mRNA_5233 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348871
Unique Name	mRNA_5233
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 303 bits (777), Expect = 2.200e-101
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 2

Query:  182 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTFV 676
            MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTFV
Sbjct:    1 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTFV 165

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 8.150e-47
Identity = 92/168 (54.76%), Postives = 125/168 (74.40%), Query Frame = 2

Query:  182 MVILTRLINMGLCVLLSATAVLELIGLP-NFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTA-STFV 676
            ++I  R+ N+ LC +L+ATAVL+LIG   +    VLA YL AF+CILCCFETH+  +A   A+NFGFLYNAKGRA+FL+FVG+LCFS  S + +++G  M+ +++FNF+VI KYPE +   QRKDLES  RD++R N+GA+A+ GV FA+NNP  A   A+ A ST+V
Sbjct:   54 LMIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 221

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.330e-25
Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 2

Query:  170 QASHMVILTRLINMGLCVLLSATAVLELIGLPNFQT---LVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE-VQNQQRKDLESSSRDFVRNNQGAIARQG 610
            Q   +VI  R+ N  LC+L+SA AVL +I +P   T    VLA Y+ AF+C+LCCFE ++  +A   A+NFGFLY+AK RA FL+FVG+LCFS G I G ++G AMIA+++FN  V+ KYP+   N      E  +  F++ N G +AR+G
Sbjct:   78 QTPPLVIYMRVANFALCILMSAAAVLTVI-VPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG-LARKG 225

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH)

HSP 1 Score: 105 bits (263), Expect = 6.540e-24
Identity = 50/117 (42.74%), Postives = 84/117 (71.79%), Query Frame = 2

Query:  236 TAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNN 586
            T++L ++   +  T VLA Y+  F+C+LCCFETH+  ++ + A NFGF+Y+AK R+LF++F+G + FSF S+ G I G+ M+A++ FN F + +YP+ ++ QRKD +S  +D++ +N
Sbjct:    4 TSLLAVLTTQSATTGVLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSF-SLFGKIIGLCMLANAGFNLFAVFRYPQYEDMQRKDAQSEIQDYLASN 119

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S4EDS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDS9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 7.830e-24
Identity = 57/141 (40.43%), Postives = 91/141 (64.54%), Query Frame = 2

Query:  116 QRSRPPLPQLRHRLQLLLQASHMVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ 538
            QR    LPQ R         S ++I  RL+NMG+ +L++A A+++L+ LP F   VL +Y++ FA ++CCFETH++ ++ +   NFGFLYN KGR  F + V  LCFS G ++G ISG+ ++  + +N +VI K+P+ + +
Sbjct:   73 QRLEQKLPQTR---------SGLIISMRLLNMGVSILMAAAAIIKLLSLPAFTKGVLCLYIWFFALLICCFETHLAQVSRIIGENFGFLYNVKGRVTFFILVSFLCFSIG-LIGLISGVGLLVAAAYNAYVIYKHPDYERE 203

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.790e-18
Identity = 53/165 (32.12%), Postives = 92/165 (55.76%), Query Frame = 2

Query:  182 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTF 673
            +++  RL N+ L  L+  +AV   +   +    ++  Y+  F C+ CC+ETH+  ++   A NFGFLYNAK R LF++ +  LC++  +I+G I+    +A    N +V+ K+P  Q+Q +  DL     + +   Q   ++  V++A+ NP Q  AAAR+A  +
Sbjct:   90 LILYMRLANVALSALMITSAVTSALMSASLSNFIIGAYVSCFGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMMLIATLCYTL-NIIGMITAFLCVAAVCLNVYVLFKHPHYQDQIKNDDLHGKGPETI---QDMASQYAVSYARENPDQVQAAARSAGKW 250

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.150e-18
Identity = 58/166 (34.94%), Postives = 93/166 (56.02%), Query Frame = 2

