mRNA_5113 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|135847
Unique NamemRNA_5113
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: A0A836CM12_9STRA (Histidine kinase-like ATPase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM12_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 8.550e-152
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
Query:    1 NQMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            NQMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES
Sbjct:    1 NQMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 213          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: A0A835Z671_9STRA (Histidine kinase-like ATPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z671_9STRA)

HSP 1 Score: 311 bits (796), Expect = 5.680e-105
Identity = 150/213 (70.42%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 NQMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            N MLSYVNH+VRNPLNVIKGMV+ T+LTL QC LPPEL TC+ DLT+ASRACDFLEHIVS ILV+QR EAGAL+LNL P+R+SDIV DM+ A+ HKMEE K V L+++CP DIT VVD F LKQ+LLN LSN+MKYT  G+IT+ V +H+ GE+TIGV DTG+GIP++ +KLIF+AHVQL+A+D+GRHG HGLGLYLVSMLA  M WTV   S
Sbjct:   10 NSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHS 222          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: A0A6N1NHF0_9VIRU (Histidine kinase n=1 Tax=Tupanvirus deep ocean TaxID=2126984 RepID=A0A6N1NHF0_9VIRU)

HSP 1 Score: 152 bits (384), Expect = 2.410e-39
Identity = 89/221 (40.27%), Postives = 127/221 (57.47%), Query Frame = 1
Query:    4 QMLSYVNHKVRNPLNVIKGMVDLTVLTLTQ---------CQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            QML YVNH++RNPLNVIKG+V+ T+  + +         C       T + DL+  S +C+ LEHIV+ IL I + ++G L L+ +  +I   V D+   I  K++E + + L V    D+ +  D +R+KQ+LLN L+NA+KYT  G+ITI+++   G      V DTG GI D  K  IF+   Q N  D  R+G  GLGLYL  ML + MG  +  ES
Sbjct:  398 QMLGYVNHEIRNPLNVIKGLVEFTLHNMNKLDENKLDRICMDKMFYDTIVSDLSTVSGSCNMLEHIVTDILDINKLDSGKLELDNKWVKIRSFVNDISKTISQKIDEKQTIKLDVVYEHDLVLYFDIYRMKQILLNFLTNAVKYTLKGSITIKIEELNG-NYRFSVTDTGRGIKDEAKFRIFQPFNQTNPEDASRYGGIGLGLYLCKMLTERMGGKIGFES 617          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: A0A6N1NZN1_9VIRU (Histidine kinase n=1 Tax=Tupanvirus soda lake TaxID=2126985 RepID=A0A6N1NZN1_9VIRU)

HSP 1 Score: 149 bits (375), Expect = 4.350e-38
Identity = 87/221 (39.37%), Postives = 126/221 (57.01%), Query Frame = 1
Query:    4 QMLSYVNHKVRNPLNVIKGMVDLTVLTLTQ---------CQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            QML YVNH++RNPLNVIKG+V+ T+  +++         C       T + DL+  S +C+ LEHIV+ IL I + ++G L L+ +  +I   + D+   I  K++E + + L V    D+ +  D +R+KQ+LLN L+NA+KYT  G I I+++   G      V DTG GI D  K  IF+   Q N  D  R+G  GLGLYL  ML + MG  +  ES
Sbjct:  398 QMLGYVNHEIRNPLNVIKGLVEFTLHNISKLDQNKVDRICMDKMFYDTIVSDLSTVSGSCNMLEHIVTDILDINKLDSGKLELDNKWVKIRTFMNDISKTISQKIDEKQTIKLEVIYEYDLVLYFDIYRMKQILLNFLTNAVKYTIKGKIIIKIEELNG-NYRFSVTDTGRGIKDDAKSRIFQPFNQTNPEDSSRYGGIGLGLYLCKMLTERMGGKIGFES 617          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: A0A3G4ZXL8_9VIRU (Histidine kinase n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZXL8_9VIRU)

HSP 1 Score: 145 bits (366), Expect = 7.400e-37
Identity = 85/227 (37.44%), Postives = 131/227 (57.71%), Query Frame = 1
Query:    1 NQMLSYVNHKVRNPLNVIKGMVDLTVLTL----------TQCQLPP-ELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADI---TVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            N+ML YVNH++RNPLNVI GMVD+T+ TL          T  Q+   ELS+ I DL  A  +C+ L HIV+ +L I++ E   L+++     +      +   I+ K+ E   V+  ++   ++    + +D+ RL Q+LLNL+ N++K+T  G I ++++++    +   V DTG GIPD  K  IF+   Q +  D  R+G  GLGLYL +ML +CMG T+  ES
Sbjct:  379 NKMLGYVNHEIRNPLNVINGMVDITIETLNNKIEKNTGGTNVQIQKDELSSVISDLYTAEGSCNMLRHIVNDVLDIRKLEDDKLVIDNEYINLDLFCKSIHKTIIPKLREKIDVSFSMEFKDNLENENIYIDKNRLSQILLNLIFNSIKFTIVGNIILKIRKNNS-NIIFEVNDTGRGIPDEAKSYIFQPFHQADKEDSSRYGGIGLGLYLCNMLVNCMGGTINFES 604          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: UPI001559572C (response regulator n=1 Tax=Bowmanella denitrificans TaxID=366582 RepID=UPI001559572C)

