mRNA_5161 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348824
Unique Name	mRNA_5161
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348824 vs. uniprot
Match: A0A835YVV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV2_9STRA)

HSP 1 Score: 955 bits (2468), Expect = 0.000e+0
Identity = 565/565 (100.00%), Postives = 565/565 (100.00%), Query Frame = 1

Query:    1 MVQESVGWVAWGYAAHHCSPLSGYTTAKELSELRSSFVSYEQXXXXXXXXXXXRLGSVRSRRLVQRDAGCSGKAQACAVDAGCNACLKAYTPAQVGEIENVAVGCAAVAFEEVMEGFPAACTAGSGGAAALLLEWIECQAVAACMSATCAGQRAACGADAACAACYAAQVQVDYPQDCAGAFGAFQQLTRAPPSMSAHTRTRQAYPPDLGCDFLSAASPLRAVAVCEWEYLHPDEPCYAEGSSAPTQAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANLELDNVGGDAEGLDACNSVTVLASKVSSERSERAPSRDVFSENDEGCQQCLTKGGFDAATLEALGDPIDGCFFPTFAEALQSEVEALYRSRQLFPPKCIDVTSQSTPMLTAYLDCAARAACQAALCGGALAACARDADCARCSALVDLTALRTRPATCGDWMTALKQELPQECAKGVKQQLPLYRLFGCYWNIDHPAQPCPGLATAAPSLAPSEAPTFAPVAVAGAXXXXXXXXXXXXXXXXRRQRSGVRLRAAEGEGSDAHERQPRSGGC 1695
            MVQESVGWVAWGYAAHHCSPLSGYTTAKELSELRSSFVSYEQXXXXXXXXXXXRLGSVRSRRLVQRDAGCSGKAQACAVDAGCNACLKAYTPAQVGEIENVAVGCAAVAFEEVMEGFPAACTAGSGGAAALLLEWIECQAVAACMSATCAGQRAACGADAACAACYAAQVQVDYPQDCAGAFGAFQQLTRAPPSMSAHTRTRQAYPPDLGCDFLSAASPLRAVAVCEWEYLHPDEPCYAEGSSAPTQAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANLELDNVGGDAEGLDACNSVTVLASKVSSERSERAPSRDVFSENDEGCQQCLTKGGFDAATLEALGDPIDGCFFPTFAEALQSEVEALYRSRQLFPPKCIDVTSQSTPMLTAYLDCAARAACQAALCGGALAACARDADCARCSALVDLTALRTRPATCGDWMTALKQELPQECAKGVKQQLPLYRLFGCYWNIDHPAQPCPGLATAAPSLAPSEAPTFAPVAVAGAXXXXXXXXXXXXXXXXRRQRSGVRLRAAEGEGSDAHERQPRSGGC
Sbjct:    1 MVQESVGWVAWGYAAHHCSPLSGYTTAKELSELRSSFVSYEQXXXXXXXXXXXRLGSVRSRRLVQRDAGCSGKAQACAVDAGCNACLKAYTPAQVGEIENVAVGCAAVAFEEVMEGFPAACTAGSGGAAALLLEWIECQAVAACMSATCAGQRAACGADAACAACYAAQVQVDYPQDCAGAFGAFQQLTRAPPSMSAHTRTRQAYPPDLGCDFLSAASPLRAVAVCEWEYLHPDEPCYAEGSSAPTQAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANLELDNVGGDAEGLDACNSVTVLASKVSSERSERAPSRDVFSENDEGCQQCLTKGGFDAATLEALGDPIDGCFFPTFAEALQSEVEALYRSRQLFPPKCIDVTSQSTPMLTAYLDCAARAACQAALCGGALAACARDADCARCSALVDLTALRTRPATCGDWMTALKQELPQECAKGVKQQLPLYRLFGCYWNIDHPAQPCPGLATAAPSLAPSEAPTFAPVAVAGAXXXXXXXXXXXXXXXXRRQRSGVRLRAAEGEGSDAHERQPRSGGC 565

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348824 vs. uniprot

BLAST of jgi.p|Trimin1|348824 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YVV2_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_32	contig	Contig_32:51494..60270 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348824\|estExt_Genemark1.C_Ctg_320010