Query:  197 RLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE----VQNQQRKD---------LESSSRDFVRNNQ---GAIARQGVAFAQNNPQQAA 646
            RL N+ + VL+   A+   I   +  T V+A+Y+  F C++CCFETH+  ++ + A NFGF+YNAKGR +F++ +  LC +  ++ G I+G  M   +++N +VI  +PE     Q   RK           +S +  +V+NN     A+A  G  +A NNP+ AA
Sbjct:   96 RLANVAVAVLMVTAALTTFITSSSLSTAVIALYISCFGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMILMATLCMTL-NVFGQITGGLMYGVALYNLYVICMHPEYGSETQELDRKGENPNSIQHVAQSYATGYVQNNPDQVAAVASAGAQWAYNNPEVAA 260

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7R9U1Y8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1Y8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.880e-16
Identity = 52/153 (33.99%), Postives = 90/153 (58.82%), Query Frame = 2

Query:  188 ILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAA 646
            ++ R++N+G   +LS T+++  IG  N  + ++A+Y++ FA +LCCFE H++ +A+   S FGF+Y    R +F+L +  L F+ G ILG++SG  ++  ++   F+   YPE +  Q K  E+   D   N         +A+A+ NP+QAA
Sbjct:   94 LMLRILNIGTATMLSITSLIVFIGSVNASSAIIALYVWLFAMLLCCFEVHLAAVANFLLSKFGFIYKPVPRVMFMLLIAGLSFNLG-ILGWVSGGLLVFSAVATTFLYCTYPEFREMQYKVAEA---DLQSN--------AMAWARANPEQAA 234

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 5.440e-15
Identity = 65/164 (39.63%), Postives = 88/164 (53.66%), Query Frame = 2

Query:  170 QASHMVILTRLINMGLCVLLSATAVLELIGLPNFQT---LVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE-VQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAA 649
            Q   +VI  R+ N  LC+L+SA AVL +I +P   T    VLA Y+                +A   A+NFGFLY+AK RA FL+FVG+LCFS G I G ++G AMIA+++FN  V+ KYP+   N      E  +  F++ N G   + G A       Q AA
Sbjct:   78 QTPPLVIYMRVANFALCILMSAAAVLTVI-VPAGATPASWVLAFYVL---------------VAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPGLARKVGGAMINAAGSQPAA 224

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BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S3JYJ7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYJ7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.060e-12
Identity = 45/123 (36.59%), Postives = 73/123 (59.35%), Query Frame = 2

Query:  185 VILTRLINMGLCVLLSATAVLELI-GLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSI--LGYISGIAMIADSIFNFFVILKYPEVQNQQR 544
            ++L R+ N+    LL+  A L+L     +  + V++ YLFAFA ++  FE H+SF+  + A N GF+Y A GRA F++ +G+LCFS   +   GY  GI +I  ++ N F++ K+P  +   R
Sbjct:   93 IVLMRIANLCSAFLLACLAALKLQKNTGDVSSGVISFYLFAFAILIFTFECHVSFLGKVIADNLGFMYQAPGRASFMILLGMLCFSDEPLPGFGYFVGIFVIVTALLNAFIMFKFPNYERSCR 215

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348871 vs. uniprot

BLAST of jgi.p|Trimin1|348871 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14


Match Name	E-value	Identity	Description
A0A836CFZ2_9STRA	2.200e-101	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LTB9_ECTSI	8.150e-47	54.76	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
W7TT71_9STRA	3.330e-25	47.02	Golgi apparatus membrane protein TVP15 n=1 Tax=Nan...	[more]
A0A482T2R9_9ARCH	6.540e-24	42.74	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A7S4EDS9_9STRA	7.830e-24	40.43	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S2MMX0_9STRA	1.790e-18	32.12	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2WC07_9STRA	7.150e-18	34.94	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7R9U1Y8_9STRA	3.880e-16	33.99	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A4D9D7K6_9STRA	5.440e-15	39.63	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S3JYJ7_9STRA	3.060e-12	36.59	Hypothetical protein n=2 Tax=Aureoumbra lagunensis...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_32	contig	Contig_32:609726..614129 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348871\|estExt_Genemark1.C_Ctg_320079
Description	COPI associated protein
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	28NJZ@1\|root,2SB3I@2759\|Eukaryota
Evalue	1.16e-49
Seed ortholog	2880.D8LTB9
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	Golgi apparatus membrane protein TVP15
Ec32 ortholog	Ec-12_005990.1
TranscriptId	349193
Track	FilteredModels1
ProteinId	348871

