XXXXXX                 QG      NFKYT   RN PA+  AP  G M                E LT+ ALAAASPE+QKNMIGERLYPLIH  QPELAGKITGMLLEMDNGELLHLLESP++L+AKIQEAL VLEAH
Sbjct:   74 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVMKDNANPEQ-NRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLET-EMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRDP-NGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMG--QPPMYGAAP--MFYGQPGQMPPQARQGF--MYPQQMMPRGVQRG------PIPYGARVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHPAR-DAPPQGVMPPAAPVQNAGP-----EPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAH 671

[Close]

BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 651 bits (1680), Expect = 9.560e-226
Identity = 380/613 (61.99%), Postives = 439/613 (71.62%), Query Frame = 1

Query:  175 PFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDA-GNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVS-GPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGL--GPRGPMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            PFH+ASLYVGD+ PD+TE+ LFEIFN VGPVASIRVCRD +TRRSLGYAYVNFHNVADAERALDTMNFT IK  PCRIMWSQRDPS+R+SGVGN+FVKNLD +IDNKALYDTFSLFGNILSCKVA D   GNSKGYGYVHYETAE+A EAIAKI+GM++ G +V VGHF +R DR    DWTN YVKNIP  W +  L  EF  FG + S  + +++++P   +RGFGF+N++D ++A  AV  +NGK    G  VET +++  +AQKRTER+REL+ K+E LK+ER+NKYQGVNLYVKNLD+ + +  LREAF   GTITS R+M+D   GNS+GFGFVCFS+PEEA KAV EMN +++  KP+YVALAQRKEVRRAQLEAQ+AQQR G+  G   PMG  QP MYG     M  GQPG MP   R G   M PQ M PRG  RG        PG                  XXXXXX            G    + NFKYT   RN PA+   PQ G M                E LT+ ALAAASPE+QKNMIGERLYPLIH  QPELAGKITGMLLEMDNGELLHLLESP++L+AKIQEAL VLEAH
Sbjct:   33 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKALYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVMKDNANP-DQNRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVET-DIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRDP-NGNSRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPMG--QPPMYGAAP--MFYGQPGQMPPQARQGF--MYPQQMMPRGVQRGPIPYGARVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHPAREMPPQ-GVMPPAAPVQNAGP-----EPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAH 630

[Close]

BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD)

HSP 1 Score: 640 bits (1651), Expect = 2.190e-221
Identity = 375/617 (60.78%), Postives = 434/617 (70.34%), Query Frame = 1

Query:  175 PFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDA-GNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGL--GPRGPMGAMQPGMYGMG-MPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGA----PRGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            PFH+ASLYVGD+ PD+TE+ LFEIFN VGPVASIRVCRD +TRRSLGYAYVNFHNVADAERALDTMNFT IK  PCRIMWSQRDPS+R+SGVGN+FVKNLD +IDNKALYDTFSLFGNILSCKVA D+  G SKGYGYVHYETAE+A+EAIAKI+GM++ G +V VGHF +R DR    DWTN YVKNIP  W +E L  EF  FG + S  I R++   A L+RGFGF+NFE+ E A  AV  +NGK          EL+  +AQKR+ER+REL+ K+E LK+ER+NKYQGVNLYVKNLD+ +++  LREAFA+ GTITS R+M+D   GNS+GFGFVCFS+PEEA KAV EMN ++++ KP+YVALAQRKEVRRAQLEAQ+A QR GL  G   PMG  QP MYG   M Y  P Q      PP+A    + PQ M PRG                                    XXXXXX          Q  G   + NFKYT  VRN P +  AP  G                  E LT+ ALAAASP++QKNMIGERLYPLIH  QPELAGKITGMLLEMDNGELLHLLESP++L+AKIQEA+QVLEAH
Sbjct:   28 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDNTTGASKGYGYVHYETAEAAHEAIAKINGMLIAGTEVFVGHFQKRQDRPDIDDWTNCYVKNIPSQWSDEDLLKEFKPFGPVLSAVIMRDAD--AELNRGFGFVNFEESEGAHKAVEALNGKVYQTADGSDLELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRDQ-NGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLPMG--QPPMYGAAPMFYTQPNQ-----MPPQARQGFVYPQQMLPRGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGPGAVNRRNFKYTANVRNQPPREGAPAPGAPPAAPVQVGGP------EPLTSAALAAASPDVQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAH 628

[Close]

BLAST of jgi.p|Trimin1|164657 vs. uniprot
Match: A0A1Z5JE42_FISSO (Polyadenylate-binding protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JE42_FISSO)

HSP 1 Score: 640 bits (1651), Expect = 7.270e-221
Identity = 379/659 (57.51%), Postives = 449/659 (68.13%), Query Frame = 1

