mRNA_5132 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A835ZFL4_9STRA (EsV-1-66 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL4_9STRA) HSP 1 Score: 895 bits (2314), Expect = 0.000e+0 Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 1
Query: 1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLPLDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVIA 1380
MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLPLDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVIA
Sbjct: 1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLPLDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVIA 460
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A835YYF9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF9_9STRA) HSP 1 Score: 713 bits (1840), Expect = 1.910e-256 Identity = 351/441 (79.59%), Postives = 400/441 (90.70%), Query Frame = 1
Query: 58 VQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLPLDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVIA 1380
+QELTV+QK LSPLSDPGTL+AY I+DT HG+VLEVPKFWGL+NL++LGA +VED QF+GV+L+++DVVS ITQLRPHQVEA ++IMKAFS+EYGGG LLVLPCGYGKTVTALHVAAKMGVR LIVCHTDVLV+QWAAAI+QYFPNARVG+IKQN F+V+DKTHVIASLKSLAVR+YDM+ AGC LM+ DE HH+ ALQLSRAVANAGC+YRLGLSATP RPDGLSDFL WSIGE+VYEV RPPAD+LRV+AVM+ DGPV TK++ + GKDVSNIAGMINL+TD++N+RADMRQ+VAAAWI LCA K R IIVLADRISLLRDLDRRVRD++TT F+ GAAKKAER AAG AQVVFASYG+AAEGLDL LDTL+ TPRSGEGVITQ VGRIQRG GRPPL++D VDAVPLF MF+KR+RVY KLGAK+TKYDE R VIA
Sbjct: 1 MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLKLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVIA 441
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A835YWZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ8_9STRA) HSP 1 Score: 660 bits (1702), Expect = 4.000e-235 Identity = 332/461 (72.02%), Postives = 392/461 (85.03%), Query Frame = 1
Query: 1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAF-SKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLPLDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVIA 1380
+L TCVRVPFT + +Q +C+Q+LTV QKALS L+DPGTL+AY T+ GKVLEVPK WGL NL +LGA +VED Q GV L DEDVVS IT LRPHQ+EAT++I++AF S EYGGG LLVLPCGYGKT+TALHV AKM ++ L+VCHTDVLV QWA AI QYFPNARVG I+QN +V DKTH+IASLKSLA+R+YDM +AGC++++VDE H ALQLSRA++NAGC+YRLGLSATPTRPDGLS FL WSIGE+VYEV RPPADDLRV+AV++ +GPV K I +GGK +SN+AGMINLLTDMT ARAD+RQ+VAAAWI+LCASK RK+I+L+DRI LLRDLDRRVRD+VTT F+ G AKKAERA A D+QVVFASYG+AAEGLD+ +DTL+L +PRSGE VITQ VGRIQRGRGR PLVID+VD+V F MFAKRLRVYK LGA +TKYDE R+VI+
Sbjct: 5 VLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAY----TIRGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS 461
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A835Z7P3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P3_9STRA) HSP 1 Score: 535 bits (1377), Expect = 1.050e-185 Identity = 275/461 (59.65%), Postives = 348/461 (75.49%), Query Frame = 1
Query: 1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVT-TSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVI 1377