HSP 1 Score: 115 bits (287), Expect = 6.190e-26
Identity = 68/211 (32.23%), Postives = 119/211 (56.40%), Query Frame = 1
Query:   10 LSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALV-VDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            L+ ++H++R P+N + GM+ L    + Q  L  +    +     AS++   L  +++ +L   + EAG + ++L P  +  ++ ++         +N +  L  +D     +V+VD  RLKQ+L+NL+SNA+K+T AGT+T+ VKR   GE+  GV+DTG GI ++Q+K IF++  Q + +   R G  GLGL +   L + MG  ++  S
Sbjct:  761 LANMSHEIRTPMNAVIGMLQL----INQTSLTDKQQDYLSKAQSASKS---LLQLLNDVLDYSKIEAGKIDIDLHPADLESLIRELTVVFSGSQMKNSVELLYDIDTNLPKSVLVDSLRLKQVLINLVSNALKFTMAGTVTVVVKRQSNGEIQFGVKDTGIGITEAQQKKIFQSFSQADPSTARRFGGSGLGLVISRRLTNLMGGELQFTS 964          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: A0A2V7SN72_9BACT (Histidine kinase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7SN72_9BACT)

HSP 1 Score: 113 bits (283), Expect = 1.690e-25
Identity = 81/213 (38.03%), Postives = 111/213 (52.11%), Query Frame = 1
Query:    4 QMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYT-AAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            Q L+ ++H++R PLN I G  +L  L L     P ++     DL    R  D L  I+  IL   R +AG L +      ++D+VAD  + +  +M+   +  +V   P D  V  D  R +Q+LLNLLSNA K+T A G I IE     G EV I VRDTG GI  +Q + IF   VQ++A+   R G  GLGL +   LA  MG T+   S
Sbjct:  388 QFLAMMSHELRTPLNAIGGFTELLELGLHGPVTPEQVE----DLGRIRRNKDLLLSIIGDILEFARADAGVLSVKSEAVSVADLVADATDLVGAQMQAKGICFIVGPVPPDAVVRADRERAQQVLLNLLSNATKFTDAGGEIRIETTTGAG-EVRIEVRDTGRGIAAAQLEAIFEPFVQVDASLTRRTGGTGLGLAIARKLAVAMGGTLDARS 595          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: UPI00166A911A (ATP-binding protein n=2 Tax=Dyella nitratireducens TaxID=1849580 RepID=UPI00166A911A)

HSP 1 Score: 112 bits (281), Expect = 3.470e-25
Identity = 71/217 (32.72%), Postives = 121/217 (55.76%), Query Frame = 1
Query:   10 LSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKM-VALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEV--KRHEGG----EVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            L+ ++H++R PL+ +   V+L  LT         L T       AS + D L  +V  +L + + EA  LML+  P  +  +V DM   I H+++E  + + L ++ P D+ V++D  R++Q+++NLL+NA+K+T  G++T++V   R  G     ++++ V DTG GIP  Q   +F A+VQ ++    R+G  GLGL +   L + MG T+   S
Sbjct:  326 LAVMSHEIRVPLSAVLSSVELLKLTRVNKNQRELLVT-------ASSSADALLRLVDDVLDLSKLEADGLMLDSTPTDVGKLVQDMVQIIRHRVDEKGLQLNLNINVPEDVCVLLDVTRIQQVMINLLTNAIKFTNQGSVTLDVALNRSSGDAASRKLSVSVCDTGIGIPPEQHTRLFHAYVQADSTIARRYGGTGLGLSISRQLIELMGGTITLRS 535          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: UPI0003703D3C (response regulator n=1 Tax=Hoeflea sp. 108 TaxID=1116369 RepID=UPI0003703D3C)