Hectar predicted targeting category	other localisation
TranscriptId	349146
Track	FilteredModels1
ProteinId	348824

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348824	gene_5161	Tribonema minus UTEX_B_3156	gene	Contig_32 51494..60270 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5161_1	exon_5161_1	Tribonema minus UTEX_B_3156	exon	Contig_32 51494..51526 +
exon_5161_2	exon_5161_2	Tribonema minus UTEX_B_3156	exon	Contig_32 51736..51809 +
exon_5161_3	exon_5161_3	Tribonema minus UTEX_B_3156	exon	Contig_32 51924..51939 +
exon_5161_4	exon_5161_4	Tribonema minus UTEX_B_3156	exon	Contig_32 52352..52573 +
exon_5161_5	exon_5161_5	Tribonema minus UTEX_B_3156	exon	Contig_32 53493..53708 +
exon_5161_6	exon_5161_6	Tribonema minus UTEX_B_3156	exon	Contig_32 54523..54839 +
exon_5161_7	exon_5161_7	Tribonema minus UTEX_B_3156	exon	Contig_32 56151..56279 +
exon_5161_8	exon_5161_8	Tribonema minus UTEX_B_3156	exon	Contig_32 56793..56910 +
exon_5161_9	exon_5161_9	Tribonema minus UTEX_B_3156	exon	Contig_32 57636..57668 +
exon_5161_10	exon_5161_10	Tribonema minus UTEX_B_3156	exon	Contig_32 58465..58689 +
exon_5161_11	exon_5161_11	Tribonema minus UTEX_B_3156	exon	Contig_32 59243..59415 +
exon_5161_12	exon_5161_12	Tribonema minus UTEX_B_3156	exon	Contig_32 59479..60270 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5161	CDS_5161	Tribonema minus UTEX_B_3156	CDS	Contig_32 51494..51526 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5161	UTR3_5161	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_32 59621..60270 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348824	Trimin1\|348824\|estExt_Genemark1.C_Ctg_320010	Tribonema minus UTEX_B_3156	polypeptide	Contig_32 51494..59620 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_32:51494..60270+
coding sequence from alignment at Contig_32:51494..60270+

spliced messenger RNA

>mRNA_5161 ID=mRNA_5161|Name=jgi.p|Trimin1|348824|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2348bp|location=Sequence derived from alignment at Contig_32:51494..60270+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGCAGGAGTCTGTGGGATGGGTGGCCTGGGGCTACGCCGCGCACCA
CTGCAGCCCTCTCTCCGGGTACACAACCGCCAAAGAACTGTCCGAGCTCC
GGAGCAGTTTCGTGAGCTACGAGCAGCAGCAGCAGCAACAGCAGCAGCAG
CGCCAACGGCGCCTCGGCAGCGTCCGCTCCAGACGTCTGGTGCAGCGCGA