Query:  178 FHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATD-DAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQ---RESSDPASLSR-------------------------GFGFINFEDHEAAESAVSEMNGK----TVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGP----RGPMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMM-GPRGAP----RGGPNSMQPYPGRGTYPMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGG------VPQQGNFKYTQQVRN---PPAQGQAPQMGGMXXXXXXXXXXXXXXQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 2001
            F + SLYVGDLAPD+ ES LFEIF+ +GPVASIRVCRD +TRRSLGYAYVNFH +ADAERALDTMNF++IK  PCRIMWSQRDPS+RRSGVGN+FVKNL E+IDNK LYDTFSLFGNILSCKV TD + G SKGYGYVHYETAE+AN AI K+ GM++ G++V VGHF+RRNDR     WTN YVKNIP  WD+ +L  EFA+FG + S  +    R+   PAS ++                         GFGF+NF DH+ A +A   +NGK     V G  + T+EL+  RAQK++ER+REL++K+EA K++R+ K+QGVNLYVKNLD++V +  LRE FAT GTITS R+M+D     S+GFGFVC+S+PEEA +AV E+N +++A+KPI+VALAQR+EVRRAQLEAQ+A + GG G     RGPMG    G  GM   YM    PGG  QP     YPMMPQM+ G RGAP    R G   M    GRG YPMP YA G M  Q       G  G AP Q            P Q   K+ QQ RN   PP  GQ                       +SLTA ALA+A+PEMQKNMIGERLYPLIH+SQPELAGKITGMLLEMDN ELLHLLESPD+L +KI EALQVLEAH
Sbjct:   31 FRTPSLYVGDLAPDVNESLLFEIFSALGPVASIRVCRDAVTRRSLGYAYVNFHQMADAERALDTMNFSMIKSKPCRIMWSQRDPSLRRSGVGNIFVKNLHESIDNKQLYDTFSLFGNILSCKVVTDRETGGSKGYGYVHYETAEAANAAIEKLHGMLIDGQEVQVGHFMRRNDRPDVNAWTNCYVKNIPYEWDDNRLEQEFAQFGEVISAAVSKGVRKVKKPASETKEGEEEPVPEDEPKEGENAAKKEESLGFGFVNFADHQDALAACENLNGKEYTTVVDGEEI-TQELYVGRAQKKSERERELRSKFEAEKMDRIAKFQGVNLYVKNLDDSVTDEILREEFATVGTITSARVMRDPKDNRSRGFGFVCYSTPEEANRAVGELNGKLIANKPIFVALAQRREVRRAQLEAQHANRVGGPGQPGMMRGPMGGPM-GYPGMAPMYMQRPGPGGAMQP----AYPMMPQMIAGGRGAPQQQQRAGVYPMLGQQGRGGYPMP-YA-GVMQGQPGR----GGRGVAPVQGXXXXXXXXTPAPGQQPIKFNQQARNAGGPPMHGQP-----------------AGQPPQSLTASALASATPEMQKNMIGERLYPLIHQSQPELAGKITGMLLEMDNSELLHLLESPDALISKISEALQVLEAH 660

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|164657 vs. uniprot

BLAST of jgi.p|Trimin1|164657 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YVH9_9STRA	0.000e+0	100.00	Polyadenylate-binding protein n=1 Tax=Tribonema mi...	[more]
D8LTD5_ECTSI	2.970e-246	62.39	Polyadenylate-binding protein n=2 Tax=Ectocarpus T...	[more]
A0A7S2V0G2_9STRA	6.590e-233	63.24	Polyadenylate-binding protein n=2 Tax=Fibrocapsa j...	[more]
A0A2D4BDJ5_PYTIN	6.570e-230	60.78	Polyadenylate-binding protein n=2 Tax=Pythium TaxI...	[more]
A0A6G0WN78_9STRA	2.200e-229	61.44	Polyadenylate-binding protein n=2 Tax=Aphanomyces ...	[more]
F0W707_9STRA	6.420e-227	60.36	Polyadenylate-binding protein n=2 Tax=Albugo TaxID...	[more]
A0A6A3LR95_9STRA	1.710e-226	62.04	Polyadenylate-binding protein n=5 Tax=Phytophthora...	[more]
M4B4S0_HYAAE	9.560e-226	61.99	Polyadenylate-binding protein n=19 Tax=Peronospora...	[more]
K3X8Z0_GLOUD	2.190e-221	60.78	Polyadenylate-binding protein n=2 Tax=Pythiaceae T...	[more]
A0A1Z5JE42_FISSO	7.270e-221	57.51	Polyadenylate-binding protein n=2 Tax=Fistulifera ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_32	contig	Contig_32:749151..758735 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|164657\|e_gw1.32.191.1
BRITE	ko00000,ko00001,ko03019,ko03041
KEGG Pathway	ko03013,ko03015,ko03018,map03013,map03015,map03018
KEGG ko	ko:K13126
GOs	GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003727,GO:0003729,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005840,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006446,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008428,GO:0009889,GO:0009894,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010608,GO:0015031,GO:0015833,GO:0015931,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031326,GO:0031329,GO:0031503,GO:0032268,GO:0032991,GO:0033036,GO:0034248,GO:0034613,GO:0035770,GO:0036464,GO:0042886,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051641,GO:0051649,GO:0060211,GO:0060255,GO:0061013,GO:0065007,GO:0065009,GO:0070717,GO:0070727,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0097159,GO:0098772,GO:1900151,GO:1901363,GO:1903311,GO:1990841,GO:1990904,GO:2000112
Preferred name	PAB1
Description	RNA binding
COG category	J
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG0123@1\|root,KOG0123@2759\|Eukaryota
Evalue	4.87e-247
Seed ortholog	2880.D8LTD5
Hectar predicted targeting category	other localisation
Ec32 ortholog description	poly(A) binding protein
Ec32 ortholog	Ec-02_005930.1
TranscriptId	164979
Track	FilteredModels1
ProteinId	164657