+L TC+RVP T +Q + EL++ Q LS L+DP TL+AY I++T G + +PK W LDNL+KLG + Q LED+DVVS I QLRPHQ+EAT+++ KAF+ YGGG LLVL CG GKTVTALH+AA + ++ LI+ HTDVL +QWAAAI+QY+P ARVG I+QNTF+V+DKTHVIASLKS+A R YDM AGC L++VDE H + +LQL RAVAN GCKYRLGLSATP R DGLS FL W IG +VY++ R P DLR+F +M+ GPV K++ + GK V+NIAGMINL+T+ T+ RA MRQ+VAAAWI LCA K RKIIVL+DRI LL+ L++ ++D V TS L G+AK+A R A +QV+ ASYG+A+EG D+P LDT+IL TPRSG VITQ VGRIQR G+ PLVIDIVD+V LF MFAKR +VY+ LG +TKY+E R+++
Sbjct: 5 VLQTCLRVPLTPEIQQ--LIAELSIEQNQLSALADPSTLVAYTIEETAAGTFVNLPKMWALDNLDKLGVTKIIGKQLPVTMLEDKDVVSTIRQLRPHQIEATKAVTKAFNTRYGGGALLVLSCGMGKTVTALHIAATLKLKCLIITHTDVLASQWAAAIMQYYPKARVGKIQQNTFDVEDKTHVIASLKSVATRQYDMAGAGCGLLVVDEVHRIASLQLHRAVANVGCKYRLGLSATPDRADGLSPFLKWGIGPVVYQLERDPTPDLRIFGIMLDSGPVYPKVVRKNGKSVANIAGMINLMTEDTD-RAKMRQQVAAAWIRLCAKKGRKIIVLSDRIDLLKGLEKLMKDHVDGTSLLIGSAKRAVRDVAHLSQVILASYGIASEGFDVPSLDTIILLTPRSGANVITQCVGRIQRPGGKSPLVIDIVDSVGLFKGMFAKRCKVYEHLGGTITKYNERREIL 462
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A835YY40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY40_9STRA) HSP 1 Score: 430 bits (1106), Expect = 5.630e-145 Identity = 243/460 (52.83%), Postives = 318/460 (69.13%), Query Frame = 1
Query: 1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVI 1377
+LTT VRVP T + LT+ QK LS LS PGTLIA++ ++ LEVPK WGL E V+D Q G + ++T LRPHQ A +I AF+ E+GGGG+LVLPCG+GKT+TA+ +A +MGVR LIVCHT VL+ QW AAI Q+ P+A +G ++QN F VD THVIASLKS+A+RDY GC L+ +DEAHH+ AL LS+AVA G ++RLGLSATPTR DGLS F+ WS+G ++E R LRVFAV + GPV+TK + R GK+V+NI+GM+NLL + A A RQ + AAWI LCASK RK++VLADR+ LLRDL +++ + + F+ GA K +RAAA +AQ++ +YG+ AEG D P LDT++LTTPRSG+ V+TQ VGR+ R G+ PLVID VD VPLF+ M KR++VY+KL A +T YDE R+ +
Sbjct: 2 ILTTTVRVPDTPEVRAA-----LTLQQKELSALSAPGTLIAFSTEEA---GWLEVPKMWGLQRYE------VDDRQ--GPHIAVTTAPLSVT-LRPHQAAALTAIESAFAAEHGGGGVLVLPCGFGKTMTAIALAQRMGVRCLIVCHTGVLMEQWRAAIAQFVPDAVIGEMQQNKFVVDGCTHVIASLKSVALRDYPPH--GCGLLCIDEAHHISALLLSKAVAKLGTRWRLGLSATPTRADGLSPFMTWSLGPTLFEQEREAKTGLRVFAVRVTTGPVKTKTLRRAGKEVANISGMMNLLVKKSVA-ATRRQELVAAWIRLCASKGRKVLVLADRLELLRDLSKQMGE-FSFGFMTGAVKVKDRAAAAEAQILLGTYGVVAEGFDEPRLDTVVLTTPRSGQSVMTQVVGRLLRDGGKSPLVIDFVDDVPLFVGMHWKRMKVYRKLQASVTCYDEQRNEV 440
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A835Z102_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z102_9STRA) HSP 1 Score: 407 bits (1046), Expect = 8.980e-136 Identity = 245/466 (52.58%), Postives = 306/466 (65.67%), Query Frame = 1
Query: 1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVS----AITQLRPHQVEATESIMKAFSKEYGGGG-LLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDG---PVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRD 1371
+LT+ +RVP T + Q+ LTV QKALS L+ P TL+AY + L L VPK +GL N V+D Q + E VV A+ LR HQV+ATE++M A ++ GGG +L LPCGYGKTVTAL VA ++GVR LI+ +T VL QW A I + P A VG IKQN F+VD THV+ASLKSLA R Y + GC L IVDEAHH+ A +SRA+A+ G ++RLGLSATP R DGLS +L WSIG + Y + R A LRV+A+ + PVRT I +GG+ V+N AGMINLL +A A+ RQ + A WI LC SK RK++VL+DRISLL+DL R+ + T F+ GAA+K ER AA A V+ AS+ AAEGLD+P LDTL L TPRSGE VITQ VGR+ R GR PLV+D VD V LF MF KR RVY+ LGA +T+YD R+