CGCAGGGTGCTCCGGGAAGGCTCAGGCCTGCGCGGTCGATGCGGGCTGCA
ATGCATGCCTGAAGGCCTACACGCCTGCGCAGGTTGGCGAGATTGAAAAT
GTGGCGGTGGGCTGTGCCGCCGTTGCATTCGAGGAGGTGATGGAAGGGTT
CCCCGCCGCGTGCACCGCGGGCAGCGGCGGCGCCGCTGCGCTGCTGCTGG
AGTGGATCGAGTGCCAGGCGGTGGCGGCGTGCATGAGCGCGACGTGCGCG
GGGCAGCGCGCGGCGTGCGGCGCGGACGCCGCGTGCGCCGCGTGCTACGC
AGCGCAGGTCCAGGTTGACTACCCGCAAGACTGCGCGGGCGCGTTCGGCG
CATTCCAGCAGCTCACGCGCGCGCCCCCATCCATGTCTGCGCACACACGC
ACACGCCAGGCGTACCCGCCGGACCTCGGCTGCGACTTCCTCAGCGCCGC
GTCGCCGCTGCGCGCCGTCGCCGTGTGCGAGTGGGAGTACCTGCACCCCG
ACGAGCCGTGCTACGCGGAGGGCAGCAGCGCTCCAACGCAGGCGCCCACC
GCGGCGCCGTCGCACGCGCCCACCGAGACGCCGTCATTTGCGATTACAGA
GACGCCGTCGTTTGCGGCGTCCGCGGCGCCCGCTGCCGCCGGCGGCAGCG
CGGCGCCCATCGCAGGTGGCGATGGCGCGAACCTGGAGCTGGATAACGTT
GGCGGCGACGCGGAGGGATTGGACGCTTGCAACAGCGTTACAGTACTTGC
ATCCAAGGTCAGCAGCGAGCGCAGCGAGCGCGCTCCGTCGCGCGACGTCT
TCAGCGAGAACGATGAGGGCTGCCAACAATGTCTGACGAAGGGTGGATTC
GATGCCGCAACGCTGGAGGCGCTGGGGGACCCTATTGACGGCTGCTTCTT
CCCCACGTTCGCGGAGGCGTTGCAGTCCGAAGTGGAGGCACTCTACCGGT
CGCGTCAGCTGTTCCCGCCCAAGTGCATCGACGTCACCTCGCAGTCCACG
CCGATGCTGACGGCGTACCTCGACTGCGCGGCGCGCGCGGCGTGCCAGGC
GGCGCTGTGCGGCGGCGCGCTCGCGGCGTGCGCGCGCGACGCGGACTGCG
CGCGCTGCTCCGCGCTCGTCGACCTCACGGCGCTGCGCACGCGCCCCGCG
ACGTGCGGCGACTGGATGACGGCGCTCAAGCAGGAGCTCCCCCAGGAGTG
CGCCAAGGGCGTCAAGCAGCAGCTCCCGCTGTACCGCCTCTTTGGGTGCT
ACTGGAACATTGACCACCCCGCGCAGCCGTGCCCCGGGCTCGCCACGGCG
GCGCCGTCGCTGGCGCCGTCGGAGGCGCCGACGTTTGCGCCCGTCGCCGT
GGCGGGCGCTGCTGCGGCTGTGGTGAGGGCTGCCGCGGCGGCGGCAGCAG
CAGCGCAGCGGCGGCAGCGCAGCGGCGTCCGATTGCGCGCCGCGGAGGGG
GAGGGGAGCGACGCGCATGAGCGCCAGCCGCGCTCGGGGGGCTGTTGAGC
CGTGCGATGGCCGCTGCGACCGCACACCATACATACCCTGCGGTATGCTT
ACCTGCCCCCGCAGATGGGGGACGCACGGCGGTGCATGCCCCCCCCCCCC
CCCCGGCCCCAGTGGTGTCGTGCCCATTAGTGAAATCGGCGTTTGGCTAT
GTCTGTCCCTTTTGAACCCGGTGCAACAGTGCTTTGCAGACCGCCGCCCC
TCGGCGAGTAGCAAATCGAAGCCTCTATTTACAGTACAAGGGCGCAGGTT
TACGTGCGAGGCCGGGGGAGGGGGCAGGGGTCGCTTGGGGGGCAGCACCC
CCAGTGCTCAGTACCCCAGGCCTCAGCGTGTTGCTGCGCATATGGTGTAT
GTCCCTCGATATTCTGTCATGACGTGCGGCGGGCCTTTGGTACAGGGGGT
CTCACGATCGTTCGGGCCCGCCCGACCCCGACTGCTGCAGCAGATGCGTT
CCGCCGTTTTTCGCTGGTTTCCCACTCGAGTGCCGAGCTGATTTGAAACT
TCGCCCTGACGCTGCCCTGCCTCTGTGCGCCCCACGGGAAGGGAGAACGC
GGTCTCCCGCTTGACAAGGCGCTGCTGCCTTGGAGATTTTGGCAGCTTGT
CGCTACACAATGAAAATACGCATGTTTATCGGAACACGCGCAGCAGGA

protein sequence of jgi.p|Trimin1|348824

>Trimin1|348824|estExt_Genemark1.C_Ctg_320010 ID=Trimin1|348824|estExt_Genemark1.C_Ctg_320010|Name=jgi.p|Trimin1|348824|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=566bp