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348871	gene_5233	Tribonema minus UTEX_B_3156	gene	Contig_32 609726..614129 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348871	Trimin1\|348871\|estExt_Genemark1.C_Ctg_320079	Tribonema minus UTEX_B_3156	polypeptide	Contig_32 610801..613843 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5233_1	exon_5233_1	Tribonema minus UTEX_B_3156	exon	Contig_32 609726..609764 +
exon_5233_2	exon_5233_2	Tribonema minus UTEX_B_3156	exon	Contig_32 609914..610046 +
exon_5233_3	exon_5233_3	Tribonema minus UTEX_B_3156	exon	Contig_32 610792..610884 +
exon_5233_4	exon_5233_4	Tribonema minus UTEX_B_3156	exon	Contig_32 611598..611770 +
exon_5233_5	exon_5233_5	Tribonema minus UTEX_B_3156	exon	Contig_32 612903..613011 +
exon_5233_6	exon_5233_6	Tribonema minus UTEX_B_3156	exon	Contig_32 613712..614129 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_5233	UTR5_5233	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_32 609726..609764 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5233	CDS_5233	Tribonema minus UTEX_B_3156	CDS	Contig_32 610801..610884 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5233	UTR3_5233	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_32 613844..614129 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_32:609726..614129+
coding sequence from alignment at Contig_32:609726..614129+

spliced messenger RNA

>mRNA_5233 ID=mRNA_5233|Name=jgi.p|Trimin1|348871|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=965bp|location=Sequence derived from alignment at Contig_32:609726..614129+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTGGGCGGCCTCTGCCGACGACAATCCCTTTGCGGACCCGTCAGT
GGCTGCTGCGCGGAGTGCGCCAGCAGCGAACAGCAGTAACACGCCATCCT
GGTTATCTGGGGGAGCAGCGGTCCCGCCCCCCCCTCCCCCAGCTGCGGCA
CCGCCTCCAGCTACTGCTGCAGGCGTCGCACATGGTGATCCTCACGCGGC
TGATCAACATGGGCTTGTGCGTACTGCTGAGCGCGACAGCGGTGCTGGAG
CTCATCGGACTGCCTAACTTCCAAACGCTGGTGCTGGCAGTGTACCTGTT
TGCGTTCGCCTGCATCCTGTGCTGCTTCGAGACGCACATCAGCTTCATTG
CGAGCCTGGCGGCGTCCAACTTTGGGTTCCTGTACAACGCCAAGGGCCGC
GCTCTCTTCCTCCTCTTTGTGGGGATTCTCTGCTTCAGCTTCGGGTCCAT
ACTGGGCTACATATCGGGCATCGCAATGATCGCGGACTCCATCTTCAACT
TCTTTGTCATCCTTAAGTACCCGGAAGTACAGAACCAACAACGCAAGGAT
CTGGAGAGCTCCAGTCGCGACTTTGTGAGGAACAACCAGGGCGCCATCGC
GCGGCAAGGGGTCGCCTTCGCGCAGAACAACCCGCAGCAGGCGGCGGCGG
CGGCGCGCACCGCGTCCACCTTTGTCTAGCTCGCCCATGCGCGCGCGCGC
CCCCATTTGTCTGTGCGTGTTCGTTCAGCGCCAACCTCAGTCGCCACAGC
CTCCCGACTCTTTTATGCTTTGCGCGCCGCCTCGAAGGATGTGATGACTG
TGTGAGGTGTCGATGGGTGGGGGGTACGCATCAAGTATGGGCCATGCTAC
CTACCCCAGTCCCCCCTTGAGAACGTGCGGCTGTGTGGGGGGGGGCACGC
GCGCGGGCCTGCGCCCCTTGTTGTTGGTATGTTCAAGTTTATGTACATGG
ACCAGTATTTGTGCA