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|164657	gene_5256	Tribonema minus UTEX_B_3156	gene	Contig_32 749151..758735 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|164657	Trimin1\|164657\|e_gw1.32.191.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_32 749151..758735 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5256_9	exon_5256_9	Tribonema minus UTEX_B_3156	exon	Contig_32 749151..749567 -
exon_5256_8	exon_5256_8	Tribonema minus UTEX_B_3156	exon	Contig_32 751157..751332 -
exon_5256_7	exon_5256_7	Tribonema minus UTEX_B_3156	exon	Contig_32 752157..752346 -
exon_5256_6	exon_5256_6	Tribonema minus UTEX_B_3156	exon	Contig_32 753383..753568 -
exon_5256_5	exon_5256_5	Tribonema minus UTEX_B_3156	exon	Contig_32 754712..754822 -
exon_5256_4	exon_5256_4	Tribonema minus UTEX_B_3156	exon	Contig_32 755126..755398 -
exon_5256_3	exon_5256_3	Tribonema minus UTEX_B_3156	exon	Contig_32 755948..756064 -
exon_5256_2	exon_5256_2	Tribonema minus UTEX_B_3156	exon	Contig_32 757081..757368 -
exon_5256_1	exon_5256_1	Tribonema minus UTEX_B_3156	exon	Contig_32 758481..758735 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5256	CDS_5256	Tribonema minus UTEX_B_3156	CDS	Contig_32 758481..758735 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_32:749151..758735-
coding sequence from alignment at Contig_32:749151..758735-

spliced messenger RNA

>mRNA_5256 ID=mRNA_5256|Name=jgi.p|Trimin1|164657|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2013bp|location=Sequence derived from alignment at Contig_32:749151..758735- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCTCAGCTGAGCTGCCTCGTCCATCAGATGTTTGTTTGCCTGCGAA
GTTGTATTCACTGACGCGTGTCTGCATCGGCAGCGCCAGCGGCAAAGGGG
TACCTTTGTTTGCCCTCTGCCAGCAAGCAACTGATCATATCGCCTACACA
TCCTTGCTGCTGCCACAGGTGACGCCGTTCCACTCTGCGTCCCTCTACGT
TGGCGACCTCGCCCCGGACATCACGGAGTCCACGCTGTTTGAGATCTTCA
ACCAGGTCGGCCCCGTGGCATCGATCCGCGTGTGCCGCGACACCATCACG
CGCCGCTCCCTGGGCTACGCGTACGTCAACTTCCACAACGTCGCGGACGC
GGAGCGCGCGCTCGACACCATGAACTTCACCCTGATCAAGGACAACCCGT
GCCGCATCATGTGGTCCCAGCGCGACCCCTCGATGCGCCGCAGCGGCGTC
GGCAACGTCTTCGTGAAGAACCTCGACGAGACCATTGACAACAAGGCGCT
GTACGACACGTTCTCGCTCTTCGGCAACATCCTGTCGTGCAAGGTGGCCA
CTGATGATGCCGGCAACTCCAAGGGCTACGGATACGTGCACTACGAGACT
GCTGAGTCTGCCAACGAGGCCATCGCCAAGATTGACGGCATGGTCGTTGG
CGGCAAGCAGGTCCACGTGGGCCACTTTGTGCGCCGCAACGACCGCGCCG
GCCAGGCGGACTGGACCAACATCTACGTCAAGAACATCCCCCTGGCGTGG
GACGAGGAGAAGCTGCGCTCCGAATTTGCCAAGTTCGGCACCATCAACTC
CGTCAAGATCCAGCGCGAGAGCAGCGACCCCGCGTCCCTGTCGCGCGGCT
TCGGCTTCATCAACTTTGAGGACCACGAGGCCGCCGAGTCCGCCGTCTCA
GAGATGAACGGCAAGACGGTGTCGGGCCCCGCGGTGGAGACGCGCGAGCT
GTTCTGCTGCCGCGCGCAGAAGCGCACGGAGCGCCAGCGCGAGCTGCAGG
CCAAGTACGAGGCGCTCAAGGTGGAGCGCATGAACAAGTACCAGGGCGTC
AACCTCTATGTCAAGAACCTTGACGAGGCTGTGGACGAGGCAGCGCTCCG
CGAGGCCTTTGCCACGCAGGGCACCATCACCAGCGTGCGCATCATGAAGG
ACGCCGTCACGGGCAACTCCAAGGGCTTTGGCTTCGTGTGCTTCTCTTCG
CCGGAGGAGGCGACCAAGGCCGTGCAGGAGATGAACAACCGCATGGTCGC
GTCCAAGCCCATCTACGTGGCGCTGGCGCAGCGCAAGGAGGTGCGCCGCG
CGCAGCTGGAGGCGCAGTACGCCCAGCAGCGCGGCGGCCTCGGACCGCGC
GGCCCCATGGGCGCCATGCAGCCCGGCATGTACGGCATGGGCATGCCCTA
CATGATGCCTGGCCAGCCCGGCGGCATGCCGCAGCCACCCCGCGCTGGCG
GCTACCCCATGATGCCCCAGATGATGGGCCCCCGTGGCGCCCCCCGCGGT
GGCCCCAACAGCATGCAGCCCTACCCGGGTCGTGGCACCTACCCCATGCC
CGCCTACGCCATGGGCGCTATGCCCGTGCAGCAGCAGCAGCAGCAGCAGC
GCGGCGCCAGCGGCGGCGCGCCGCAGCAGGCGCAGGCCGGCGGCGTCCCG
CAGCAGGGCAACTTCAAGTACACGCAGCAGGTGCGCAACCCGCCAGCGCA
GGGCCAGGCGCCGCAGATGGGCGGCATGATGGCGGGCGGCGGCGGCGCGG
CGATGATGGCGCCGCCGCCGCAGGCCGAGAGCCTGACGGCGCAGGCGCTG
GCGGCGGCGTCGCCGGAGATGCAGAAGAACATGATCGGCGAGCGCCTGTA
CCCGCTCATCCACGAGTCGCAGCCGGAGCTCGCGGGGAAGATCACGGGCA
TGCTGCTCGAGATGGACAACGGCGAGCTGCTGCACCTGCTCGAGTCGCCC
GACTCGCTCAAGGCCAAGATCCAGGAGGCGCTGCAGGTGCTGGAGGCGCA
CACCACGGACTAA