Sbjct: 2 LLTSTLRVPDTAATRQA-----LTVTQKALSALAQPSTLVAYEV---LEPGWLAVPKQYGLQNFS-----DVDDRQTQA-----ETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVH--GCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLL-QKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRL-GTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARN 445
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A835ZHB6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHB6_9STRA) HSP 1 Score: 372 bits (955), Expect = 2.250e-122 Identity = 214/415 (51.57%), Postives = 264/415 (63.61%), Query Frame = 1
Query: 157 LEVPKFWGLDNLEK---LGAVSVEDHQFEGVRLEDEDVVSAITQ------LRPHQVEATESIMKAF-SKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENR 1368
+EVPK WGL+ L GA + E V +A T LRPHQ EA ++ S GGGG++VLPCG+GKTV AL + +MGVR IV HT VL QW AAI QY P+A VG I+ + F+V+ +THVIASL+S+A R+Y GC LMI DE H V A LS AVA GC+YR+GLSATP R DGL FL W IG +V+E R DLR AV + GPVRT IS+GG+ V NI+ M +L D + RA RQ +A AWI LC K RK++VL+DR++LL DL R+ D T FL G+AK A+R AA V+ ASYG AAEGLD+P LDT++L TPRSGE VITQ VGR+ R G PPLV+D+VD VPLF M AKR R+ + +G +T DE R
Sbjct: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPH--GCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGD-YTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELR 412
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: Q8QNK6_ESV1K (EsV-1-66 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNK6_ESV1K) HSP 1 Score: 222 bits (566), Expect = 1.290e-63 Identity = 152/407 (37.35%), Postives = 222/407 (54.55%), Query Frame = 1
Query: 163 VPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGC-ELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDS--VTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRG--RPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDEN 1365
VP+ +G+ N + + ED Q G L ++ LR QVE E ++A +GG ++ L CG+GKT +L V+ + +I+ HT L+ QW I Q+ NA VG+++++ +V ++HVIA ++S++ R+Y + LMIVDEAHHVCA QLSR V GCK RLGLSATP R DG++ FL SIG I V R +++ V V + GP T + R GK N+A MIN L D+ + + R + I+ ++ R +IVL+DR + L+ + + ++ V F+ G K A+ A +V+ A+Y +EGLD+P LDT +L TPRS I Q GRI R + P VID VD +F KR Y KL A + +DE+
Sbjct: 57 VPRMYGV-NFIQAENLPFEDRQNHGESLPH---IAFSGSLRERQVEPVEKTIRALETVHGG--VMSLYCGFGKTTCSLKVSCHFKKKTIILVHTTALLEQWKERIEQFVTNASVGVLQRDNIDVTGRSHVIALMQSVSRRNYPRELLDSFGLMIVDEAHHVCAAQLSRCVTKVGCKLRLGLSATPFRKDGMTQFLFDSIGPICARVDRG-YEEVLVDVVYVTSGPSETVCMKRKGKQSPNLAKMINNLCDVNDPAGESRTELVIETIVNALAEHRHVIVLSDRRNHLKVMGSMLAETAGVEVGFMVGGIKPADIEAVSARRVIMATYAYCSEGLDIPSLDTCVLATPRSD---IVQCCGRILRYHPSKQVPRVIDFVDDSVVFQGQARKRNMYYSKLRAFINYFDED 453
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: D8LP98_ECTSI (EsV-1-66 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP98_ECTSI) HSP 1 Score: 220 bits (561), Expect = 6.800e-63 Identity = 156/407 (38.33%), Postives = 220/407 (54.05%), Query Frame = 1
Query: 163 VPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGC-ELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDS--VTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRP--PLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDEN 1365