MVQESVGWVAWGYAAHHCSPLSGYTTAKELSELRSSFVSYEQQQQQQQQQ
RQRRLGSVRSRRLVQRDAGCSGKAQACAVDAGCNACLKAYTPAQVGEIEN
VAVGCAAVAFEEVMEGFPAACTAGSGGAAALLLEWIECQAVAACMSATCA
GQRAACGADAACAACYAAQVQVDYPQDCAGAFGAFQQLTRAPPSMSAHTR
TRQAYPPDLGCDFLSAASPLRAVAVCEWEYLHPDEPCYAEGSSAPTQAPT
AAPSHAPTETPSFAITETPSFAASAAPAAAGGSAAPIAGGDGANLELDNV
GGDAEGLDACNSVTVLASKVSSERSERAPSRDVFSENDEGCQQCLTKGGF
DAATLEALGDPIDGCFFPTFAEALQSEVEALYRSRQLFPPKCIDVTSQST
PMLTAYLDCAARAACQAALCGGALAACARDADCARCSALVDLTALRTRPA
TCGDWMTALKQELPQECAKGVKQQLPLYRLFGCYWNIDHPAQPCPGLATA
APSLAPSEAPTFAPVAVAGAAAAVVRAAAAAAAAAQRRQRSGVRLRAAEG
EGSDAHERQPRSGGC*

mRNA from alignment at Contig_32:51494..60270+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5161 ID=mRNA_5161|Name=jgi.p|Trimin1|348824|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8777bp|location=Sequence derived from alignment at Contig_32:51494..60270+ (Tribonema minus UTEX_B_3156 )
ATGGTGCAGGAGTCTGTGGGATGGGTGGCCTGGGTGAGGGTATCCAAGTA
CATGGGTGCGGTGGCGACGACTCTGCGCACCCATACTGCCGGCAGGAAGC
GGCGCGGGCGACACAGATGGCGCAGCGTGCAGCGGCAGCAAGGGGCCAGC
GCAGGGGGGGGGGGGAGTCGGCGTGAGGTTTGCCTCAGCAAAGTCATCAT
CTTCTGATGCAGCAGAATGTTTCGCACCCGCTGCCGACACAGGGCTACGC
CGCGCACCACTGCAGCCCTCTCTCCGGGTACACAACCGCCAAAGAACTGT
CCGAGCTCCGGAGCAGGTCCCGGGGGGTCGCAGATCACCATGTCGCCTGC
CTCTGTGTATGCAGCGCGTGCTGGAGCAAACAAACTCAGGTGTTCATACT
CCGCTACGGAGCGCACTCTGCTTCCTCGAGTTTCGTGAGCTACGAGGTAA
GCCGTAGACGCCTGTAGCTCGAGCTGCTGGTTCATTCTCTCAACTTTGGC
AGCTTTTCTAGGATTTTCAGATTGGCGACTGCAGCTACTGCAGTTTTGCG
TCGTGGAGGTGAATTAGATCCAGACATCATCAAGAGTGCAATGCCTCTTA
TATTGCGCGTGTCTGTCAAGCCGACATTGTCCCAATCGACAAATCTTCCT
GCCCCCCCCCCCCCCCCCCCTGCTGTTTGCACACCTTGCCAGAGCGCATC
GTTTGTGCACAATCCTTACAGACATGCCACCGCCATCCTCTGGAGGTGGG
GCGGCGTGGACCACGGTGGTGGCAATGGTGACGGGCAGTGCTGTGCTGTA
CACTTGCATTCATTTCGGGCACCAGCAGCAGCCTGGCATCGCCTCGCAAC
CTCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCGCCAACGGCGCCTC
GGCAGCGTCCGCTCCAGACGTCTGGTGCAGCGCGACGCAGGGTGCTCCGG
GAAGGCTCAGGCCTGCGCGGTCGATGCGGGCTGCAATGCATGCCTGAAGG
CCTACACGCCTGCGCAGGTTGGCGAGATTGAAAATGTGGCGGTGGGCTGT
GCCGCCGTTGCATTCGAGGAGGTGATGGAAGTGAGTGTTTCCTACTCGTG
CGCTGGTGCATTGCATCTGCCTGAGATAGGATAGGGTTGGACAGCATACA
GCAAAGAGCCCCGATTATGGGATACAAATCACGCTGAAGCACGTGCTTCG
CGTTGAAAAGTGGCATCTGTCGACCATGAGTTGACATTGAACTTCAAAGT
CCATTAATCTGAAAGCTGAGGTCACGAGCTTCCATTTGAGCTAGGTTTCA
TTATTGAGGCCACAAATCTGCATTTGCGACAGGTATTAACGCCGCAGCAC
CAAATCAGGAACACTGCACCAACAGCAACGCGCCCTGTTGTGAGTCACTC