protein sequence of jgi.p|Trimin1|348871

>Trimin1|348871|estExt_Genemark1.C_Ctg_320079 ID=Trimin1|348871|estExt_Genemark1.C_Ctg_320079|Name=jgi.p|Trimin1|348871|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=166bp
MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFE
THISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMI
ADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNN
PQQAAAAARTASTFV*

mRNA from alignment at Contig_32:609726..614129+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5233 ID=mRNA_5233|Name=jgi.p|Trimin1|348871|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4404bp|location=Sequence derived from alignment at Contig_32:609726..614129+ (Tribonema minus UTEX_B_3156 )
ATGGCGTGGGCGGCCTCTGCCGACGACAATCCCTTTGCGGTGAGCGACAT
GTTTTTCATGTTGGTTCGACGGCACTCTAATCTGCGACTTGCTCTGCTAG
AGCAGCTCAACTTGCGTTCTTGTCTGCCGAGGTTTTAAACGGCGAGCTGT
AAAAACCTTCGGCCTGTCTCGTACGCTGCTGCATGCAGGACCCGTCAGTG
GCTGCTGCGCGGAGTGCGCCAGCAGCGAACAGCAGTAACACGCCATCCTG
GTTATCTGGGGGAGCAGCGGTCCCGCCCCCCCCTCCCCCAGCTGCGGCAC
CGCCTCCAGCTACTGCTGCAGGTATGCTGTGTTGCTGCAATTTGTGTGCT
TTTGGTAGCTGATACCCACGAAGCGTGCCAGGCATTTCATCTTGATACCG
CCATGCGGGCAGCGGTCACGAAACGTGATTGTGAATATGGCACATAAGTC
CAAAACGTGAGTTAGATTCCAGATCCCACCCTGCATTGCGCAGTGCACGC
AGTACACACCCGCGAGTTCTACATCTGTGTATCACAGTACTCGACTGAAG
CCACATCAACCGCGGTGCAGCCGTGCCGTCGCGCAACATGAAACTGAAGG
CCGCTGGCCGTCAAACGCAGCTGTCGGCACTGTTCTGAGCGAGTTGTCGC
ATCAGCCAGTGATGCACCCGGATAAGCTATAGTGTTGTGTTGTCATCCCA
TTTCCGAGCGCTGATGCATGCTGAAGTGTTGAGCAGCAATGCAAGTCATT
CGCGAGTTGTCGCACCGCCCAACGCTGCATGCTCAGCAGTTGAACATGTT
GTCGTTTCGTTGCCCAGCGCTGATGCATTCAGCAGCAATGTAACTTATGA
ACAAGTCGACGTTCACAAGTCATCGCATCATCGAGTGCTGCAGTTATCAG
CAATACCTCTAATATGTTGTCATCTAATCACCCAGCGTTGACACACTCTC
AAGTGCTGAGCACCTACTCATCTGAATCACAATGTAACTGCCACTGTCTC
TTTTGCCCCCTACCTACCTACCTACCAGCGAGCGCGCGCGCACCGGACCC
TGCGCGGGACTCCAAGGCGTCGCACATGGTGATCCTCACGCGGCTGATCA
ACATGGGCTTGTGCGTACTGCTGAGCGCGACAGCGGTGCTGGAGCTCATC
GGACTGCCTGTACGTGCCGTAACTGCCGGTTGTGAGCGCGCGCGCATGCC
TCAACGCTGCGACTTTTGCGGCAAGACAGGATACCGTGAAGACTTTGTGT
GCGGCTCATCGCCGTTTGTGTGTGCGCCTGCATGCCTCAACTGCTGTGTA
CGTCGTGGCAAGACTAGATACAACTTCAACACCGCTTCCAGCGTGTTTCA
TTACATTCAGCCCAAGTTGGTGCCACCTTTCGCGGTGCATGAGGGCCAAA
AGCGCAGCTGCTGCTTGTGGCGTACGTTCTACGTGCATCGCACTACTGCC
TTGTGTCTGAAAATCGGACAGTCCACCATCTGGCACAGCAGGATTATAGC
CTATTCATAGGTGCCGATGTAAGCGTTGCTCTCTGAGCAACAGCCACTGT
CAGTATCATGCCAACACTTCTGCAGTGCTGCTGGTGGCACCAACCAGCTC
CTTGTGCGCATGTAGGGCTAGGGTTCAGGTCAAACTCACAGTACTCCACG
GCGCGCGACTGGCACTGCTGCGCTCCTGTGCACAGTGGACTGCGCAGCAA
CAAAAAAAAAGACCGTCGATGTGTGGTGCAAGTGCATGTTTTCACTGTTG
ACAGCTGCACTCCCGTGTACAGTGGACTGCACAGCACAAAATGAAAAAGA
CTGTCAATGTGGGGTGCAAGTGCACGTTCTAACTGTCGTGCTGCTGTGAC