protein sequence of jgi.p|Trimin1|164657

>Trimin1|164657|e_gw1.32.191.1 ID=Trimin1|164657|e_gw1.32.191.1|Name=jgi.p|Trimin1|164657|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=671bp
MSSAELPRPSDVCLPAKLYSLTRVCIGSASGKGVPLFALCQQATDHIAYT
SLLLPQVTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTIT
RRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGV
GNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYET
AESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAW
DEEKLRSEFAKFGTINSVKIQRESSDPASLSRGFGFINFEDHEAAESAVS
EMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGV
NLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSS
PEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPR
GPMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRG
GPNSMQPYPGRGTYPMPAYAMGAMPVQQQQQQQRGASGGAPQQAQAGGVP
QQGNFKYTQQVRNPPAQGQAPQMGGMMAGGGGAAMMAPPPQAESLTAQAL
AAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESP
DSLKAKIQEALQVLEAHTTD*

mRNA from alignment at Contig_32:749151..758735-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5256 ID=mRNA_5256|Name=jgi.p|Trimin1|164657|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9585bp|location=Sequence derived from alignment at Contig_32:749151..758735- (Tribonema minus UTEX_B_3156 )
ATGTCCTCAGCTGAGCTGCCTCGTCCATCAGATGTTTGTTTGCCTGCGAA
GTTGTATTCACTGACGCGTGTCTGCATCGGCAGCGCCAGCGGCAAAGGGG
TACCTTTGTTTGCCCTCTGCCAGCAAGCAACTGATCATATCGCCTACACA
TCCTTGCTGCTGCCACAGGTGACGCCGTTCCACTCTGCGTCCCTCTACGT
TGGCGACCTCGCCCCGGACATCACGGAGTCCACGCTGTTTGAGATCTTCA
ACCAGGTGAGCTCACATGCACAAGCTGTCAAATGTCTGAAAACTCCAAGT
TTGTGCTGTGCTGGCCTGTGCTTACACGTTTGGCTTCGGAGGCGCGGGGA
GGCAAGGGGAGGAGGAGGCCAGGAGGCGGTGAGCTGGAGCCAGCGCGCTA
TATGGAAGTGGCGCACCTCACCGGGGTCTGGTGCAGCGAGCAGCCGGCGC
TCTTGTGCCTCAGCGCTGCTGCTGCGGAGGCGGCACTGGCGATGGCTCCT
TGCCCCACACAAAGTGGATGGACTATGCTGCTGACGGCTTCGCCTGCTGC
GGTGCTGCGCGCAAACGCCAGCATCGATCGCGGGCGTCGCCCTACTTTTG
AACAGTTCAAGCGCGCCCGATGTTCCAGAGCGCGCCAATGCAGGCCATCA
CGTGCACGCCCGTCGCAGTGGAAGAGTTCGGGTCAGGGTCAGGGAGTCAG
GGGGTCAGGTCTAGATGGGTGAAACTAGCATTGCTGTGACGACCCCGGTC
TGCCGGTACCAGCCATTGCGTACGTCAGGCAACCGCTTTTAGAGTTGTGC
ATCCATTGAGGTCGGCGACGGGGTGTATCCCTTGGTGCAGTGGCTTACCG
CCTGCGCAGGCCTAACCAATCGGAGCTTGGCACAGCGCCAAATGGGTACT
CTCCATCTCTCCACTGGTGCTTTCTACAAGTCAGCAGCTGAAGTATTTGG
AGTCCATGACCCATATTGTCATTCTATCAAGCACAATGCTGATGGCTCTG
CCCTGCCCCCCTGTTTATGTTTGGTCCTCTGCCACAACTGCAAGTTGAGG
TTTCTGCCACATCTCACGATTCAGAGCAATTCATCAGGTTCTCATTGACT
CTGACAATCAGATTGACCATCTCAAGTCACTAGCTTCAGCTGCCCGCCCT
TTCATCAGCTCGCCGTGCAGGTCATGAGCATGGCCTGAAGTTGCTTCACT
GCTGTGTCACCAGGGTCAACGTGCACGGTGTGAGCCCTGGCACATCTGCA
ACACCGCCTGCGCCCGTTTCGCACTCGAATGCCCATAATCTGCCCACACA
CGACCCTGTCCCCCCTAATCCAAGTGCCCCTCCCTCCCCCCGTCCCCCCC
CCCCCACTTTCCCCCAGGTCGGCCCCGTGGCATCGATCCGCGTGTGCCGC
GACACCATCACGCGCCGCTCCCTGGGCTACGCGTACGTCAACTTCCACAA