CTGAAAATAGTCTTAGAACAGCGTCAACCAGCCCTAAACCCACTGCAGGT
GGTTAGGGGCTTTCATGATGGTTGTAGGGCGAAGACTGACCAAGCATTGG
GCCCCACAAGCAGTGTTGCCTACTGACAAAGGCGGCTATACTGCACTGTT
CACCCCCCAACAACAATCAAATTTGGGCATTAGCACCATGTGTGTGTTTC
TCGGAGAAGAAAGGCATTCAGCATTCTCACTGTCCCAAATTTCATGTCAA
CAACTCCGCAATTGTCACACAACCACCATTGTGACAGTTTCTGAGGTCGG
GCAGCGGTGCGGCACATGTCAACGCAATCAGGTCCCCCTGAGTGTCGACA
TGGCAGTGTAGGCACAGCCATCTGCCCTTGTGATGCCTTCTGCCATTGCA
GCTGTTCTCAAATCTGCTCGACCACTTCCCTCGAGATGAGACGCCGACAA
GAGCCTACATAACGGAAGTGGTACACCCGCCCGCCATATGGTGTGCCGGA
CAGTAACGCCAGCCGCTGAAACCGTCATGCTACAATGATGGCAAGCTCTC
ACGCCAGCGCACGCCCACTCTCGCCACCACTACGCCTGCTGCGCCCCAGG
GGTTCCCCGCCGCGTGCACCGCGGGCAGCGGCGGCGCCGCTGCGCTGCTG
CTGGAGTGGATCGAGTGCCAGGCGGTGGCGGCGTGCATGAGCGCGACGTG
CGCGGGGCAGCGCGCGGCGTGCGGCGCGGACGCCGCGTGCGCCGCGTGCT
ACGCAGCGCAGGTCCAGGTTGACTACCCGCAAGACTGCGCGGGCGCGTTC
GGCGCATTCCAGCAGGTGCGCCGCGGAGCGCTGGCGCTGCTAACCCTAAC
CCTAACCCTAACCCTAGCCCTACCTTTGATTCATACCCGGGCCCTTCAGT
TCCCCCCTAGCCCTGACCCTTGGCCCTAACGGAAGGCGCAGGTGCGTGCG
CGGTCGCATGGCTGAGTGGCCAGCGCGACGCGCGTGCGCGGCTCGACGTG
CAACGTTCAACGTGCAGCGTGGCTGGCACGCGCTTGAGGTGCGCAGACAC
GAGCCGGCCTCGCTCAACACTGCACCCCAGGCCAGTGAAGGCAATCGTGC
AAGGGAGTATGGCGTTGTTTGCGTTCGTTGAATGCGCGCGGACATTTGCG
GAAGCGCGCACAGCGCATCCGACTGCAGGCGAGGCTACATGGCGCAGAGA
TGCGGCATGCACATTCTGCAGGGTCGCCCATCGCTGGAATTTTGGGTGCT
CCAGCAAGCAGCGCACAATGCTGCTGCTCTCTCAACTTCAACTCACACCT
CAACTGTGCGAACACTGCTGAGCTATGCGCACACATGCAGTTTCACAGAA
AACAGACCAGCTGCGTCTGGCGCACGCCTGACAGTACACTCGGGGTCCAG
CCTGTGAATCATGTGACAGCAGGCCACGCTCCCTTGCTGAACCGCAGCCG
CACCTCTCAGTGCTCAAGCCTTGTGCGCCCCCCGCTTCCGACAGCGATTG
GTATCACCTTTGGTGTACATGCACAGGTGCACTGCCTGGCGTCATGTTTA
TGGTGACGCAGTTGACTTCATATACTTCAAGCATGAAGCTATCACATTGG
TGCACACGCTGACCGCGGCCTCTGCGCAGCTCACGCGCGCGCCCCCATCC
ATGTCTGCGCACACACGCACACGCCAGGCGTACCCGCCGGACCTCGGCTG
CGACTTCCTCAGCGCCGCGTCGCCGCTGCGCGCCGTCGCCGTGTGCGAGT
GGGAGTACCTGCACCCCGACGAGCCGTGCTACGCGGAGGGCAGCAGCGCT
CCAACGCAGGCGCCCACCGCGGCGCCGTCGCACGCGCCCACCGAGACGCC
GTCATTTGCGATTACAGAGACGCCGTCGTTTGCGGCGTCCGCGGCGCCCG
CTGCCGCCGGCGGCAGCGCGGCGCCCATCGCAGGTGGCGATGGCGCGTGA
GGCATTGCGTTTTGCAGGAGCGTTGTGTGCTCGAGAGACAGCGCGGAGCG
CTGCACATTGCGAGGGAGGGTGCTGCGCGACGCTGTTGAGCAGTGGCGAA
CCACAGGGGGCGAGCGCGGCGTCAGCGCGTGCGCGCCGCCACTGCCCGAG
CACTGCAGCAAGCCAGGCTGTGGAGCTCAGTGCATTGCACCTGCGCAGCA
TGCCTGGGGCGCCCTTGTAGGGACGGGAGCAATGTTTGCAGACGCGCTTT
TGGGATGAAAGGTAGTTGTTCAGTGGCTGCACTAGTGGGGCGGCGAACTG
ATGCTGTGCACGCACAGCGTGTAGTGCGGTGTTGCTTTGTGTTGATGTGA
CCAGCGGAGCTTGTGTGAGGCGATGTGCCTGTTGCTTACACGCAGCAACA