VP+ +G+ N + G + ED Q G L +S LR QVE E ++A E GG++ L CG+GKT +L V+ + +I+ HT L+ QW I Q+ NA VG+++++ +V ++HVIA ++S++ R+Y + LMIVDEAHHVCA QLSR V GCK RLGLSATP R DG++ FL SIG I V R +++ V V + GP + R G+ NIA MIN L DM + + R + I+ ++ R IIVL+DR + L+ + + ++ V F+ G + A+ AA +V+ A+Y +EGLD+P LDT + TPRS I Q GRI R P VID VD +F KR Y KL A M DE+
Sbjct: 56 VPRMYGV-NFIQAGNLPCEDRQKPGESLPH---ISFSGTLRECQVEPVEKTIRAL--ETAHGGVMSLYCGFGKTTCSLKVSCHFKKKTIILVHTTALLEQWKERIEQFVTNASVGVLQRDKIDVTGRSHVIALMQSVSRRNYPRELLDSFGLMIVDEAHHVCATQLSRCVTKVGCKLRLGLSATPFRKDGMTQFLFDSIGPICARVDRE-YEEVFVDVVYVTSGPSEMVCVKRKGRLSPNIAKMINNLCDMHDPDGEFRTGLVIETIVNALAEDRHIIVLSDRRNHLKVMGSMLAETAGVEVGFMVGGTRPADIEAASACRVIMATYAYCSEGLDIPSLDTCVFATPRSD---IVQCCGRILRYHPSKQIPRVIDFVDNSVVFHGQARKRAMYYSKLCAFMNYLDED 452
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Match: A0A6C0JAU8_9ZZZZ (Helicase ATP-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JAU8_9ZZZZ) HSP 1 Score: 204 bits (519), Expect = 8.370e-57 Identity = 140/405 (34.57%), Postives = 221/405 (54.57%), Query Frame = 1
Query: 151 KVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGC-ELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYD 1359
K + +PKF+G+ +K G E+ +G D+ V +LR +Q+E ++ GGGLL L CG GKTV +L++ A++ + L+V + + L+ QW I Q+ P+ +VG I+++ V+D +A LKSLA R Y+ T L+IVDE H++ + S+A+ KY LGLSATPTR DGL+ + W IG+I Y+ D++V ++ K I K IA MIN + + + + ++ + K R+I++L++RISLL++L+ R++D+ F G K ER + + QV+ A++ +A E LD+ L+TLIL TP+S I Q VGRI R + L++DIVD F + KRL YKK K++ ++
Sbjct: 54 KQMILPKFYGI---KKFG--EAENRVPDG----DDIDVDFDGELRDNQLEPLNKTLEVLKTT--GGGLLSLHCGAGKTVLSLYIIAQLKKKTLVVVNQEFLMDQWIERIKQFLPHLKVGKIQRDKVQVEDYDISLAMLKSLATRKYEKDTFDSFGLVIVDECHNIATKEYSKALQKINSKYMLGLSATPTRTDGLTKVIKWYIGDIFYKSVVSDKFDVQVEQYIIKSADKDYKRIDLNWKKKPLIARMINNVAEYSERIDFIADKIKE----ITKDKSRQILLLSERISLLKELELRIKDTCDYGFFIGGMKSWERELSMEKQVILATFHIAREALDIKSLNTLILATPKSN---IVQAVGRILRKKQGKHLIVDIVDDFSTFKNQRFKRLNYYKKKDYKVSTFE 440 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174791 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5132 ID=mRNA_5132|Name=jgi.p|Trimin1|174791|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1383bp|location=Sequence derived from alignment at Contig_117:419759..421141- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTCACAACTTGCGTCAGGGTGCCTTTCACCGAGAGCGCGGAGCAGAGback to top protein sequence of jgi.p|Trimin1|174791 >Trimin1|174791|e_gw1.117.79.1 ID=Trimin1|174791|e_gw1.117.79.1|Name=jgi.p|Trimin1|174791|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=461bp MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGback to top mRNA from alignment at Contig_117:419759..421141- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5132 ID=mRNA_5132|Name=jgi.p|Trimin1|174791|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1383bp|location=Sequence derived from alignment at Contig_117:419759..421141- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_117:419759..421141- >mRNA_5132 ID=mRNA_5132|Name=jgi.p|Trimin1|174791|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1383bp|location=Sequence derived from alignment at Contig_117:419759..421141- (Tribonema minus UTEX_B_3156 )back to top |