CGTCGCGGACGCGGAGCGCGCGCTCGACACCATGAACTTCACCCTGATCA
AGGACAACCCGTGCCGCATCATGTGGTCCCAGCGCGACCCCTCGATGCGC
CGCAGCGGCGTCGGCAACGTCTTCGTGAAGAACCTCGACGAGACCATTGA
CAACAAGGCGCTGTACGACACGTTCTCGCTCTTCGGCAACATCCTGTCGT
GCAAGGTGCGCCGCGAACGGCAGTACATACCTCTGAGTACCTCATCCGCA
ACTTCAGCTCTTATTGTTGAAGTGCGCGGGGCAGCATATTGGTGGTATGA
ATCGCCCCTTGCCGTTTGACAACACTTGTGTAAGTGCACTGCACGAGGCA
TCGTCCCTTGCGCCTAGCAAGTCTGTCTTTGTGGGGTGCTGTGCTACGTC
ACACTGAACTAGTGGGCATTGCAAGCCAACTTGTTCGCGCGGACGGCACT
GTCTTCTCAACGTCAACTGGCATCAGGTCGCTATGTGCGCTTCGTCATGA
CGCTTACTCCATGTGATATGCATCAATGTACCGGCGGAGAGACTCGACCC
TGGCAGAGCTACAGTGAGGCCCTTGCATGGTAACATGCACTGAATTGAGC
ATAGCTGGCACATCTCTCGCAGTACTGCAGTCAATCCTGATGCTGACGGT
TTGCAATAGCAGAATGTATGTAGATGGGCATCAGCTGTTGCTCTGTGGTG
GTGAACACGCAACCCTTGCAGCTCACTGAAGACTGGCTTTGCGTTCATGA
TGTGCTTGATTGCACCACATCTTCATGCGCACGATTCAATCAAGTCATAC
ACTACCTAGTGCAAAGTAATCGTCATGCAGTCCGATCTTGCTACTGTGGG
CAGTCGTTGCATCTGCCCCAACCTGGCAGCTTACTGTTAAACTTTGGCGT
GCTGGCAAAGCCATCTTAGTAGAGCGCTACCGCTGTGCATTTCCATTCCC
AGGGCACTGTTAAACCTGCGTGGATCATGTGATGTTCCGTCTCGCTGCAT
CATGGCGATCTGCACGCATCAACAGATGTGCCGCGCATCTCACAGCGACA
TTGTTTGCATTTCATTTTCTTTCCACCCTTCTCTTCCTTTCTGCCCAGTC
CGTGTAATCATTGAGGTGCTTCTGCCAGTGCCTGCAGCTTTGTTGCTGCT
GCCATCACTCGACTGACTGCTATGCGCAAACACTAACCACATGCCCTCAC
TGTTCTTCCTGACGTGTGCAGGTGGCCACTGATGATGCCGGCAACTCCAA
GGGCTACGGATACGTGCACTACGAGACTGCTGAGTCTGCCAACGAGGCCA
TCGCCAAGATTGACGGCATGGTCGTTGGCGGCAAGCAGGTGAGCCGATGC
CTGAAGCGGAGGTAGGGTCTTCGCTCAAAACGTGGAGTGTTTTTGTTTGC
CAGCCACGCATACAGTAAGCCCAGACTGGTGCTGCGGCATCACGTCTTGC
CATGTGCCATACAACAAGCTGGGTGGCTGCACTCCTACAGGGTGGTGCTG
GTGCTATCAAGTTCAAGTCACATTTGAAGGTTTAATTGCTCCCACTCCAA
GAACAGGCGTGTGCCTGTTTTGCTGTTCATCACACGCAGCTGCTTGCATG
GAAGTTATTGCATGCATGATCCATGCACAAGCCACATGGCGCACTGCAAT
GACTGTACGGCTACAGTAGCTGATGGTCCTGCATGAGCCTGTAGGCACGT
ACATACATGTACATCCTGCCACACCCCTCATCACGATTCAATGACGCACG
CCTTGGGCACAGATGCATCCATGTCTCCCGCGACAGCAGTCATTGTAGTT
CAACAGCGCAGGGCTCTTGTCAGCGCAACATCGAGCACTGCACCTCGCCT
GAGCGCTGCCCCTTGATATCGCGCTTTGTGCCCGCAGGTCCACGTGGGCC
ACTTTGTGCGCCGCAACGACCGCGCCGGCCAGGCGGACTGGACCAACATC
TACGTCAAGAACATCCCCCTGGCGTGGGACGAGGAGAAGCTGCGCTCCGA
ATTTGCCAAGTTCGGCACCATCAACTCCGTCAAGATCCAGCGCGAGAGCA
GCGACCCCGCGTCCCTGTCGCGCGGCTTCGGCTTCATCAACTTTGAGGAC
CACGAGGCCGCCGAGTCCGCCGTCTCAGAGATGAACGGCAAGACGGTGTC
GGGCCCCGCGGTGAAGAAGCCTGCTGCCGCCGCCCCTGCCGCCGCCCCTG
CCGCCGCCGCCGCCGCCAAGAAGGAGGACGGCGACGCCGCCCCCGCCGCC
GCCGCTAAGGAGGAGGAGAAGGAGGCAGCGAAGGAGGGGGACAAGGAGGC
AGAGGCGGAGAAGCCCGCGGAGGGGGAGAAGGAGGCAGAGAAAGAGCTTG
AAGCCCCTGCCGCTGCCGCCGATGCTGCTGCTGCCGACAAGGAGCAGCCC
GCTGCGGAGGAGGGCGCTGCTGCCGCTACTGCCGCTGAGCCTGCTGCGGA
CGCGGAGCCGGAGGTGGAGACGCGCGAGCTGTTCTGCTGCCGCGCGCAGA
AGCGCACGGAGCGCCAGCGCGAGCTGCAGGCCAAGTACGAGGCGCTCAAG
GTGGAGCGCATGAACAAGTACCAGGTGAGACAGCGGCGGTAGCGGCGATG
TTTTCTTGTCCGGTTGTTAGTGATGCATCACAATATGCCATGTCATGATG
CTTCATGATGCAGCAAGCGAATTGCACCGGGTTCATTATGACTTGAAGTT
GAATGTGGTGGCGCTCCTTGTTTGGGTGACGCTCCACTTTACGTGTAACA