GGGCCTGTCCGGCGCAATTTTTGTGCTGCGCTTCAGTGGTGGTGCGTCTG
GATCTTTACCGCGGAATCAGCGATGCGCAAGCAGCGGCGGCCTCTGTGCA
GTGCCCGCAATGGCGTGTTTTACGTGCTGTCAGTCCATACGTGGGGAACG
CCCGCTGCTGCCGGCTTTTTAAGCTGCATTTGGCAAGCTTGTTGAGATGA
GGCAGCCTGTGCGTCACATGGACGTGAAGGAGCCACAGTGCCTGCACTTT
ACTGTCCAGTCAAGTTTAACACTGAAGTACATGAAGTTTAATGATGGGAT
GCAGATGTTCTTGCACCCGTGGGGGGCTTGTTGTGTGCACTAAATGCCTG
TTTCGATCGCAAGTGTGTGTGCGGCTGCTCTGATCACTGTCGCAACATTG
ATAGTGATACAATTCTAGCAGATGCAGACTTCTGGATAAGTAGGCCAGCG
AAGCACAGCAGCTTGGTCAAATAGCCGTCGATAACGTATACGGTGGAAGA
CTGGACGCGGTTCCTTGAGAAGGGACAGCGTGCAGGGATGGATCTTTGAA
CATCACGCCGTCCTGGTGTGTGACAAAACGGTTTTTCGTTACAGAAAGGT
CGAGAGCTTCTATGACAGGCTATGCATGCAGACATCAGATGCACACATAC
TACTGACTGAGATTTGCGGCACACTATTTGAACTTGAGGATCCAGAAGCT
CTGGGACTCTGGGTCACACAGTGCCTGAGCAAAGCTAGCTTGATGTGAGA
TAGCCCCTCTGACTTGCCGCATGCAACCTGGAGCAGCACGCTCGTACACG
TGACAAGCGCATGATCTACAAAGCTGTCATGTTTGGCGTGTTTTGGCTTG
CTTCATGCGTGGCATGCAGAATTAAGCCGAGCCTAAATTGAGAGCATCTT
TCAGCAGGAACCTGGAGCTGGATAACGTTGGCGGCGACGCGGAGGGATTG
GACGCTTGCAACAGCGTTACAGTACTTGCATCCAAGGTCAGCAGCGAGCG
CAGCGAGCGCGCTCCGTCGCGCGACGTCTTCAGCGAGTACCTCGAGAAAA
GCCGAAAACTACCACTTGTGTCGTTGAAGGCACACAGGACGCCAGGGCGT
GCTGTCGGCGCGCAATGGGGTGCGCAATACTGCGAAGCATTTTGACGCAG
TACCGTGACAAGAACATATCATGCCTCAGCCCGACCATAGAATCTGCAGG
ATCGTGGGTTTTGACTTCTTCTGCAGTCATGTTTGGCGGTGCCGAGGTCT
GACGCGTGCTACATGTCCTCGCTGCTGTTGCAGAGAGCACCTTGTGCGCG
GAGACAGTCTGACGGTTCAGCGCAGATGATATTCCCATATCTCAGTCTTT
GGAAGGCTTTGGTGTTAACGGTCGTGGCAGTACCCTGGCACGCAGCCTCT
GCCGCAAGGTGGCAATGGTGGCGAGGCGACGAGCTGCCATCACCGCCAAC
AGCAGCAGCTTCAGGGGCGCAGAGAGCTATCGAAGCTGGCCATCCTGCGC
GGGAGTTGGCGCCGATCGACGCATGCGATAAGTATGCACGGATGTGCAGG
AACGATGAGGGCTGCCAACAATGTCTGACGAAGGGTGGATTCGATGCCGC
AACGCTGGAGGCGCTGGGGGACCCTATTGACGGCTGCTTCTTCCCCACGT
TCGCGGAGGCGTTGCAGGTAAGGCTGCAGTCAATCCTTGCTTCTTGGACA
GTGAAAGCCGAATGATCCGTAATGGTTCACGCAATTTATGTCGCGCAGTT
TCGGGCAAGCAGTAGCAACCGTGATGCAGTTTCAGGCAAGCAGTAGGCAA
CTGTGGTGCAGCCGCAAGTTCTCACGAAGGGCTTGCTGCACACTTCAAGT
GCTTGCTGCACGGCGAAAGCTGCGGTTTGGTCGCAGAGGACACATGCCCT
CGCCACATGTACGGGCAGCCTGCATCCTGCCACAGTTGATGCTTTTCTGT
GAGTAACCTTACATGAAGCTGATGAGAAACACCAACAGTGCGCGGCCAAC
TCCATGTGCGTTTACGTTACTTTTGGGGGTTGAATTGAATACACAGGTAT
TTACATGTCTGTGCTTTAGCGCCGGCGCACTTTACGGGATTGGTAGCAGG
ATCGGGCCCCAGCTCAAATTCAGTTGCACACACGCGCAGCACTGCGTGGG
ATGGTGCGTTGACACTTCATGCGTGCCGTGGTGGTGATGCTCAGCATGTG
GATGGCGCAAAACAGTTCAGCGTTTCCGGTTTTTACGAAGGTCATGTTGG
CCAACAATTTGCCCAGCAGCAGCGAAGTTCAGACTTTAGTTTCACACAAT
GCATGCGCATGGTTTCGGCTGATGATTGGAAGCGCGCATTACTGCACGGT