HSP 1 Score: 112 bits (279), Expect = 6.980e-25
Identity = 75/217 (34.56%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    4 QMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADIT--VVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVT---IGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            + L+ ++H++R P+N + GM +L    L +  L P+  T   D+ + S   + L  I++ IL   + +AG L+L+  P+ +S+ + D+   I  + +E K + L+V    D+    V D  R++Q++ NLL NA+K+T AG + ++V     GE T   I V DTG GIP+++ KL+F    Q++A+   RH   GLGL + S L D MG T+  ES
Sbjct:  443 EFLANMSHEIRTPMNGVLGMAEL----LAKSDLDPKQRT-FTDIIVKSG--NALLTIINDILDFSKIDAGQLVLDPVPFNLSEAIEDVATLISTRAKE-KDLELIVRMQPDLKHLYVGDVGRIRQIVTNLLGNAVKFTDAGHVLVDVTGQHAGEATKLRIAVTDTGIGIPEAKLKLVFDKFSQVDASSTRRHEGTGLGLAITSRLVDMMGGTIGVES 651          
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Match: A0A501PMM8_9PROT (Histidine kinase n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PMM8_9PROT)

HSP 1 Score: 111 bits (278), Expect = 8.920e-25
Identity = 71/214 (33.18%), Postives = 119/214 (55.61%), Query Frame = 1
Query:    4 QMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCP--ADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTVRCES 639
            + L+ ++H++R PLN + GM  L    L Q +L          +  + R+   L  I++ IL + R E+G + L +  + +  ++ +  + I ++   +K +  VVD P   D+T V D  R+KQML+NLL NA+K+T AGTI++++   + G +   VRDTG GIP  Q++ IF    Q++   V ++G  GLGL +   LA+ MG  +  +S
Sbjct:  372 EFLANMSHEIRTPLNGVLGMCQL----LEQTKLDSRQREYAHTIMSSGRS---LLAIINDILDLSRIESGQMKLKMSDFNVLTVIKESMDTISYQAM-SKSLKTVVDVPKDCDLTYVGDPVRIKQMLVNLLGNAVKFTDAGTISLQLSLLDDGSLHFRVRDTGPGIPPDQQEAIFERFRQVDGTSVRQYGGTGLGLPICKSLAEMMGGEIGVKS 577          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|135847 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CM12_9STRA8.550e-152100.00Histidine kinase-like ATPase (Fragment) n=1 Tax=Tr... [more]
A0A835Z671_9STRA5.680e-10570.42Histidine kinase-like ATPase n=2 Tax=Tribonema min... [more]
A0A6N1NHF0_9VIRU2.410e-3940.27Histidine kinase n=1 Tax=Tupanvirus deep ocean Tax... [more]
A0A6N1NZN1_9VIRU4.350e-3839.37Histidine kinase n=1 Tax=Tupanvirus soda lake TaxI... [more]
A0A3G4ZXL8_9VIRU7.400e-3737.44Histidine kinase n=1 Tax=Edafosvirus sp. TaxID=248... [more]
UPI001559572C6.190e-2632.23response regulator n=1 Tax=Bowmanella denitrifican... [more]
A0A2V7SN72_9BACT1.690e-2538.03Histidine kinase n=1 Tax=Gemmatimonadetes bacteriu... [more]
UPI00166A911A3.470e-2532.72ATP-binding protein n=2 Tax=Dyella nitratireducens... [more]
UPI0003703D3C6.980e-2534.56response regulator n=1 Tax=Hoeflea sp. 108 TaxID=1... [more]
A0A501PMM8_9PROT8.920e-2533.18Histidine kinase n=1 Tax=Emcibacter nanhaiensis Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_117contigContig_117:364678..365316 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|135847|gw1.117.25.1
DescriptionPAS fold
COG categoryT
Max annot lvl28211|Alphaproteobacteria
EggNOG OGsCOG5002@1|root,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,2TWD2@28211|Alphaproteobacteria,43RR9@69277|Phyllobacteriaceae
Evalue1.14e-25
Seed ortholog1116369.KB890024_gene4083
Hectar predicted targeting categoryother localisation
TranscriptId136169
TrackFilteredModels1
ProteinId135847
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|135847gene_5113Tribonema minus UTEX_B_3156 geneContig_117 364678..365316 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5113_1exon_5113_1Tribonema minus UTEX_B_3156 exonContig_117 364678..365316 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5113CDS_5113Tribonema minus UTEX_B_3156 CDSContig_117 364678..365316 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|135847Trimin1|135847|gw1.117.25.1Tribonema minus UTEX_B_3156 polypeptideContig_117 364678..365316 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5113 ID=mRNA_5113|Name=jgi.p|Trimin1|135847|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=639bp|location=Sequence derived from alignment at Contig_117:364678..365316- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AACCAAATGCTTTCCTATGTAAATCACAAGGTTCGAAACCCCCTGAACGT
CATAAAAGGCATGGTGGATTTGACTGTGCTCACACTGACGCAGTGTCAGC
TACCGCCCGAGCTCAGCACCTGCATATGGGACCTGACGATAGCCTCGAGA
GCGTGCGATTTTCTGGAGCACATAGTGAGCGGCATTCTGGTCATTCAAAG
ATGGGAAGCGGGTGCTCTGATGCTCAACTTGCGACCATACCGGATCAGTG
ACATTGTAGCTGACATGCAAAATGCCATCGTCCATAAAATGGAGGAGAAT
AAGATGGTCGCTCTGGTTGTTGATTGTCCGGCGGATATCACAGTCGTGGT
CGATGAGTTTCGACTGAAGCAGATGTTGCTTAACCTTTTGTCAAACGCCA
TGAAGTACACAGCAGCGGGAACTATTACAATTGAAGTGAAGAGGCATGAA
GGTGGTGAGGTCACTATCGGCGTACGTGATACTGGTGCGGGCATACCTGA
CTCTCAGAAAAAATTGATTTTCCGAGCACATGTTCAGCTAAACGCCAATG
ACGTCGGCAGACACGGATATCACGGCCTCGGACTGTACCTAGTGAGCATG
CTCGCCGATTGCATGGGGTGGACTGTCAGGTGTGAGTCG
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protein sequence of jgi.p|Trimin1|135847