CGCTGCAGCATCCAGAGCATCTGTTGCGGATTGCTGGCCATGCGCTGCAG
TGCAACTGTTGCACTGTGCAGCTGCGTACCTTTCAGCGCGCATGTTCTAC
CAAGTAGTTCAACTATTGGCACTGATGCAACAAGGTGCTGCTCATACCCG
TATGTCAGATGTTGCCAGCCTATGTGAGGATGTTGCTGTCAGCGCCTGCC
AATGCTCGCAGTCAACGTGTGCCGCTACTCTCTTACAGCACATTCACAGC
TACCAGCACACAAGTCGGTGGGCTGTCTTTGTGGCGATGTTCTCATGTTT
TCATCAAGCTGTCTGATGCCCCTAGGTAGGCTTGTGGTGAACATGTTCAA
GCAGGATGACAGCTTACGAATCTGAAAGCTCAGCTGTACGCTGTAAAGCA
AGGAGGTCAAACATGTGCGATGATGTGCAGTTGATGACCAACACAGATGA
CATGATTGGATTATTGTCGATGGCACAATCACTTGGCTGAAGCTCGCAAG
TGCCATTATCAGATGGAATCAGTGTCTCAGATTCCCTATGCGTCGTGAAG
TTGCTGCTTGACAAATGTTGTGGTTTCCTGTGTGACGCCCCTGTTCTTGC
ACACAAATAGGCAGGCCATCACATTTCATTGATACAACGAACACATGCAT
TCACTGCGCTGCGGCCTTAGAACCTGCCTTGCTTTGCAGGGCAATTTATG
AGGTGGTTATGAGGCTGTTAACGCATGCTTACTTCAACTTGCACGCTTGT
TGAGTTTGACACTGAGCGCGATTCTTGCCCCTGTCTCATACTGTATTCCC
CGGCAAGGTTTCTTGAATGATGCCAACACCAAGCGAATCATCTTTGCATC
TTTCTTCGTCTTGGACGCCACACAACGTCAATTACTACGTAACCGCGCCA
ACTTGAACTCCGAGAATGAAGTCATCATAAAGTAAATTGACACCCGCATC
GTGCTCCTTCTTCACAGGGCGTCAACCTCTATGTCAAGAACCTTGACGAG
GCTGTGGACGAGGCAGCGCTCCGCGAGGCCTTTGCCACGCAGGGCACCAT
CACCAGCGTGCGCATCATGAAGGACGCCGTCACGGGCAACTCCAAGGGCT
TTGGCTTCGTGTGCTTCTCTTCGCCGGAGGAGGCGACCAAGGCCGTGCAG
GAGGTGAGATTTTACAGTTGCTCCTAAAAATTGTCGACCAAAAATTTGCT
TTTTCTTTCTCTTTCTACAAATTCAATGTCAATGCGTATAGGGCAGGGTC
AGGGTTAGGGGCATACAGTAGATGTCGTGTAGTGGTGAGCGTTGGGGATA
GGCAAGGGTTTGGGTCAGGGTGTAGGCATATGCGTTTTTAAGGCCAGGGT
TAGGGTTAGCGGTACAGATGAAGTTGCTGCGGTGAGATTAGAGTTGGGGT
TAGGCAGGGTCTGGTTCAGGGTTACAGTCAGGGCTCTGATAATGGTTGAG
GTGGGGTGCGGTTAGGTTAGCCTAGGTTCATTGCGCAGAGGATGTGTGAG
GCGATGATACTTGTATGCTTCATGCTAGCTGCATGGTGCAGGTTTTGGCA
AAGTAGCCAATGATGAGGACGTGTCGCAGCTTGTCCTGCAAGTTTTGCGT
TCCTCGTTGATTGAGATATAGTATACAGCTGAGGTGCAGCAACAGACTGA
CAGCGTGTAATGGCCCTGCAGCTGAATTGAGAATAGGCGACTTTTGCGAC
TTTTCGTGCCCGCTGCACACATGCCCTTCTATCATGCTTGCTTGAATATC
ATGCTGGTGCACATGATTCACAAGTACATCCTGATCGCACCTCACGATTG
TCCAAAATTTGATGAGCTGGCAGCAGAGAAACTGGCTCACAACTTCACCT
TTCAAATCCGCACTTCTCACTTGAAGTACACACATCCCGTCGACAAGCAC
ACGTTGACCGCGATACGCGATGCCGCGTGCCACTCCCCCCTACCTCCACC
TTCAAAATATGCACCTCCCCACTTGAAGCGCACACACACGTTCCCTTTGC
AGATGAACAACGCATAGTACCACGCACCTCTCACTTGCACTACACACACA
TCCCTTCTGCAGATAAACAACCGCATGGTCGCGTCCAAGCACATCTACGT
GGCGCTGGCGCCACACGCCACTTTTGCCAACTTCACCTTCCAAGTACGCC
CCTCTCACTTGAACTACACACACATAATCCCCTGTGCAGATGAACAACCG
CATGGTCGCGTCCAAGCCCATCTACGTGGCGCTGGCGCAGCGCAAGGAGG
TGCGCCGCGCGCAGCTGGAGGCGCAGTACGCCCAGCAGCGCGGCGGCCTC
GGACCGCGCGGCCCCATGGGCGCCATGCAGCCCGGCATGTACGGCATGGG
CATGCCCTACATGATGCCTGGCCAGCCCGGTAAGTGCAAGAGGGTAACAT
GTGAAATTTTATATGTGTGCTGGCTAAATAAGTGTTTGCAGAGGGTTTAT
TAGCGATGCATTAGATGAGGCGGATTCTGCGTAGCATCGGACAACGCTCG
TGTTAAATAGGCTCAACGCGCAGGGGCTGTCTCAACAGTCTCTGGGCCAG
GGTCGCCAGTGCTGTCACGCATCCATTCTGCACGGCATGCGCATGCCCTA
TATGATGCCTGGCCAGCCGGGTGAGTGCAACTGTACAGGGGAAATATGCG
TGTGCGAGTTGGACAGCAGCGCGGGTGTGTGGCGTCAGGTGGCCATGAAG