GCTGCATGCTCCAGTGTTGCCTGAAATTCTGCGCCTGAGCAGTCCGAAGT
GGAGGCACTCTACCGGTCGCGTCAGGTCGCACAGCAGCGCTGCGGTTGCC
AATTTCCACATCCACTGTGTCAGTATCAGAGAGACCTGATCGTGCGCAAG
TGCTGGCAACCGCTCCGCCGGGCACTGCGTGGAGCAGTACATGATAATGC
GCAAGCTCGCACGTGCAGCAGCGCTCAGAACGTGTGTGATTGTGCAGCAG
ACTCAGGCAGCCACCACGAGCGCGCAGTCCTTGCAGCTCTTCTGTTGAAC
CTGTGTGCTCCACCTTAGCGTTAGGGTTAGGGTTACGGTTATTGGCGGTG
CCTCCACTGAGAGGGAGGTGCTGCATTTGCAGCCTCCTCTGCTGCAATCG
CTGCGCCTGATTAGCCGGCATGGGCTACGACGTGTGATGTGTCTGGAATC
GCAGTCTGTCCTGTACTTCAACTTGAGGAAAGCGGGCTGGGCCGCTTGTC
GCAGTCTGCTGGCTCGGCAGTGCGGCTGCCACAGTCATGGTCGCAGTCAA
TGTTGAGCGGCAACGTCTGCAAGGAATCCCTCTGATGACGGCTGCACGCA
TCGTACCACTTTGGGTACATAGTCATGGAGAATAGCGCGGTACCCTAACA
GTTGGCTGGCTGCCCCGTGCCACCCACAGTATGATGACATTGTAGAGCGC
ACAGCGACTGATAGGTCGAGACCCCCCCCCCCCCCCCCCCCCCCTCCCCC
CCCTTAGTCTGGGGCGAGGCGCTGTGACCAATACCACCGCGCACCCGCAA
ACCATACACGCGCCCGAAGCGTGCTACACTTCCAACCCCCCCCCCTTCAC
CCCCCCCCCCCCCCCTCGCAGCTGTTCCCGCCCAAGTGCATCGACGTCAC
CTCGCAGTCCACGCCGATGCTGACGGCGTACCTCGACTGCGCGGCGCGCG
CGGCGTGCCAGGCGGCGCTGTGCGGCGGCGCGCTCGCGGCGTGCGCGCGC
GACGCGGACTGCGCGCGCTGCTCCGCGCTCGTCGACCTCACGGCGCTGCG
CACGCGCCCCGCGACGTGCGGCGACTGGATGACGGCGCTCAAGCAGGTAG
CGCATCCGCCGCAGCTGTGTACGCCTCTTCTGATGATTGTGATGATTCGT
ACCCTCAGCTACTGCGAGCGGCGACGGCCGCTGTGTGCGCTCGCACTTCC
AACCCTCCCCTTTTGCGATGAGACGTCAAGCTGTGGCGCGTGTGGGATAC
AGATGGATGAATGCCTCGCCAACCTGGCGCAGACGCAGACCAGCAGCGGT
GCGCACGCCAGGGCGGCCTGGCGGCGCGCTGCCGTCGCGACCTGACGCGG
CAGCTATGATGTGGCTCATAAACTTCAAGTTGATCTGCAATGGGAGAAAT
TGCAGCCACCAGCAGCCCCCGCTGCGTGCAGCATCTGGATGACGGCGCTT
GAGAGGCAGCGACATGACCCCCCCCCCCCATGATGCAGCTGACGTGCCCA
GGGCCGGGTAGGCATTCCGGGCTGGGGGGGGGGGGGGGGGGGCTTCGCCG
CGCCACGCGGTGACGATCGCAGCATCAGAACTGCATTCCCACAGTAGTGA
TGCTCCAGTCCTAATGCTCGCTTCCGCCGCCTCCGCCGTGCAAGCGCAGG
AGCTCCCCCAGGAGTGCGCCAAGGGCGTCAAGCAGCAGCTCCCGCTGTAC
CGCCTCTTTGGGTGCTACTGGAACATTGACCACCCCGCGCAGCCGTGCCC
CGGGCTCGCCACGGCGGCGCCGTCGCTGGCGCCGTCGGAGGCGCCGACGT
TTGCGCCCGTCGCCGTGGCGGGGTAGCACACGTGCGCTGCGGTGTATGCG
CTGATCGCTGACACGGCGCGTGCGCTCGCATCGAGCGCTGCTGCGGCTGT
GGTGAGGGCTGCCGCGGCGGCGGCAGCAGCAGCGCAGCGGCGGCAGCGCA
GCGGCGTCCGATTGCGCGCCGCGGAGGGGGAGGGGAGCGACGCGCATGAG
CGCCAGCCGCGCTCGGGGGGCTGTTGAGCCGTGCGATGGCCGCTGCGACC
GCACACCATACATACCCTGCGGTATGCTTACCTGCCCCCGCAGATGGGGG
ACGCACGGCGGTGCATGCCCCCCCCCCCCCCCCGGCCCCAGTGGTGTCGT
GCCCATTAGTGAAATCGGCGTTTGGCTATGTCTGTCCCTTTTGAACCCGG
TGCAACAGTGCTTTGCAGACCGCCGCCCCTCGGCGAGTAGCAAATCGAAG
CCTCTATTTACAGTACAAGGGCGCAGGTTTACGTGCGAGGCCGGGGGAGG