CTTTCGTCGCCCCGCCGCGCAGAACTTCCAAACGCTGGTGCTGGCAGTGT
ACCTGTTTGCGTTCGCCTGCATCCTGTGCTGCTTCGAGACGCACATCAGC
TTCATTGCGAGCCTGGCGGCGTCCAACTTTGGGTTCCTGTACAACGCCAA
GGGCCGCGCTCTCTTCCTCCTCTTTGTGGGGATTCTCTGCTTCAGGTACT
CTGCAATAAATCGGGTGTTTGCTACTTTGAAGTAGTTTGACTCAGCTTTT
GTCACTTCACCGTTTTTACGCACGACAACAGACCTGATGTACGAGTGCTA
GCTCTACAATAGACGGCTTGTTGTAGTGAGAGTGGGTCGCGGGTGCATCG
GACTTTGATTTCCACGGCGATGCGGCCGCAGCACGCGACACAAAGTACGC
ACCGATACCATATAGTCATAGCTTGTTCACGCGGACATCAACGCCATCAG
TTATGTAGTGCTTTTTATATGATTAAGGTCAGGATGAGGGTTAAGAAAGG
CGTTGGGGTTGGTTGGCCATGCGGCCGCAGCACGCGACACAAAGTACGTA
CCGGTACCATGCAGTCATAGCTCGTTTCATGCGGAAGTCAATGCCATCAG
TACGTCAAACTTGGTGACGGAGCATCCCATACACGCAGGGAGCGCAACGT
TGCAGTTGCCCACGCAGAGAGCGCAACGTTGCGGTTGCCCACGCAGAGAG
CTCCTCCTGCTCAGAGCCTGTGTTATTCACAACATGTGTGATCGCAGGCA
TAGCGCTCCACTGCAAATTCAAGGTCATACCTAACGATGCAGTTCTACTT
GCTTGTCTCTGTGTACTGCTCTAGCTGGCGGCGCGCACGTCATGTGTGAC
GTCGCCAACTCTGTAGTCACTGACAGAGCAGAGCTCAGCACATGTTGAGG
TTGGGTCCTCCGGTGCGCAGTGACGTGCCACCGTGACGATCCGCTGGTAG
CAACACAGCTCTAGTGATCACAATGTTAACGTGTATGCCACCTCTCTGAG
GTAGTCTGTCGATACAGTGCGTGTTGAAAGTGCAGCCAGGCTTATTGTCA
AACTGGACACGCTCTGTCGCCTACCCCTTGTACACACCACTGTTCACACA
TCGCTTGCTCGATGGTGCTCCGCGCCCGATCAACGGTTTCGTGCTCGCCA
TGCATGTACATGTGATGCAGCCAACGCAGATGCCTCGATACTTTTTCTGA
CGTTGCCGGCTGGTCGCAAGCAGTCTAGCAGCTGACCCTTCGCTGCAGAG
ACACAGGTTTTGGCAACCAACTTCAAGATGAAGTATATGGCTGATGCTGT
AACGTTTGATGTGTGCTGCACTGACAGCTTCGGGTCCATACTGGGCTACA
TATCGGGCATCGCAATGATCGCGGACTCCATCTTCAACTTCTTTGTCATC
CTTAAGTACCCGGAAGTACAGAACCAACAACGCAAGGTGAGCTTGCGCGC
GCTGCACGAGTACACGGCAAGCACAGAGACTCGGAATGGTGTACGCATGG
ATGCTCACAAAGGCCACGCAGCACGCGTTGTGCCCAAGAATAATTGTGGT
GTCTGCTTTCGGTGCGTGCTAGAGTGCTGCTTGCCCGCAGTGTACAGTGC
AGGTGTTCAAGACACCGTGCACGTGTATTCAAAATATACATAATCGATGG
AGCATGGCAGGTTTGGCAGGCAGCGTGATATGTGCACTAACGCTTCGTTC
AGACGCGCAACCCATGCTTCACGCTGGTGCTTGGAAAGTACCGCAGAATT
TGTACACAATGGATTTCAAGTAATCGTCACACCGTTGATGACAGCATACG
GCAACGGTCAGCAAGGGCACTGTAGGGTCAGACCATGGTGTCTTGAAAAT
TCTCAACAGTTTGCGCTTGTGTCTGTCCTTCGATTGTACTTGCACGAACT
TCTGCTTTGAACTCTTGTGCAAGCATGTCATCTCGGCACGCATCTTGCCC
CCTTTGCATGAGAAAAGTCCAGTGTGCGCGCTGGCTAAAGCTTGATCTGC
TTCCATGACCCTAAGGTGCGCCTCCACTTCGCCACTCAGCAGCCACACAC
GCGCTTGCGTGCGCCTGCACGAATCAGCCTGACTCAACTGCATGCGCTCA
TGCCTCCAACCTGCCACTGCGCGTCGCTGCCTGTAGGATCTGGAGAGCTC
CAGTCGCGACTTTGTGAGGAACAACCAGGGCGCCATCGCGCGGCAAGGGG
TCGCCTTCGCGCAGAACAACCCGCAGCAGGCGGCGGCGGCGGCGCGCACC
GCGTCCACCTTTGTCTAGCTCGCCCATGCGCGCGCGCGCCCCCATTTGTC
TGTGCGTGTTCGTTCAGCGCCAACCTCAGTCGCCACAGCCTCCCGACTCT
TTTATGCTTTGCGCGCCGCCTCGAAGGATGTGATGACTGTGTGAGGTGTC
GATGGGTGGGGGGTACGCATCAAGTATGGGCCATGCTACCTACCCCAGTC
CCCCCTTGAGAACGTGCGGCTGTGTGGGGGGGGGCACGCGCGCGGGCCTG
CGCCCCTTGTTGTTGGTATGTTCAAGTTTATGTACATGGACCAGTATTTG
TGCA