TTAGGGGGACGGTTAGGGTCAGGGCGATGTGGTTGGTTTCAAGCCTGAGC
ATGTTTTTTCGCTGCGTTCGTATGGCAGTCTCAGCATCATCTTTGTCATA
CATGAGCAAGCAGGCGTCGTCGCAGGCCACGCACCCGGATTGTTGATCCG
CGGCTGCCCCCAGTGTGCAGGTGTGCCTTAGATTGCATGTTTCAGCCAGC
CACCGACTTCACCTGGCGACGCACCCCCCTCTTCTGGATGGCACGACAAG
CCTTGCACCCTCTTATTAGCAACCCTCTCTCCGCACGCTGTTCCTACGTA
CCCACTGACTATTTCGCCGCTGCCTTGCCTGCCGCATTGTGCTCAGGCGG
CATGCCGCAGCCTTCTCATTCTTTGTGCCCTTTCTTTCACGTGGCACCAT
ACGCCAAGCACCATTACCTCGTCATCAGCAGAGTTGTATCAGAGGGCCCC
CCCCCACTTACCCCCCTCCCCCCCCCCCGCCCCCCTCCTCCTGTTGTGCT
CAGGCGGCATGCCGCAGCCACCCCGCGCTGGCGGCTACCCCATGATGCCC
CAGATGATGGGCCCCCGTGGCGCCCCCCGCGGTGGCCCCAACAGCATGCA
GCCCTACCCGGGTCGTGGCACCTACCCCATGCCCGCCTACGCCATGGGCG
CTATGCCCGTGCAGCAGCAGCAGCAGCAGGTGAGGTCGCTGTCGCCGCCG
TTGCCGCTGCTTGTTGAGGGTTGGGATTTCGATATTGGTTTGATGATGGG
TGTTAGTGCGCTGCTTCTGCAGCAGCAACGGCAGCAGCAGCACCGCCATG
CCTGTGCAGCAGCAGCAGGTGAGGCGCCGCCGCCGCCGCCGCCGCCGCTG
CTTGTTGAGTGATGGGGTGTCATTGTTGGACGATGGGTATCATTGCGCTA
CTGCTGCAGCAGCAACGGCAGCAGCAGGCGCTGCGGCTGGCGGTGCCATT
TGTGAGAATGACTGGTGTCCTCGTGTGTTGAGCGATGAGCGTTGTTGCTG
TTTCGAAGGGCGCTGGAGCTGCATACAGAAGTTGAAGTTGGGCTCGTGGT
CGTGATGCGCTGACGCTGCATGCGTTTGATGGTTGTGGCCCTGCGGCACT
GCTTTGGAGTCACGGTAGACACATGTTCATGGTGTTTGCGATCTGCGCTC
TCTCTCTCTTGTATGCCGTGTTGTCTTCAGTGGCGCATGCATTTCCCTCC
TGCCATTTGCTAGCACAGCACACAAGGCGATGGACTGGTGCTGCGTTCTC
GTTCCAAAGACAAAAGCCTTTGGTAGAGCGTTCACGTGTCCCCAACGTGC
AGCCCCTTAGTGTGGAGCCTGACAGTAGAGAGAGCACAGCATGTGCGAAT
CGAAAGCCGGTGGCCTTGCTGCCGTTTTTCCTTGATGTACGCACAATCTC
TGTACGCACCGATCTTCCTCACCACTCGCTCACTCGCTGCGACGATATGC
TGTTAACAGCACTACAATAATACCCAACTGACTGATGTTATCACCCGCAT
ATCATGATACCATGTAGGTGCCCAGGCGGGGTGCCAGCGGCGGCCGCGGC
GGCGCCGGCGGACGCGGCATGCCTGCCGGCGTTGCCATGCAGGCCGGCGT
TGTCCCCGGCGCTGGAATGAACGGCGCTGGCCGCGGCGGTGGCGCTCAGC
CCATGGGCGTCCCCATGGGCCAGATGCCCGCCGGCGTGCAGCAGCAGCAG
CGCGGCGTGATGCCCATGCAGGTATGTGTGTATGTTGCGCCGTCTTGATT
GTATTATGTCACATTATAATATGCGCGCTTTGAAATATGCCCATGCCAGC
TTGGATGCTGTAGCTTCACGTTCAATGCAGGCAGCAGCAACAGCAGCAGC
AGCAGCGCGGTGTGATGAGCATGCAGGTATGTCTATACCATGCACACTGC
GCGGTGCGCGATGAGAGAGCTGGTGTCAAGCGCGGGTGCTGTAGCGCTGT
GTCTTATGCATGCAGCAGCAGCAGCAGCACTCACCAGCTGTGCAGCGTGA
TGCGTGCAGCACCATCAACAGGCAGAGCGCACTGTGGAAAAGGTTCTTGA
TCCATAGGCCATATGACGTGCAGATGCCCGAGGGGACCGTCGTTTATATC
CAGATGCTGGAATTCATGCGTCGAGTGGTGCACCTCGCTTGACAACTTTT
CAACGCTGCACAAGCGTGCACCACAGGACATCAGCTGCGCCCACTCCCCC
TTCTGACTTGACCCCCCCCCCCCCCCCCCCCCCCTGACGCGTACGCGCGC
GCGCAGGGCATGCAGCAGCAGCGCGGCGCCAGCGGCGGCGCGCCGCAGCA
GGCGCAGGCCGGCGGCGTCCCGCAGCAGGGCAACTTCAAGTACACGCAGC
AGGTGCGCAACCCGCCAGCGCAGGGCCAGGCGCCGCAGATGGGCGGCATG
ATGGCGGGCGGCGGCGGCGCGGCGATGATGGCGCCGCCGCCGCAGGCCGA
GAGCCTGACGGCGCAGGCGCTGGCGGCGGCGTCGCCGGAGATGCAGAAGA
ACATGATCGGCGAGCGCCTGTACCCGCTCATCCACGAGTCGCAGCCGGAG
CTCGCGGGGAAGATCACGGGCATGCTGCTCGAGATGGACAACGGCGAGCT
GCTGCACCTGCTCGAGTCGCCCGACTCGCTCAAGGCCAAGATCCAGGAGG
CGCTGCAGGTGCTGGAGGCGCACACCACGGACTAA