>Trimin1|135847|gw1.117.25.1 ID=Trimin1|135847|gw1.117.25.1|Name=jgi.p|Trimin1|135847|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp
NQMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASR
ACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEEN
KMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHE
GGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSM
LADCMGWTVRCES
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mRNA from alignment at Contig_117:364678..365316-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5113 ID=mRNA_5113|Name=jgi.p|Trimin1|135847|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=639bp|location=Sequence derived from alignment at Contig_117:364678..365316- (Tribonema minus UTEX_B_3156 )
AACCAAATGCTTTCCTATGTAAATCACAAGGTTCGAAACCCCCTGAACGT CATAAAAGGCATGGTGGATTTGACTGTGCTCACACTGACGCAGTGTCAGC TACCGCCCGAGCTCAGCACCTGCATATGGGACCTGACGATAGCCTCGAGA GCGTGCGATTTTCTGGAGCACATAGTGAGCGGCATTCTGGTCATTCAAAG ATGGGAAGCGGGTGCTCTGATGCTCAACTTGCGACCATACCGGATCAGTG ACATTGTAGCTGACATGCAAAATGCCATCGTCCATAAAATGGAGGAGAAT AAGATGGTCGCTCTGGTTGTTGATTGTCCGGCGGATATCACAGTCGTGGT CGATGAGTTTCGACTGAAGCAGATGTTGCTTAACCTTTTGTCAAACGCCA TGAAGTACACAGCAGCGGGAACTATTACAATTGAAGTGAAGAGGCATGAA GGTGGTGAGGTCACTATCGGCGTACGTGATACTGGTGCGGGCATACCTGA CTCTCAGAAAAAATTGATTTTCCGAGCACATGTTCAGCTAAACGCCAATG ACGTCGGCAGACACGGATATCACGGCCTCGGACTGTACCTAGTGAGCATG CTCGCCGATTGCATGGGGTGGACTGTCAGGTGTGAGTCG
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Coding sequence (CDS) from alignment at Contig_117:364678..365316-

>mRNA_5113 ID=mRNA_5113|Name=jgi.p|Trimin1|135847|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=639bp|location=Sequence derived from alignment at Contig_117:364678..365316- (Tribonema minus UTEX_B_3156 )
AACCAAATGCTTTCCTATGTAAATCACAAGGTTCGAAACCCCCTGAACGT
CATAAAAGGCATGGTGGATTTGACTGTGCTCACACTGACGCAGTGTCAGC
TACCGCCCGAGCTCAGCACCTGCATATGGGACCTGACGATAGCCTCGAGA
GCGTGCGATTTTCTGGAGCACATAGTGAGCGGCATTCTGGTCATTCAAAG
ATGGGAAGCGGGTGCTCTGATGCTCAACTTGCGACCATACCGGATCAGTG
ACATTGTAGCTGACATGCAAAATGCCATCGTCCATAAAATGGAGGAGAAT
AAGATGGTCGCTCTGGTTGTTGATTGTCCGGCGGATATCACAGTCGTGGT
CGATGAGTTTCGACTGAAGCAGATGTTGCTTAACCTTTTGTCAAACGCCA
TGAAGTACACAGCAGCGGGAACTATTACAATTGAAGTGAAGAGGCATGAA
GGTGGTGAGGTCACTATCGGCGTACGTGATACTGGTGCGGGCATACCTGA
CTCTCAGAAAAAATTGATTTTCCGAGCACATGTTCAGCTAAACGCCAATG
ACGTCGGCAGACACGGATATCACGGCCTCGGACTGTACCTAGTGAGCATG
CTCGCCGATTGCATGGGGTGGACTGTCAGGTGTGAGTCG
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