Coding sequence (CDS) from alignment at Contig_32:609726..614129+

>mRNA_5233 ID=mRNA_5233|Name=jgi.p|Trimin1|348871|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=498bp|location=Sequence derived from alignment at Contig_32:609726..614129+ (Tribonema minus UTEX_B_3156 )
ATGGTGATCCTCACGCGGCTGATCAACATGGGCTTGTGCGTACTGCTGAG
CGCGACAGCGGTGCTGGAGCTCATCGGACTGCCTAACTTCCAAACGCTGG
TGCTGGCAGTGTACCTGTTTGCGTTCGCCTGCATCCTGTGCTGCTTCGAG
ACGCACATCAGCTTCATTGCGAGCCTGGCGGCGTCCAACTTTGGGTTCCT
GTACAACGCCAAGGGCCGCGCTCTCTTCCTCCTCTTTGTGGGGATTCTCT
GCTTCAGCTTCGGGTCCATACTGGGCTACATATCGGGCATCGCAATGATC
GCGGACTCCATCTTCAACTTCTTTGTCATCCTTAAGTACCCGGAAGTACA
GAACCAACAACGCAAGGATCTGGAGAGCTCCAGTCGCGACTTTGTGAGGA
ACAACCAGGGCGCCATCGCGCGGCAAGGGGTCGCCTTCGCGCAGAACAAC
CCGCAGCAGGCGGCGGCGGCGGCGCGCACCGCGTCCACCTTTGTCTAG