GGGCAGGGGTCGCTTGGGGGGCAGCACCCCCAGTGCTCAGTACCCCAGGC
CTCAGCGTGTTGCTGCGCATATGGTGTATGTCCCTCGATATTCTGTCATG
ACGTGCGGCGGGCCTTTGGTACAGGGGGTCTCACGATCGTTCGGGCCCGC
CCGACCCCGACTGCTGCAGCAGATGCGTTCCGCCGTTTTTCGCTGGTTTC
CCACTCGAGTGCCGAGCTGATTTGAAACTTCGCCCTGACGCTGCCCTGCC
TCTGTGCGCCCCACGGGAAGGGAGAACGCGGTCTCCCGCTTGACAAGGCG
CTGCTGCCTTGGAGATTTTGGCAGCTTGTCGCTACACAATGAAAATACGC
ATGTTTATCGGAACACGCGCAGCAGGA

Coding sequence (CDS) from alignment at Contig_32:51494..60270+

>mRNA_5161 ID=mRNA_5161|Name=jgi.p|Trimin1|348824|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1698bp|location=Sequence derived from alignment at Contig_32:51494..60270+ (Tribonema minus UTEX_B_3156 )
ATGGTGCAGGAGTCTGTGGGATGGGTGGCCTGGGGCTACGCCGCGCACCA
CTGCAGCCCTCTCTCCGGGTACACAACCGCCAAAGAACTGTCCGAGCTCC
GGAGCAGTTTCGTGAGCTACGAGCAGCAGCAGCAGCAACAGCAGCAGCAG
CGCCAACGGCGCCTCGGCAGCGTCCGCTCCAGACGTCTGGTGCAGCGCGA
CGCAGGGTGCTCCGGGAAGGCTCAGGCCTGCGCGGTCGATGCGGGCTGCA
ATGCATGCCTGAAGGCCTACACGCCTGCGCAGGTTGGCGAGATTGAAAAT
GTGGCGGTGGGCTGTGCCGCCGTTGCATTCGAGGAGGTGATGGAAGGGTT
CCCCGCCGCGTGCACCGCGGGCAGCGGCGGCGCCGCTGCGCTGCTGCTGG
AGTGGATCGAGTGCCAGGCGGTGGCGGCGTGCATGAGCGCGACGTGCGCG
GGGCAGCGCGCGGCGTGCGGCGCGGACGCCGCGTGCGCCGCGTGCTACGC
AGCGCAGGTCCAGGTTGACTACCCGCAAGACTGCGCGGGCGCGTTCGGCG
CATTCCAGCAGCTCACGCGCGCGCCCCCATCCATGTCTGCGCACACACGC
ACACGCCAGGCGTACCCGCCGGACCTCGGCTGCGACTTCCTCAGCGCCGC
GTCGCCGCTGCGCGCCGTCGCCGTGTGCGAGTGGGAGTACCTGCACCCCG
ACGAGCCGTGCTACGCGGAGGGCAGCAGCGCTCCAACGCAGGCGCCCACC
GCGGCGCCGTCGCACGCGCCCACCGAGACGCCGTCATTTGCGATTACAGA
GACGCCGTCGTTTGCGGCGTCCGCGGCGCCCGCTGCCGCCGGCGGCAGCG
CGGCGCCCATCGCAGGTGGCGATGGCGCGAACCTGGAGCTGGATAACGTT
GGCGGCGACGCGGAGGGATTGGACGCTTGCAACAGCGTTACAGTACTTGC
ATCCAAGGTCAGCAGCGAGCGCAGCGAGCGCGCTCCGTCGCGCGACGTCT
TCAGCGAGAACGATGAGGGCTGCCAACAATGTCTGACGAAGGGTGGATTC
GATGCCGCAACGCTGGAGGCGCTGGGGGACCCTATTGACGGCTGCTTCTT
CCCCACGTTCGCGGAGGCGTTGCAGTCCGAAGTGGAGGCACTCTACCGGT
CGCGTCAGCTGTTCCCGCCCAAGTGCATCGACGTCACCTCGCAGTCCACG
CCGATGCTGACGGCGTACCTCGACTGCGCGGCGCGCGCGGCGTGCCAGGC
GGCGCTGTGCGGCGGCGCGCTCGCGGCGTGCGCGCGCGACGCGGACTGCG
CGCGCTGCTCCGCGCTCGTCGACCTCACGGCGCTGCGCACGCGCCCCGCG
ACGTGCGGCGACTGGATGACGGCGCTCAAGCAGGAGCTCCCCCAGGAGTG
CGCCAAGGGCGTCAAGCAGCAGCTCCCGCTGTACCGCCTCTTTGGGTGCT
ACTGGAACATTGACCACCCCGCGCAGCCGTGCCCCGGGCTCGCCACGGCG
GCGCCGTCGCTGGCGCCGTCGGAGGCGCCGACGTTTGCGCCCGTCGCCGT
GGCGGGCGCTGCTGCGGCTGTGGTGAGGGCTGCCGCGGCGGCGGCAGCAG
CAGCGCAGCGGCGGCAGCGCAGCGGCGTCCGATTGCGCGCCGCGGAGGGG
GAGGGGAGCGACGCGCATGAGCGCCAGCCGCGCTCGGGGGGCTGTTGA