Coding sequence (CDS) from alignment at Contig_32:749151..758735-

>mRNA_5256 ID=mRNA_5256|Name=jgi.p|Trimin1|164657|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2013bp|location=Sequence derived from alignment at Contig_32:749151..758735- (Tribonema minus UTEX_B_3156 )
ATGTCCTCAGCTGAGCTGCCTCGTCCATCAGATGTTTGTTTGCCTGCGAA
GTTGTATTCACTGACGCGTGTCTGCATCGGCAGCGCCAGCGGCAAAGGGG
TACCTTTGTTTGCCCTCTGCCAGCAAGCAACTGATCATATCGCCTACACA
TCCTTGCTGCTGCCACAGGTGACGCCGTTCCACTCTGCGTCCCTCTACGT
TGGCGACCTCGCCCCGGACATCACGGAGTCCACGCTGTTTGAGATCTTCA
ACCAGGTCGGCCCCGTGGCATCGATCCGCGTGTGCCGCGACACCATCACG
CGCCGCTCCCTGGGCTACGCGTACGTCAACTTCCACAACGTCGCGGACGC
GGAGCGCGCGCTCGACACCATGAACTTCACCCTGATCAAGGACAACCCGT
GCCGCATCATGTGGTCCCAGCGCGACCCCTCGATGCGCCGCAGCGGCGTC
GGCAACGTCTTCGTGAAGAACCTCGACGAGACCATTGACAACAAGGCGCT
GTACGACACGTTCTCGCTCTTCGGCAACATCCTGTCGTGCAAGGTGGCCA
CTGATGATGCCGGCAACTCCAAGGGCTACGGATACGTGCACTACGAGACT
GCTGAGTCTGCCAACGAGGCCATCGCCAAGATTGACGGCATGGTCGTTGG
CGGCAAGCAGGTCCACGTGGGCCACTTTGTGCGCCGCAACGACCGCGCCG
GCCAGGCGGACTGGACCAACATCTACGTCAAGAACATCCCCCTGGCGTGG
GACGAGGAGAAGCTGCGCTCCGAATTTGCCAAGTTCGGCACCATCAACTC
CGTCAAGATCCAGCGCGAGAGCAGCGACCCCGCGTCCCTGTCGCGCGGCT
TCGGCTTCATCAACTTTGAGGACCACGAGGCCGCCGAGTCCGCCGTCTCA
GAGATGAACGGCAAGACGGTGTCGGGCCCCGCGGTGGAGACGCGCGAGCT
GTTCTGCTGCCGCGCGCAGAAGCGCACGGAGCGCCAGCGCGAGCTGCAGG
CCAAGTACGAGGCGCTCAAGGTGGAGCGCATGAACAAGTACCAGGGCGTC
AACCTCTATGTCAAGAACCTTGACGAGGCTGTGGACGAGGCAGCGCTCCG
CGAGGCCTTTGCCACGCAGGGCACCATCACCAGCGTGCGCATCATGAAGG
ACGCCGTCACGGGCAACTCCAAGGGCTTTGGCTTCGTGTGCTTCTCTTCG
CCGGAGGAGGCGACCAAGGCCGTGCAGGAGATGAACAACCGCATGGTCGC
GTCCAAGCCCATCTACGTGGCGCTGGCGCAGCGCAAGGAGGTGCGCCGCG
CGCAGCTGGAGGCGCAGTACGCCCAGCAGCGCGGCGGCCTCGGACCGCGC
GGCCCCATGGGCGCCATGCAGCCCGGCATGTACGGCATGGGCATGCCCTA
CATGATGCCTGGCCAGCCCGGCGGCATGCCGCAGCCACCCCGCGCTGGCG
GCTACCCCATGATGCCCCAGATGATGGGCCCCCGTGGCGCCCCCCGCGGT
GGCCCCAACAGCATGCAGCCCTACCCGGGTCGTGGCACCTACCCCATGCC
CGCCTACGCCATGGGCGCTATGCCCGTGCAGCAGCAGCAGCAGCAGCAGC
GCGGCGCCAGCGGCGGCGCGCCGCAGCAGGCGCAGGCCGGCGGCGTCCCG
CAGCAGGGCAACTTCAAGTACACGCAGCAGGTGCGCAACCCGCCAGCGCA
GGGCCAGGCGCCGCAGATGGGCGGCATGATGGCGGGCGGCGGCGGCGCGG
CGATGATGGCGCCGCCGCCGCAGGCCGAGAGCCTGACGGCGCAGGCGCTG
GCGGCGGCGTCGCCGGAGATGCAGAAGAACATGATCGGCGAGCGCCTGTA
CCCGCTCATCCACGAGTCGCAGCCGGAGCTCGCGGGGAAGATCACGGGCA
TGCTGCTCGAGATGGACAACGGCGAGCTGCTGCACCTGCTCGAGTCGCCC
GACTCGCTCAAGGCCAAGATCCAGGAGGCGCTGCAGGTGCTGGAGGCGCA
CACCACGGACTAA